View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17576_low_65 (Length: 237)
Name: NF17576_low_65
Description: NF17576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17576_low_65 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 224127 - 224346
Alignment:
| Q |
1 |
gcgcacgcattcaaaatttagcatttaagaaactaattgatgcaattattttctgcatgtgttatcaagaattagttaaccttgatgacaaagacactga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
224127 |
gcgcacgcattcaaaatttagcatttaagaaactaattgatgcaattattttctgcatgtgttatcaagaattagttaaccttgatgacaaagacactga |
224226 |
T |
|
| Q |
101 |
aatagtttcggatcatggaccttgacaaggatttttaggatgttttgttttatggagatagagatatggctttagatatgtatgtagtactaatgcagca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
224227 |
aatagtttcggatcatggaccttgacaaggatttttaggatgttttgttttatggagatagagatatggctttagatatgtatgtagtactaatgcagca |
224326 |
T |
|
| Q |
201 |
gtgtttttgcttacaaggaa |
220 |
Q |
| |
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|||||||||||||||||||| |
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| T |
224327 |
gtgtttttgcttacaaggaa |
224346 |
T |
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