View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17582_low_2 (Length: 498)

Name: NF17582_low_2
Description: NF17582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17582_low_2
NF17582_low_2
[»] chr5 (10 HSPs)
chr5 (29-400)||(6053467-6053839)
chr5 (411-443)||(6053415-6053447)
chr5 (433-473)||(29619468-29619508)
chr5 (440-473)||(12360785-12360818)
chr5 (440-473)||(34163120-34163153)
chr5 (441-473)||(3633920-3633952)
chr5 (441-473)||(4060825-4060857)
chr5 (441-473)||(34382072-34382104)
chr5 (441-473)||(35869928-35869960)
chr5 (441-473)||(42940763-42940795)
[»] chr4 (19 HSPs)
chr4 (441-473)||(52920834-52920866)
chr4 (430-473)||(30088848-30088891)
chr4 (435-473)||(41608840-41608878)
chr4 (440-473)||(10555346-10555379)
chr4 (440-473)||(42507786-42507819)
chr4 (440-473)||(43587663-43587696)
chr4 (441-473)||(2401219-2401251)
chr4 (441-473)||(4294179-4294211)
chr4 (441-473)||(23621637-23621669)
chr4 (441-473)||(23949788-23949820)
chr4 (441-473)||(29832793-29832825)
chr4 (441-473)||(31648584-31648616)
chr4 (441-473)||(34016766-34016798)
chr4 (441-473)||(41858712-41858744)
chr4 (441-473)||(48380572-48380604)
chr4 (441-473)||(49236009-49236041)
chr4 (441-473)||(51817194-51817226)
chr4 (441-473)||(55968540-55968572)
chr4 (441-473)||(55984364-55984396)
[»] chr2 (12 HSPs)
chr2 (441-473)||(44710085-44710117)
chr2 (440-475)||(27244919-27244954)
chr2 (440-473)||(325382-325415)
chr2 (440-473)||(3628635-3628668)
chr2 (440-473)||(36443511-36443544)
chr2 (441-473)||(19002904-19002936)
chr2 (441-473)||(22060978-22061010)
chr2 (441-473)||(31909828-31909860)
chr2 (441-473)||(39407775-39407807)
chr2 (441-473)||(39927741-39927773)
chr2 (441-473)||(40833467-40833499)
chr2 (440-472)||(41095923-41095955)
[»] chr1 (18 HSPs)
chr1 (441-473)||(26834827-26834859)
chr1 (441-473)||(42709675-42709707)
chr1 (442-473)||(22172679-22172710)
chr1 (440-473)||(3552810-3552843)
chr1 (440-473)||(6920980-6921013)
chr1 (440-473)||(16436053-16436086)
chr1 (440-473)||(24589496-24589529)
chr1 (440-473)||(32145351-32145384)
chr1 (440-473)||(38238864-38238897)
chr1 (440-473)||(46160336-46160369)
chr1 (440-473)||(49251815-49251848)
chr1 (440-473)||(50942617-50942650)
chr1 (440-473)||(52688133-52688166)
chr1 (441-473)||(16010915-16010947)
chr1 (441-473)||(18127333-18127365)
chr1 (441-473)||(23624838-23624870)
chr1 (441-473)||(24583828-24583860)
chr1 (441-473)||(41529108-41529140)
[»] chr3 (15 HSPs)
chr3 (442-473)||(45674324-45674355)
chr3 (440-473)||(8108433-8108466)
chr3 (440-473)||(19961076-19961109)
chr3 (440-473)||(25904159-25904192)
chr3 (440-473)||(29651991-29652024)
chr3 (440-473)||(34817155-34817188)
chr3 (440-473)||(43599568-43599601)
chr3 (440-473)||(52060522-52060555)
chr3 (441-473)||(3671631-3671663)
chr3 (441-473)||(7674157-7674189)
chr3 (441-473)||(21216917-21216949)
chr3 (441-473)||(38783692-38783724)
chr3 (441-473)||(43175733-43175765)
chr3 (441-473)||(45824136-45824168)
chr3 (440-468)||(48962824-48962852)
[»] chr8 (16 HSPs)
chr8 (439-473)||(16421857-16421891)
chr8 (440-473)||(16872611-16872644)
chr8 (440-473)||(19715225-19715258)
chr8 (440-473)||(29938288-29938321)
chr8 (440-473)||(37504988-37505021)
chr8 (445-473)||(6796101-6796129)
chr8 (441-473)||(8378340-8378372)
chr8 (441-473)||(22578204-22578236)
chr8 (441-473)||(23597260-23597292)
chr8 (441-473)||(23606182-23606214)
chr8 (441-473)||(27919676-27919708)
chr8 (441-473)||(31873670-31873702)
chr8 (441-473)||(38896709-38896741)
chr8 (441-473)||(39645959-39645991)
chr8 (441-473)||(40488139-40488171)
chr8 (441-473)||(42373257-42373289)
[»] chr7 (11 HSPs)
chr7 (440-473)||(9818082-9818115)
chr7 (440-473)||(10720007-10720040)
chr7 (440-473)||(24924422-24924455)
chr7 (440-473)||(45780900-45780933)
chr7 (440-473)||(45823209-45823242)
chr7 (441-473)||(1643756-1643788)
chr7 (441-473)||(10453158-10453190)
chr7 (441-473)||(22918172-22918204)
chr7 (441-473)||(23059069-23059101)
chr7 (441-473)||(46373253-46373285)
chr7 (441-473)||(47834402-47834434)
[»] chr6 (7 HSPs)
chr6 (440-473)||(10364722-10364755)
chr6 (441-473)||(2603646-2603678)
chr6 (441-473)||(3787091-3787123)
chr6 (441-473)||(4657822-4657854)
chr6 (441-473)||(6835711-6835743)
chr6 (441-473)||(8201459-8201491)
chr6 (441-473)||(15497840-15497872)
[»] scaffold0475 (1 HSPs)
scaffold0475 (441-473)||(5118-5150)
[»] scaffold0264 (1 HSPs)
scaffold0264 (441-473)||(18930-18962)


Alignment Details
Target: chr5 (Bit Score: 349; Significance: 0; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 29 - 400
Target Start/End: Complemental strand, 6053839 - 6053467
Alignment:
Q  29 gggggcctcctcaacttcccgttcatatatatgattataacttggacaaacattatatatatatgccagcttttgtgtttgtttatgt-acacatgatca 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6053839 gggggcctcctcaacttcccgttcatatatatgattataacttggacaaacattatatatatatgccagcttttgtgtttgtttatgttacacatgatca 6053740  T
Q  128 aatttaaataaatatcttggtccatgacaaaccatagtttggaataatcgttagattgaaatgatcaaatacctcctcctacggaacaaatcatgaatga 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6053739 aatttaaataaatatcttggtccatgacaaaccatagtttggaataatcgttagattgaaatgatcaaatacctcctcctacggaacaaatcatgaatga 6053640  T
Q  228 aaccaagatagaacaaaaattatttaatggttatctacgtctacatcttaggtagaaactccctggactgtacgcacgacacgtttgaaatgcaagtagg 327  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6053639 aaccaagatagaacaaaaattatttaatgtttatctacgtctacatcgtaggtagaaactccctggactgtacgcacgacacgtttgaaatgcaagtagg 6053540  T
Q  328 ggtgagaattcataggttgtctcacaaaggggttatggcctaacctacaataaataagatcatgttggaccag 400  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  6053539 ggtgagaattcataggttgtctcacaaagaggttatggcctaacctacaataaataagatcatgttgggccag 6053467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 6053447 - 6053415
Alignment:
Q  411 actaacattgaccaatatttactataaactata 443  Q
    |||||||||||||||||||||||||||||||||    
T  6053447 actaacattgaccaatatttactataaactata 6053415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 473
Target Start/End: Complemental strand, 29619508 - 29619468
Alignment:
Q  433 tataaactatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  29619508 tataaattatactccctccgtcccaaattgtatgtcacttt 29619468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 12360785 - 12360818
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  12360785 tatactccctccgtcccaaattgtatgtcacttt 12360818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 34163120 - 34163153
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  34163120 tatactccctccgtcccaaattgtatgtcacttt 34163153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 3633920 - 3633952
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  3633920 atactccctccgtcccaaattgtatgtcacttt 3633952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 4060857 - 4060825
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  4060857 atactccctccgtcccaaattgtatgtcacttt 4060825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 34382104 - 34382072
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  34382104 atactccctccgtcccaaattgtatgtcacttt 34382072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 35869928 - 35869960
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  35869928 atactccctccgtcccaaattgtatgtcacttt 35869960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 42940763 - 42940795
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  42940763 atactccctccgtcccaaattgtatgtcacttt 42940795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 52920866 - 52920834
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||||||||||||||||||||||||    
T  52920866 atactccctccatcccaaattgtatgtcacttt 52920834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 473
Target Start/End: Complemental strand, 30088891 - 30088848
Alignment:
Q  430 tactataaactatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||  ||||||||||| |||||||||||||||||||||    
T  30088891 tactataaataatactccctccgtcccaaattgtatgtcacttt 30088848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 435 - 473
Target Start/End: Complemental strand, 41608878 - 41608840
Alignment:
Q  435 taaactatactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  41608878 taaactatactccctccgtcccaaattgtatgtcgcttt 41608840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 10555379 - 10555346
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  10555379 tatactccctccgtcccaaattgtatgtcacttt 10555346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 42507819 - 42507786
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  42507819 tatactccctccgtcccaaattgtatgtcacttt 42507786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 43587663 - 43587696
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||| |||||||||||||||||||||||||    
T  43587663 tatactccttccatcccaaattgtatgtcacttt 43587696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 2401219 - 2401251
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  2401219 atactccctccgtcccaaattgtatgtcacttt 2401251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 4294211 - 4294179
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  4294211 atactccctccgtcccaaattgtatgtcacttt 4294179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 23621637 - 23621669
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  23621637 atactccctccgtcccaaattgtatgtcacttt 23621669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 23949820 - 23949788
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||| |||||||||||||||||||||||||||    
T  23949820 atacttcctccatcccaaattgtatgtcacttt 23949788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 29832825 - 29832793
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    |||||| ||||||||||||||||||||||||||    
T  29832825 atactctctccatcccaaattgtatgtcacttt 29832793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 31648616 - 31648584
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  31648616 atactccctccgtcccaaattgtatgtcacttt 31648584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 34016766 - 34016798
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  34016766 atactccctccgtcccaaattgtatgtcacttt 34016798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 41858712 - 41858744
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  41858712 atactccctccgtcccaaattgtatgtcacttt 41858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 48380572 - 48380604
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  48380572 atactccctccgtcccaaattgtatgtcacttt 48380604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 49236041 - 49236009
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  49236041 atactccctccgtcccaaattgtatgtcacttt 49236009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 51817226 - 51817194
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  51817226 atactccctccgtcccaaattgtatgtcacttt 51817194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 55968540 - 55968572
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  55968540 atactccctccgtcccaaattgtatgtcacttt 55968572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 55984396 - 55984364
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  55984396 atactccctccgtcccaaattgtatgtcacttt 55984364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 44710117 - 44710085
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||||||||||||||||||||||||    
T  44710117 atactccctccatcccaaattgtatgtcacttt 44710085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 475
Target Start/End: Original strand, 27244919 - 27244954
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttttg 475  Q
    |||||||||||| |||||||||||||||||||||||    
T  27244919 tatactccctccgtcccaaattgtatgtcacttttg 27244954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 325415 - 325382
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  325415 tatactccctccgtcccaaattgtatgtcacttt 325382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 3628668 - 3628635
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  3628668 tatactccctccgtcccaaattgtatgtcacttt 3628635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 36443511 - 36443544
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  36443511 tatactccctccgtcccaaattgtatgtcacttt 36443544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 19002904 - 19002936
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  19002904 atactccctccgtcccaaattgtatgtcacttt 19002936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 22060978 - 22061010
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  22060978 atactccctccgtcccaaattgtatgtcacttt 22061010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 31909860 - 31909828
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  31909860 atactccctccgtcccaaattgtatgtcacttt 31909828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 39407775 - 39407807
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  39407775 atactccctccgtcccaaattgtatgtcacttt 39407807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 39927773 - 39927741
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  39927773 atactccctccgtcccaaattgtatgtcacttt 39927741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 40833467 - 40833499
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  40833467 atactccctccgtcccaaattgtatgtcacttt 40833499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 472
Target Start/End: Original strand, 41095923 - 41095955
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcactt 472  Q
    |||||||||||| ||||||||||||||||||||    
T  41095923 tatactccctccgtcccaaattgtatgtcactt 41095955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 26834827 - 26834859
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||||||||||||||||||||||||    
T  26834827 atactccctccatcccaaattgtatgtcacttt 26834859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 42709675 - 42709707
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||||||||||||||||||||||||    
T  42709675 atactccctccatcccaaattgtatgtcacttt 42709707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 473
Target Start/End: Complemental strand, 22172710 - 22172679
Alignment:
Q  442 tactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||||||||||||||||||||||||    
T  22172710 tactccctccatcccaaattgtatgtcacttt 22172679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 3552843 - 3552810
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  3552843 tatactccctccgtcccaaattgtatgtcacttt 3552810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 6921013 - 6920980
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  6921013 tatactccctccgtcccaaattgtatgtcacttt 6920980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 16436053 - 16436086
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  16436053 tatactccctccgtcccaaattgtatgtcacttt 16436086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 24589496 - 24589529
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  24589496 tatactccctccgtcccaaattgtatgtcacttt 24589529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 32145351 - 32145384
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  32145351 tatactccctccgtcccaaattgtatgtcacttt 32145384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 38238864 - 38238897
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  38238864 tatactccctccgtcccaaattgtatgtcacttt 38238897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 46160336 - 46160369
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||||||| ||||||||||||||||||    
T  46160336 tatactccctccatctcaaattgtatgtcacttt 46160369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 49251848 - 49251815
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  49251848 tatactccctccgtcccaaattgtatgtcacttt 49251815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 50942617 - 50942650
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  50942617 tatactccctccgtcccaaattgtatgtcacttt 50942650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 52688133 - 52688166
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||||||||||||||||||||| ||||    
T  52688133 tatactccctccatcccaaattgtatgtcgcttt 52688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 16010915 - 16010947
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  16010915 atactccctccgtcccaaattgtatgtcacttt 16010947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 18127333 - 18127365
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  18127333 atactccctccgtcccaaattgtatgtcacttt 18127365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 23624838 - 23624870
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  23624838 atactccctccgtcccaaattgtatgtcacttt 23624870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 24583828 - 24583860
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  24583828 atactccctccgtcccaaattgtatgtcacttt 24583860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 41529108 - 41529140
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  41529108 atactccctccgtcccaaattgtatgtcacttt 41529140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 473
Target Start/End: Complemental strand, 45674355 - 45674324
Alignment:
Q  442 tactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||||||||||||||||||||||||    
T  45674355 tactccctccatcccaaattgtatgtcacttt 45674324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 8108433 - 8108466
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||||||||||| |||||||||||||    
T  8108433 tatactccctccatcccaaaatgtatgtcacttt 8108466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 19961109 - 19961076
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  19961109 tatactccctccgtcccaaattgtatgtcacttt 19961076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 25904192 - 25904159
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  25904192 tatactccctccgtcccaaattgtatgtcacttt 25904159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 29651991 - 29652024
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  29651991 tatactccctccgtcccaaattgtatgtcacttt 29652024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 34817188 - 34817155
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  34817188 tatactccctccgtcccaaattgtatgtcacttt 34817155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 43599568 - 43599601
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  43599568 tatactccctccgtcccaaattgtatgtcacttt 43599601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 52060555 - 52060522
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  52060555 tatactccctccgtcccaaattgtatgtcacttt 52060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 3671663 - 3671631
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  3671663 atactccctccgtcccaaattgtatgtcacttt 3671631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 7674189 - 7674157
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  7674189 atactccctccgtcccaaattgtatgtcacttt 7674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 21216949 - 21216917
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  21216949 atactccctccgtcccaaattgtatgtcacttt 21216917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 38783724 - 38783692
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  38783724 atactccctccgtcccaaattgtatgtcacttt 38783692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 43175733 - 43175765
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  43175733 atactccctccgtcccaaattgtatgtcacttt 43175765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 45824168 - 45824136
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  45824168 atactccctccgtcccaaattgtatgtcacttt 45824136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 468
Target Start/End: Complemental strand, 48962852 - 48962824
Alignment:
Q  440 tatactccctccatcccaaattgtatgtc 468  Q
    |||||||||||||||||||||||||||||    
T  48962852 tatactccctccatcccaaattgtatgtc 48962824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000004; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 439 - 473
Target Start/End: Original strand, 16421857 - 16421891
Alignment:
Q  439 ctatactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||||| |||||||||||||||||||||    
T  16421857 ctatactccctccgtcccaaattgtatgtcacttt 16421891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 16872644 - 16872611
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  16872644 tatactccctccgtcccaaattgtatgtcacttt 16872611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 19715225 - 19715258
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  19715225 tatactccctccgtcccaaattgtatgtcacttt 19715258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 29938288 - 29938321
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  29938288 tatactccctccgtcccaaattgtatgtcacttt 29938321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 37504988 - 37505021
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  37504988 tatactccctccgtcccaaattgtatgtcacttt 37505021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 473
Target Start/End: Original strand, 6796101 - 6796129
Alignment:
Q  445 tccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||||||||||||||||||||    
T  6796101 tccctccatcccaaattgtatgtcacttt 6796129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 8378372 - 8378340
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  8378372 atactccctccgtcccaaattgtatgtcacttt 8378340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 22578204 - 22578236
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  22578204 atactccctccgtcccaaattgtatgtcacttt 22578236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 23597260 - 23597292
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  23597260 atactccctccgtcccaaattgtatgtcacttt 23597292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 23606182 - 23606214
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  23606182 atactccctccgtcccaaattgtatgtcacttt 23606214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 27919708 - 27919676
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  27919708 atactccctccgtcccaaattgtatgtcacttt 27919676  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 31873702 - 31873670
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  31873702 atactccctccgtcccaaattgtatgtcacttt 31873670  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 38896741 - 38896709
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  38896741 atactccctccgtcccaaattgtatgtcacttt 38896709  T

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Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 39645991 - 39645959
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  39645991 atactccctccgtcccaaattgtatgtcacttt 39645959  T

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Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 40488139 - 40488171
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  40488139 atactccctccttcccaaattgtatgtcacttt 40488171  T

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Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 42373289 - 42373257
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  42373289 atactccctccgtcccaaattgtatgtcacttt 42373257  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 9818082 - 9818115
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  9818082 tatactccctccgtcccaaattgtatgtcacttt 9818115  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 10720007 - 10720040
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  10720007 tatactccctccgtcccaaattgtatgtcacttt 10720040  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 24924455 - 24924422
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  24924455 tatactccctccgtcccaaattgtatgtcacttt 24924422  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 45780933 - 45780900
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  45780933 tatactccctccgtcccaaattgtatgtcacttt 45780900  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 45823242 - 45823209
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  45823242 tatactccctccgtcccaaattgtatgtcacttt 45823209  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 1643788 - 1643756
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  1643788 atactccctccgtcccaaattgtatgtcacttt 1643756  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 10453190 - 10453158
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  10453190 atactccctccgtcccaaattgtatgtcacttt 10453158  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 22918172 - 22918204
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  22918172 atactccctccgtcccaaattgtatgtcacttt 22918204  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 23059069 - 23059101
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  23059069 atactccctccgtcccaaattgtatgtcacttt 23059101  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 46373285 - 46373253
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  46373285 atactccctccgtcccaaattgtatgtcacttt 46373253  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 47834434 - 47834402
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||||| ||||||||||||||||||    
T  47834434 atactccctccatctcaaattgtatgtcacttt 47834402  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Complemental strand, 10364755 - 10364722
Alignment:
Q  440 tatactccctccatcccaaattgtatgtcacttt 473  Q
    |||||||||||| |||||||||||||||||||||    
T  10364755 tatactccctccgtcccaaattgtatgtcacttt 10364722  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 2603678 - 2603646
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  2603678 atactccctccgtcccaaattgtatgtcacttt 2603646  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 3787091 - 3787123
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  3787091 atactccctccgtcccaaattgtatgtcacttt 3787123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 4657822 - 4657854
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||||||||||||||||| |||||||    
T  4657822 atactccctccatcccaaattgtatatcacttt 4657854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 6835711 - 6835743
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  6835711 atactccctccgtcccaaattgtatgtcacttt 6835743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 8201459 - 8201491
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  8201459 atactccctccgtcccaaattgtatgtcacttt 8201491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 15497840 - 15497872
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  15497840 atactccctccgtcccaaattgtatgtcacttt 15497872  T

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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 5118 - 5150
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||||||||||||||||| |||||||    
T  5118 atactccctccatcccaaattgtatatcacttt 5150  T

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Target: scaffold0264 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 18962 - 18930
Alignment:
Q  441 atactccctccatcccaaattgtatgtcacttt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  18962 atactccctccgtcccaaattgtatgtcacttt 18930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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