View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17580_high_14 (Length: 337)
Name: NF17580_high_14
Description: NF17580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17580_high_14 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 10 - 319
Target Start/End: Original strand, 4698011 - 4698320
Alignment:
| Q |
10 |
gcagagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4698011 |
gcagagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcg |
4698110 |
T |
|
| Q |
110 |
agattttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttaga |
209 |
Q |
| |
|
||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4698111 |
agattctattgggggcagcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttaga |
4698210 |
T |
|
| Q |
210 |
tgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctc |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4698211 |
tgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctc |
4698310 |
T |
|
| Q |
310 |
gggtatttag |
319 |
Q |
| |
|
|||||||||| |
|
|
| T |
4698311 |
gggtatttag |
4698320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 319
Target Start/End: Complemental strand, 4863181 - 4862875
Alignment:
| Q |
13 |
gagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcgaga |
112 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
4863181 |
gagatgattctcgtttatgacttcatgcaacgtggcactctccgtgaatatctttatggttcggataatgaacctcttacttggaagaagagacttgaga |
4863082 |
T |
|
| Q |
113 |
ttttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagatga |
212 |
Q |
| |
|
|| | ||||| || ||||| || |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4863081 |
ttctgttgggggcagcaagggggttacattatcttcatgctggtgtaaagcacaatatcatacaccgtgacgtgaagagtaccaacatattgttggatga |
4862982 |
T |
|
| Q |
213 |
taaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctcggg |
312 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||| || |
|
|
| T |
4862981 |
aaaatgggtggctaaggtgtctgatttcgggttatcaaaagtgggaccaacaggaatgtctatcactcacgtcagcaccgtggtgaagggtagtcttgga |
4862882 |
T |
|
| Q |
313 |
tatttag |
319 |
Q |
| |
|
||||||| |
|
|
| T |
4862881 |
tatttag |
4862875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 12 - 317
Target Start/End: Original strand, 4784658 - 4784963
Alignment:
| Q |
12 |
agagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcgag |
111 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||| ||| |||||||||| ||||| || |||||| |||||||||| |||||| |||| || ||| |
|
|
| T |
4784658 |
agagatgattctcgtttatgacttcatgcaacgtggcagtctatgtgaatatctttatggatcagataacaaacctcttacctggaagcagaggcttgag |
4784757 |
T |
|
| Q |
112 |
attttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagatg |
211 |
Q |
| |
|
||| |||| ||||| || | || | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |
|
|
| T |
4784758 |
attctattaggtgccgcgcgggggttgcattatctgcatgcaggtgcgaagcacaatatcatacaccgtgacgtgaagagtacaaacatattgttggatg |
4784857 |
T |
|
| Q |
212 |
ataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctcgg |
311 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
4784858 |
aaaaatgggtggctaaggtttctgattttgggttatcaaaagtgggacctacagggatgtcgatgacccatgtcagcactatggtgaaaggtagtctcgg |
4784957 |
T |
|
| Q |
312 |
gtattt |
317 |
Q |
| |
|
|||||| |
|
|
| T |
4784958 |
gtattt |
4784963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 12 - 317
Target Start/End: Original strand, 4817087 - 4817392
Alignment:
| Q |
12 |
agagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcgag |
111 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||| ||| |||||||||| ||||| || |||||| |||||||||| |||||| |||| || ||| |
|
|
| T |
4817087 |
agagatgattctcgtttatgacttcatgcaacgtggcagtctatgtgaatatctttatggatcagataacaaacctcttacctggaagcagaggcttgag |
4817186 |
T |
|
| Q |
112 |
attttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagatg |
211 |
Q |
| |
|
||| |||| ||||| || | || | |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
4817187 |
attctattaggtgccgcgcgggggttgcattatttgcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtacaaacatattgttggatg |
4817286 |
T |
|
| Q |
212 |
ataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctcgg |
311 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
4817287 |
aaaaatgggtggctaaggtttctgattttgggttatcaaaagtgggacctacagggatgtcgatgacccatgtcagcactatggtgaaaggtagtctcgg |
4817386 |
T |
|
| Q |
312 |
gtattt |
317 |
Q |
| |
|
|||||| |
|
|
| T |
4817387 |
gtattt |
4817392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 10 - 306
Target Start/End: Original strand, 4846842 - 4847138
Alignment:
| Q |
10 |
gcagagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcg |
109 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| ||||||| ||||| ||||| ||||||||||||||||||| |||||||||| ||||| | ||||||| |
|
|
| T |
4846842 |
gcagagatgattctagtttatgacttcatgcaacgtggtactctcagtgaacatctctatggttcggataatgaacctcttaggtggaatcaaagactcg |
4846941 |
T |
|
| Q |
110 |
agattttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttaga |
209 |
Q |
| |
|
||||| |||| ||||| ||||| || | |||||||||||| |||||||||||||||||||||||| ||||| || |||||||| ||||||||||| || |
|
|
| T |
4846942 |
agattctattaggtgcagcaagggggttgaattatcttcatgaaggtgcgaagcacaatatcatacatcgtgacgttaagagtacaaacatattgttgga |
4847041 |
T |
|
| Q |
210 |
tgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagt |
306 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || || ||||| || || ||||||| ||||||||||||| |
|
|
| T |
4847042 |
tgaaaaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaaccgggatatcaatgactcatgtaagcactatggtgaagggtagt |
4847138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 10 - 306
Target Start/End: Original strand, 4712887 - 4713183
Alignment:
| Q |
10 |
gcagagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcg |
109 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||||| | ||||| |
|
|
| T |
4712887 |
gcagagatgattcttgtttatgactttatggaacatggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagactta |
4712986 |
T |
|
| Q |
110 |
agattttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttaga |
209 |
Q |
| |
|
| ||| |||| |||| ||||| || | ||||||||||||| |||||||||||| ||||||||||||||||| || |||||||| || |||||||| || |
|
|
| T |
4712987 |
atattctattatgtgcagcaaggggattgcattatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttgga |
4713086 |
T |
|
| Q |
210 |
tgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagt |
306 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||| || |||||||||| ||||||||||||| |
|
|
| T |
4713087 |
tgaaaaatgggtggctaaggtttctgatttcggtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagt |
4713183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 94 - 317
Target Start/End: Complemental strand, 4652731 - 4652508
Alignment:
| Q |
94 |
tggaagaagagactcgagattttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagta |
193 |
Q |
| |
|
||||||||||| || |||||| |||||||| | || ||||| || ||||||||||||||| | ||| ||||| || ||||||||||| |||||||| | |
|
|
| T |
4652731 |
tggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgcagaggtgaaacacaagataatacaccgtgacgtgaagagca |
4652632 |
T |
|
| Q |
194 |
ccaacatattgttagatgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaa |
293 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||||| ||| | ||||| | ||||| || ||||| | |
|
|
| T |
4652631 |
ccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacaaggatgtctacaacccatgttagcacgat |
4652532 |
T |
|
| Q |
294 |
ggtgaagggtagtctcgggtattt |
317 |
Q |
| |
|
|||||||||||| || |||||||| |
|
|
| T |
4652531 |
ggtgaagggtagcctagggtattt |
4652508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 4642998 - 4642690
Alignment:
| Q |
11 |
cagagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcga |
110 |
Q |
| |
|
||||||||||| | ||||| || |||||| | | || |||||| |||| ||||| |||||||| ||||||| || || |||||| | |||| || || |
|
|
| T |
4642998 |
cagagatgattttggtttatgagttcatgcagcacggtactctttgtgagtatctttatggttctaataacgagccactaccttggaggcagaggcttga |
4642899 |
T |
|
| Q |
111 |
gattttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagat |
210 |
Q |
| |
|
||| |||| ||||| |||||||| || ||||||||||||| | | ||||||||| || ||||| ||||| |||||||| |||||||||||||| ||| |
|
|
| T |
4642898 |
aattctattaggtgccgcaagagggctgaattatcttcatgctgaggtgaagcacaaaataatacatcgtgacgtgaagagcaccaacatattgttggat |
4642799 |
T |
|
| Q |
211 |
gataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctcg |
310 |
Q |
| |
|
|| |||||| | ||||||||||| || ||||||||||| || |||||||| ||||| || |||| |||||| ||||||| | |||||| || || || | |
|
|
| T |
4642798 |
gaaaaatggatagctaaggtttccgacttcgggttatccaaggtgggacctacagggatatcgactacccacatcagcacaatggtgaaaggaagccttg |
4642699 |
T |
|
| Q |
311 |
ggtatttag |
319 |
Q |
| |
|
||||||||| |
|
|
| T |
4642698 |
ggtatttag |
4642690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 319
Target Start/End: Complemental strand, 4671884 - 4671626
Alignment:
| Q |
61 |
tatctctatggttcggataacgaacctcttacttggaagaagagactcgagattttattgggtgctgcaagaggcctacattatcttcatgcaggtgcga |
160 |
Q |
| |
|
||||| |||||||| ||||||| || || |||||| | |||| || |||||| ||||||||||||| ||||| ||| ||||||||||||| | | || |
|
|
| T |
4671884 |
tatctttatggttctaataacgagccactaccttggaggcagaggcttgagattctattgggtgctgcgagagggctaaattatcttcatgctgaggtga |
4671785 |
T |
|
| Q |
161 |
agcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagatgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggacc |
260 |
Q |
| |
|
||||||| || ||||| ||||| |||||||| |||||||||||||| ||||| |||||| | ||||||||||| || ||||||||||| || |||||||| |
|
|
| T |
4671784 |
agcacaaaataatacatcgtgacgtgaagagcaccaacatattgttggatgagaaatggatagctaaggtttccgacttcgggttatccaaggtgggacc |
4671685 |
T |
|
| Q |
261 |
aacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctcgggtatttag |
319 |
Q |
| |
|
|| || || | | |||||||||||||| | |||||| || || || |||||||||| |
|
|
| T |
4671684 |
cacggggataacaactacccacgtcagcacaatggtgaaaggaagccttgggtatttag |
4671626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 302
Target Start/End: Complemental strand, 4630120 - 4629912
Alignment:
| Q |
94 |
tggaagaagagactcgagattttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagta |
193 |
Q |
| |
|
|||||| |||| || ||||| |||||||||| || ||||| || ||||||||||| | | | ||||||||| || ||||| ||||| || ||||| | |
|
|
| T |
4630120 |
tggaagcagaggcttgagatcctattgggtgcagcgagagggctgaattatcttcattctgaggtgaagcacaagataatacatcgtgacgtaaagagca |
4630021 |
T |
|
| Q |
194 |
ccaacatattgttagatgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaa |
293 |
Q |
| |
|
|||||||| |||| ||||| |||||||| |||||||||||||||||||||||||| || |||||||| |||||||| ||| ||||| |||||||| | |
|
|
| T |
4630020 |
ccaacatactgttggatgagaaatgggtagctaaggtttctgatttcgggttatccaaggtgggacctacaggaataacgactacccatgtcagcacgat |
4629921 |
T |
|
| Q |
294 |
ggtgaaggg |
302 |
Q |
| |
|
||||||||| |
|
|
| T |
4629920 |
ggtgaaggg |
4629912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 4635990 - 4635872
Alignment:
| Q |
172 |
atacaccgtgatgtgaagagtaccaacatattgttagatgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgt |
271 |
Q |
| |
|
||||| ||||| || ||||| |||||||||||||| ||||| |||||| | ||||||||||||||||| ||||||||||| |||||||| ||||| || | |
|
|
| T |
4635990 |
atacatcgtgacgtaaagagcaccaacatattgttggatgagaaatggatagctaaggtttctgattttgggttatcaaaggtgggaccgacaggtatat |
4635891 |
T |
|
| Q |
272 |
cgatgacccacgtcagcac |
290 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
4635890 |
cgactacccacgtcagcac |
4635872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 317
Target Start/End: Complemental strand, 4666229 - 4665923
Alignment:
| Q |
11 |
cagagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcga |
110 |
Q |
| |
|
||||||||||||| ||||| || |||||| | | || |||||| | || ||||| |||||||| ||||| | || || | |||||| |||| || || |
|
|
| T |
4666229 |
cagagatgattctggtttatgagttcatgcagcacggtactctttgcgagtatctttatggttctaataaccagcccctatcatggaagcagaggcttga |
4666130 |
T |
|
| Q |
111 |
gattttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagat |
210 |
Q |
| |
|
|||| | |||||||| || ||||| || ||||||||||| | | | ||| || || || ||||||||||| |||||||| |||||||||||||| ||| |
|
|
| T |
4666129 |
gattcttttgggtgcagcgagagggctgaattatcttcatactgaggtgaaacagaagataatacaccgtgacgtgaagagcaccaacatattgttggat |
4666030 |
T |
|
| Q |
211 |
gataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctcg |
310 |
Q |
| |
|
|| |||||| |||| |||||||| || || |||||||| || |||||||| ||||| || || | ||||| |||||||| | ||||||||| || |||| |
|
|
| T |
4666029 |
gaaaaatggatggcaaaggtttccgactttgggttatccaaggtgggaccgacagggatatcaactacccatgtcagcacgatggtgaaggggagcctcg |
4665930 |
T |
|
| Q |
311 |
ggtattt |
317 |
Q |
| |
|
| ||||| |
|
|
| T |
4665929 |
gatattt |
4665923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 4660993 - 4660843
Alignment:
| Q |
116 |
tattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagatgataa |
215 |
Q |
| |
|
|||||||| | |||||||| | |||||||||||||| | | ||| ||||| || |||||||| || || ||||| |||||||||||||| ||| | || |
|
|
| T |
4660993 |
tattgggttcagcaagagggttgcattatcttcatgctgaggtgaaacacaaaataatacaccgcgacgtaaagagcaccaacatattgttggatcacaa |
4660894 |
T |
|
| Q |
216 |
atgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacagg |
266 |
Q |
| |
|
|||||| ||||||||||| || ||||||||||| || |||||||| ||||| |
|
|
| T |
4660893 |
atgggtagctaaggtttccgacttcgggttatccaaggtgggaccgacagg |
4660843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 27539502 - 27539572
Alignment:
| Q |
169 |
atcatacaccgtgatgtgaagagtaccaacatattgttagatgataaatgggtggctaaggtttctgattt |
239 |
Q |
| |
|
||||| |||||||||||||||| ||| ||||| || ||||||| || |||||||| |||||||||||||| |
|
|
| T |
27539502 |
atcatccaccgtgatgtgaagactacaaacattttactagatgagaagtgggtggccaaggtttctgattt |
27539572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 319
Target Start/End: Original strand, 18926562 - 18926869
Alignment:
| Q |
12 |
agagatgattctcgtttacgacttcatggaacgtggcactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcgag |
111 |
Q |
| |
|
|||||||||||| |||| || |||||| ||||||| |||||| |||| ||||| |||||||| ||||| |||| || ||||||| | || || ||| |
|
|
| T |
18926562 |
agagatgattctgatttatgagttcatgcaacgtggtactctttgtgagtatctatatggttccaataaccaacccctactttggaagcaaaggcttgag |
18926661 |
T |
|
| Q |
112 |
attttattgggtgctgcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagatg |
211 |
Q |
| |
|
||| |||||||||| |||||||| || ||||||||||||| | | ||| ||||| || ||||| ||||||||||| || ||||||||||| || |||| |
|
|
| T |
18926662 |
attgtattgggtgccgcaagagggctgaattatcttcatgctgaggtgaaacacaagataatacatcgtgatgtgaaaagcaccaacatattattggatg |
18926761 |
T |
|
| Q |
212 |
ataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctcgg |
311 |
Q |
| |
|
| |||||||||||||||||||| || ||||||||||| || ||||||||||| || || || | ||||| |||||||| | ||||||||| ||||| || |
|
|
| T |
18926762 |
agaaatgggtggctaaggtttccgacttcgggttatccaaggtgggaccaacggggatatcaactacccatgtcagcacaatggtgaaggggagtcttgg |
18926861 |
T |
|
| Q |
312 |
gtatttag |
319 |
Q |
| |
|
|||||||| |
|
|
| T |
18926862 |
gtatttag |
18926869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 46271740 - 46271810
Alignment:
| Q |
169 |
atcatacaccgtgatgtgaagagtaccaacatattgttagatgataaatgggtggctaaggtttctgattt |
239 |
Q |
| |
|
||||| |||||||||||||||| ||| ||||| || ||||||| || |||||||| |||||||||||||| |
|
|
| T |
46271740 |
atcatccaccgtgatgtgaagactacaaacattttactagatgagaagtgggtggccaaggtttctgattt |
46271810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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