View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17581_low_31 (Length: 250)

Name: NF17581_low_31
Description: NF17581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17581_low_31
NF17581_low_31
[»] chr1 (7 HSPs)
chr1 (106-236)||(49193134-49193265)
chr1 (101-236)||(8998761-8998897)
chr1 (96-188)||(50290342-50290435)
chr1 (118-188)||(39268263-39268333)
chr1 (138-188)||(52407913-52407963)
chr1 (190-232)||(45914122-45914164)
chr1 (143-186)||(45914054-45914097)
[»] chr2 (10 HSPs)
chr2 (143-236)||(37073461-37073554)
chr2 (101-176)||(12008479-12008555)
chr2 (101-188)||(37995376-37995464)
chr2 (129-188)||(10128586-10128645)
chr2 (114-175)||(25882672-25882733)
chr2 (133-178)||(17069855-17069900)
chr2 (133-178)||(17075917-17075962)
chr2 (133-178)||(17096464-17096509)
chr2 (190-240)||(44240599-44240649)
chr2 (190-232)||(37995311-37995353)
[»] chr3 (10 HSPs)
chr3 (101-188)||(49067080-49067168)
chr3 (114-188)||(48314578-48314652)
chr3 (101-188)||(40823610-40823698)
chr3 (101-187)||(13495951-13496038)
chr3 (133-188)||(38362804-38362859)
chr3 (101-188)||(51657252-51657340)
chr3 (114-188)||(5557894-5557968)
chr3 (135-172)||(9764395-9764432)
chr3 (101-188)||(49453231-49453319)
chr3 (144-188)||(8235196-8235240)
[»] chr8 (9 HSPs)
chr8 (124-230)||(37063866-37063972)
chr8 (130-240)||(45261986-45262096)
chr8 (101-188)||(41842820-41842908)
chr8 (114-178)||(16913162-16913227)
chr8 (101-177)||(34893024-34893101)
chr8 (126-188)||(15096723-15096786)
chr8 (134-188)||(25629537-25629591)
chr8 (140-188)||(24255298-24255346)
chr8 (207-236)||(8628153-8628182)
[»] chr4 (18 HSPs)
chr4 (114-188)||(11653588-11653662)
chr4 (101-177)||(24539282-24539359)
chr4 (101-188)||(46420751-46420839)
chr4 (101-178)||(49748218-49748296)
chr4 (101-188)||(2527710-2527798)
chr4 (124-188)||(4875454-4875518)
chr4 (114-188)||(1326082-1326156)
chr4 (101-178)||(40682126-40682204)
chr4 (117-178)||(12758477-12758538)
chr4 (124-177)||(23633373-23633426)
chr4 (101-188)||(9061526-9061614)
chr4 (124-188)||(54243707-54243771)
chr4 (130-188)||(42351126-42351184)
chr4 (101-165)||(49357920-49357985)
chr4 (128-177)||(22455156-22455205)
chr4 (190-236)||(23633243-23633289)
chr4 (144-188)||(23633312-23633355)
chr4 (138-166)||(48809348-48809376)
[»] scaffold0090 (1 HSPs)
scaffold0090 (101-177)||(12588-12665)
[»] chr7 (16 HSPs)
chr7 (101-188)||(729015-729103)
chr7 (124-188)||(26455248-26455312)
chr7 (114-188)||(29322641-29322715)
chr7 (114-188)||(36159438-36159512)
chr7 (101-178)||(38029654-38029732)
chr7 (124-188)||(16718889-16718953)
chr7 (124-188)||(17693099-17693163)
chr7 (101-188)||(39703883-39703971)
chr7 (101-188)||(40462315-40462403)
chr7 (115-177)||(34405069-34405131)
chr7 (133-188)||(24396474-24396529)
chr7 (142-188)||(2732828-2732874)
chr7 (142-188)||(20078067-20078113)
chr7 (133-178)||(15237466-15237511)
chr7 (190-236)||(38029574-38029620)
chr7 (190-235)||(728956-729001)
[»] scaffold1155 (2 HSPs)
scaffold1155 (101-188)||(68-156)
scaffold1155 (190-236)||(179-225)
[»] scaffold0891 (1 HSPs)
scaffold0891 (101-188)||(1259-1347)
[»] scaffold0642 (2 HSPs)
scaffold0642 (101-188)||(150-238)
scaffold0642 (190-236)||(81-127)
[»] scaffold0345 (2 HSPs)
scaffold0345 (101-188)||(10061-10149)
scaffold0345 (190-236)||(9992-10038)
[»] scaffold0105 (2 HSPs)
scaffold0105 (101-188)||(28831-28919)
scaffold0105 (190-236)||(28942-28988)
[»] chr6 (4 HSPs)
chr6 (101-188)||(26898835-26898923)
chr6 (126-188)||(14365972-14366034)
chr6 (116-158)||(33004221-33004263)
chr6 (124-188)||(28078647-28078711)
[»] chr5 (11 HSPs)
chr5 (101-188)||(19121283-19121371)
chr5 (124-188)||(17413526-17413590)
chr5 (130-175)||(5399100-5399145)
chr5 (124-178)||(35392148-35392202)
chr5 (101-188)||(42691629-42691717)
chr5 (140-177)||(41040985-41041022)
chr5 (143-188)||(43622698-43622743)
chr5 (138-172)||(18241397-18241431)
chr5 (146-188)||(32720040-32720082)
chr5 (133-178)||(17546621-17546666)
chr5 (101-188)||(25480218-25480304)
[»] scaffold0210 (2 HSPs)
scaffold0210 (101-175)||(17760-17835)
scaffold0210 (101-175)||(25652-25727)
[»] scaffold0246 (1 HSPs)
scaffold0246 (133-188)||(8829-8884)
[»] scaffold1449 (1 HSPs)
scaffold1449 (133-178)||(171-216)
[»] scaffold0044 (2 HSPs)
scaffold0044 (117-188)||(87836-87907)
scaffold0044 (186-232)||(87771-87817)
[»] scaffold0108 (1 HSPs)
scaffold0108 (101-178)||(13602-13679)


Alignment Details
Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 49193134 - 49193265
Alignment:
Q  106 accattga-ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtcaaaatattaagaatcct 204  Q
    |||||||| ||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | |    
T  49193134 accattgatccgtgctaacgcacgtgtcatattgaatgtaatatttgacggtaataggtaacaaaataatttagttgaatgtcaaaatattaagaagcat 49193233  T
Q  205 atacgttggtattgtaccataacataatattt 236  Q
    ||||||||||| ||||||||||||||||||||    
T  49193234 atacgttggtactgtaccataacataatattt 49193265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 8998897 - 8998761
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtcaaaatattaaga 199  Q
    ||||||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  8998897 actagaccattgacccgtgctaacgcacaggtcatatcgaatgtaatatttgacggtaataggtaacaaaatagtttagttgaaggtcaaaatactaaga 8998798  T
Q  200 atcctatacgttggtattgtaccataacataatattt 236  Q
    | | |||| ||||||| | ||||||||||||||||||    
T  8998797 agcatatatgttggtactctaccataacataatattt 8998761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 50290435 - 50290342
Alignment:
Q  96 gatacactagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||| |||||||||| |||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||  |||||||||||| | |||||||    
T  50290435 gatatactagaccatcgacccgtgctaacgcacgggtcatatggaacgtaatatttgacggtaataggtagaaaaatagtttagatgaatgtca 50290342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 39268263 - 39268333
Alignment:
Q  118 gctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||||||||| || ||||| | |||||||    
T  39268263 gctaacgcacgggtcatatcgaatgtaatatttgacgataataggtaacaaagtactttagatgaatgtca 39268333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 52407913 - 52407963
Alignment:
Q  138 gaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  52407913 gaaggtaacatttgacggtaataggtaacaaaatagtttagatgaatgtca 52407963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 45914122 - 45914164
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataat 232  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  45914122 aatattaagaatcatagacgttggtattgtaccataacataat 45914164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 45914054 - 45914097
Alignment:
Q  143 taatatttgacggtaataggtaacaaaatagtttagttaaatgt 186  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||    
T  45914054 taatatttgatggtaataggtaacaaaatattttagataaatgt 45914097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 37073554 - 37073461
Alignment:
Q  143 taatatttgacggtaataggtaacaaaatagtttagttaaatgtcaaaatattaagaatcctatacgttggtattgtaccataacataatattt 236  Q
    ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  37073554 taatatttgacagtaataggtaacaaaatagtttagttgaaggtcaaaatattaagaagcatatacgttggtatagtaccataacataatattt 37073461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 12008479 - 12008555
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagttt 176  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  12008479 actagaccattgacccgtgctaacacacgggtcatatcgaaggtaatatttgacagtaatagataacaaaatagttt 12008555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 37995464 - 37995376
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| |||||||  ||||| |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  37995464 actagaccatcgacccgtgctaacacacggatcatatggaaggtaatatttgacggtagtaggtaacaaaatagtttagataaatgtca 37995376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 10128586 - 10128645
Alignment:
Q  129 ggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  10128586 ggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 10128645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 25882672 - 25882733
Alignment:
Q  114 ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 175  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  25882672 ccgtgctaacgcacatgtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 25882733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 17069900 - 17069855
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  17069900 atatggaaggtaatatttgacggtaataggtaacaaaatagtttag 17069855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 17075962 - 17075917
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  17075962 atatggaaggtaatatttgacggtaataggtaacaaaatagtttag 17075917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 17096509 - 17096464
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  17096509 atatggaaggtaatattttacggtaataggtaacaaaatagtttag 17096464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 44240599 - 44240649
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataatattttcat 240  Q
    ||||||||||| | || ||||||||| ||||||||||||||||||||||||    
T  44240599 aatattaagaagcatagacgttggtactgtaccataacataatattttcat 44240649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 37995353 - 37995311
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataat 232  Q
    ||||||||||| | || ||||||||||||||||||||||||||    
T  37995353 aatattaagaagcatagacgttggtattgtaccataacataat 37995311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 49067080 - 49067168
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  49067080 actagaccatcgacccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 49067168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 48314652 - 48314578
Alignment:
Q  114 ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  48314652 ccgtgctaacgtacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 48314578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 40823698 - 40823610
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| | |||||||    
T  40823698 actagaccatcgacccgtgctaaggcacgggtcatatggaaggtaatatttgaccgtaataggtaaaaaaatagtttagatgaatgtca 40823610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 13496038 - 13495951
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtc 187  Q
    |||||||||| |||| ||||||| | | |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  13496038 actagaccatcgacccgtgctaacgtaagggtcatatcgaaggtaatatttgacggtaataggtaataaaatagtttagatgaatgtc 13495951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 38362859 - 38362804
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  38362859 atatcgaaggtaatatttgacggtaatatgtaataaaatagtttagttgaatgtca 38362804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 51657340 - 51657252
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| ||||  ||||||| ||||||||||||||| ||||| | ||||||||||||||||| | |||||||    
T  51657340 actagaccatcgacccgtgctaacgcacatgtcatatggaaggtaatatttgagggtaacaagtaacaaaatagtttagatgaatgtca 51657252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 5557968 - 5557894
Alignment:
Q  114 ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||| |||| |||||||| ||| ||||||||||| | ||||||||||||||||| ||||| | |||||||    
T  5557968 ccgtgctaacgcacaggtcatatggaatgtaatatttgatgataataggtaacaaaataatttagatgaatgtca 5557894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 9764395 - 9764432
Alignment:
Q  135 atcgaaggtaatatttgacggtaataggtaacaaaata 172  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9764395 atcgaaggtaatatttgacggtaataggtaacaaaata 9764432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 49453231 - 49453319
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||  || |||| ||||| ||||||||||||| |  |||||| ||| |||||||||||||||||||||||    
T  49453231 actagaccatcgacctgtgctatcgcgcgggacatattgaaggtaatattttatagtaatatgtagcaaaatagtttagttaaatgtca 49453319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 8235240 - 8235196
Alignment:
Q  144 aatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||||| ||| ||||||||||||||||||| | |||||||    
T  8235240 aatatttgacgataacaggtaacaaaatagtttagatgaatgtca 8235196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 37063972 - 37063866
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtcaaaatattaagaatcctatacgttggtattgtacca 223  Q
    ||||||||||||||||| ||||||||||||  ||||| ||||||||||||||||||| ||  | |||||||||| || | |||||||||||| |||||||    
T  37063972 gcacgggtcatatcgaaagtaatatttgacaataataagtaacaaaatagtttagttgaagattaaaatattaaaaagcatatacgttggtactgtacca 37063873  T
Q  224 taacata 230  Q
    |||||||    
T  37063872 taacata 37063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 45261986 - 45262096
Alignment:
Q  130 gtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtcaaaatattaagaatcctatacgttggtattgtaccataacat 229  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||||| | || |||||||||||||||| | |||  |||| ||||||||  ||||||    
T  45261986 gtcatatcgattgtaatatttgtcggtaataggtaacaaaatagtttagctgaaggtcaaaatattaagaagcatatttgttgatattgtactttaacat 45262085  T
Q  230 aatattttcat 240  Q
    |||||||||||    
T  45262086 aatattttcat 45262096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 41842820 - 41842908
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| |||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||| | |||||||    
T  41842820 actagaccatcgacccgtgctaatgcacaggtcatatggaaagtaatatctgacggtaataggtaacaaaatagtttagatgaatgtca 41842908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 16913162 - 16913227
Alignment:
Q  114 ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggt-aacaaaatagtttag 178  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  16913162 ccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaatatgtaaacaaaatagtttag 16913227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 34893024 - 34893101
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagttta 177  Q
    ||||||||||||||| ||||||| ||||  ||||||  || |||||||||||||||||||||||||||||| ||||||    
T  34893024 actagaccattgacccgtgctaacgcacaagtcataaggagggtaatatttgacggtaataggtaacaaaacagttta 34893101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 15096723 - 15096786
Alignment:
Q  126 acgggtcatatcgaaggtaatatttgacggtaatagg-taacaaaatagtttagttaaatgtca 188  Q
    |||||| |||||||||||||||||||| ||||||||| ||| |||||||||||| | |||||||    
T  15096723 acgggttatatcgaaggtaatatttgatggtaataggttaaaaaaatagtttagatgaatgtca 15096786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 25629537 - 25629591
Alignment:
Q  134 tatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||||||||||| || ||| | ||||||||||||||||||| |||||||    
T  25629537 tatcgaaggtaatatttggcgctaacatgtaacaaaatagtttagttgaatgtca 25629591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 24255346 - 24255298
Alignment:
Q  140 aggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||| |||| ||||||||||||||||||||||||||| | |||||||    
T  24255346 aggtaacatttaacggtaataggtaacaaaatagtttagatgaatgtca 24255298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 8628153 - 8628182
Alignment:
Q  207 acgttggtattgtaccataacataatattt 236  Q
    ||||||||||||||||||||||||||||||    
T  8628153 acgttggtattgtaccataacataatattt 8628182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 11653588 - 11653662
Alignment:
Q  114 ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | |||||||    
T  11653588 ccgtgctaatgcacgggtcatatggaaggtaatatttgacggtaataggtaataaaatagtttagatgaatgtca 11653662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 24539359 - 24539282
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagttta 177  Q
    |||||||||| |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24539359 actagaccatcgaccagtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagttta 24539282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 46420839 - 46420751
Alignment:
Q  101 actagaccattga-ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| || ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  46420839 actagaccatcgatccgtgctaatgcacaagtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 46420751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 49748218 - 49748296
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||||||||| |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  49748218 actagaccatcgacccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtagcaaaatagtttag 49748296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 2527798 - 2527710
Alignment:
Q  101 actagaccattga-ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| || ||||||||| ||||  ||||||| |||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  2527798 actagaccatcgatccgtgctaacgcacatgtcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatgtca 2527710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 4875454 - 4875518
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  4875454 gcacgggtcatatggaaggtaatatttgacgttaataggtaacaaaatagtttagatgaatgtca 4875518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 1326156 - 1326082
Alignment:
Q  114 ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||  ||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||    
T  1326156 ccgtgctatcgcacgcgtcatatcgaaggtaatatttgacagtaacatgtaacaaaatagtttagttgaatgtca 1326082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 40682126 - 40682204
Alignment:
Q  101 actagaccattgaccg-tgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||||| ||||||||  |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  40682126 actagatcattgacccatgctaacgcacgggacatatcgaaggtaatatttaacggcaataggtaacaaaatagtttag 40682204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 12758477 - 12758538
Alignment:
Q  117 tgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  12758477 tgctaacgtacgggtcatatggaaggtaatatttgacggtaataagtaacaaaatagtttag 12758538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 23633373 - 23633426
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagttta 177  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  23633373 gcacgggtcataccgaaggtaatatttgacggtaatagataacaaaatagttta 23633426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 9061614 - 9061526
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| |||  |||||||| ||| ||||||||| ||||||||||||||||||||||||||| | |||||||    
T  9061614 actagaccatcgacccgtgctaacgcataggtcatatggaatgtaatatttaacggtaataggtaacaaaatagtttagatgaatgtca 9061526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 54243771 - 54243707
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||||||||||||  |||||||||    
T  54243771 gcacgggtcatatggaagttaatatttgacgataataggtaacaaaatagtttaaataaatgtca 54243707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 42351184 - 42351126
Alignment:
Q  130 gtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  42351184 gtcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatgtca 42351126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 49357985 - 49357920
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaa 165  Q
    |||||||||| |||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  49357985 actagaccatcgacccgtgctaacgcactggtcatatggaaggtaatatttgacggtaataggtaa 49357920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 22455205 - 22455156
Alignment:
Q  128 gggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagttta 177  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  22455205 gggtcatatggaaggtaatatttgacggtaataagtaataaaatagttta 22455156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 23633289 - 23633243
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataatattt 236  Q
    ||||||||||| | || ||||||||| ||||||||||||||||||||    
T  23633289 aatattaagaaccatagacgttggtactgtaccataacataatattt 23633243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 23633355 - 23633312
Alignment:
Q  144 aatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||||||| |||||||||||||||||||  |||||||||    
T  23633355 aatatttgacggta-taggtaacaaaatagtttaaataaatgtca 23633312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 48809376 - 48809348
Alignment:
Q  138 gaaggtaatatttgacggtaataggtaac 166  Q
    |||||||||||||||||||||||||||||    
T  48809376 gaaggtaatatttgacggtaataggtaac 48809348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 12588 - 12665
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagttta 177  Q
    |||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  12588 actagaccatcgacccgtgctaatgcacgggtcatatggaatgtaatatttgacggtaataggtaacaaaatagttta 12665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 729103 - 729015
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  729103 actagaccatcgacccgtgctaacgtacgggtcatatcgaaggtaatatttgacggtaataggtaaccaaatagtttagatgaatgtca 729015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 26455312 - 26455248
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  26455312 gcacgggtcatatcgaaggtaatatttgacggtaatagataacaaaatagtttagataaatgtca 26455248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 29322715 - 29322641
Alignment:
Q  114 ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  29322715 ccgtgctaacgcaccggtcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatgtca 29322641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 36159512 - 36159438
Alignment:
Q  114 ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  36159512 ccgtgctaacgcacgagtcatatgaaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 36159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 38029732 - 38029654
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||||||||| |||| |||||||  ||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  38029732 actagaccatcgacccgtgctaacacacggatcatattgaaggtaatatttgacggtaataggtaacaaaatagtttag 38029654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 16718953 - 16718889
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  16718953 gcacgggttatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 16718889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 17693163 - 17693099
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  17693163 gcacgggttatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 17693099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 39703883 - 39703971
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| ||||||||||| |||||||||| || ||||||||||||||| ||||||||||||| | |||||||    
T  39703883 actagaccatcgacccgtgctaacgcacgggtcatttcgaaggtaaaatatgacggtaataggtagcaaaatagtttagatgaatgtca 39703971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 40462315 - 40462403
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| |||||||||||||  |||||||||||||| |||||| ||||| |||||||||||| | |||||||    
T  40462315 actagaccatcgacccgtgctaacgcacgggtcatatgaaaggtaatatttgatggtaattggtaataaaatagtttagatgaatgtca 40462403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 34405069 - 34405131
Alignment:
Q  115 cgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagttta 177  Q
    |||||||| | |||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  34405069 cgtgctaacgtacgggtaatatggaaggtaatatttgacggtaataagtaacaaaatagttta 34405131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 24396474 - 24396529
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  24396474 atatggaaggtaatatttgacggtaataggtaacaaaataatttagatgaatgtca 24396529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 2732828 - 2732874
Alignment:
Q  142 gtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  2732828 gtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 2732874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 20078113 - 20078067
Alignment:
Q  142 gtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  20078113 gtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 20078067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 15237511 - 15237466
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||    
T  15237511 atatagaaggtaataattgacggtaataggtaacaaaattgtttag 15237466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 38029620 - 38029574
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataatattt 236  Q
    ||||||||||| | || ||||||||| ||||||||||||||||||||    
T  38029620 aatattaagaagcatagacgttggtactgtaccataacataatattt 38029574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 729001 - 728956
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataatatt 235  Q
    ||||||||||| | || ||||||||| |||||||||||||||||||    
T  729001 aatattaagaagcatagacgttggtactgtaccataacataatatt 728956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 68 - 156
Alignment:
Q  101 actagaccattgaccg-tgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| ||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||    
T  68 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtca 156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 179 - 225
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataatattt 236  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||    
T  179 aatattaagaagcataaacgttggtattgtaccataacataatattt 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 1259 - 1347
Alignment:
Q  101 actagaccattga-ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| || ||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||||| | |||||||    
T  1259 actagaccatcgatccgtgctaacgcacgggtcatatggaaggtaatatttgacagtaatagataacaaaatagtttagatgaatgtca 1347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 238 - 150
Alignment:
Q  101 actagaccattgaccg-tgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| ||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||    
T  238 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtca 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 127 - 81
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataatattt 236  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||    
T  127 aatattaagaagcataaacgttggtattgtaccataacataatattt 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 10149 - 10061
Alignment:
Q  101 actagaccattgaccg-tgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| ||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||    
T  10149 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtca 10061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 10038 - 9992
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataatattt 236  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||    
T  10038 aatattaagaagcataaacgttggtattgtaccataacataatattt 9992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 28831 - 28919
Alignment:
Q  101 actagaccattgaccg-tgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| ||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||    
T  28831 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtca 28919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 28942 - 28988
Alignment:
Q  190 aatattaagaatcctatacgttggtattgtaccataacataatattt 236  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||    
T  28942 aatattaagaagcataaacgttggtattgtaccataacataatattt 28988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 26898835 - 26898923
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  26898835 actagaccatcgacccgtgctaccacacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 26898923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 14365972 - 14366034
Alignment:
Q  126 acgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||| |||||||||||| ||||||||| ||||||||  ||||||||||||||| |||||||||    
T  14365972 acggatcatatcgaaggcaatatttgatggtaatagaaaacaaaatagtttagataaatgtca 14366034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 33004221 - 33004263
Alignment:
Q  116 gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaa 158  Q
    ||||||| ||||||||||||| || ||||||||||||||||||    
T  33004221 gtgctaaagcacgggtcatatggatggtaatatttgacggtaa 33004263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 28078647 - 28078711
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||||||||||||||||||||  | || | | ||||||||| |||||| || |||||||    
T  28078647 gcacgggtcatatcgaaggtaatatttagcagtgacatgtaacaaaagagtttaattgaatgtca 28078711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 19121283 - 19121371
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| |||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  19121283 actagaccatcgacccgtgctaacgcactggtcatatggaaggtaatatttcacggtaataggtaacaaaatagtttagatgaatgtca 19121371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 17413526 - 17413590
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  17413526 gcacggatcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 17413590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 5399145 - 5399100
Alignment:
Q  130 gtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5399145 gtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 5399100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 35392148 - 35392202
Alignment:
Q  124 gcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  35392148 gcacgggtgatatggaaagtaatatttgacggtaataggtaacaaaatagtttag 35392202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 42691629 - 42691717
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| ||| |||  |||||||||||||||| | |||||||    
T  42691629 actagaccatcgacctgtgctaacgcacgagtcatatggaaggtaatatttgatggtgatatctaacaaaatagtttagatgaatgtca 42691717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 41040985 - 41041022
Alignment:
Q  140 aggtaatatttgacggtaataggtaacaaaatagttta 177  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41040985 aggtaatatttgacggtaataggtaacaaaatagttta 41041022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 43622743 - 43622698
Alignment:
Q  143 taatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||||||||||||||||||||||||||||| | |||||||    
T  43622743 taatatttgacggtaataggtaacaaaatagtttagatgaatgtca 43622698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 18241397 - 18241431
Alignment:
Q  138 gaaggtaatatttgacggtaataggtaacaaaata 172  Q
    |||||||||||||||||||||||||||||||||||    
T  18241397 gaaggtaatatttgacggtaataggtaacaaaata 18241431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 32720082 - 32720040
Alignment:
Q  146 tatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  32720082 tatttgacggtaataggtaacaaaatagtttagatgaatgtca 32720040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 17546621 - 17546666
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||    
T  17546621 atatagaaggtaataattgacggtaataggtaacaaaattgtttag 17546666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 25480218 - 25480304
Alignment:
Q  101 actagaccattga-ccgtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||||||| || ||||||||| | | |||| || | |||||||||||||| ||||||||||||||  |||||||||| | |||||||    
T  25480218 actagaccatcgatccgtgctaacgtatgggttatctggaaggtaatatttgtcggtaataggtaac--aatagtttagatgaatgtca 25480304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 17835 - 17760
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 175  Q
    |||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  17835 actagaccatcgacccgtgctaatgcacgagtcatttcgaaggtaatatttgacggtaatatgtaacaaaatagtt 17760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 25727 - 25652
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 175  Q
    |||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  25727 actagaccatcgacccgtgctaatgcacgagtcatttcgaaggtaatatttgacggtaatatgtaacaaaatagtt 25652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 8829 - 8884
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  8829 atatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtca 8884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1449 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 216 - 171
Alignment:
Q  133 atatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  216 atatggaaggtaatatttgacggtaataggtaacaaaatagtttag 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 87907 - 87836
Alignment:
Q  117 tgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagttaaatgtca 188  Q
    |||||| ||||| |||||||  ||| |||||||||||||||||| ||||||||||||||||| | |||||||    
T  87907 tgctaacgcacgagtcatatgaaagataatatttgacggtaatatgtaacaaaatagtttagatgaatgtca 87836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 87817 - 87771
Alignment:
Q  186 tcaaaatattaagaatcctatacgttggtattgtaccataacataat 232  Q
    ||||||||||||||| | || ||||||||| ||||||||||||||||    
T  87817 tcaaaatattaagaagcatagacgttggtactgtaccataacataat 87771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 13602 - 13679
Alignment:
Q  101 actagaccattgacc-gtgctaatgcacgggtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttag 178  Q
    |||||||||| |||| ||||||| |||| ||| ||||||||| || ||||||| |||||||| ||||||||||||||||    
T  13602 actagaccatcgacccgtgctaacgcacaggttatatcgaagata-tatttgatggtaatagataacaaaatagtttag 13679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University