View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17580_low_9 (Length: 371)

Name: NF17580_low_9
Description: NF17580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17580_low_9
NF17580_low_9
[»] chr2 (24 HSPs)
chr2 (7-205)||(3832003-3832201)
chr2 (234-362)||(3832199-3832327)
chr2 (306-358)||(2265346-2265398)
chr2 (306-362)||(29182167-29182223)
chr2 (306-358)||(45442645-45442697)
chr2 (305-362)||(17912447-17912504)
chr2 (305-358)||(29865460-29865513)
chr2 (305-362)||(38639410-38639467)
chr2 (306-358)||(25954114-25954166)
chr2 (306-358)||(41693673-41693725)
chr2 (306-358)||(43672267-43672319)
chr2 (305-358)||(10671890-10671943)
chr2 (305-358)||(11788365-11788418)
chr2 (305-358)||(23989836-23989889)
chr2 (305-358)||(43592044-43592097)
chr2 (306-358)||(3172481-3172533)
chr2 (306-358)||(19183781-19183833)
chr2 (310-358)||(23990145-23990193)
chr2 (303-363)||(26239104-26239164)
chr2 (306-362)||(31644840-31644896)
chr2 (306-362)||(37228732-37228788)
chr2 (306-358)||(43597448-43597500)
chr2 (306-358)||(43710657-43710709)
chr2 (298-358)||(44985933-44985993)
[»] chr5 (22 HSPs)
chr5 (303-358)||(42207238-42207293)
chr5 (308-362)||(22551264-22551318)
chr5 (305-358)||(10744003-10744056)
chr5 (305-358)||(14318043-14318096)
chr5 (306-358)||(9179592-9179644)
chr5 (305-357)||(23381948-23382000)
chr5 (306-358)||(29693039-29693091)
chr5 (306-358)||(38496731-38496783)
chr5 (296-363)||(19565456-19565523)
chr5 (307-358)||(21050575-21050626)
chr5 (307-362)||(42553642-42553697)
chr5 (300-362)||(31037686-31037748)
chr5 (297-363)||(35876678-35876744)
chr5 (307-357)||(38962806-38962856)
chr5 (309-362)||(16038685-16038738)
chr5 (305-362)||(20690731-20690788)
chr5 (305-358)||(36577720-36577773)
chr5 (305-358)||(39379559-39379612)
chr5 (306-355)||(40029140-40029189)
chr5 (306-358)||(4736491-4736543)
chr5 (306-358)||(26133362-26133414)
chr5 (306-358)||(38786158-38786210)
[»] chr7 (19 HSPs)
chr7 (305-363)||(30709588-30709646)
chr7 (306-358)||(6911081-6911133)
chr7 (307-362)||(21223405-21223460)
chr7 (305-362)||(31310363-31310420)
chr7 (306-358)||(44958455-44958507)
chr7 (307-358)||(1974009-1974060)
chr7 (310-361)||(37952997-37953048)
chr7 (307-358)||(44403198-44403249)
chr7 (305-358)||(18022653-18022706)
chr7 (305-362)||(23816668-23816725)
chr7 (297-362)||(35469870-35469935)
chr7 (305-358)||(39832904-39832957)
chr7 (306-358)||(5234153-5234205)
chr7 (306-358)||(6509419-6509471)
chr7 (310-358)||(30709328-30709376)
chr7 (307-355)||(32189076-32189124)
chr7 (305-357)||(38486476-38486528)
chr7 (306-358)||(44344738-44344790)
chr7 (306-358)||(48854019-48854071)
[»] chr4 (29 HSPs)
chr4 (305-362)||(22584285-22584342)
chr4 (304-361)||(28448831-28448888)
chr4 (306-358)||(13764756-13764808)
chr4 (306-362)||(22099857-22099913)
chr4 (307-363)||(25358484-25358540)
chr4 (306-358)||(52442041-52442093)
chr4 (307-354)||(9446276-9446323)
chr4 (307-358)||(28809011-28809062)
chr4 (299-358)||(35415291-35415350)
chr4 (304-358)||(13479560-13479614)
chr4 (305-358)||(9289264-9289317)
chr4 (309-358)||(18831127-18831176)
chr4 (305-362)||(20291984-20292041)
chr4 (309-358)||(30564835-30564884)
chr4 (309-358)||(43368467-43368516)
chr4 (305-358)||(46088009-46088062)
chr4 (305-362)||(51708691-51708748)
chr4 (305-358)||(53716919-53716972)
chr4 (306-358)||(6827545-6827597)
chr4 (306-358)||(6827823-6827875)
chr4 (306-358)||(8760730-8760782)
chr4 (306-358)||(24474912-24474964)
chr4 (306-358)||(29380859-29380911)
chr4 (306-358)||(34361802-34361854)
chr4 (306-358)||(41620205-41620257)
chr4 (306-358)||(41921033-41921085)
chr4 (305-357)||(42823774-42823826)
chr4 (306-362)||(45474541-45474597)
chr4 (306-358)||(55072388-55072440)
[»] chr8 (21 HSPs)
chr8 (308-358)||(30969399-30969449)
chr8 (305-362)||(18549199-18549256)
chr8 (306-363)||(24187841-24187898)
chr8 (305-358)||(28398984-28399037)
chr8 (305-358)||(32040073-32040126)
chr8 (306-362)||(7272419-7272475)
chr8 (306-358)||(9175011-9175063)
chr8 (303-358)||(8094790-8094845)
chr8 (307-358)||(29487750-29487801)
chr8 (306-357)||(38930301-38930352)
chr8 (297-363)||(3512210-3512276)
chr8 (306-363)||(2728231-2728288)
chr8 (306-363)||(4017244-4017301)
chr8 (305-358)||(29158352-29158405)
chr8 (305-358)||(33526361-33526414)
chr8 (305-358)||(33636320-33636373)
chr8 (306-362)||(1525808-1525864)
chr8 (306-358)||(14238750-14238802)
chr8 (305-357)||(19494117-19494169)
chr8 (306-358)||(20984459-20984511)
chr8 (306-358)||(28324130-28324182)
[»] chr3 (28 HSPs)
chr3 (307-357)||(275783-275833)
chr3 (305-362)||(20757720-20757777)
chr3 (305-362)||(45313498-45313555)
chr3 (305-358)||(46622078-46622131)
chr3 (306-362)||(20611019-20611075)
chr3 (306-362)||(39288572-39288628)
chr3 (306-362)||(46186716-46186772)
chr3 (309-359)||(16679678-16679728)
chr3 (305-363)||(28452320-28452378)
chr3 (304-362)||(29490688-29490746)
chr3 (296-358)||(45320928-45320990)
chr3 (305-362)||(863279-863336)
chr3 (297-358)||(3152060-3152121)
chr3 (305-358)||(15979650-15979703)
chr3 (305-358)||(28452145-28452198)
chr3 (305-358)||(29446155-29446208)
chr3 (305-358)||(34238596-34238649)
chr3 (305-358)||(51834891-51834944)
chr3 (306-358)||(5345638-5345690)
chr3 (306-358)||(22008525-22008577)
chr3 (306-358)||(22016043-22016095)
chr3 (306-358)||(26799887-26799939)
chr3 (305-357)||(30130156-30130208)
chr3 (306-358)||(30268504-30268556)
chr3 (306-362)||(35177254-35177310)
chr3 (306-358)||(39436717-39436769)
chr3 (306-358)||(43440494-43440546)
chr3 (306-358)||(47114486-47114538)
[»] chr1 (29 HSPs)
chr1 (305-362)||(4617340-4617397)
chr1 (305-362)||(26324892-26324949)
chr1 (306-362)||(15211510-15211566)
chr1 (310-358)||(20756022-20756070)
chr1 (307-358)||(34383193-34383244)
chr1 (305-363)||(10887231-10887289)
chr1 (305-363)||(13260265-13260323)
chr1 (308-362)||(37624972-37625026)
chr1 (305-359)||(48955712-48955766)
chr1 (305-358)||(7867127-7867180)
chr1 (298-363)||(15526306-15526371)
chr1 (305-358)||(19622653-19622706)
chr1 (305-358)||(21383102-21383155)
chr1 (305-358)||(21391094-21391147)
chr1 (305-354)||(33067346-33067395)
chr1 (305-358)||(48609543-48609596)
chr1 (305-358)||(50429158-50429211)
chr1 (306-358)||(990087-990139)
chr1 (306-358)||(3679625-3679677)
chr1 (306-358)||(3753521-3753573)
chr1 (306-358)||(6567445-6567497)
chr1 (306-358)||(14007488-14007540)
chr1 (307-359)||(17984649-17984701)
chr1 (306-358)||(31258338-31258390)
chr1 (306-358)||(34002889-34002941)
chr1 (305-357)||(41358613-41358665)
chr1 (306-358)||(41881092-41881144)
chr1 (306-358)||(45290456-45290508)
chr1 (306-362)||(46868225-46868281)
[»] scaffold0016 (1 HSPs)
scaffold0016 (305-357)||(10465-10517)
[»] chr6 (15 HSPs)
chr6 (306-358)||(11448536-11448588)
chr6 (306-357)||(25431575-25431626)
chr6 (305-355)||(543676-543726)
chr6 (305-363)||(15962025-15962083)
chr6 (305-358)||(318046-318099)
chr6 (306-363)||(3414696-3414753)
chr6 (309-358)||(14428899-14428948)
chr6 (305-358)||(14655377-14655430)
chr6 (305-358)||(25431803-25431856)
chr6 (306-358)||(6468309-6468361)
chr6 (306-358)||(9896586-9896638)
chr6 (310-358)||(10091039-10091087)
chr6 (306-358)||(14656209-14656261)
chr6 (306-358)||(30928680-30928732)
chr6 (306-358)||(31398490-31398542)
[»] scaffold0326 (2 HSPs)
scaffold0326 (305-358)||(4039-4092)
scaffold0326 (305-358)||(19221-19274)
[»] scaffold0160 (1 HSPs)
scaffold0160 (297-358)||(27313-27374)
[»] scaffold0811 (1 HSPs)
scaffold0811 (306-358)||(1310-1362)
[»] scaffold0373 (1 HSPs)
scaffold0373 (306-358)||(8546-8598)
[»] scaffold0370 (1 HSPs)
scaffold0370 (306-358)||(238-290)
[»] scaffold0204 (1 HSPs)
scaffold0204 (309-357)||(17126-17174)
[»] scaffold0056 (1 HSPs)
scaffold0056 (306-358)||(54814-54866)
[»] scaffold0051 (2 HSPs)
scaffold0051 (306-362)||(5398-5454)
scaffold0051 (306-358)||(5657-5709)


Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 3832003 - 3832201
Alignment:
Q  7 taaattaacatagcataatttacccttttcaaaagaaatatacaaaactgaaatatttagtgagactaactctaacaatctattattggcattttcctaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3832003 taaattaacatagcataatttacccttttcaaaagaaatatacaaaactgaaatatttagtgagactaactctaacaatctattattggcattttcctaa 3832102  T
Q  107 taaaattatagaagactacaatgcctgcccgtatatatcatgatgatattatttcagtactagttgtgacttgtcaggtgcaaaacgttgaaatactat 205  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3832103 taaaattatacaagactacaatgcctgcccgtatatatcatgatgatattatttcagtactagttgtgacttgtcaggtgcaaaacgttgaaatactat 3832201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 234 - 362
Target Start/End: Original strand, 3832199 - 3832327
Alignment:
Q  234 tattatgtttattataagaacgagaatggattagacgaggtttcaaattacggaacaggatgcttaaaatctaggctaaaatatgattttagtccttata 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| ||    
T  3832199 tattatgtttattataagaacgagaatggattagacgaggtttcaaattacgaaacaggatgcataaaatctaggctaaaatatgattttagttcttgta 3832298  T
Q  334 aatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||||||||||||| |||||    
T  3832299 aatatgtttggttttggttttagcctctg 3832327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 2265398 - 2265346
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||||||  |||||||| | |||||||||||||||    
T  2265398 aggctaaaatatgattttagtccttgcaaatatgtctcgttttggttttagtc 2265346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 29182167 - 29182223
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||||||| ||||||  ||||||||||  ||||||||||||||||||    
T  29182167 aggctaaaatatgattttggtccttgcaaatatgtttcattttggttttagtctctg 29182223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 45442697 - 45442645
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||||||  |||||||| | |||||||||||||||    
T  45442697 aggctaaaatatgattttagtccttgcaaatatgtctcgttttggttttagtc 45442645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 17912447 - 17912504
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||| ||||||||||||||||||| |  |||||||| | |||||||||||||||||||    
T  17912447 taggttaaaatatgattttagtccctgcaaatatgtctcgttttggttttagtctctg 17912504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 29865513 - 29865460
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| |||||||||||  ||||||| || |||||||||||||||    
T  29865513 taggctaaaatatggttttagtccttgcaaatatgcttcgttttggttttagtc 29865460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 38639410 - 38639467
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||||||    
T  38639410 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtctctg 38639467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 25954114 - 25954166
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||||| |||||||||||||||    
T  25954114 aggctaaaatatgtttttagtccctgcaaatatgtttcgttttggttttagtc 25954166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 41693673 - 41693725
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||||| |||||||||||||||    
T  41693673 aggctaaaatatggttttagtccctgcaaatatgtttcgttttggttttagtc 41693725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 43672319 - 43672267
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||| |||| |  |||||||||| |||||||||||||||    
T  43672319 aggctaaaatatgattttggtccctgcaaatatgttttgttttggttttagtc 43672267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 10671943 - 10671890
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  10671943 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 10671890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 11788418 - 11788365
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  11788418 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 11788365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 23989836 - 23989889
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||||| |  |||||||  | |||||||||||||||    
T  23989836 taggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtc 23989889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 43592044 - 43592097
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| |||||||||||  |||||||  | |||||||||||||||    
T  43592044 taggctaaaatatggttttagtccttgcaaatatgcctcgttttggttttagtc 43592097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 3172533 - 3172481
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||| ||||||  |||||||  | |||||||||||||||    
T  3172533 aggctaaaatatgattttggtccttgcaaatatgcctcgttttggttttagtc 3172481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 19183781 - 19183833
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  19183781 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 19183833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 23990193 - 23990145
Alignment:
Q  310 taaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||| |||||||||||  |||||||| | |||||||||||||||    
T  23990193 taaaatatggttttagtccttgcaaatatgtctcgttttggttttagtc 23990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 26239164 - 26239104
Alignment:
Q  303 tctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    |||||||||||||||| ||||||||| |  |||||||| | |||||| |||||||| ||||    
T  26239164 tctaggctaaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgc 26239104  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 31644840 - 31644896
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| |||| |||| |  |||||||| | |||||||||||||||||||    
T  31644840 aggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtctctg 31644896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 37228732 - 37228788
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| |||| |||| |  |||||||| | |||||||||||||||||||    
T  37228732 aggctaaaatatggttttggtccctgcaaatatgtatcgttttggttttagtctctg 37228788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 43597500 - 43597448
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||||||| |   ||||||| | |||||||||||||||    
T  43597500 aggctaaaatatgattttagtccctgctaatatgtctcgttttggttttagtc 43597448  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 43710709 - 43710657
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||| ||||  |||||||  | |||||||||||||||    
T  43710709 aggctaaaatatgattttagcccttgcaaatatgcctcgttttggttttagtc 43710657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 44985993 - 44985933
Alignment:
Q  298 taaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||| |||||||||||||| ||||| ||| |  |||||||| | |||||||||||||||    
T  44985993 taaaatttaggctaaaatatggttttaatccctgcaaatatgtctcgttttggttttagtc 44985933  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 42207238 - 42207293
Alignment:
Q  303 tctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||| ||||||||||| ||||||||| | |||||||||||||||    
T  42207238 tctaggctaaaatatggttttagtccttgtaaatatgtctcgttttggttttagtc 42207293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 22551318 - 22551264
Alignment:
Q  308 gctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||| ||||||||  | ||||||||||| |||||||||||||||||||    
T  22551318 gctaaaatatggttttagtctctgtaaatatgttttgttttggttttagtctctg 22551264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 10744056 - 10744003
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| |||||||||||  |||||||| | |||||||||||||||    
T  10744056 taggctaaaatatggttttagtccttgcaaatatgtctcgttttggttttagtc 10744003  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 14318043 - 14318096
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| |||||||||||  |||||||| | |||||||||||||||    
T  14318043 taggctaaaatatggttttagtccttgcaaatatgtctcgttttggttttagtc 14318096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 9179592 - 9179644
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||||||||||  ||||||| || |||||||||||||||    
T  9179592 aggctaaaatatggttttagtccttgcaaatatgattcgttttggttttagtc 9179644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 23381948 - 23382000
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    |||||||||||||| ||||||||| |  |||||||| ||||||||||||||||    
T  23381948 taggctaaaatatggttttagtccctgcaaatatgtctggttttggttttagt 23382000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 29693091 - 29693039
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||||||| |  ||||||| || |||||||||||||||    
T  29693091 aggctaaaatatgattttagtccctgcaaatatgcttcgttttggttttagtc 29693039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 38496783 - 38496731
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||||| |||||||||||||||    
T  38496783 aggctaaaatatggttttagtccctgcaaatatgtttcgttttggttttagtc 38496731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 19565456 - 19565523
Alignment:
Q  296 cttaaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    ||||||||| ||||||||||||| |||| |||| |  |||||||| | ||||||||||||||| ||||    
T  19565456 cttaaaatcaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgc 19565523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 21050575 - 21050626
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||| || ||||||| || |||||| ||||||||    
T  21050575 ggctaaaatatgattttagtccctacaaatatgcttcgttttgattttagtc 21050626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 42553642 - 42553697
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||||||| |||| |  |||||||| | |||||||||||||||||||    
T  42553642 ggctaaaatatgattttggtccctgcaaatatgtctcgttttggttttagtctctg 42553697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 31037748 - 31037686
Alignment:
Q  300 aaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||| |||||||||||||| ||||||||| |  |||||||| | |||||||||||| ||||||    
T  31037748 aaatttaggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttattctctg 31037686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 363
Target Start/End: Original strand, 35876678 - 35876744
Alignment:
Q  297 ttaaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    |||||||| ||||||||||||| |||| |||| |  ||||||| || ||||||||||||||| ||||    
T  35876678 ttaaaatcaaggctaaaatatggttttggtccctgcaaatatgcttcgttttggttttagtccctgc 35876744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 38962806 - 38962856
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    |||||||||||| ||||||||| | ||||||||| | ||||||||||||||    
T  38962806 ggctaaaatatggttttagtccctgtaaatatgtctcgttttggttttagt 38962856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 16038738 - 16038685
Alignment:
Q  309 ctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||||||||| |  |||||||  | |||||||||||||||||||    
T  16038738 ctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtctctg 16038685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 20690731 - 20690788
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||| |||| |||| |  |||||||| | |||||||||||||||||||    
T  20690731 taggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtctctg 20690788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 36577720 - 36577773
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  36577720 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 36577773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 39379612 - 39379559
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  ||||||| || |||||||||||||||    
T  39379612 taggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtc 39379559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 40029140 - 40029189
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggtttta 355  Q
    ||||||||||||| ||||||||| | ||||||||| | ||||||||||||    
T  40029140 aggctaaaatatggttttagtccctgtaaatatgtctcgttttggtttta 40029189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 4736543 - 4736491
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||| |||| |  |||||||||| |||||||||||||||    
T  4736543 aggctaaaatatggttttggtccctgcaaatatgtttcgttttggttttagtc 4736491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 26133414 - 26133362
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  26133414 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 26133362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 38786158 - 38786210
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  ||||||| || |||||||||||||||    
T  38786158 aggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtc 38786210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 30709646 - 30709588
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    |||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||    
T  30709646 taggctaaaatatgattttagtccctgcaaatatgtctcgttttggttttagtctctgc 30709588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 6911081 - 6911133
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||| |||||||||||||||| | |||||| ||||||||    
T  6911081 aggctaaaatatgattttggtccttataaatatgtctcgttttgattttagtc 6911133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 21223405 - 21223460
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||||||||||| |  ||||||| || |||||||||||||||||||    
T  21223405 ggctaaaatatgattttagtccctgcaaatatgcttcgttttggttttagtctctg 21223460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 31310363 - 31310420
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||||||||||||| |  |||||| | | |||||||||||||||||||    
T  31310363 taggctaaaatatgattttagtccctgcaaatatttctcgttttggttttagtctctg 31310420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 44958507 - 44958455
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||| |||| || |||||||| | |||||||||||||||    
T  44958507 aggctaaaatatgattttggtccctacaaatatgtctcgttttggttttagtc 44958455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 1974009 - 1974060
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||| ||||||||| |  |||||||||| |||||||||||||||    
T  1974009 ggctaaaatatggttttagtccctgcaaatatgtttcgttttggttttagtc 1974060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 37953048 - 37952997
Alignment:
Q  310 taaaatatgattttagtccttataaatatgtttggttttggttttagtctct 361  Q
    ||||||||| ||||||||| | ||||||||| | ||||||||||||||||||    
T  37953048 taaaatatggttttagtccctgtaaatatgtcttgttttggttttagtctct 37952997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 44403249 - 44403198
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||| |||||||||||  |||||||| | |||||||||||||||    
T  44403249 ggctaaaatatggttttagtccttgcaaatatgtctcgttttggttttagtc 44403198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 18022706 - 18022653
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||||| |  |||||||  | |||||||||||||||    
T  18022706 taggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtc 18022653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 23816668 - 23816725
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||| ||||||||| |  |||||||  | |||||||||||||||||||    
T  23816668 taggctaaaatatggttttagtccctgcaaatatggctcgttttggttttagtctctg 23816725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 35469870 - 35469935
Alignment:
Q  297 ttaaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||  |||||||||||| ||||  ||| |  |||||||||| |||||||||||||||||||    
T  35469870 ttaaaatcatggctaaaatatggttttgatccctgcaaatatgtttcgttttggttttagtctctg 35469935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 39832904 - 39832957
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  39832904 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 39832957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 5234205 - 5234153
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||| |||| || |||||||| | |||||||||||||||    
T  5234205 aggctaaaatatggttttggtccctacaaatatgtctcgttttggttttagtc 5234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 6509471 - 6509419
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| || |||||||  | |||||||||||||||    
T  6509471 aggctaaaatatggttttagtccctacaaatatgcctcgttttggttttagtc 6509419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 30709328 - 30709376
Alignment:
Q  310 taaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||| || |||||||  | |||||||||||||||    
T  30709328 taaaatatgattttagtccctacaaatatgcctcgttttggttttagtc 30709376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 355
Target Start/End: Original strand, 32189076 - 32189124
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggtttta 355  Q
    |||||||||||||||||||||| |  ||||||| || ||||||||||||    
T  32189076 ggctaaaatatgattttagtccctgcaaatatgcttcgttttggtttta 32189124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 38486476 - 38486528
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    ||||||||||||||||||| |||| | ||||||||| | ||||| ||||||||    
T  38486476 taggctaaaatatgattttggtccctgtaaatatgtctcgttttagttttagt 38486528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 44344790 - 44344738
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  44344790 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 44344738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 48854071 - 48854019
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||  ||| |  |||||||||| |||||||||||||||    
T  48854071 aggctaaaatatgattttgatccctgcaaatatgtttcgttttggttttagtc 48854019  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 22584285 - 22584342
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||| |||||||||||  |||||||| | |||||||||||||||||||    
T  22584285 taggctaaaatatggttttagtccttgcaaatatgtctcgttttggttttagtctctg 22584342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 28448831 - 28448888
Alignment:
Q  304 ctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctct 361  Q
    ||||||||||||||| |||||||||||| |||||||  | ||||||||||||||||||    
T  28448831 ctaggctaaaatatggttttagtccttacaaatatgcctcgttttggttttagtctct 28448888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 13764808 - 13764756
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||| |||| | ||||||||||| |||||||||||||||    
T  13764808 aggctaaaatatggttttggtccctgtaaatatgtttcgttttggttttagtc 13764756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 22099913 - 22099857
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||||||    
T  22099913 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtctctg 22099857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 25358540 - 25358484
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    ||||||||||||||||| |||| | ||||||||| | ||||||||||||||| ||||    
T  25358540 ggctaaaatatgattttggtccctgtaaatatgtctcgttttggttttagtccctgc 25358484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 52442093 - 52442041
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||||||||||  |||||||| | |||||||||||||||    
T  52442093 aggctaaaatatggttttagtccttgcaaatatgtctcgttttggttttagtc 52442041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 9446323 - 9446276
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggtttt 354  Q
    |||||||||||||||||||||| | ||||||||| | |||||||||||    
T  9446323 ggctaaaatatgattttagtccctgtaaatatgtctcgttttggtttt 9446276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 28809011 - 28809062
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||| |||||||||||  |||||||| | |||||||||||||||    
T  28809011 ggctaaaatatggttttagtccttgcaaatatgtatcgttttggttttagtc 28809062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 35415291 - 35415350
Alignment:
Q  299 aaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||| |||||||||||||| ||||||||| | ||||||||  | |||||||||||||||    
T  35415291 aaaatataggctaaaatatggttttagtccctgtaaatatgcatcgttttggttttagtc 35415350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 13479614 - 13479560
Alignment:
Q  304 ctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  13479614 ctaggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 13479560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 9289264 - 9289317
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  9289264 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 9289317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 18831176 - 18831127
Alignment:
Q  309 ctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||| ||||||||| | ||||||||| | |||||||||||||||    
T  18831176 ctaaaatatggttttagtccctgtaaatatgtcttgttttggttttagtc 18831127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 20291984 - 20292041
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||||||||| |||| |  |||||||  | |||||||||||||||||||    
T  20291984 taggctaaaatatgattttggtccctgcaaatatgcctcgttttggttttagtctctg 20292041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 30564835 - 30564884
Alignment:
Q  309 ctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||| ||||||||| |  |||||||||| |||||||||||||||    
T  30564835 ctaaaatatggttttagtccctgcaaatatgttttgttttggttttagtc 30564884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 43368467 - 43368516
Alignment:
Q  309 ctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||| ||||||||| |  |||||||||| |||||||||||||||    
T  43368467 ctaaaatatggttttagtccctgcaaatatgtttcgttttggttttagtc 43368516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 46088062 - 46088009
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  46088062 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 46088009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 51708691 - 51708748
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||| ||||||||| |  |||||||  | |||||||||||||||||||    
T  51708691 taggctaaaatatggttttagtccctgcaaatatggctcgttttggttttagtctctg 51708748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 53716919 - 53716972
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  53716919 taggctaaaatatggttttagtccctgcaaatatgtcttgttttggttttagtc 53716972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 6827545 - 6827597
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||||||||||  |||||||  | |||||||||||||||    
T  6827545 aggctaaaatatggttttagtccttgcaaatatgcctcgttttggttttagtc 6827597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 6827875 - 6827823
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||||||| |  |||||||  | |||||||||||||||    
T  6827875 aggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtc 6827823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 8760782 - 8760730
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||||||||||  |||||||  | |||||||||||||||    
T  8760782 aggctaaaatatggttttagtccttgcaaatatggctcgttttggttttagtc 8760730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 24474964 - 24474912
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  24474964 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 24474912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 29380911 - 29380859
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  29380911 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 29380859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 34361802 - 34361854
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  34361802 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 34361854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 41620257 - 41620205
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| | ||||||||  | |||||||||||||||    
T  41620257 aggctaaaatatggttttagtccctgtaaatatgcatcgttttggttttagtc 41620205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 41921085 - 41921033
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||||| || |  |||||||||| |||||||||||||||    
T  41921085 aggctaaaatatggttttagcccctgcaaatatgtttcgttttggttttagtc 41921033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 42823774 - 42823826
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    ||||||||||||||||||| |||| |  |||||||| | ||||||||||||||    
T  42823774 taggctaaaatatgattttggtccctgcaaatatgtctcgttttggttttagt 42823826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 45474597 - 45474541
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| ||||||||| |  ||||||| || | |||||||||||||||||    
T  45474597 aggctaaaatatggttttagtccctgcaaatatgcttcgctttggttttagtctctg 45474541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 55072388 - 55072440
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  ||||||| || |||||||||||||||    
T  55072388 aggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtc 55072440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 30969399 - 30969449
Alignment:
Q  308 gctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||| |||| ||||||| |||||||||| |||||||||||||||    
T  30969399 gctaaaatatggttttggtccttacaaatatgtttcgttttggttttagtc 30969449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 18549199 - 18549256
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||| ||||||||| |  ||||||| || |||||||||||||||||||    
T  18549199 taggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtctctg 18549256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 24187898 - 24187841
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||| ||||    
T  24187898 aggctaaaatatgattttagtccctgcaaatatgtctcgttttggttttagtccctgc 24187841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 28399037 - 28398984
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||||| |  ||||||| || |||||||||||||||    
T  28399037 taggctaaaatatgattttagtccctgcaaatatggttcgttttggttttagtc 28398984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 32040073 - 32040126
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||| ||||||| |  |||||||||| |||||||||||||||    
T  32040073 taggctaaaatatgatcttagtccctgcaaatatgtttcgttttggttttagtc 32040126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 7272419 - 7272475
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||||||    
T  7272419 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtctctg 7272475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 9175011 - 9175063
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||| ||||||  |||||||| | |||||||||||||||    
T  9175011 aggctaaaatatgattttggtccttgcaaatatgtctcgttttggttttagtc 9175063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 8094845 - 8094790
Alignment:
Q  303 tctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||| |||||||||||  |||||||  | |||||||||||||||    
T  8094845 tctaggctaaaatatggttttagtccttgcaaatatgcctcgttttggttttagtc 8094790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 29487750 - 29487801
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||| |||| |  |||||||||| |||||||||||||||    
T  29487750 ggctaaaatatgattttcgtccctgcaaatatgtttcgttttggttttagtc 29487801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 38930301 - 38930352
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    ||||||||||||| ||||||||| | ||||||||| | ||||||||||||||    
T  38930301 aggctaaaatatggttttagtccctgtaaatatgtctcgttttggttttagt 38930352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 363
Target Start/End: Complemental strand, 3512276 - 3512210
Alignment:
Q  297 ttaaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    ||||||| |||||||||||||| |||| |||| |  |||||||| | ||||||||||||||| ||||    
T  3512276 ttaaaatttaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgc 3512210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 2728231 - 2728288
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    |||||||||||||||||| |||| |  |||||||| | ||||||||||||||| ||||    
T  2728231 aggctaaaatatgattttggtccctgcaaatatgtctcgttttggttttagtccctgc 2728288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 4017301 - 4017244
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    ||||||||||||| |||||||||||  |||||||  | ||||||||||||||| ||||    
T  4017301 aggctaaaatatggttttagtccttgcaaatatgcctcgttttggttttagtccctgc 4017244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 29158352 - 29158405
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  29158352 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 29158405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 33526414 - 33526361
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||||| |  |||||||  | |||||||||||||||    
T  33526414 taggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtc 33526361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 33636320 - 33636373
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  ||||||| || |||||||||||||||    
T  33636320 taggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtc 33636373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 1525808 - 1525864
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| ||||||||| |  |||||||  | |||||||||||||||||||    
T  1525808 aggctaaaatatggttttagtccctgcaaatatgcctcgttttggttttagtctctg 1525864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 14238750 - 14238802
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  14238750 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 14238802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 19494117 - 19494169
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    |||||||||||||| ||||||||| |  |||||||| | ||||||||||||||    
T  19494117 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagt 19494169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 20984511 - 20984459
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||| |||| || |||||||| | |||||||||||||||    
T  20984511 aggctaaaatatggttttggtccctacaaatatgtctcgttttggttttagtc 20984459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 28324182 - 28324130
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||| |||| || |||||||| | |||||||||||||||    
T  28324182 aggctaaaatatggttttggtccctacaaatatgtcttgttttggttttagtc 28324130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 275833 - 275783
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    |||||||||||||||||||||| | |||||||| || ||||||||||||||    
T  275833 ggctaaaatatgattttagtccctgtaaatatgcttcgttttggttttagt 275783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 20757777 - 20757720
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||||||||| ||| | ||||||||  | |||||||||||||||||||    
T  20757777 taggctaaaatatgattttaatccctgtaaatatgcatcgttttggttttagtctctg 20757720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 45313498 - 45313555
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||||||||| |||||| |||||||| || |||||| ||||||| ||||    
T  45313498 taggctaaaatatgattttggtccttgtaaatatgattcgttttgattttagtatctg 45313555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 46622131 - 46622078
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| |||| ||||||  |||||||||| |||||||||||||||    
T  46622131 taggctaaaatatggttttggtccttgcaaatatgtttcgttttggttttagtc 46622078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 20611019 - 20611075
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| ||||||||| |  ||||||| || |||||||||||||||||||    
T  20611019 aggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtctctg 20611075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 39288572 - 39288628
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||||||    
T  39288572 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtctctg 39288628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 46186772 - 46186716
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| |||||||||||  |||||||  | |||||||||||||||||||    
T  46186772 aggctaaaatatggttttagtccttgcaaatatgcctcgttttggttttagtctctg 46186716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 16679678 - 16679728
Alignment:
Q  309 ctaaaatatgattttagtccttataaatatgtttggttttggttttagtct 359  Q
    |||||||||| |||||||||||  ||||||| || ||||||||||||||||    
T  16679678 ctaaaatatggttttagtccttgaaaatatgcttcgttttggttttagtct 16679728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 28452378 - 28452320
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    |||||||||||||| |||| |||| || ||||||| || ||||||||||||||| ||||    
T  28452378 taggctaaaatatggttttggtccctacaaatatgcttcgttttggttttagtccctgc 28452320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 29490746 - 29490688
Alignment:
Q  304 ctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||||| |||| |||| |  |||||||| | |||||||||||||||||||    
T  29490746 ctaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtctctg 29490688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 45320990 - 45320928
Alignment:
Q  296 cttaaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||  ||||||||||||||||||||||| |  |||||||  | |||||||||||||||    
T  45320990 cttaaaattaaggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtc 45320928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 863279 - 863336
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||||||||| |||| |  |||||||| | ||||| |||||||||||||    
T  863279 taggctaaaatatgattttggtccatgcaaatatgtctcgttttagttttagtctctg 863336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 358
Target Start/End: Complemental strand, 3152121 - 3152060
Alignment:
Q  297 ttaaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||| |||||||||||||| ||||||||| |  |||||||  | |||||||||||||||    
T  3152121 ttaaaatttaggctaaaatatggttttagtccctgcaaatatgcctcgttttggttttagtc 3152060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 15979703 - 15979650
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| |||| |||| || |||||||| | |||||||||||||||    
T  15979703 taggctaaaatatggttttggtccctacaaatatgtctcgttttggttttagtc 15979650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 28452145 - 28452198
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| |||| ||||||  |||||||| | |||||||||||||||    
T  28452145 taggctaaaatatggttttggtccttgcaaatatgtcttgttttggttttagtc 28452198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 29446208 - 29446155
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  29446208 taggctaaaatatggttttagtccctgcaaatatgtcttgttttggttttagtc 29446155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 34238596 - 34238649
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  34238596 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 34238649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 51834944 - 51834891
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  ||||||| || |||||||||||||||    
T  51834944 taggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtc 51834891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 5345690 - 5345638
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  ||||||| || |||||||||||||||    
T  5345690 aggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtc 5345638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 22008525 - 22008577
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  22008525 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 22008577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 22016043 - 22016095
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  22016043 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 22016095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 26799887 - 26799939
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| | ||||||||  | |||||||||||||||    
T  26799887 aggctaaaatatggttttagtccctgtaaatatgcctcgttttggttttagtc 26799939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 30130156 - 30130208
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    |||||||||||||| ||||||||| |  |||||||| | ||||||||||||||    
T  30130156 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagt 30130208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 30268504 - 30268556
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||||||| |  |||||||  | |||||||||||||||    
T  30268504 aggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtc 30268556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 35177254 - 35177310
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||||||| |||| |  |||||||| | |||||||||||||| ||||    
T  35177254 aggctaaaatatgattttggtccctgcaaatatgtctcgttttggttttagtttctg 35177310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 39436717 - 39436769
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  39436717 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 39436769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 43440494 - 43440546
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||||||||||  |||||||| | ||||| |||||||||    
T  43440494 aggctaaaatatggttttagtccttgcaaatatgtctcgttttagttttagtc 43440546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 47114486 - 47114538
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||| |||| |  |||||||| | |||||||||||||||    
T  47114486 aggctaaaatatgattttggtccctgcaaatatgtctcgttttggttttagtc 47114538  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 4617397 - 4617340
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||||||||| || |  | |||||||||| |||||||||||||||||||    
T  4617397 taggctaaaatatgattttggttccaacaaatatgtttcgttttggttttagtctctg 4617340  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 26324949 - 26324892
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||||||||||||||||||| |  |||||||  | |||||||||||||||||||    
T  26324949 taggctaaaatatgattttagtccatgcaaatatgcctcgttttggttttagtctctg 26324892  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 15211510 - 15211566
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| |||| |||| | ||||||||| | |||||||||||||||||||    
T  15211510 aggctaaaatatggttttggtccctgtaaatatgtctcgttttggttttagtctctg 15211566  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 20756022 - 20756070
Alignment:
Q  310 taaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  20756022 taaaatatgattttaatccttgtaaatatgtctcgttttggttttagtc 20756070  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 34383244 - 34383193
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||| | | ||||||||| | |||||||||||||||    
T  34383244 ggctaaaatatgattttagttcctgtaaatatgtattgttttggttttagtc 34383193  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 10887231 - 10887289
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    |||||||||||||| |||| |||| |  |||||||||| ||||||||||||||| ||||    
T  10887231 taggctaaaatatggttttggtccctgcaaatatgtttcgttttggttttagtccctgc 10887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 13260323 - 13260265
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    |||||||||||||| ||||||||| |  |||||||| | ||||||||||||||| ||||    
T  13260323 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgc 13260265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 37625026 - 37624972
Alignment:
Q  308 gctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||| ||||||||| | ||||||||| | ||||||||| |||||||||    
T  37625026 gctaaaatatggttttagtccctgtaaatatgtatcgttttggttgtagtctctg 37624972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 48955712 - 48955766
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtct 359  Q
    |||||||||||||||||||||||| |  |||||||  | ||||||||||||||||    
T  48955712 taggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtct 48955766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 7867127 - 7867180
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| |||||||||||  |||||||| | ||||| |||||||||    
T  7867127 taggctaaaatatggttttagtccttgcaaatatgtctcgttttagttttagtc 7867180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 363
Target Start/End: Complemental strand, 15526371 - 15526306
Alignment:
Q  298 taaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    ||||||| ||||||||||||| |||| |||| |  |||||||| | ||||||||||||||| ||||    
T  15526371 taaaatcaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgc 15526306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 19622653 - 19622706
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  19622653 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 19622706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 21383102 - 21383155
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||||| |   ||||||| | |||||||||||||||    
T  21383102 taggctaaaatatgattttagtccctgctaatatgtctcgttttggttttagtc 21383155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 21391094 - 21391147
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  21391094 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 21391147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 33067346 - 33067395
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggtttt 354  Q
    |||||||||||||| |||||||||||  |||||||| | |||||||||||    
T  33067346 taggctaaaatatggttttagtccttgcaaatatgtctcgttttggtttt 33067395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 48609596 - 48609543
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  48609596 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 48609543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 50429211 - 50429158
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||||||||||||| |  |||||||  | |||||||||||||||    
T  50429211 taggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtc 50429158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 990087 - 990139
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| || |||||||  | |||||||||||||||    
T  990087 aggctaaaatatggttttagtccctacaaatatgcctcgttttggttttagtc 990139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 3679625 - 3679677
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| || |||||||  | |||||||||||||||    
T  3679625 aggctaaaatatggttttagtccctacaaatatgcctcgttttggttttagtc 3679677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 3753573 - 3753521
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| | ||||||||  | |||||||||||||||    
T  3753573 aggctaaaatatggttttagtccctgtaaatatgcctcgttttggttttagtc 3753521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 6567497 - 6567445
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  6567497 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 6567445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 14007488 - 14007540
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  14007488 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 14007540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 17984701 - 17984649
Alignment:
Q  307 ggctaaaatatgattttagtccttataaatatgtttggttttggttttagtct 359  Q
    |||||||||||||||||||||| |  |||||||  | ||||||||||||||||    
T  17984701 ggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtct 17984649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 31258338 - 31258390
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| | ||||||||  | |||||||||||||||    
T  31258338 aggctaaaatatggttttagtccctgtaaatatgcctcgttttggttttagtc 31258390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 34002941 - 34002889
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  34002941 aggctaaaatatggttttagtccctgcaaatatgtcttgttttggttttagtc 34002889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 41358665 - 41358613
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    |||||||||||||| ||||||||| |  |||||||| | ||||||||||||||    
T  41358665 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagt 41358613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 41881092 - 41881144
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  41881092 aggctaaaatatggttttagtccctccaaatatgtctcgttttggttttagtc 41881144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 45290456 - 45290508
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  45290456 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 45290508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 46868225 - 46868281
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    |||||||| |||||||||||||| |  ||||||| ||  ||||||||||||||||||    
T  46868225 aggctaaattatgattttagtccctgcaaatatgcttcattttggttttagtctctg 46868281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 10517 - 10465
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    |||||||||||||| ||||||||| |  |||||||| ||||||||||||||||    
T  10517 taggctaaaatatggttttagtccctgcaaatatgtctggttttggttttagt 10465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 11448536 - 11448588
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||||||| |  |||||||| | |||||||||||||||    
T  11448536 aggctaaaatatgattttagtccctgcaaatatgtctcgttttggttttagtc 11448588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 25431575 - 25431626
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    ||||||||||||||||||| ||| | ||||||||||| |||||| |||||||    
T  25431575 aggctaaaatatgattttaatccctgtaaatatgtttcgttttgattttagt 25431626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 355
Target Start/End: Complemental strand, 543726 - 543676
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggtttta 355  Q
    |||||||||||||||||||||||| |  ||||||| || ||||||||||||    
T  543726 taggctaaaatatgattttagtccctgcaaatatgctttgttttggtttta 543676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 15962025 - 15962083
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    |||||||||||||| |||||||||||  |||||||  | ||||||||||||||| ||||    
T  15962025 taggctaaaatatggttttagtccttgcaaatatgcctcgttttggttttagtccctgc 15962083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 318099 - 318046
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||| ||| |  |||||||||| |||||||||||||||    
T  318099 taggctaaaatatggttttaatccctgcaaatatgtttcgttttggttttagtc 318046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 3414753 - 3414696
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctgc 363  Q
    ||||||||||||| |||| |||| | ||||||||| | ||||||||||||||| ||||    
T  3414753 aggctaaaatatggttttggtccctgtaaatatgtctcgttttggttttagtccctgc 3414696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 14428948 - 14428899
Alignment:
Q  309 ctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||| |||||||||||  ||||||| || |||||||||||||||    
T  14428948 ctaaaatatggttttagtccttgcaaatatgcttcgttttggttttagtc 14428899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 14655377 - 14655430
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  ||||||| || |||||||||||||||    
T  14655377 taggctaaaatatggttttagtccctgcaaatatgcttcgttttggttttagtc 14655430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 25431856 - 25431803
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  25431856 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 25431803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 6468309 - 6468361
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  ||||||| || |||||||||||||||    
T  6468309 aggctaaaatatggttttagtccctgcaaatatgctttgttttggttttagtc 6468361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 9896638 - 9896586
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  9896638 aggctaaaatatggttttagtccctgcaaatatgtcttgttttggttttagtc 9896586  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 10091039 - 10091087
Alignment:
Q  310 taaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||| ||||||||| |  |||||||||| |||||||||||||||    
T  10091039 taaaatatggttttagtccctgcaaatatgtttcgttttggttttagtc 10091087  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 14656261 - 14656209
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||| ||||||  |||||||| | |||||||||||||||    
T  14656261 aggctaaaatatggttttggtccttgcaaatatgtctcgttttggttttagtc 14656209  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 30928680 - 30928732
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  30928680 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 30928732  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 31398542 - 31398490
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||||||| |  |||||||| |  ||||||||||||||    
T  31398542 aggctaaaatatgattttagtccctgcaaatatgtctcattttggttttagtc 31398490  T

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Target: scaffold0326 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 4039 - 4092
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  4039 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 4092  T

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Target: scaffold0326; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 19221 - 19274
Alignment:
Q  305 taggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    |||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  19221 taggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 19274  T

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Target: scaffold0160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 358
Target Start/End: Complemental strand, 27374 - 27313
Alignment:
Q  297 ttaaaatctaggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||| |||||||||||||| |||| |||| |  |||||||| | |||||||||||||||    
T  27374 ttaaaatttaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtc 27313  T

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Target: scaffold0811 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 1310 - 1362
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  1310 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 1362  T

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Target: scaffold0373 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 8546 - 8598
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||||||||||||| |  |||||||  | |||||||||||||||    
T  8546 aggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtc 8598  T

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Target: scaffold0370 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 290 - 238
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  290 aggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtc 238  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 17126 - 17174
Alignment:
Q  309 ctaaaatatgattttagtccttataaatatgtttggttttggttttagt 357  Q
    |||||||||| |||| |||| |  |||||||||||||||||||||||||    
T  17126 ctaaaatatggttttggtccctccaaatatgtttggttttggttttagt 17174  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 54814 - 54866
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| |||||||||||  |||||||  | |||||||||||||||    
T  54814 aggctaaaatatggttttagtccttgcaaatatgcctcgttttggttttagtc 54866  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 5398 - 5454
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtctctg 362  Q
    ||||||||||||| ||||||||| |  |||||||  | |||||||||||||||||||    
T  5398 aggctaaaatatggttttagtccctgcaaatatgccttgttttggttttagtctctg 5454  T

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Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 5709 - 5657
Alignment:
Q  306 aggctaaaatatgattttagtccttataaatatgtttggttttggttttagtc 358  Q
    ||||||||||||| ||||||||| |  |||||||| | |||||||||||||||    
T  5709 aggctaaaatatggttttagtccctgcaaatatgtcttgttttggttttagtc 5657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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