View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1757_high_4 (Length: 458)

Name: NF1757_high_4
Description: NF1757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1757_high_4
NF1757_high_4
[»] chr8 (9 HSPs)
chr8 (16-451)||(5719034-5719469)
chr8 (16-451)||(5686918-5687353)
chr8 (143-299)||(5666062-5666218)
chr8 (353-451)||(5665944-5666042)
chr8 (355-447)||(5652166-5652258)
chr8 (140-231)||(5652558-5652649)
chr8 (16-54)||(5666242-5666280)
chr8 (355-447)||(5601497-5601589)
chr8 (355-447)||(5639031-5639123)
[»] chr4 (4 HSPs)
chr4 (139-230)||(106141-106232)
chr4 (355-449)||(166763-166857)
chr4 (69-101)||(14964306-14964338)
chr4 (45-85)||(31262910-31262950)
[»] scaffold0013 (1 HSPs)
scaffold0013 (139-231)||(90397-90492)
[»] chr3 (4 HSPs)
chr3 (139-231)||(12135539-12135631)
chr3 (61-119)||(3027073-3027132)
chr3 (50-112)||(48322283-48322345)
chr3 (52-103)||(24313526-24313578)
[»] chr7 (2 HSPs)
chr7 (139-232)||(13054763-13054859)
chr7 (61-113)||(32699337-32699389)
[»] chr2 (3 HSPs)
chr2 (52-113)||(1334963-1335025)
chr2 (45-114)||(25622498-25622568)
chr2 (52-112)||(24389702-24389763)
[»] chr1 (3 HSPs)
chr1 (50-111)||(34861289-34861351)
chr1 (42-83)||(27934796-27934839)
chr1 (75-119)||(52765408-52765452)
[»] chr6 (1 HSPs)
chr6 (61-112)||(13445819-13445871)
[»] chr5 (1 HSPs)
chr5 (57-120)||(23023591-23023654)


Alignment Details
Target: chr8 (Bit Score: 396; Significance: 0; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 16 - 451
Target Start/End: Complemental strand, 5719469 - 5719034
Alignment:
Q  16 ataatgaactaaatcaattgcatggtatatttttaaaataattctttaatttagaatgcttaaagagtgctccgggatactcgttaacgagacccttttt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  5719469 ataatgaactaaatcaattgcatggtatatttttaaaataattctttaatttaaaatgcttaaagagtgccccggaatactcgttaacgagacccttttt 5719370  T
Q  116 taaatgacatgacaatgaatgaaaataatgcagatatatgtacctcttgaaggaagccaatcaaatattgtacagacatcatgggctctaatagctttga 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5719369 taaatgacatgacaatgaatgaaaataatgcagatatatgtacctcttgaaggaagccaatcaaatattgtacagacatcatgggctctaatagctttga 5719270  T
Q  216 ttcatgctggccaggtaccttcacctgttattttaaattaaaattcatgctttgtcactatctaactacaaatgaatgttgtgtnnnnnnnnctactaat 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||    
T  5719269 ttcatgctggccaggtaccttcacctgttattttaaattaaaattcatgctttgtcactatctaactacaaatgaatgttgtgtaaaaaaaactactaat 5719170  T
Q  316 gaatacataaaaatatggttatttctatatatatctgtacaggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaac 415  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5719169 gaatacataaaaatatggttatttttatatatatctgtacaggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaac 5719070  T
Q  416 aagaggagggtgattggccccaacaggttcatctca 451  Q
    ||||||||||||||||||||||||||||||||||||    
T  5719069 aagaggagggtgattggccccaacaggttcatctca 5719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 16 - 451
Target Start/End: Complemental strand, 5687353 - 5686918
Alignment:
Q  16 ataatgaactaaatcaattgcatggtatatttttaaaataattctttaatttagaatgcttaaagagtgctccggg-atactcgttaacgagaccctttt 114  Q
    |||||||||||||| ||||||||||||||| || |||||||||  |||||||| |||||||||||||||  ||||| | |||||||||| ||||||||||    
T  5687353 ataatgaactaaattaattgcatggtatatattaaaaataattacttaatttacaatgcttaaagagtgtaccggggacactcgttaacaagaccctttt 5687254  T
Q  115 ttaaatgacatgacaatgaatgaaaataatgcagatatatgtacctcttgaaggaagccaatcaaatattgtacagacatcatgggctctaatagctttg 214  Q
    | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  5687253 taaaatgatatgacaattaaggaaaataatgcagatatatgtacctcttgaaggaagccaatcaaatattgtacagacagcatgggctctaatggctttg 5687154  T
Q  215 attcatgctggccaggtaccttcacctgttattttaaattaaaattcatgctttgtcactatctaactacaaatgaatgttgtgtnnnnnnnnctactaa 314  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||        |||||||    
T  5687153 attcatgccggccaggtaccttcacctgtcattgtaaattaaaattcatgctttgttactatataactacaaatgaatgttgtgt-aaaaaaactactaa 5687055  T
Q  315 tgaatacataaaaatatggttatttctatatatatctgtacaggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaa 414  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5687054 tgaatacatataaatatggttatttctatatatatctgtacaggcggagagagaccctactcctcttcatcgtgctgtaaaattaatcatcaatctccaa 5686955  T
Q  415 caagaggagggtgattggccccaacaggttcatctca 451  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5686954 caagaggagggtgattggccccaacaggtttatctca 5686918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 5666218 - 5666062
Alignment:
Q  143 atgcagatatatgtacctcttgaaggaagccaatcaaatattgtacagacatcatgggctctaatagctttgattcatgctggccaggtaccttcacctg 242  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||      
T  5666218 atgcagatatatgcacctcttgaaggaagccaatcaaatattgtacagacatcatgggctctaatggctttgattcatgccggccaggtaccttcgccgt 5666119  T
Q  243 ttattttaaattaaaattcatgctttgtcactatctaactacaaatgaatgttgtgt 299  Q
    ||| | |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  5666118 ttactgtaaattaaaattcatgcttttttactatctaactacaaatgaatgttgtgt 5666062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 353 - 451
Target Start/End: Complemental strand, 5666042 - 5665944
Alignment:
Q  353 tacaggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaacaagaggagggtgattggccccaacaggttcatctca 451  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  5666042 tacaggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaactaaaggagggtgattggccccaacaggttcatctca 5665944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 447
Target Start/End: Complemental strand, 5652258 - 5652166
Alignment:
Q  355 caggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaacaagaggagggtgattggccccaacaggttcat 447  Q
    |||||||||| |||| | ||| ||||||||||||||| ||||||||||||||||  ||||  ||| |||||||| ||||||||||||||||||    
T  5652258 caggcggagatagacccaactactcttcatcgtgctgcaaaattaatcatcaattcccaattagaagagggtgactggccccaacaggttcat 5652166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 5652649 - 5652558
Alignment:
Q  140 ataatgcagatatatgtacctcttgaaggaagccaatcaaatattgtacagacatcatgggctctaatagctttgattcatgctggccaggt 231  Q
    |||||||||| |||||||||||| |||||| | | |||||||||||| || ||  |||||||||| || | ||| |||||||||||||||||    
T  5652649 ataatgcagacatatgtacctctcgaaggaggtcgatcaaatattgttcaaactgcatgggctcttatgggtttaattcatgctggccaggt 5652558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 5666280 - 5666242
Alignment:
Q  16 ataatgaactaaatcaattgcatggtatatttttaaaat 54  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  5666280 ataatgaactaaattaattgcatggtatatttttaaaat 5666242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 447
Target Start/End: Original strand, 5601497 - 5601589
Alignment:
Q  355 caggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaacaagaggagggtgattggccccaacaggttcat 447  Q
    |||||| ||| |||| ||||||||||||||||||||| ||| ||||| ||||||   |||| ||| || || |  ||||||||||||||||||    
T  5601497 caggcgaagatagaccctactcctcttcatcgtgctgcaaatttaattatcaattcgcaactagaagatggcggctggccccaacaggttcat 5601589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 447
Target Start/End: Complemental strand, 5639123 - 5639031
Alignment:
Q  355 caggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaacaagaggagggtgattggccccaacaggttcat 447  Q
    |||||| ||| |||| ||||||||||||||||||||| ||| ||||| ||||||   |||| ||| || || |  ||||||||||||||||||    
T  5639123 caggcgaagatagaccctactcctcttcatcgtgctgcaaatttaattatcaattcgcaactagaagatggcggctggccccaacaggttcat 5639031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 106141 - 106232
Alignment:
Q  139 aataatgcagatatatgtacctcttgaaggaagccaatcaaatattgtacagacatcatgggctctaatagctttgattcatgctggccagg 230  Q
    |||||||||||||||||||||||| |||||||||| ||| ||| ||||||| ||  |||||||||| || | ||| |||||||| |||||||    
T  106141 aataatgcagatatatgtacctctcgaaggaagccgatccaatgttgtacatactgcatgggctcttatgggtttaattcatgccggccagg 106232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 449
Target Start/End: Original strand, 166763 - 166857
Alignment:
Q  355 caggcggagagagacgctactcctcttcatcgtgctgtaaaattaatcatcaatctccaacaagaggagggtgattggccccaacaggttcatct 449  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||  ||||||||  |||    || || ||  ||||||||||||||||||||||    
T  166763 caggcagagagagaccctactcctcttcatcgtgctgcaaaattgctcatcaattcccagttggaagaaggcaattggccccaacaggttcatct 166857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 14964338 - 14964306
Alignment:
Q  69 gaatgcttaaagagtgctccgggatactcgtta 101  Q
    |||||||||||||||||||||||| ||||||||    
T  14964338 gaatgcttaaagagtgctccgggacactcgtta 14964306  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 31262950 - 31262910
Alignment:
Q  45 tttttaaaataattctttaatttagaatgcttaaagagtgc 85  Q
    |||| |||||||||  |||||||||||||||||||||||||    
T  31262950 ttttaaaaataattacttaatttagaatgcttaaagagtgc 31262910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 90492 - 90397
Alignment:
Q  139 aataatgcagatatatgtacctcttgaaggaagcc---aatcaaatattgtacagacatcatgggctctaatagctttgattcatgctggccaggt 231  Q
    |||||||||| ||||||||||||||||||||||||   | |||||| ||||||| ||  |||||||||| || | ||| |||||||||||||||||    
T  90492 aataatgcaggtatatgtacctcttgaaggaagccaggagtcaaatgttgtacaaactgcatgggctcttatgggtttaattcatgctggccaggt 90397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 12135631 - 12135539
Alignment:
Q  139 aataatgcagatatatgtacctcttgaaggaagccaatcaaatattgtacagacatcatgggctctaatagctttgattcatgctggccaggt 231  Q
    |||||||||||||||  ||||||||||||||||   ||||||| ||||||||||  ||||||||||  | | ||| |||||||||||||||||    
T  12135631 aataatgcagatatacatacctcttgaaggaagtagatcaaatcttgtacagactgcatgggctcttctgggtttaattcatgctggccaggt 12135539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 3027073 - 3027132
Alignment:
Q  61 ttaatttagaatgcttaaagagtgctccgg-gatactcgttaacgagacccttttttaaa 119  Q
    |||||||||||||||||||||||||||||| |  |||||||||| |||||||| ||||||    
T  3027073 ttaatttagaatgcttaaagagtgctccggaggcactcgttaacaagacccttatttaaa 3027132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 48322283 - 48322345
Alignment:
Q  50 aaaataattctttaatttagaatgcttaaagagtgctccgggatactcgttaacgagaccctt 112  Q
    |||||||||  ||| ||||||||||||||||||| | || | |||||||||||| ||||||||    
T  48322283 aaaataattacttattttagaatgcttaaagagtacccctgaatactcgttaacaagaccctt 48322345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 24313578 - 24313526
Alignment:
Q  52 aataattctttaatttagaatgcttaaagagtgctccg-ggatactcgttaac 103  Q
    ||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||    
T  24313578 aataattgtttaatttagaatgtttaaagagtgccccgaggacactcgttaac 24313526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 13054763 - 13054859
Alignment:
Q  139 aataatgcagatatatgtacctcttgaaggaagc---caatcaaatattgtacagacatcatgggctctaatagctttgattcatgctggccaggta 232  Q
    ||||||||||| |||| |||||||||||||||||   ||||||||| ||||||| ||  |||||| ||| ||   ||| ||| ||||||||||||||    
T  13054763 aataatgcagaaatatatacctcttgaaggaagccagcaatcaaatgttgtacaaactgcatggggtctcatgagtttaatttatgctggccaggta 13054859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 32699389 - 32699337
Alignment:
Q  61 ttaatttagaatgcttaaagagtgctccgggatactcgttaacgagacccttt 113  Q
    ||||||||| ||| ||||||||||| || | |||||||||||| |||||||||    
T  32699389 ttaatttagtatgtttaaagagtgccccagaatactcgttaacaagacccttt 32699337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 1334963 - 1335025
Alignment:
Q  52 aataattctttaatttagaatgcttaaagagtgctccgg-gatactcgttaacgagacccttt 113  Q
    ||||||| || ||||| | ||||||||||||||| |||| ||||||||||||| |||||||||    
T  1334963 aataattattaaatttgggatgcttaaagagtgccccggagatactcgttaacaagacccttt 1335025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 25622568 - 25622498
Alignment:
Q  45 tttttaaaataattctttaatttagaatgcttaaagagtgctccggga-tactcgttaacgagaccctttt 114  Q
    |||| |||||||||  ||||||||||||| |||||||||||  |||||  |||||||||| ||||||||||    
T  25622568 ttttaaaaataattacttaatttagaatgtttaaagagtgcatcgggagcactcgttaacaagaccctttt 25622498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 24389702 - 24389763
Alignment:
Q  52 aataattctttaatttagaatgcttaaagagtgctccg-ggatactcgttaacgagaccctt 112  Q
    |||||||  ||||||||| ||||||||||||||| ||| ||||||| |||||| ||||||||    
T  24389702 aataattacttaatttagcatgcttaaagagtgccccgtggatacttgttaacaagaccctt 24389763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 34861289 - 34861351
Alignment:
Q  50 aaaataattctttaatttagaatgcttaaagagtg-ctccgggatactcgttaacgagaccct 111  Q
    |||||||||  |||||||||||||||||||||||| | |||||  |||||||||| |||||||    
T  34861289 aaaataattacttaatttagaatgcttaaagagtgcccccggggcactcgttaacaagaccct 34861351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 27934796 - 27934839
Alignment:
Q  42 atatttttaaa--ataattctttaatttagaatgcttaaagagt 83  Q
    |||||||||||  |||||| ||||||||||||||||||||||||    
T  27934796 atatttttaaataataattatttaatttagaatgcttaaagagt 27934839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 52765408 - 52765452
Alignment:
Q  75 ttaaagagtgctccgggatactcgttaacgagacccttttttaaa 119  Q
    |||||||||||||||||  |||||||||||||||| || ||||||    
T  52765408 ttaaagagtgctccggggcactcgttaacgagacctttatttaaa 52765452  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 13445819 - 13445871
Alignment:
Q  61 ttaatttagaatgcttaaagagtgctcc-gggatactcgttaacgagaccctt 112  Q
    ||||||||| ||||||||||||||| || |||| |||||||||| ||||||||    
T  13445819 ttaatttagcatgcttaaagagtgcaccggggacactcgttaacaagaccctt 13445871  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 23023654 - 23023591
Alignment:
Q  57 ttctttaatttagaatgcttaaagagtgctcc-gggatactcgttaacgagacccttttttaaat 120  Q
    |||||||||| |||||||||||||||||| || |||  |||||||||| |||||||| |||||||    
T  23023654 ttctttaatt-agaatgcttaaagagtgccccgggggcactcgttaacaagacccttatttaaat 23023591  T

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