View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17578_high_10 (Length: 306)

Name: NF17578_high_10
Description: NF17578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17578_high_10
NF17578_high_10
[»] chr8 (1 HSPs)
chr8 (22-306)||(32324737-32325021)


Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 22 - 306
Target Start/End: Original strand, 32324737 - 32325021
Alignment:
Q  22 tgtgctttacgctatatacatatatagtttggtgaatttcttaacttgtaaatgcatttgcaaaaatagctccaacttttcaaccatgtgccaataatca 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32324737 tgtgctttacgctatatacatatatagtttggtgaatttcttaacttgtaaatgcatttgcaaaaatagctccaacttttcaaccatgtgccaataatca 32324836  T
Q  122 atatttttcactataagtatcagtgtatcacatacatatataattagcaaacataagcgcactaggtagtggctactatatatatcattataatgaagct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32324837 atatttttcactataagtatcagtgtatcacatacatatataattagcaaacataagcgcactaggtagtggctactatatatatcattataatgaagct 32324936  T
Q  222 aataaactagctagactaaaacaagcttaatccatgatatacatgtaccatttgagacaatatgctgtgaacgtggtggggacag 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32324937 aataaactagctagactaaaacaagcttaatccatgatatacatgtaccatttgagacaatatgctgtgaacgtggtggggacag 32325021  T

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