View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17581_high_26 (Length: 275)
Name: NF17581_high_26
Description: NF17581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17581_high_26 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 275
Target Start/End: Complemental strand, 50947 - 50688
Alignment:
| Q |
16 |
atgtgaatgattgagtaatggggagttttatttgttagagaagaaattctatgtttgaggaggaaagtcaatattggtgattggaaaaattgnnnnnnnt |
115 |
Q |
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| T |
50947 |
atgtgaatgattgagtaatggggagttttatttgttagagaagaaattctatgtttgaggaggaaagtcaatattggtgattggaaaaattgaaaaaaat |
50848 |
T |
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| Q |
116 |
ggaattgcaaacattaaggattataagccaaagaaaaagatatggataagatacgcatccttgtgaacacggcgtcacgaatttggacctagatcaataa |
215 |
Q |
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| T |
50847 |
ggaattgcaaacattaaggattataagccaaagaaaaagatatggataagatacgcatccttgtgaacacggcgtcacgaatttggacctagatcaataa |
50748 |
T |
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| Q |
216 |
atttagaatcttctactacaaactttttagtaattcattaatttagaaatactaatacat |
275 |
Q |
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| T |
50747 |
atttagaatcttctactacaaactttttagtaattcattcatttagtaataataatacat |
50688 |
T |
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