View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1757_high_16 (Length: 242)
Name: NF1757_high_16
Description: NF1757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1757_high_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 45691601 - 45691372
Alignment:
| Q |
12 |
attctcttcatgctgtaataagaaggtttatca-ctcttaaattctcagccttcacatcgcccacttcatttgcagatgtcattgcctcaatctttttga |
110 |
Q |
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| T |
45691601 |
attctcttcatgctgtaataagaaggtttatcatctcttacactctcagccttcacatcgcccacttcatttgcagatgtcattgcctcaatcttcttga |
45691502 |
T |
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| Q |
111 |
tttcatcatctgcctctcttgaagatcctttagcagaggatcaagtgctccttatcatcatttgtagcaactttttcctcaatactgataggagcagaat |
210 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
45691501 |
tttcatcatctgcctctcttgaagatcctttagc--aggatcaagtgctccttatcatcatttgtagcaactttttcctcaatactgattggagcagaat |
45691404 |
T |
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| Q |
211 |
attatgcttttttgaggtctgatttaacttcc |
242 |
Q |
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||| |||||||||||||||||||||||||||| |
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| T |
45691403 |
attctgcttttttgaggtctgatttaacttcc |
45691372 |
T |
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