View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17582_high_8 (Length: 259)
Name: NF17582_high_8
Description: NF17582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17582_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 9924051 - 9923804
Alignment:
| Q |
1 |
tttatgtgcaaactatattttttggctatttcttttagttctttatgcaactattatatatagagttgagtcagaaaaatgggatttgtttggttatttg |
100 |
Q |
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| T |
9924051 |
tttatgtgcaaactatattttttggctatttcttttagttctttatgcaactattatatatagagttgagtcagaaaaatgggatttgtttggttatttg |
9923952 |
T |
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| Q |
101 |
gagtctacttgtcaatgtcttagcaaaagatgaatgataagtaaaatgattagaatttctacttatcaatgttttcttttgagtttaactattaaactaa |
200 |
Q |
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| T |
9923951 |
gagtctacttgtcaatgtcttagcaaaagatgaatgataagt-aaattattagaatttctacttatcaatgttttcttttgagtttaactattaaactaa |
9923853 |
T |
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| Q |
201 |
gaagatagtgggatcttatattccattttccatgcttttttcttctctc |
249 |
Q |
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| T |
9923852 |
gaagatagtgggatcttatattccattttccatgcttttttcttctctc |
9923804 |
T |
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