View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17581_high_18 (Length: 314)
Name: NF17581_high_18
Description: NF17581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17581_high_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 35 - 314
Target Start/End: Original strand, 50470 - 50749
Alignment:
| Q |
35 |
agcatccatttatttattcaatgtataacttctgaatcactcttaaaacacaaacaatttacgacctctaaaaatgaagttcaaattttatagaaaatgt |
134 |
Q |
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| T |
50470 |
agcatccatttatttattcaatgtataacttctgaatcactcttaaaacacaaacaatttacgacctctaaaaatgaagttcaaattttatagaaaatgt |
50569 |
T |
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| Q |
135 |
tgaagcctattttagcgagaagccttctaagtgaccccatcccggacttccaaagtaggagcaatttaatctcttgttttagatcttcaagttttgacaa |
234 |
Q |
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| T |
50570 |
tgaagcctattttagcgagaagccttctaagtgaccccatcccggacttccaaagtaggagcaatttaatctcttgttttagatcttcaagttttgacaa |
50669 |
T |
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| Q |
235 |
gaaaacatgtttaatgacatgtattattattacgaaatgagtgaattactaaaaagcttgtagtagaagattctaaattt |
314 |
Q |
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||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| |
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| T |
50670 |
gaaaacatgtttaatgacatgtattattattactaaatgaatgaattactaaaaagtttgtagtagaagattctaaattt |
50749 |
T |
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