View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17583_high_1 (Length: 243)

Name: NF17583_high_1
Description: NF17583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17583_high_1
NF17583_high_1
[»] chr4 (114 HSPs)
chr4 (1-243)||(5441403-5441645)
chr4 (1-243)||(27768055-27768297)
chr4 (1-241)||(54341143-54341383)
chr4 (1-243)||(37828367-37828609)
chr4 (1-240)||(51320920-51321159)
chr4 (1-228)||(54853448-54853675)
chr4 (1-232)||(37915826-37916057)
chr4 (3-242)||(32322092-32322331)
chr4 (1-242)||(23987213-23987444)
chr4 (1-241)||(30967276-30967506)
chr4 (1-242)||(41725124-41725359)
chr4 (62-243)||(48261187-48261368)
chr4 (1-242)||(49501485-49501718)
chr4 (1-242)||(49507550-49507783)
chr4 (1-213)||(1112892-1113104)
chr4 (1-213)||(25331130-25331342)
chr4 (1-242)||(49834799-49835020)
chr4 (1-210)||(50018250-50018449)
chr4 (1-210)||(55302842-55303051)
chr4 (1-228)||(32683988-32684194)
chr4 (1-242)||(5799976-5800208)
chr4 (1-213)||(41881077-41881290)
chr4 (1-242)||(44770821-44771061)
chr4 (1-213)||(12112944-12113156)
chr4 (1-201)||(22202014-22202214)
chr4 (1-213)||(34228578-34228790)
chr4 (3-213)||(30009672-30009882)
chr4 (7-242)||(12913229-12913455)
chr4 (26-242)||(28483923-28484127)
chr4 (1-213)||(32950831-32951043)
chr4 (10-144)||(29649731-29649865)
chr4 (1-213)||(7007373-7007585)
chr4 (1-222)||(36479228-36479438)
chr4 (1-213)||(39479350-39479564)
chr4 (1-187)||(19740929-19741115)
chr4 (26-213)||(42786708-42786895)
chr4 (1-220)||(9163075-9163286)
chr4 (1-201)||(1044808-1045006)
chr4 (1-178)||(28541697-28541874)
chr4 (1-201)||(3436592-3436792)
chr4 (1-201)||(39307260-39307460)
chr4 (1-179)||(25446050-25446227)
chr4 (1-213)||(37046445-37046659)
chr4 (1-213)||(46635643-46635849)
chr4 (1-171)||(28370923-28371093)
chr4 (45-213)||(41320853-41321021)
chr4 (116-222)||(8711980-8712086)
chr4 (1-213)||(24130976-24131179)
chr4 (3-213)||(31314737-31314933)
chr4 (1-218)||(40537150-40537352)
chr4 (1-150)||(25504697-25504846)
chr4 (1-188)||(53275838-53276025)
chr4 (5-201)||(41581796-41581991)
chr4 (116-213)||(24736449-24736546)
chr4 (1-166)||(23464954-23465119)
chr4 (79-213)||(56445350-56445474)
chr4 (68-178)||(7249795-7249905)
chr4 (1-239)||(20021343-20021570)
chr4 (78-213)||(27454073-27454208)
chr4 (135-242)||(36727916-36728022)
chr4 (1-88)||(37915742-37915829)
chr4 (1-88)||(37915784-37915871)
chr4 (1-88)||(40537307-40537394)
chr4 (1-88)||(41881245-41881332)
chr4 (1-88)||(5441361-5441448)
chr4 (25-88)||(9163057-9163120)
chr4 (135-218)||(11090437-11090520)
chr4 (1-88)||(22201972-22202059)
chr4 (1-88)||(24131134-24131221)
chr4 (1-88)||(25331088-25331175)
chr4 (1-88)||(30009839-30009926)
chr4 (1-88)||(32950998-32951085)
chr4 (1-87)||(19741071-19741157)
chr4 (1-61)||(11090348-11090408)
chr4 (24-88)||(50018189-50018253)
chr4 (1-88)||(25504801-25504888)
chr4 (1-88)||(27768013-27768100)
chr4 (1-88)||(28541655-28541742)
chr4 (1-88)||(30967461-30967548)
chr4 (1-88)||(37046614-37046701)
chr4 (1-88)||(39479519-39479606)
chr4 (1-88)||(54341101-54341188)
chr4 (26-88)||(5441344-5441406)
chr4 (3-49)||(29855682-29855728)
chr4 (26-88)||(30967503-30967565)
chr4 (26-88)||(37915725-37915787)
chr4 (1-88)||(12112901-12112989)
chr4 (21-57)||(40143822-40143858)
chr4 (21-57)||(54509760-54509796)
chr4 (1-88)||(1112850-1112937)
chr4 (1-88)||(31314890-31314977)
chr4 (1-88)||(34228745-34228831)
chr4 (1-88)||(37828564-37828651)
chr4 (1-88)||(46635804-46635891)
chr4 (1-88)||(51320878-51320965)
chr4 (1-88)||(54853630-54853717)
chr4 (1-88)||(55302800-55302887)
chr4 (1-88)||(7007330-7007418)
chr4 (20-85)||(12913157-12913223)
chr4 (26-88)||(27767996-27768058)
chr4 (12-54)||(41320788-41320830)
chr4 (26-88)||(54341084-54341146)
chr4 (26-88)||(54853672-54853734)
chr4 (3-52)||(20021303-20021352)
chr4 (24-57)||(28100584-28100617)
chr4 (1-86)||(50018208-50018293)
chr4 (1-88)||(1044767-1044851)
chr4 (1-88)||(12913180-12913268)
chr4 (21-57)||(26336123-26336159)
chr4 (24-88)||(37046656-37046720)
chr4 (24-88)||(39479561-39479625)
chr4 (24-88)||(40537349-40537413)
chr4 (13-57)||(41762017-41762061)
chr4 (21-57)||(47685190-47685226)
[»] chr7 (108 HSPs)
chr7 (1-241)||(23101292-23101532)
chr7 (1-243)||(28342341-28342583)
chr7 (1-243)||(29614728-29614970)
chr7 (1-234)||(39784093-39784326)
chr7 (1-242)||(18838383-18838624)
chr7 (1-242)||(3022920-3023161)
chr7 (1-242)||(9882202-9882442)
chr7 (1-242)||(28034770-28035011)
chr7 (1-242)||(8675327-8675567)
chr7 (1-242)||(33382631-33382872)
chr7 (1-243)||(509650-509882)
chr7 (1-232)||(7993136-7993367)
chr7 (1-242)||(12740367-12740607)
chr7 (1-242)||(44121875-44122106)
chr7 (1-242)||(46405406-46405637)
chr7 (1-241)||(40460683-40460913)
chr7 (1-242)||(37327921-37328152)
chr7 (3-239)||(44256734-44256970)
chr7 (1-242)||(39028091-39028322)
chr7 (1-242)||(41827308-41827539)
chr7 (1-242)||(32883776-32884002)
chr7 (1-242)||(29585509-29585739)
chr7 (1-242)||(33892212-33892456)
chr7 (1-213)||(973185-973397)
chr7 (3-222)||(10068462-10068682)
chr7 (1-213)||(47914267-47914479)
chr7 (1-222)||(12963695-12963911)
chr7 (1-213)||(7719254-7719466)
chr7 (1-213)||(18914729-18914941)
chr7 (1-213)||(34695274-34695486)
chr7 (1-213)||(40996643-40996855)
chr7 (1-201)||(43581096-43581296)
chr7 (1-213)||(47879169-47879381)
chr7 (1-213)||(30440797-30441009)
chr7 (1-213)||(12893409-12893621)
chr7 (1-213)||(44343390-44343602)
chr7 (20-213)||(7718356-7718549)
chr7 (93-242)||(37972832-37972981)
chr7 (1-201)||(20275269-20275469)
chr7 (1-222)||(3797052-3797263)
chr7 (1-212)||(19251533-19251734)
chr7 (1-213)||(34009013-34009226)
chr7 (1-213)||(17001037-17001229)
chr7 (14-213)||(32142911-32143112)
chr7 (55-225)||(43187339-43187509)
chr7 (1-213)||(39219371-39219583)
chr7 (1-213)||(7113457-7113665)
chr7 (3-167)||(10676460-10676624)
chr7 (1-204)||(47066697-47066881)
chr7 (1-213)||(9179874-9180076)
chr7 (1-103)||(29893075-29893177)
chr7 (1-177)||(25805686-25805862)
chr7 (59-178)||(43679473-43679592)
chr7 (1-150)||(1470291-1470438)
chr7 (1-131)||(44623352-44623482)
chr7 (1-188)||(727513-727691)
chr7 (82-214)||(19810874-19810996)
chr7 (1-140)||(31638876-31639015)
chr7 (1-54)||(48117746-48117799)
chr7 (77-133)||(447853-447909)
chr7 (1-88)||(7113415-7113502)
chr7 (1-88)||(19251491-19251578)
chr7 (1-88)||(29614925-29615012)
chr7 (195-242)||(29893173-29893220)
chr7 (1-88)||(34008971-34009058)
chr7 (1-88)||(39784051-39784138)
chr7 (1-88)||(47879127-47879214)
chr7 (1-88)||(47914225-47914312)
chr7 (1-85)||(12893367-12893451)
chr7 (1-88)||(973143-973230)
chr7 (25-88)||(3022902-3022965)
chr7 (1-88)||(9882397-9882484)
chr7 (1-88)||(12963653-12963740)
chr7 (1-88)||(17001184-17001271)
chr7 (1-88)||(18914896-18914983)
chr7 (1-88)||(23101250-23101337)
chr7 (1-88)||(28342299-28342386)
chr7 (1-88)||(30440755-30440842)
chr7 (1-88)||(34695190-34695277)
chr7 (1-88)||(37327879-37327966)
chr7 (1-88)||(40996810-40996897)
chr7 (1-88)||(43581251-43581338)
chr7 (1-88)||(44343557-44343644)
chr7 (14-72)||(10616955-10617013)
chr7 (26-88)||(29614967-29615029)
chr7 (23-88)||(28034966-28035031)
chr7 (21-57)||(40097140-40097176)
chr7 (1-88)||(727471-727558)
chr7 (1-88)||(3797218-3797305)
chr7 (116-222)||(10617027-10617134)
chr7 (1-88)||(33382589-33382676)
chr7 (1-88)||(34695232-34695319)
chr7 (1-88)||(48117754-48117841)
chr7 (26-88)||(509633-509695)
chr7 (1-54)||(8078396-8078450)
chr7 (26-88)||(17001226-17001288)
chr7 (26-88)||(23101233-23101295)
chr7 (26-88)||(28342282-28342344)
chr7 (26-88)||(34695173-34695235)
chr7 (26-88)||(37327862-37327924)
chr7 (26-88)||(39784034-39784096)
chr7 (1-47)||(43187545-43187591)
chr7 (26-88)||(48117796-48117858)
chr7 (7-88)||(7719421-7719502)
chr7 (1-54)||(10068418-10068471)
chr7 (1-85)||(32143083-32143167)
chr7 (21-57)||(39301247-39301283)
chr7 (25-57)||(41827290-41827322)
[»] chr8 (76 HSPs)
chr8 (1-243)||(14782099-14782341)
chr8 (1-243)||(44725774-44726016)
chr8 (1-242)||(39467433-39467674)
chr8 (1-232)||(19717856-19718087)
chr8 (1-228)||(9288436-9288663)
chr8 (1-228)||(18958706-18958933)
chr8 (1-242)||(26856066-26856308)
chr8 (1-243)||(18305935-18306167)
chr8 (1-226)||(10295360-10295587)
chr8 (1-230)||(32497525-32497744)
chr8 (1-242)||(7466335-7466566)
chr8 (1-242)||(43166655-43166896)
chr8 (1-228)||(4403107-4403334)
chr8 (1-226)||(16362196-16362411)
chr8 (1-228)||(42305774-42305991)
chr8 (1-213)||(26374424-26374636)
chr8 (1-226)||(31623695-31623900)
chr8 (1-213)||(2704813-2705025)
chr8 (1-213)||(24501807-24502019)
chr8 (1-213)||(42938111-42938323)
chr8 (26-228)||(37857144-37857336)
chr8 (1-213)||(5576614-5576827)
chr8 (1-198)||(10392246-10392443)
chr8 (1-213)||(42937353-42937563)
chr8 (1-213)||(7506893-7507105)
chr8 (1-213)||(42735271-42735483)
chr8 (1-131)||(4031334-4031464)
chr8 (1-213)||(23115163-23115374)
chr8 (1-225)||(39189798-39190019)
chr8 (1-213)||(41479097-41479299)
chr8 (1-213)||(43959658-43959859)
chr8 (38-213)||(4950010-4950184)
chr8 (1-131)||(32711358-32711488)
chr8 (1-130)||(41069944-41070074)
chr8 (144-191)||(4031294-4031341)
chr8 (1-88)||(18958888-18958975)
chr8 (59-188)||(13478269-13478397)
chr8 (1-88)||(5576782-5576869)
chr8 (79-150)||(8410455-8410526)
chr8 (1-88)||(14782296-14782383)
chr8 (1-88)||(19718042-19718129)
chr8 (1-88)||(32711443-32711530)
chr8 (1-88)||(42735438-42735525)
chr8 (1-88)||(42938278-42938365)
chr8 (1-88)||(44725971-44726058)
chr8 (1-90)||(9770934-9771023)
chr8 (20-88)||(42937330-42937398)
chr8 (1-88)||(2704980-2705067)
chr8 (1-88)||(7466293-7466380)
chr8 (1-88)||(18306122-18306209)
chr8 (1-88)||(23115329-23115416)
chr8 (1-88)||(41479055-41479142)
chr8 (1-88)||(42305946-42306033)
chr8 (26-88)||(14782338-14782400)
chr8 (26-88)||(24501974-24502036)
chr8 (26-88)||(32497424-32497486)
chr8 (26-88)||(43166851-43166913)
chr8 (26-88)||(44726013-44726075)
chr8 (23-88)||(39467629-39467694)
chr8 (4-88)||(4031419-4031503)
chr8 (5-88)||(9288618-9288701)
chr8 (1-88)||(16362154-16362241)
chr8 (1-88)||(31623653-31623740)
chr8 (26-88)||(4031461-4031523)
chr8 (26-88)||(7466276-7466338)
chr8 (26-88)||(18306164-18306226)
chr8 (26-88)||(18958930-18958992)
chr8 (26-88)||(19718084-19718146)
chr8 (26-88)||(39467671-39467732)
chr8 (21-54)||(4302813-4302846)
chr8 (3-72)||(13478408-13478475)
chr8 (82-130)||(9770497-9770545)
chr8 (1-88)||(26374591-26374676)
chr8 (25-57)||(32497465-32497497)
chr8 (21-57)||(37567365-37567401)
chr8 (40-88)||(41069941-41069989)
[»] chr3 (113 HSPs)
chr3 (1-243)||(36674095-36674337)
chr3 (1-243)||(34483995-34484237)
chr3 (1-242)||(17946287-17946528)
chr3 (1-242)||(44906479-44906720)
chr3 (4-241)||(32580179-32580415)
chr3 (1-226)||(11431525-11431750)
chr3 (1-242)||(26107260-26107501)
chr3 (1-243)||(54628842-54629085)
chr3 (1-242)||(48379156-48379397)
chr3 (1-238)||(52810377-52810614)
chr3 (1-242)||(52617937-52618172)
chr3 (1-243)||(31646251-31646491)
chr3 (1-238)||(18749611-18749848)
chr3 (5-232)||(40897147-40897375)
chr3 (1-242)||(51737693-51737934)
chr3 (1-230)||(10728629-10728848)
chr3 (1-226)||(37454860-37455075)
chr3 (1-230)||(50762038-50762257)
chr3 (1-215)||(50903233-50903450)
chr3 (1-232)||(39038039-39038260)
chr3 (3-197)||(20832993-20833187)
chr3 (1-243)||(10660534-10660752)
chr3 (1-238)||(23753377-23753593)
chr3 (1-222)||(6035039-6035260)
chr3 (1-213)||(19253826-19254038)
chr3 (1-213)||(20498208-20498420)
chr3 (1-213)||(996081-996293)
chr3 (1-213)||(10139141-10139353)
chr3 (1-213)||(3999640-3999852)
chr3 (1-213)||(6589563-6589775)
chr3 (1-213)||(37820472-37820684)
chr3 (26-213)||(3206200-3206387)
chr3 (1-210)||(33807796-33808006)
chr3 (1-213)||(25418365-25418577)
chr3 (1-201)||(33996548-33996748)
chr3 (1-213)||(40246843-40247055)
chr3 (1-213)||(44762032-44762244)
chr3 (1-198)||(35337734-35337930)
chr3 (1-213)||(29448853-29449065)
chr3 (1-213)||(53929123-53929335)
chr3 (1-213)||(54625591-54625803)
chr3 (1-225)||(44276388-44276598)
chr3 (44-242)||(39842460-39842648)
chr3 (7-213)||(5825065-5825273)
chr3 (1-201)||(52114527-52114728)
chr3 (1-200)||(29030005-29030203)
chr3 (7-238)||(15492836-15493061)
chr3 (1-193)||(51699495-51699686)
chr3 (26-133)||(539479-539586)
chr3 (1-103)||(6975748-6975847)
chr3 (1-150)||(1440010-1440160)
chr3 (144-221)||(45862983-45863060)
chr3 (1-102)||(12103628-12103729)
chr3 (1-173)||(22057760-22057933)
chr3 (15-164)||(55235198-55235347)
chr3 (25-213)||(27899367-27899545)
chr3 (1-88)||(18749569-18749656)
chr3 (125-213)||(6131228-6131316)
chr3 (108-213)||(1439889-1439994)
chr3 (1-88)||(10139308-10139395)
chr3 (1-88)||(10660492-10660579)
chr3 (1-88)||(19253784-19253871)
chr3 (1-88)||(36674292-36674379)
chr3 (2-88)||(3999807-3999893)
chr3 (1-43)||(27240408-27240450)
chr3 (1-54)||(6131325-6131378)
chr3 (41-102)||(23535917-23535977)
chr3 (1-88)||(996248-996334)
chr3 (1-88)||(11431483-11431570)
chr3 (1-88)||(18749527-18749614)
chr3 (1-88)||(20498166-20498253)
chr3 (1-88)||(23753548-23753635)
chr3 (1-88)||(37820639-37820726)
chr3 (1-88)||(44276304-44276391)
chr3 (1-88)||(44276346-44276433)
chr3 (1-88)||(44762199-44762286)
chr3 (1-88)||(44906675-44906762)
chr3 (1-88)||(54628800-54628887)
chr3 (26-88)||(10660475-10660537)
chr3 (26-88)||(11431466-11431528)
chr3 (26-88)||(23753590-23753652)
chr3 (26-88)||(36674334-36674396)
chr3 (1-46)||(27899385-27899430)
chr3 (1-88)||(25418323-25418410)
chr3 (21-57)||(27593198-27593234)
chr3 (158-210)||(33807678-33807730)
chr3 (20-88)||(34484192-34484260)
chr3 (21-57)||(36786017-36786053)
chr3 (25-88)||(51737888-51737952)
chr3 (1-52)||(3206394-3206445)
chr3 (1-88)||(6131333-6131420)
chr3 (1-88)||(6589521-6589608)
chr3 (7-54)||(6975712-6975759)
chr3 (1-88)||(29029963-29030050)
chr3 (1-88)||(35337692-35337779)
chr3 (1-88)||(40246801-40246888)
chr3 (1-88)||(50762212-50762299)
chr3 (1-88)||(50903405-50903492)
chr3 (1-88)||(51699641-51699728)
chr3 (26-88)||(3206400-3206462)
chr3 (26-88)||(10728803-10728865)
chr3 (26-88)||(18749510-18749572)
chr3 (26-88)||(27240447-27240509)
chr3 (26-88)||(44906717-44906779)
chr3 (26-88)||(50903447-50903509)
chr3 (24-57)||(10216163-10216196)
chr3 (24-57)||(10225671-10225704)
chr3 (145-186)||(12103733-12103774)
chr3 (1-54)||(27240439-27240492)
chr3 (78-131)||(52080003-52080056)
chr3 (1-88)||(1440114-1440201)
chr3 (20-88)||(33807961-33808029)
chr3 (21-57)||(39338299-39338335)
[»] chr1 (87 HSPs)
chr1 (1-243)||(6312567-6312809)
chr1 (1-243)||(25612150-25612392)
chr1 (1-243)||(51701573-51701815)
chr1 (1-238)||(29396358-29396595)
chr1 (1-242)||(9322466-9322707)
chr1 (1-238)||(15835023-15835260)
chr1 (1-228)||(48177442-48177669)
chr1 (1-242)||(28387359-28387600)
chr1 (1-242)||(46328035-46328276)
chr1 (1-242)||(38536065-38536296)
chr1 (1-242)||(38558283-38558514)
chr1 (1-228)||(18798484-18798691)
chr1 (1-225)||(29219281-29219493)
chr1 (1-222)||(9577418-9577639)
chr1 (1-197)||(5495117-5495303)
chr1 (1-210)||(21222140-21222349)
chr1 (1-223)||(48668770-48668979)
chr1 (1-213)||(19451803-19452015)
chr1 (1-201)||(35279665-35279865)
chr1 (1-242)||(45272580-45272809)
chr1 (1-211)||(35679125-35679335)
chr1 (1-213)||(50192545-50192758)
chr1 (1-213)||(28824368-28824579)
chr1 (1-213)||(47780704-47780916)
chr1 (1-213)||(49198264-49198475)
chr1 (1-213)||(6304247-6304460)
chr1 (1-213)||(37014635-37014847)
chr1 (1-213)||(45760004-45760217)
chr1 (1-130)||(49230879-49231008)
chr1 (1-201)||(49418077-49418277)
chr1 (1-188)||(45535937-45536124)
chr1 (1-198)||(32588963-32589160)
chr1 (1-213)||(47654346-47654559)
chr1 (1-213)||(29556097-29556310)
chr1 (1-179)||(48524312-48524490)
chr1 (1-173)||(730141-730314)
chr1 (1-93)||(8141243-8141335)
chr1 (77-201)||(31572204-31572328)
chr1 (1-140)||(47784380-47784518)
chr1 (1-201)||(33025505-33025696)
chr1 (1-95)||(22183363-22183457)
chr1 (40-140)||(31622527-31622626)
chr1 (50-165)||(51085837-51085952)
chr1 (1-88)||(28824534-28824621)
chr1 (105-200)||(38320003-38320098)
chr1 (1-88)||(730099-730186)
chr1 (1-72)||(953812-953883)
chr1 (1-88)||(15835215-15835302)
chr1 (1-88)||(25612108-25612195)
chr1 (1-88)||(49198430-49198516)
chr1 (1-86)||(953770-953855)
chr1 (1-85)||(19451973-19452057)
chr1 (1-85)||(48524270-48524354)
chr1 (1-88)||(18798442-18798529)
chr1 (1-88)||(19452012-19452099)
chr1 (1-88)||(22183321-22183408)
chr1 (1-88)||(35279623-35279710)
chr1 (5-88)||(37014802-37014885)
chr1 (1-88)||(49230837-49230924)
chr1 (1-88)||(51701531-51701618)
chr1 (26-88)||(15835257-15835319)
chr1 (20-57)||(10896845-10896882)
chr1 (21-57)||(1928406-1928442)
chr1 (21-57)||(36402293-36402329)
chr1 (81-140)||(955823-955882)
chr1 (1-88)||(6312525-6312612)
chr1 (1-88)||(8141290-8141377)
chr1 (1-88)||(21222099-21222185)
chr1 (1-88)||(28387555-28387642)
chr1 (1-88)||(29396550-29396637)
chr1 (1-88)||(35679290-35679377)
chr1 (25-88)||(46328017-46328080)
chr1 (26-88)||(6312508-6312570)
chr1 (1-75)||(14494160-14494234)
chr1 (26-88)||(19452054-19452116)
chr1 (26-88)||(25612091-25612153)
chr1 (26-88)||(28824576-28824638)
chr1 (26-88)||(29219222-29219284)
chr1 (1-88)||(47780661-47780749)
chr1 (1-54)||(29219239-29219292)
chr1 (21-57)||(29208801-29208837)
chr1 (21-57)||(33243312-33243348)
chr1 (21-57)||(33263485-33263521)
chr1 (24-88)||(38536251-38536315)
chr1 (24-88)||(38558469-38558533)
chr1 (24-56)||(42657763-42657795)
chr1 (1-88)||(45760171-45760259)
[»] chr6 (32 HSPs)
chr6 (1-243)||(31895695-31895937)
chr6 (1-228)||(14262412-14262639)
chr6 (1-232)||(34759025-34759257)
chr6 (1-243)||(34773408-34773639)
chr6 (25-242)||(7497099-7497315)
chr6 (1-242)||(30385034-30385263)
chr6 (1-213)||(6197472-6197684)
chr6 (1-201)||(2300744-2300944)
chr6 (77-240)||(31067568-31067721)
chr6 (4-201)||(7051847-7052044)
chr6 (1-213)||(1391623-1391835)
chr6 (93-243)||(4200401-4200541)
chr6 (1-193)||(28002664-28002856)
chr6 (1-213)||(29076597-29076810)
chr6 (1-213)||(29111570-29111784)
chr6 (1-131)||(3848211-3848339)
chr6 (1-102)||(656965-657065)
chr6 (1-88)||(2300899-2300986)
chr6 (1-88)||(6197639-6197726)
chr6 (1-88)||(34773366-34773453)
chr6 (1-88)||(28002622-28002709)
chr6 (1-88)||(29076555-29076642)
chr6 (1-88)||(29111528-29111615)
chr6 (1-88)||(31895653-31895740)
chr6 (26-88)||(31895636-31895698)
chr6 (26-88)||(34773349-34773411)
chr6 (169-213)||(2238678-2238722)
chr6 (21-57)||(10644016-10644052)
chr6 (21-57)||(30877898-30877934)
chr6 (1-88)||(1391581-1391668)
chr6 (1-84)||(7051802-7051885)
chr6 (25-88)||(14262594-14262657)
[»] chr5 (45 HSPs)
chr5 (1-243)||(14000069-14000311)
chr5 (1-242)||(1152068-1152309)
chr5 (1-242)||(13925931-13926172)
chr5 (1-242)||(7947538-7947779)
chr5 (1-236)||(4240433-4240658)
chr5 (28-238)||(39852372-39852582)
chr5 (1-218)||(4550246-4550463)
chr5 (1-232)||(40013687-40013908)
chr5 (1-242)||(1461113-1461344)
chr5 (1-242)||(5949109-5949339)
chr5 (1-213)||(22746297-22746501)
chr5 (1-213)||(21147067-21147279)
chr5 (1-201)||(5272925-5273125)
chr5 (1-231)||(37013914-37014124)
chr5 (14-213)||(33656035-33656234)
chr5 (1-201)||(139273-139473)
chr5 (1-201)||(7016745-7016945)
chr5 (1-213)||(27458944-27459155)
chr5 (26-188)||(849172-849334)
chr5 (1-210)||(32157891-32158104)
chr5 (1-155)||(14465279-14465433)
chr5 (1-174)||(6460792-6460965)
chr5 (1-213)||(9689660-9689869)
chr5 (1-213)||(9220711-9220913)
chr5 (1-88)||(5273080-5273167)
chr5 (1-88)||(21147025-21147112)
chr5 (1-88)||(40013863-40013950)
chr5 (1-88)||(33656202-33656291)
chr5 (1-88)||(139231-139318)
chr5 (1-88)||(5273122-5273209)
chr5 (1-88)||(14000266-14000353)
chr5 (1-88)||(37013872-37013959)
chr5 (1-88)||(32158059-32158147)
chr5 (25-88)||(1152264-1152327)
chr5 (1-88)||(4240613-4240700)
chr5 (25-88)||(5949091-5949154)
chr5 (1-88)||(27459110-27459197)
chr5 (26-88)||(4550460-4550522)
chr5 (26-88)||(14000308-14000370)
chr5 (26-88)||(37013855-37013917)
chr5 (26-88)||(40013905-40013967)
chr5 (1-54)||(4550452-4550505)
chr5 (3-88)||(13925891-13925976)
chr5 (24-57)||(26806578-26806611)
chr5 (21-57)||(17518474-17518510)
[»] scaffold0543 (3 HSPs)
scaffold0543 (1-238)||(10560-10797)
scaffold0543 (1-88)||(10518-10605)
scaffold0543 (26-88)||(10501-10563)
[»] chr2 (69 HSPs)
chr2 (1-234)||(18177268-18177501)
chr2 (1-243)||(26788785-26789026)
chr2 (1-242)||(10657407-10657648)
chr2 (1-242)||(28844556-28844797)
chr2 (1-242)||(33135624-33135864)
chr2 (1-242)||(25288160-25288401)
chr2 (1-228)||(28740275-28740492)
chr2 (1-232)||(3463672-3463894)
chr2 (1-241)||(13833401-13833631)
chr2 (1-181)||(7026605-7026775)
chr2 (1-213)||(16269692-16269904)
chr2 (1-213)||(24776356-24776568)
chr2 (1-213)||(31170621-31170833)
chr2 (3-242)||(6224535-6224755)
chr2 (1-242)||(215206-215434)
chr2 (1-213)||(12407381-12407593)
chr2 (1-213)||(14198574-14198786)
chr2 (1-213)||(20605237-20605449)
chr2 (1-213)||(22551760-22551972)
chr2 (1-239)||(10125270-10125501)
chr2 (1-242)||(378938-379169)
chr2 (1-213)||(35317063-35317275)
chr2 (90-242)||(43078653-43078805)
chr2 (1-213)||(43847647-43847859)
chr2 (1-211)||(305464-305674)
chr2 (1-213)||(5093044-5093256)
chr2 (1-201)||(32125251-32125454)
chr2 (1-131)||(3574848-3574978)
chr2 (1-213)||(9120127-9120339)
chr2 (1-188)||(1789443-1789630)
chr2 (1-164)||(44765776-44765939)
chr2 (164-242)||(7027051-7027129)
chr2 (3-131)||(26601279-26601407)
chr2 (144-222)||(3574971-3575049)
chr2 (1-88)||(20605153-20605240)
chr2 (1-88)||(24776314-24776401)
chr2 (8-129)||(21370631-21370752)
chr2 (10-98)||(19145036-19145123)
chr2 (1-88)||(5093211-5093298)
chr2 (1-88)||(7026563-7026650)
chr2 (1-88)||(12407339-12407426)
chr2 (1-88)||(16269650-16269737)
chr2 (1-88)||(20605111-20605198)
chr2 (1-88)||(20605195-20605282)
chr2 (1-88)||(26788743-26788830)
chr2 (1-88)||(31170788-31170875)
chr2 (1-75)||(13833599-13833673)
chr2 (25-88)||(7026545-7026608)
chr2 (1-88)||(14198741-14198827)
chr2 (1-88)||(28844514-28844601)
chr2 (1-88)||(32125209-32125296)
chr2 (1-88)||(33135582-33135669)
chr2 (1-88)||(44765734-44765821)
chr2 (1-75)||(10125469-10125543)
chr2 (26-88)||(26788726-26788788)
chr2 (3-143)||(8172139-8172279)
chr2 (21-57)||(11534881-11534917)
chr2 (20-88)||(22551927-22551995)
chr2 (21-57)||(34028935-34028971)
chr2 (20-88)||(43847624-43847692)
chr2 (1-88)||(215389-215476)
chr2 (25-88)||(28740447-28740510)
chr2 (26-88)||(215431-215493)
chr2 (26-88)||(378921-378983)
chr2 (26-88)||(24776297-24776359)
chr2 (26-88)||(28844497-28844559)
chr2 (1-88)||(305629-305717)
chr2 (21-57)||(20157759-20157795)
chr2 (21-57)||(24193595-24193631)
[»] scaffold0110 (2 HSPs)
scaffold0110 (1-242)||(39583-39824)
scaffold0110 (26-88)||(39821-39883)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-243)||(13882-14114)
[»] scaffold0152 (2 HSPs)
scaffold0152 (1-243)||(21213-21445)
scaffold0152 (135-243)||(28475-28584)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-242)||(58042-58283)
[»] scaffold1504 (2 HSPs)
scaffold1504 (1-242)||(863-1101)
scaffold1504 (1-88)||(821-908)
[»] scaffold0054 (2 HSPs)
scaffold0054 (26-242)||(36876-37089)
scaffold0054 (1-46)||(37027-37072)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-201)||(100211-100411)
scaffold0037 (20-88)||(100188-100256)
[»] scaffold0400 (2 HSPs)
scaffold0400 (1-213)||(15028-15240)
scaffold0400 (1-88)||(15195-15282)
[»] scaffold0365 (2 HSPs)
scaffold0365 (1-213)||(15671-15883)
scaffold0365 (1-88)||(15838-15925)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-213)||(102093-102307)
[»] scaffold0922 (3 HSPs)
scaffold0922 (1-138)||(4200-4337)
scaffold0922 (20-88)||(4135-4203)
scaffold0922 (1-88)||(4158-4245)
[»] scaffold0151 (1 HSPs)
scaffold0151 (26-213)||(38600-38786)
[»] scaffold0839 (1 HSPs)
scaffold0839 (105-239)||(3661-3795)
[»] scaffold0113 (2 HSPs)
scaffold0113 (1-213)||(38890-39102)
scaffold0113 (26-88)||(39057-39119)
[»] scaffold0347 (1 HSPs)
scaffold0347 (135-232)||(14894-14991)
[»] scaffold0276 (3 HSPs)
scaffold0276 (1-218)||(529-746)
scaffold0276 (1-88)||(701-788)
scaffold0276 (26-88)||(743-805)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-74)||(233737-233810)
scaffold0010 (1-74)||(234585-234658)
scaffold0010 (1-74)||(222569-222642)
[»] scaffold0007 (1 HSPs)
scaffold0007 (68-156)||(199892-199980)


Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 114)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 5441403 - 5441645
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5441403 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 5441502  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441503 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 5441602  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5441603 tgagattgtttttattttaaaagttactatctttttcttctca 5441645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 27768055 - 27768297
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  27768055 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 27768154  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768155 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 27768254  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27768255 tgagattgtttttattttaaaagttactatctttttcttctca 27768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 54341143 - 54341383
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  54341143 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 54341242  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54341243 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 54341342  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttct 241  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  54341343 tgagattgtttttattttaaaagttactatttttttcttct 54341383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 37828609 - 37828367
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  37828609 tcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 37828510  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37828509 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttct 37828410  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  37828409 tgagattgtttttattttaaaaattactatctttttcttctca 37828367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 51320920 - 51321159
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  51320920 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 51321019  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  51321020 ttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttct 51321119  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttc 240  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  51321120 tgagattgtttttcttttaaaagttactatctctttcttc 51321159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 54853675 - 54853448
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||    
T  54853675 tcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaat 54853576  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  54853575 ttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 54853476  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    ||||||||||||| ||||||||||||||    
T  54853475 tgagattgtttttcttttaaaagttact 54853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 37915826 - 37916057
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  37915826 tcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 37915925  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| |    
T  37915926 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagatttat 37916025  T
Q  201 tgagattgtttttattttaaaagttactatct 232  Q
    ||||||||||||| ||||||||||||||||||    
T  37916026 tgagattgtttttcttttaaaagttactatct 37916057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 242
Target Start/End: Original strand, 32322092 - 32322331
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||| ||||||||||||||||||||||||||    
T  32322092 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaattt 32322191  T
Q  103 caaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 202  Q
    | || ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  32322192 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttcttg 32322291  T
Q  203 agattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||| |||||| |||||  |||| |||||||||    
T  32322292 agattgtttttcttttaatagttatcatctctttcttctc 32322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 23987213 - 23987444
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  23987213 tcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 23987312  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||| |||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23987313 ttcgaaggattgtttaataaattagattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 23987402  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  23987403 tgagattgtttttcttttaaaagttactatctctttcttctc 23987444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 30967506 - 30967276
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  30967506 tcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 30967407  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| ||||||||||||          ||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  30967406 ttcaaaggattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttct 30967317  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttct 241  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  30967316 tgagattgttttttttttaaaagttactatctctttcttct 30967276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 41725124 - 41725359
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||  || |||||||| |||| |||||||||||||||||||    
T  41725124 tcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaat 41725223  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || |||||||   ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41725224 tttgaaggattgtt---taaattggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 41725320  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||   ||| |||||||||||||||||||||||||||||||||    
T  41725321 tg---ttggttttattttaaaagttactatctttttcttctc 41725359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 48261187 - 48261368
Alignment:
Q  62 atttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaatt 161  Q
    ||||| |||||||| ||||||||||||||||||||||||||  || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  48261187 atttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatt 48261286  T
Q  162 ttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48261287 ttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 48261368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 49501718 - 49501485
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||| ||||| ||||||||||||||||||    
T  49501718 tcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaat 49501619  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagattt 198  Q
    ||| |||||||||| ||||||||||||          ||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  49501618 ttcgaatgattgtttaataaattggat----------tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagattt 49501529  T
Q  199 cttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||    
T  49501528 cttgagattgtttttcttttaaaagttattatctctttcttctc 49501485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 49507783 - 49507550
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||| ||||| ||||||||||||||||||    
T  49507783 tcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaat 49507684  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagattt 198  Q
    ||| |||||||||| ||||||||||||          ||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  49507683 ttcgaatgattgtttaataaattggat----------tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagattt 49507594  T
Q  199 cttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||    
T  49507593 cttgagattgtttttcttttaaaagttattatctctttcttctc 49507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 1112892 - 1113104
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  1112892 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 1112991  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||||||||||| |||||||  ||||||||| |||||||||||||||  ||||  |||||||||| |||||||||||||||||||| |||||||||||    
T  1112992 ttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttct 1113091  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  1113092 taggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 25331130 - 25331342
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  ||| |||||||||||||||||||    
T  25331130 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaat 25331229  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  25331230 ttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 25331329  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  25331330 taggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 49835020 - 49834799
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  49835020 tcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 49834921  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||                    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  49834920 ttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttct 49834841  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| | |||||||||||||||| |||||||||    
T  49834840 tgagattgtttttctattaaaagttactatctatttcttctc 49834799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 50018250 - 50018449
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||    
T  50018250 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaat 50018349  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| ||||||||| ||||| ||          ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  50018350 tttgaaggattgtttaataaattgaattttaat----------ggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttat 50018439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 55302842 - 55303051
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  55302842 tcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 55302941  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| ||| |||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  55302942 ttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 55303041  T
Q  201 tgagattgtt 210  Q
    | ||||||||    
T  55303042 taagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 32684194 - 32683988
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32684194 tcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcattta-aaaaagtcttgtggtattcaaaatcattcaaat 32684096  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32684095 ttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttat 32684016  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    ||||||||||||| ||||||||||||||    
T  32684015 tgagattgtttttcttttaaaagttact 32683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 5799976 - 5800208
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    ||||||||||||||||||||||||||||||   |||| |||||  ||||| ||||||||||| ||| ||||| ||| |||||||||||||||||||||||    
T  5799976 tcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaa 5800075  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    ||||||| ||||||| |||||||||          ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| ||||||     
T  5800076 tttcaaaggattgtttaataaattg----------gattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagataagatttt 5800165  T
Q  200 ttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    |||||||||||||| |||||||||||| ||||| |||| ||||    
T  5800166 ttgagattgtttttcttttaaaagttattatctctttcatctc 5800208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 41881290 - 41881077
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| ||   ||||||||||||||||||||||    
T  41881290 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaa 41881191  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  41881190 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 41881091  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  41881090 ttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 44771061 - 44770821
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggta-ttcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||| ||||| ||   |||||||||||||||||||||    
T  44771061 tcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaatcattcaaa 44770962  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||  || ||||||| |||||||||||||||| | |||||||||||||||| ||||| |||||||| |||||||||||||||||||  | ||||||||||    
T  44770961 ttttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgacatgagatttc 44770862  T
Q  200 ttgagattgtttttattttaaaag-ttactatctttttcttctc 242  Q
       | |||| |||| ||||||||| ||||||||| |||| ||||    
T  44770861 ---atattgcttttcttttaaaagtttactatctctttcctctc 44770821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 12112944 - 12113156
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| || |||| ||| ||||||||   ||||||||||||||||||||||    
T  12112944 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaat 12113043  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  |||||| || |||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  12113044 ttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 12113143  T
Q  201 tgagattgttttt 213  Q
    || ||||||||||    
T  12113144 tgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22202014 - 22202214
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||| ||||    
T  22202014 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaat 22202113  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| |||||||   |||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||||    
T  22202114 ttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttct 22202213  T
Q  201 t 201  Q
    |    
T  22202214 t 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 34228790 - 34228578
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||| || ||||||||||||| | | || |||| ||| ||||||||  |||||||||||||||||| ||||    
T  34228790 tcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaat 34228691  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||  ||||||||| |||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  34228690 ttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 34228591  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  34228590 taagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 213
Target Start/End: Complemental strand, 30009882 - 30009672
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    |||||| | ||||| |||||| ||||||||| || ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||| ||||||    
T  30009882 aatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattt 30009783  T
Q  103 caaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 202  Q
     ||||||||||| |||||||  ||||||||| |||||||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||||||||||     
T  30009782 taaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 30009683  T
Q  203 agattgttttt 213  Q
    |||||||||||    
T  30009682 agattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 12913229 - 12913455
Alignment:
Q  7 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||   ||||||||||||||||||||||||  ||    
T  12913229 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttgaa 12913328  T
Q  107 tgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 206  Q
     ||||||| |||||||||          |||||||||||||||| ||||| ||||||||||||||||||| ||||||||| | |||||||||||||  ||    
T  12913329 ggattgtttaataaattg----------gattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttcttggaat 12913418  T
Q  207 tgtttttattttaaaag-ttactatctttttcttctc 242  Q
    | ||||| ||||||||| ||||||||  |||||||||    
T  12913419 tatttttcttttaaaagtttactatcagtttcttctc 12913455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 26 - 242
Target Start/End: Original strand, 28483923 - 28484127
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattgg 125  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||| || |||| || |||||||||     
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattg- 28484021  T
Q  126 attttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 225  Q
             |||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||| ||    
T  28484022 ---------gattttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa-tt 28484110  T
Q  226 actatctttttcttctc 242  Q
    ||||||| |||||||||    
T  28484111 actatctctttcttctc 28484127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 32951043 - 32950831
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||||||| ||||||||| || ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  32951043 tcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 32950944  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  |||||||||  ||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||||||||||    
T  32950943 ttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttct 32950844  T
Q  201 tgagattgttttt 213  Q
    | ||||| |||||    
T  32950843 taagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 29649865 - 29649731
Alignment:
Q  10 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| || ||    
T  29649865 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaaga 29649766  T
Q  110 ttgttcaataaattggattttgatagattttgtgg 144  Q
    ||||| |||||||||||||||||| ||||||||||    
T  29649765 ttgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 7007373 - 7007585
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||| |||||||| ||||||||| || ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  7007373 tcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 7007472  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  |||||||||  ||||||||||||||| ||||| ||||||| || |||||  | ||||||||||| |||||||||||    
T  7007473 ttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttct 7007572  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  7007573 taagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 36479438 - 36479228
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||||  |||||||||||||| ||||||||    
T  36479438 tcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaat 36479339  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || |||| || |||||||||||||||||| ||||||           ||||| ||||||| ||| ||||||||||| ||||||| |||||||||||    
T  36479338 ttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttct 36479250  T
Q  201 tgagattgtttttattttaaaa 222  Q
    ||||||| ||||| ||||||||    
T  36479249 tgagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 39479564 - 39479350
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa--gtcctgtggtattcaaaatcattcaa 98  Q
    |||||||||| || ||||||||| |||||||||||| ||||||||||||||||| || |||| ||| |||||  | | ||||||||||||||||||||||    
T  39479564 tcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaa 39479465  T
Q  99 atttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    ||||| ||  |||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||  |||||||||    
T  39479464 atttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagattt 39479365  T
Q  199 cttgagattgttttt 213  Q
    |||  ||||||||||    
T  39479364 cttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 19741115 - 19740929
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||  |||||||| || |||||||| ||||||||||| |||| ||| |||||||| ||||||||| ||||||||||||||    
T  19741115 tcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaat 19741016  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 187  Q
    ||| || ||||||| |||||||| ||||||||| |||||||||||||||| ||||| ||||||| |  |||||||||||||||||||    
T  19741015 ttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 213
Target Start/End: Original strand, 42786708 - 42786895
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattgg 125  Q
    ||||||||||| ||||||||||||||||| || |||||||| ||||||||  |||||||||||||||||||||||||| || ||||||| |||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  126 attttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    |||||||| |||||||||| ||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||||||||  ||||||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 9163075 - 9163286
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||  || |||||||| |||| |||||||||||||||||||    
T  9163075 tcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaat 9163174  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||  |||||||| |||||||||| ||||| ||||| ||||||| || |||        ||||||||| |||||||||||    
T  9163175 ttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacatgagatttct 9163266  T
Q  201 tgagattgtttttattttaa 220  Q
    |  |||||||||| ||||||    
T  9163267 tatgattgttttttttttaa 9163286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 1044808 - 1045006
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || |||||||||  ||||||||||| ||||||||||||||||| || |||| ||| ||||||||  ||||||||||||| ||||||| |    
T  1044808 tcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaact 1044905  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||||    
T  1044906 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttct 1045005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 28541697 - 28541874
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||| | ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  28541697 tcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 28541796  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtct 178  Q
    ||| |||||||||| |||||||  ||||||||| |||||||||| ||||| ||||| ||||||| || ||||||||||    
T  28541797 ttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 3436592 - 3436792
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||| ||| |||||| ||||| | ||||||||||||||| || |||||||| ||||| ||   ||||||||||||||||||||||    
T  3436592 tcaatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaat 3436691  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  |||||||||  ||||||||||||||||||||| |||||||||| |||||||| ||||||||||| || ||||||||    
T  3436692 ttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttct 3436791  T
Q  201 t 201  Q
    |    
T  3436792 t 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 39307460 - 39307260
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||| |||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||||||||||||    
T  39307460 tcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaat 39307361  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || |||| || ||| |||||  |||||||  ||||||||||||||| ||||| |||||||||| |||||||| | | || |||| |||||||||||    
T  39307360 ttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttct 39307261  T
Q  201 t 201  Q
    |    
T  39307260 t 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 25446050 - 25446227
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||||||| |||||| ||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  25446050 tcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 25446148  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 179  Q
    ||| |||||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||    
T  25446149 ttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 37046659 - 37046445
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||| ||| ||||| |||  ||| |||| |||||||||||||    
T  37046659 tcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaa 37046560  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtg-taattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    |||| || ||||||| |||||||  ||||||||| |||||||||| ||||| |||||  ||||||| || |||||||||||||||||||| |||||||||    
T  37046559 tttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagattt 37046460  T
Q  199 cttgagattgttttt 213  Q
    |||  ||||||||||    
T  37046459 cttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 46635849 - 46635643
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| |||||||   || ||||||||||||||||||||    
T  46635849 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaat 46635750  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||      |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |||||||||||    
T  46635749 ttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 46635656  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  46635655 taggattgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 28370923 - 28371093
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||||| |||||| |||| ||| | ||||||   ||||||||||||||||||||||    
T  28370923 tcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaat 28371022  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaa 171  Q
    || ||| ||||||| ||||||||| |||||| |  ||||||||||||||| ||||| |||||||| |||||    
T  28371023 tttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaattttaagaagaa 28371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 213
Target Start/End: Original strand, 41320853 - 41321021
Alignment:
Q  45 aatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgg 144  Q
    |||||||||| || |||||||| ||||||||  |||||||||||||||||||||||||| || ||||||| |||||||  ||||||||| ||||||||||    
T  41320853 aatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 41320952  T
Q  145 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    ||| || ||||| |||||||  | ||||||||||||||| |||| |||||||||||| |||||| ||||    
T  41320953 gatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgagatttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 8711980 - 8712086
Alignment:
Q  116 aataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttat 215  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  8711980 aataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgtttttct 8712079  T
Q  216 tttaaaa 222  Q
    |||||||    
T  8712080 tttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24131179 - 24130976
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  ||||||||||||          |    
T  24131179 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa----------t 24131090  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagatgagatttc 199  Q
    ||| |||||||||| |||||||  ||||||||| |||||||||||||||| ||||| |||||||  | | ||||| ||||||||||||| ||||||||||    
T  24131089 ttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttc 24130990  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  24130989 ttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 213
Target Start/End: Complemental strand, 31314933 - 31314737
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    |||||||| |||||||||||| |||||||||||| |||||||||    |||| || |||| ||| ||||||||  |||||||||||||||||||||||||    
T  31314933 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 31314838  T
Q  103 caaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 202  Q
    | || ||||||| |||||||           ||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||     
T  31314837 cgaaggattgtttaataaat----------cagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 31314748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 40537352 - 40537150
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || |||| ||| ||||     ||||||||||||||||||| ||||    
T  40537352 tcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaaaatcatttaaat 40537258  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||  |||||||||          ||||||||| ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  40537257 ttcgaatgattgtttaataaatctgattttgat----------ggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 40537168  T
Q  201 tgagattgtttttatttt 218  Q
    |  |||| ||||| ||||    
T  40537167 taggattttttttttttt 40537150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25504846 - 25504697
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||  |||||| |||||| ||||| | ||||||||||||||| || |||| ||| ||||||||| ||| |||||||||||||||||||    
T  25504846 tcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaat 25504747  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggatttt 150  Q
    ||| || ||||||| |||||||  ||||||||| ||||||||||||||||    
T  25504746 ttcgaaggattgtttaataaatcagattttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 53275838 - 53276025
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||| | |||||||||| ||||||||||||  |||||||||||||| |||| |||| ||| ||||||||  ||| |||| ||||||||||||||    
T  53275838 tcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaat 53275937  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 188  Q
    ||| || ||||||  |||||||  ||||||||| ||||||||| |||||| || |  ||||||| || ||||||||||||||| ||||    
T  53275938 ttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 41581991 - 41581796
Alignment:
Q  5 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttca 104  Q
    |||||||  ||||||||||||||||||||||| |||||||| | |||| ||||| | | ||| ||||||||  |||||||| | | ||||||||||||      
T  41581991 tcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttg 41581892  T
Q  105 aatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagatgagatttctt 201  Q
    ||| |||||| |||||||||||  |||||| ||||||||||||||| ||||| |||||||||| | ||||| | ||||||| ||| ||||||||||||    
T  41581891 aataattgtttaataaattgga--ttgatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaacatgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 24736449 - 24736546
Alignment:
Q  116 aataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    |||||||||||||||||| ||||||||| |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24736449 aataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 23464954 - 23465119
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || ||||||||| |||||||| |||   ||||||||||||||| || |||| ||| || |||||  ||||||||||||| |||||||||    
T  23464954 tcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaat 23465053  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaac 166  Q
    ||| || ||||||| |||||||  || |||||| |||||||||||||||| ||||  |||||||||    
T  23465054 ttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaattttaac 23465119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  79 tggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtct 178  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||          ||||||||| ||||| || |||| |||||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg----------tgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  179 ttcatgaaaagatgagatttcttgagattgttttt 213  Q
    ||||| || | ||||||||||||||||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 178
Target Start/End: Complemental strand, 7249905 - 7249795
Alignment:
Q  68 aaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaaca 167  Q
    ||||||||  |||||||||||||||||||||||||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| ||    
T  7249905 aaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagca 7249806  T
Q  168 agaaaaagtct 178  Q
     ||||||||||    
T  7249805 tgaaaaagtct 7249795  T

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Target: chr4; HSP #58
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 20021343 - 20021570
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||   | ||          ||||||||    
T  20021343 tcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatcactta-aaaaagtctcattgt----------attcaaat 20021431  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaac-aagaaaaagtctttcatgaaaagatgagatttc 199  Q
    || ||| ||||||| |||||||| ||||||| | |||||| ||||||||| || || ||||||||| || ||||| ||||||||||| | || |||||||    
T  20021432 tttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacataagatttc 20021531  T
Q  200 ttgagattgtttttattttaaaagttactatctttttctt 239  Q
     || ||||  ||||  ||| ||||||||||||| ||||||    
T  20021532 atgggattactttt-ctttgaaagttactatctctttctt 20021570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 27454208 - 27454073
Alignment:
Q  78 gtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtc 177  Q
    |||||||||||||||||||||||||  || |||| || |||||||  |||||||||  ||||||||| ||||| ||||| ||||||  || |||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  178 tttcatgaaaagatgagatttcttgagattgttttt 213  Q
    ||||||||||| || | |||| || |||||||||||    
T  27454108 tttcatgaaaacataatatttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 242
Target Start/End: Complemental strand, 36728022 - 36727916
Alignment:
Q  135 gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatcttt 234  Q
    |||||||| ||||||| ||||| ||||||||||||||||| ||||||||| | | ||||||||| |||||||||||||| |||||||  ||||| ||  |    
T  36728022 gattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttttttaaagtttactgtcact 36727924  T
Q  235 ttcttctc 242  Q
    ||||||||    
T  36727923 ttcttctc 36727916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37915742 - 37915829
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||| | || |||||||||||| ||||||||||||||||||||  ||| ||| |||||||| ||||||||||||    
T  37915742 tcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaa 37915829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37915784 - 37915871
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||| || |||||||||||| ||||||||||||||||| |  |||||||  |||||||| || |||||||||    
T  37915784 tcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaa 37915871  T

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Target: chr4; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40537394 - 40537307
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||| |||||||||| | |||| |||||||||||| | ||||||||||||||| ||  ||||||| |||||||| ||||||||||||    
T  40537394 tcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaa 40537307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41881332 - 41881245
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   ||||||||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  41881332 tcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 41881245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5441361 - 5441448
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  5441361 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 5441448  T

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Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 9163057 - 9163120
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||| ||  ||||||| |||||||| ||||||||||||    
T  9163057 aaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaa 9163120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 11090437 - 11090520
Alignment:
Q  135 gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 218  Q
    |||||||||||||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  11090437 gattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22201972 - 22202059
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  22201972 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 22202059  T

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Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24131221 - 24131134
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  24131221 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 24131134  T

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Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25331088 - 25331175
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  25331088 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 25331175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30009926 - 30009839
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | |||| |||||| | | || |||||||| |||||||||||||||||||||    
T  30009926 tcaatcaagactctttccaatttaaaaaaagtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaa 30009839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32951085 - 32950998
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  32951085 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaa 32950998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19741157 - 19741071
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattca 87  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| |||||||||||    
T  19741157 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattca 19741071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11090348 - 11090408
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 61  Q
    |||||||||| |||||| || || |||||||| ||| ||||||||||||||||||||||||    
T  11090348 tcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 50018189 - 50018253
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||| |||||||||||||||||||| |  ||||| |||||||| | ||||||||||    
T  50018189 taaaaaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtcttatggtattcaa 50018253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25504888 - 25504801
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | || |||||||| ||||| || |||| |||||||    
T  25504888 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaa 25504801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27768013 - 27768100
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| | ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  27768013 tcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 27768100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28541655 - 28541742
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| ||||||||  |||||||||||    
T  28541655 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaa 28541742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30967548 - 30967461
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||  || |||||||||    
T  30967548 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaa 30967461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37046701 - 37046614
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||  ||||||||||||    
T  37046701 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaa 37046614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39479606 - 39479519
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| |  |  ||||||| |||||||| ||||||||||||    
T  39479606 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaa 39479519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 54341101 - 54341188
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||  ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  54341101 tcaatcaagactttttgcaatttaaaaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 54341188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 5441344 - 5441406
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  5441344 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 5441406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 29855682 - 29855728
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 49  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  29855682 aatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 30967565 - 30967503
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  30967565 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 30967503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 37915725 - 37915787
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||  | | ||| |||||||| ||||||||||||    
T  37915725 aaaaagtcttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaa 37915787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12112901 - 12112989
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaa-aagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||| |||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  12112901 tcaatcaagactctttcaaatttaaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 12112989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1112850 - 1112937
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||| |||   ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  1112850 tcaatcaagactctttccgatttaaaaaaagtattgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 1112937  T

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Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31314977 - 31314890
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| |||   |||| |||||||||||| | |||| |||||||| | ||  ||||||| |||||||| ||||||||||||    
T  31314977 tcaatcaagacttttttcaatttaaaaaaagtcttgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 31314890  T

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Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34228831 - 34228745
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||| | | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  34228831 tcaatcaagactcttttcaatttaaaaaaagtct-gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaa 34228745  T

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Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37828651 - 37828564
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||| ||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  37828651 tcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaa 37828564  T

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Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 46635891 - 46635804
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||| |||||   ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  46635891 tcaatcaagactctttccaatttaaaaaaaatcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 46635804  T

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Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51320878 - 51320965
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||| ||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  51320878 tcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 51320965  T

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Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 54853717 - 54853630
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| ||  ||||||||    
T  54853717 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaa 54853630  T

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Target: chr4; HSP #97
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 55302800 - 55302887
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | | ||||||||||| | ||  ||||||  |||||||| ||||||||||||    
T  55302800 tcaatcaagactcttttcaatttaaaaaaagtcttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaa 55302887  T

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Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7007330 - 7007418
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaa--aagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| ||| |||||||  |||||||| | ||||||||||||| | |   ||||||| |||||||| ||||||||||||    
T  7007330 tcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaa 7007418  T

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Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 12913157 - 12913223
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-agaaaaagtcctgtggtatt 85  Q
    ||||| ||||||||||| ||||||||||||||||| || || |||| | |||||||| |||||||||    
T  12913157 attttgaaaaagtcttgtggtattcaatcaagactctttataatttaaaaaaaagtcttgtggtatt 12913223  T

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Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 27767996 - 27768058
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||| ||||    ||||| |||||||| ||||||||||||    
T  27767996 aaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaa 27768058  T

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Target: chr4; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 41320788 - 41320830
Alignment:
Q  12 tctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54  Q
    ||||| |||||| |||||||||||| |||||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaagact 41320830  T

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Target: chr4; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 54341084 - 54341146
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| | ||||||||||    
T  54341084 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttatggtattcaa 54341146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 54853734 - 54853672
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  54853734 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 54853672  T

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Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 20021303 - 20021352
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 52  Q
    |||||||||||||||  |||| |||||||| ||| |||||||||||||||    
T  20021303 aatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaaga 20021352  T

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Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 28100617 - 28100584
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||| ||||||||||||||||||||    
T  28100617 taaaaaagtcttgtggtattcaatcaagactttt 28100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50018208 - 50018293
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattc 86  Q
    |||||||||||| |||   |||| |||||||||||  ||||||||||||||||| ||  ||||||  |||||||| || |||||||    
T  50018208 tcaatcaagactttttacaatttaaaaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattc 50018293  T

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Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1044767 - 1044851
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||  || ||||||||||||||| | ||||||||||||| |  |  ||||||  |||||||| ||||||||||||    
T  1044767 tcaatcaagactctttc-caatttaaaaaagtcttgtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaa 1044851  T

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Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12913180 - 12913268
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaa-aagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| | |||| |||| |||||||| |||||| ||| |||||| ||  ||||||  |||||||| || |||||||||    
T  12913180 tcaatcaagactctttataatttaaaaaaaagtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 12913268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 26336123 - 26336159
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26336123 ttttaaaaatgtctttaggtattcaatcaagactttt 26336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 37046720 - 37046656
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||| ||||||||||||||||| ||    ||||| |||||||| |||| |||||||    
T  37046720 taaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaa 37046656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 39479625 - 39479561
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||| ||||||||||||||||| ||    ||||| |||||||| |||| |||||||    
T  39479625 taaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaa 39479561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 40537413 - 40537349
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||| |||||||||| |||||| ||  | ||||| |||||||| |||| |||||||    
T  40537413 taaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaa 40537349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 41762017 - 41762061
Alignment:
Q  13 ctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||| ||| ||||||||||||| |||||| |||||||||||||    
T  41762017 ctttgtgattataaaaaagtcttgtggtattgaatcaagactttt 41762061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 47685190 - 47685226
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||||||| |||| |||||||||||||||||||||    
T  47685190 ttttaaaaaaatctttaggtattcaatcaagactttt 47685226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 108)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 23101292 - 23101532
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  23101292 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 23101391  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101392 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 23101491  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttct 241  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23101492 tgagattgtttttattttaaaagttactatctttttcttct 23101532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 28342341 - 28342583
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  28342341 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 28342440  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342441 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 28342540  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28342541 tgagattgtttttattttaaaagttactatctttttcttctca 28342583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 29614970 - 29614728
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  29614970 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaat 29614871  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614870 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 29614771  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  29614770 tgagattatttttattttaaaagttactatctttttcttctca 29614728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 39784093 - 39784326
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  39784093 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaat 39784192  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784193 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 39784292  T
Q  201 tgagattgtttttattttaaaagttactatcttt 234  Q
    ||||||||||||||||||||||||||||||||||    
T  39784293 tgagattgtttttattttaaaagttactatcttt 39784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 18838383 - 18838624
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||    
T  18838383 tcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaat 18838482  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18838483 ttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttct 18838582  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  18838583 tgagattgtttttcttttaaaagttactatctctttcttctc 18838624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 3022920 - 3023161
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  3022920 tcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 3023019  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3023020 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttct 3023119  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  3023120 tgagattgtttttcttttaaaagttagtatctctttcttctc 3023161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9882442 - 9882202
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  9882442 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 9882343  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  9882342 ttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttct 9882244  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  9882243 tgagattgtttttcttttaaaagttattatctctttcttctc 9882202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 28035011 - 28034770
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||    
T  28035011 tcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaat 28034912  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28034911 ttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttct 28034812  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| ||||| |||||||||||| |||||||||    
T  28034811 tgagattgtttttcttttacaagttactatctctttcttctc 28034770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 8675327 - 8675567
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||     
T  8675327 tcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaac 8675426  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  8675427 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttct 8675526  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||| ||||||||||||| |||||||||    
T  8675527 tgagattgtttttctttt-aaagttactatctatttcttctc 8675567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 33382631 - 33382872
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||   ||||||||||||||||| ||||    
T  33382631 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaat 33382730  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  33382731 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttat 33382830  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    | ||||||||||| |||||||| ||||||||| |||||||||    
T  33382831 ttagattgtttttcttttaaaatttactatctctttcttctc 33382872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 509650 - 509882
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  509650 tcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 509749  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  509750 ttcgaacgattgtttaataaattggattttgat----------ggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttct 509839  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  509840 tgagattgtttttattttaaaagttactatctttttcttctca 509882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 7993136 - 7993367
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| | ||||||||||||||||||||||    
T  7993136 tcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaat 7993235  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7993236 ttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttct 7993335  T
Q  201 tgagattgtttttattttaaaagttactatct 232  Q
    ||||||||||||| ||||||||||||||||||    
T  7993336 tgagattgtttttcttttaaaagttactatct 7993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 12740367 - 12740607
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||    
T  12740367 tcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaat 12740466  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  12740467 ttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttct 12740565  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    | ||||||||||  |||||||||||||| ||| |||||||||    
T  12740566 taagattgttttacttttaaaagttactgtctctttcttctc 12740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 44122106 - 44121875
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  44122106 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaat 44122007  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  44122006 ttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttt 44121917  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  44121916 tgagattgtttttcttttaaaagttactatctctttcttctc 44121875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 46405637 - 46405406
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  46405637 tcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 46405538  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||||||||||| ||||||||||||||||||          ||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  46405537 ttcaaatgattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtatttaataaaaagatgagatttct 46405448  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| ||| |||||    
T  46405447 tgagattgtttttcttttaaaagttactatctcttttttctc 46405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 40460913 - 40460683
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  40460913 tcaattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 40460814  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  40460813 ttcgaatgattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttct 40460724  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttct 241  Q
    ||||||||||||| |||||||||||||||||| ||| ||||    
T  40460723 tgagattgtttttcttttaaaagttactatctctttgttct 40460683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 37327921 - 37328152
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||    
T  37327921 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaat 37328020  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| ||||||||| ||||||||          |||||||||||| |||||||||||| |||||||||||||||||||||| |||||| |    
T  37328021 ttcaaaggattgtttaataaattgaattttgat----------ggattttgtagtataattttaacaaaaaaaagtctttcatgaaaagataagattttt 37328110  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| ||||||||||||||||||  ||||||||    
T  37328111 tgagattgtttttcttttaaaagttactatctccttcttctc 37328152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 44256970 - 44256734
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||   |||||||||||||||||||||||||    
T  44256970 aatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaattt 44256871  T
Q  103 caaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 202  Q
    | |||||||||| |||||||||||||| |||  ||||||| |||||||| |||||||||||||||||||||||| |||||| |||| ||||||||| |||    
T  44256870 cgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattttttg 44256771  T
Q  203 agattgtttttattttaaaagttactatctttttctt 239  Q
    ||||||||||| |||||||||||| ||||| ||||||    
T  44256770 agattgtttttcttttaaaagttattatctctttctt 44256734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 39028091 - 39028322
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| |||| ||||||||||| |||||||    
T  39028091 tcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaat 39028190  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    | | || ||||||| ||||||||||||||||||          |||||||||||||||| |||||||||||||||| |||||||||||   |||||||||    
T  39028191 tacgaaagattgtttaataaattggattttgat----------ggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagagatttct 39028280  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  39028281 tgagattgtttttcttttaaaagttactatctctttcttctc 39028322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 41827308 - 41827539
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| | ||| |||||||| |||||||||||||||             
T  41827308 tcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat--------- 41827398  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
     |  || ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  41827399 -ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttct 41827497  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  41827498 tgagattgtttttcttttaaaagttactatctctttcttctc 41827539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 32883776 - 32884002
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  32883776 tcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 32883875  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||||               ||||||||||||||| |    
T  32883876 ttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaa---------------gaaaagatgagatttat 32883960  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||| | |||||||||    
T  32883961 tgagattgtttttcttttaaaagttactatttgtttcttctc 32884002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 29585509 - 29585739
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||| |||||||| | ||||||||||||||||||||||    
T  29585509 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcattcaaat 29585607  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| ||||| ||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  29585608 tttgaaggattgtttaataatttggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttct 29585697  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||| | | |||||||||    
T  29585698 tgagattgtttttcttttaaaagttactgtatctttcttctc 29585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 33892456 - 33892212
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||    
T  33892456 tcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaat 33892357  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag----------- 189  Q
    ||| |||||||||| ||||||||||||||| ||          | |||||||||||||||||||||||||||||||||||||| |||||               
T  33892356 ttcgaatgattgttaaataaattggatttttat----------gaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagattttt 33892267  T
Q  190 --atgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
      |||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  33892266 taatgagatttcttgagattatttttcttttaaaagttactatctctttcttctc 33892212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 973185 - 973397
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| |   |||||||||||||||||||||||    
T  973185 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaat 973284  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  973285 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttct 973384  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  973385 taggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 10068462 - 10068682
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatt 101  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  10068462 aatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10068561  T
Q  102 tcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 201  Q
    |  || ||||||| ||||||||  |||||||| |||||||||||||||| ||||| ||||||| || |||||||| |||||| |||| ||||||||| ||    
T  10068562 ttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgtt 10068661  T
Q  202 gagattgtttttattttaaaa 222  Q
      |||||||||| ||||||||    
T  10068662 aggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 47914267 - 47914479
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||| || ||||||||||||||||| || |||| ||| ||||||||  ||| |||||||||||||||||||    
T  47914267 tcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaat 47914366  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  47914367 ttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 47914466  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  47914467 taagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 12963695 - 12963911
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||| ||||||||  ||||||| |||||||||||||||    
T  12963695 tcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaat 12963794  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||| ||||||||| |||||||||||||||| ||||| |||||||  ||||||||||||||  |      |||||||||||    
T  12963795 ttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----catgagatttct 12963889  T
Q  201 tgagattgtttttattttaaaa 222  Q
    ||||||||||||| ||||||||    
T  12963890 tgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 7719466 - 7719254
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| | | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| ||  |||||||||||||||||||||||    
T  7719466 tcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaat 7719367  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  7719366 ttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 7719267  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  7719266 taggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 18914941 - 18914729
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| | |||||||| ||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  18914941 tcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 18914842  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| | ||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  18914841 ttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 18914742  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  18914741 taggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 34695274 - 34695486
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || ||||||||| |||||||| ||| ||||||||||||||||| || |||| ||| ||||||||| ||||||||||||| |||||||||    
T  34695274 tcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaat 34695373  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  34695374 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 34695473  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  34695474 taggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 40996855 - 40996643
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||  ||| ||||||||  |||||||||||||||||||||||    
T  40996855 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaat 40996756  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  40996755 ttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 40996656  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  40996655 taggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 43581296 - 43581096
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  43581296 tcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 43581197  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  43581196 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 43581097  T
Q  201 t 201  Q
    |    
T  43581096 t 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 47879169 - 47879381
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||| || ||||||||||||||||| || |||| ||| ||||||||  ||| |||||||||||||||||||    
T  47879169 tcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaat 47879268  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    || ||| ||||||| |||||||  ||||||||| |||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  47879269 ttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 47879368  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  47879369 taagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 30440797 - 30441009
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  30440797 tcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 30440896  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| |||||||  | ||||||||||||| |||||| |||||||||||    
T  30440897 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttct 30440996  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  30440997 taggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 12893409 - 12893621
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| |||||| |||||||||| || |||| ||| ||||||||   ||||||||||||||||||||||    
T  12893409 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaat 12893508  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| ||  |||||| |||||||  ||||||||| ||||||||| |||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  12893509 ttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 12893608  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  12893609 taggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 44343602 - 44343390
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| | ||||||||||||||| || |||| ||| |||||||   |||||||| ||||||||||||||    
T  44343602 tcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaat 44343503  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||| ||||| |||||||||||    
T  44343502 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttct 44343403  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  44343402 taggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 7718549 - 7718356
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaata 119  Q
    |||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||||| || ||||||| ||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  120 aattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    |||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 93 - 242
Target Start/End: Complemental strand, 37972981 - 37972832
Alignment:
Q  93 attcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 192  Q
    ||||||||||| || |||| || |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  193 agatttcttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||| ||||||||||||||||| |||||||||||| ||||| |||||||||    
T  37972881 agacttcttgagattgtttttcttttaaaagttattatctctttcttctc 37972832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 20275469 - 20275269
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || ||||||||| |||||||||||  ||||||||||||||||| || |||| ||| |||||||| | ||||||||||||||||||||||    
T  20275469 tcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaat 20275370  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||| ||||||||  |||||||||||    
T  20275369 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttct 20275270  T
Q  201 t 201  Q
    |    
T  20275269 t 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 3797263 - 3797052
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| |||||| ||||    
T  3797263 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaat 3797164  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||| ||||||||         ||||||||| ||||| ||||||| || |||||||||||| | ||||| || ||||||||    
T  3797163 tttgaaggattgtttaataaattagattttga---------tgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttct 3797074  T
Q  201 tgagattgtttttattttaaaa 222  Q
    |  |||||||||| ||||||||    
T  3797073 taggattgtttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 19251533 - 19251734
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||  |||||||||||||||||||||||    
T  19251533 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaat 19251632  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          ||||||| | ||| ||||||| ||| |||||||||||||||||||  ||| ||||||    
T  19251633 ttcgaaggattgtttaataaattggattttgat----------ggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttct 19251722  T
Q  201 tgagattgtttt 212  Q
    || |||| ||||    
T  19251723 tgggattatttt 19251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 34009013 - 34009226
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcct-gtggtattcaaaatcattcaaa 99  Q
    |||||||||| | |||||||||| |||||||||||| ||||||||||||| ||| || |||| ||| |||||||||| ||||||||||||||||||||||    
T  34009013 tcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaa 34009112  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| |||||||  ||||||||| |||||||||| ||||| || |  ||||||| ||  ||||||||||||| ||||| ||||||||||    
T  34009113 tttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttc 34009212  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  34009213 ttaggattgttttt 34009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 17001229 - 17001037
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||| |   |||||||||||||||||||||||    
T  17001229 tcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaat 17001130  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||                    |||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  17001129 ttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttct 17001050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 32143112 - 32142911
Alignment:
Q  14 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt--agaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgatt 111  Q
    |||||||||| |||||||||||  |||||| |||||||||| || |||| ||  | ||||||||  |||||||||||||||||||||||||  || ||||    
T  32143112 tttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattcaaaatcattcaaattttgaaggatt 32143013  T
Q  112 gttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttt 211  Q
    ||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||| ||| |||| |||||||||||| |||||||||    
T  32143012 gtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaaaacatgagatttcttaagattgttt 32142913  T
Q  212 tt 213  Q
    ||    
T  32142912 tt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 55 - 225
Target Start/End: Complemental strand, 43187509 - 43187339
Alignment:
Q  55 tttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtag 154  Q
    |||||||| ||| ||||||||   ||||||||||||||||||||||||  ||  |||||| ||||||||||||||||||  ||||||| ||||||| |||    
T  43187509 tttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctag 43187410  T
Q  155 tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 225  Q
    || ||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||| |||||||||||    
T  43187409 tgaaattttaacaagaaaaagtctttcatgaagacatgagattttttgggattgtttttcttttaaaagtt 43187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 39219583 - 39219371
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    ||||||||||||||||   |||| |||||| |||||| | ||||||||||||||| || |||| ||| ||||||||   |||||||||||||||||||||    
T  39219583 tcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaa 39219484  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||  | |||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||    
T  39219483 ttttga-tgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttc 39219385  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  39219384 ttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 7113457 - 7113665
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||| | ||| |||||| |||||||| ||| ||||||||||    |||||| |||| ||| ||||||||| |||||||||||||| ||||||||    
T  7113457 tcaattaagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagtggtattcaaaataattcaaat 7113552  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||  | ||||||| |||||||  |||||||||||||||||||||||||| |||   ||||||| || |||||||||||||||||||| |||| ||||||    
T  7113553 ttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcatgaaaacatgaaatttct 7113652  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  7113653 taggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 10676624 - 10676460
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    |||||||||||||||  |||| ||||| |||||| ||||||||||||||||||||||||| ||| ||||||||   | ||||||||||||||||||||||    
T  10676624 aatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaattt 10676525  T
Q  103 caaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaaca 167  Q
    | || ||||||| |||||||||||||| ||| |||||| ||| ||||| | ||| ||||||||||    
T  10676524 cgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaattttaaca 10676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 47066697 - 47066881
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||||| ||| ||||| ||| |||||||||||||||||||||||    
T  47066697 tcaatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaa 47066796  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| ||||||||||||                    ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  47066797 tttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttc 47066876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 9179874 - 9180076
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||| |||  |||||||||||||||| ||||||| ||| |||||||| |||||||| |||||||| | ||||    
T  9179874 tcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaat 9179973  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    | | || ||||||| |||||||||          |||||||||||||||| ||||| | ||||| ||  ||||||||||||||||||| |||||||||||    
T  9179974 tccgaaggattgtttaataaattg----------gattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttct 9180063  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  9180064 taggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29893075 - 29893177
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||| ||||||||    
T  29893075 tcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaataattcaaat 29893174  T
Q  101 ttc 103  Q
    |||    
T  29893175 ttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 25805686 - 25805862
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||| |||| |||||| ||| | ||||||||||||| | ||||||||| ||| |||||    ||||||||||||||||||||||||    
T  25805686 tcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaatcattcaaat 25805785  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtc 177  Q
    |||  | ||||||| ||||||||| ||| |||| |||||||||||||||| || |  ||||||| || |||||||||    
T  25805786 ttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 43679473 - 43679592
Alignment:
Q  59 atcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgta 158  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| |    
T  43679473 atcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaa 43679572  T
Q  159 attttaacaagaaaaagtct 178  Q
    |||||| || ||||||||||    
T  43679573 attttagcatgaaaaagtct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 1470438 - 1470291
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||||| |||||||||| |||||||||||| | ||||||||  | ||||||||||||||| |||||||  |||||||||||||||| |||||||    
T  1470438 tcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcattta-aaaaagtattgtggtattcaaaatcgttcaaat 1470340  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggatttt 150  Q
    || |||  |||||| ||| |||| ||||||||||| ||||||||||||||    
T  1470339 tttaaagcattgtttaatgaattagattttgatag-ttttgtgggatttt 1470291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 44623482 - 44623352
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||| ||  |||| |||  ||| |||||||||||||||| ||    
T  44623482 tcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatat 44623383  T
Q  101 ttcaaatgattgttcaataaattggattttg 131  Q
    ||| || || |||| ||||||||| ||||||    
T  44623382 ttctaaagactgtttaataaattgaattttg 44623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 727513 - 727691
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcct-gtggtattcaaaatcattcaaa 99  Q
    |||||||| | |||||||||||| |||||||||||| | ||||||||||| ||| || |||| ||| |||||   || || |||||||||||||||||||    
T  727513 tcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatcattcaaa 727612  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 188  Q
    ||||||| ||||||| |||||||           ||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  727613 tttcaaaggattgtttaataaat----------cagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

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Target: chr7; HSP #57
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 19810874 - 19810996
Alignment:
Q  82 tattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||          ||| ||||| ||||| ||||||| ||  |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttg----------tggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  182 atgaaaagatgagatttcttgagattgttttta 214  Q
    ||||||| |||||||||||||||||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31638876 - 31639015
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| | |||||||||||| |||||| |  || ||||||| ||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  31638876 tcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 31638975  T
Q  101 ttcaaatgattgttcaataaattggattttgatagatttt 140  Q
    ||| || ||||||| |||||||  ||||||||| ||||||    
T  31638976 ttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48117799 - 48117746
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  48117799 tcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 447853 - 447909
Alignment:
Q  77 tgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgat 133  Q
    ||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  447853 tgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgat 447909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7113415 - 7113502
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | |||||||| |||| |||| |||||||| |||||||  ||||||||||||    
T  7113415 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattttttatcatttaaaaaaagttttgtggtattcaa 7113502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19251491 - 19251578
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  19251491 tcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 19251578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29615012 - 29614925
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  29615012 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 29614925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 29893173 - 29893220
Alignment:
Q  195 atttcttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  29893173 atttcttgagattgtttttcttttaaaagttactatctctttcttctc 29893220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34008971 - 34009058
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  34008971 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaa 34009058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39784051 - 39784138
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  39784051 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 39784138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47879127 - 47879214
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| |||||||   ||||||||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  47879127 tcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaa 47879214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47914225 - 47914312
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| |||||||   ||||||||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  47914225 tcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaa 47914312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12893367 - 12893451
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtatt 85  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| |||||||||    
T  12893367 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatt 12893451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 973143 - 973230
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||| ||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  973143 tcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 973230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 3022902 - 3022965
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||||||  ||||||  |||||||| || |||||||||    
T  3022902 aaaaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaa 3022965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9882484 - 9882397
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||| ||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  9882484 tcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 9882397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12963653 - 12963740
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || | |||||||    
T  12963653 tcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaa 12963740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17001271 - 17001184
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  17001271 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaa 17001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18914983 - 18914896
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   ||||||||||||||||| | ||||||||||| | | ||  || |||| |||||||| ||||||||||||    
T  18914983 tcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaa 18914896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23101250 - 23101337
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| | ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  23101250 tcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 23101337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28342299 - 28342386
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| | ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  28342299 tcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 28342386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30440755 - 30440842
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| ||||| || ||||||||||||    
T  30440755 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaa 30440842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34695190 - 34695277
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| ||||||||||||||||| ||    ||||| |||||||| |||| |||||||    
T  34695190 tcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaa 34695277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37327879 - 37327966
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  37327879 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37327966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40996897 - 40996810
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||| | | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  40996897 tcaatcaagactctttccaatttaaaaaaagtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 40996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43581338 - 43581251
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||| ||||||||    
T  43581338 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaa 43581251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44343644 - 44343557
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| |||| |||||||    
T  44343644 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaa 44343557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 10616955 - 10617013
Alignment:
Q  14 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa 72  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||| ||||| ||| |||||    
T  10616955 tttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatcacttaaaaaaa 10617013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 29615029 - 29614967
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  29615029 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 29614967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 28035031 - 28034966
Alignment:
Q  23 ttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||| ||||||||||||||||||||  ||||||  |||||||| || | |||||||    
T  28035031 ttaaaaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaa 28034966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 727471 - 727558
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||| | | ||  ||||||| |||||||| |||| |||||||    
T  727471 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaa 727558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3797305 - 3797218
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||||  |||| ||||||||| |  | ||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  3797305 tcaatcaagactctttgcaatttaaaaaaagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 3797218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 10617027 - 10617134
Alignment:
Q  116 aataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-gagatttcttgagattgttttta 214  Q
    |||||||| ||||||||| ||||||||| |||||| |||||  ||||||  || || ||||||||||| |||| ||  |||||| ||| ||||| ||||     
T  10617027 aataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattgcttttc 10617126  T
Q  215 ttttaaaa 222  Q
    ||||||||    
T  10617127 ttttaaaa 10617134  T

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Target: chr7; HSP #91
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33382589 - 33382676
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || ||||||| |||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  33382589 tcaatcaagactttttgcaacttaaaaaaagccttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 33382676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34695232 - 34695319
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| |  |  ||||||| |||||||  ||||||||||||    
T  34695232 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaa 34695319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48117841 - 48117754
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||   ||||||| || |||||||||    
T  48117841 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaa 48117754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 509633 - 509695
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  509633 aaaaagtcttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaa 509695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8078396 - 8078450
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaa-agtcttgaggtattcaatcaagact 54  Q
    |||||||||| |||||||||||| ||||| | ||||| |||||||||||||||||    
T  8078396 tcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagact 8078450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 17001288 - 17001226
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  17001288 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 17001226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 23101233 - 23101295
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||| ||||    ||||| |||||||| ||||||||||||    
T  23101233 aaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaa 23101295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 28342282 - 28342344
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||| ||||    ||||| |||||||| ||||||||||||    
T  28342282 aaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaa 28342344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 34695173 - 34695235
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||| ||    ||||| |||||||| ||||||||||||    
T  34695173 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaa 34695235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 37327862 - 37327924
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  37327862 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 37327924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 39784034 - 39784096
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| || ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  39784034 aaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 39784096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43187591 - 43187545
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 47  Q
    |||||||||||||||||| |||| |||||||||||  ||||||||||    
T  43187591 tcaatcaagactctttgtaatttaaaaaaagtcttatggtattcaat 43187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 48117858 - 48117796
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  48117858 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 48117796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 7719502 - 7719421
Alignment:
Q  7 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||   |||| |||||||||||| | ||||||||||| | | ||  ||||||| |||||||| ||||||||||||    
T  7719502 aagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaa 7719421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10068418 - 10068471
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54  Q
    |||||||| ||||||||  |||| |||||||||||| |||||| ||||||||||    
T  10068418 tcaatcaaaactctttgcaatttaaaaaaagtcttgtggtatttaatcaagact 10068471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32143167 - 32143083
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtatt 85  Q
    |||||||||||||||| | |||| |||||||||||| | |||||||| ||   ||||  ||||||| |||||||| | |||||||    
T  32143167 tcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtatt 32143083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 39301283 - 39301247
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  39301283 ttttaaaaaagtctttaggtatttaatcaagactttt 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 41827290 - 41827322
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||||||||| ||||||||||||||||||||    
T  41827290 aaaaaagtcttgtggtattcaatcaagactttt 41827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 14782341 - 14782099
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  14782341 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 14782242  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782241 tttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 14782142  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14782141 tgagattgtttttattttaaaagttactatctttttcttctca 14782099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 44726016 - 44725774
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  44726016 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 44725917  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725916 tttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 44725817  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44725816 tgagattgtttttattttaaaagttactatctttttcttctca 44725774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 39467674 - 39467433
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  39467674 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 39467575  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  39467574 ttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattttt 39467475  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  39467474 tgagattgtttttcttttaaaagttactatctctttcttctc 39467433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 19718087 - 19717856
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  19718087 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 19717988  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| ||  |||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19717987 ttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttct 19717888  T
Q  201 tgagattgtttttattttaaaagttactatct 232  Q
    ||||||||||||| ||||||||||||||||||    
T  19717887 tgagattgtttttgttttaaaagttactatct 19717856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 9288663 - 9288436
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  9288663 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 9288564  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9288563 ttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 9288464  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    ||||||||||||| ||||||||||||||    
T  9288463 tgagattgtttttcttttaaaagttact 9288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 18958933 - 18958706
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  18958933 tcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 18958834  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  18958833 ttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattttt 18958734  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    ||||||||||||| ||||||||||||||    
T  18958733 tgagattgtttttgttttaaaagttact 18958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 26856066 - 26856308
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  26856066 tcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaa 26856165  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| ||  |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||| || |||||||    
T  26856166 tttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttc 26856265  T
Q  200 ttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  26856266 ttgagattgtttttcttttaaaagttactatctctttcttctc 26856308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 18306167 - 18305935
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  18306167 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 18306068  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18306067 ttcgaaagattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18305978  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||| || |||||||||||||||||| ||||||||||    
T  18305977 tgagattgttattcttttaaaagttactatctctttcttctca 18305935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 10295587 - 10295360
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  10295587 tcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 10295488  T
Q  101 ttcaaatgattgttcaataaattggattttgataga-ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    ||| || ||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10295487 ttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 10295388  T
Q  200 ttgagattg-tttttattttaaaagtta 226  Q
    ||||||||| ||||| ||||||||||||    
T  10295387 ttgagattgtttttttttttaaaagtta 10295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 32497525 - 32497744
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  32497525 tcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 32497624  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||||          |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32497625 ttcgaatgattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttct 32497714  T
Q  201 tgagattgtttttattttaaaagttactat 230  Q
    ||||||||||||| ||||||||||||||||    
T  32497715 tgagattgtttttcttttaaaagttactat 32497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 7466335 - 7466566
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||    
T  7466335 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaat 7466434  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  ||  |||||| |||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7466435 tttgaagaattgtttaataaattggatt----------ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 7466524  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| ||||||||||||| |||| |||||||||    
T  7466525 tgagattgtttttcttttaaaagttacgatctctttcttctc 7466566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 43166896 - 43166655
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| ||||||||||||||||||||||||    
T  43166896 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaat 43166797  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43166796 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttct 43166697  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    |||||||| |||| |||||||||||||||||| |||| ||||    
T  43166696 tgagattggttttcttttaaaagttactatctctttcctctc 43166655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 4403107 - 4403334
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||| || ||||||||||||| |||||| ||||||||| |||| ||||||||| ||| ||||| ||  |||||||||||||||||||||||    
T  4403107 tcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaat 4403206  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4403207 ttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttct 4403306  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    || |||||||||| ||||||||||||||    
T  4403307 tgggattgtttttcttttaaaagttact 4403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16362196 - 16362411
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||  |||||||||||||||||||||||    
T  16362196 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaat 16362295  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  16362296 ttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttct 16362385  T
Q  201 tgagattgtttttattttaaaagtta 226  Q
    ||||||||||||| ||||||||||||    
T  16362386 tgagattgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 42305991 - 42305774
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||    
T  42305991 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaat 42305892  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||| ||||||||||| ||          |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  42305891 ttcgaaggattgtttaatcaattggattttaat----------ggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttct 42305802  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    ||||||||||||| |||| |||||||||    
T  42305801 tgagattgtttttgtttttaaagttact 42305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 26374636 - 26374424
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  26374636 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 26374537  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  26374536 ttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 26374437  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  26374436 taggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 31623695 - 31623900
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  31623695 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 31623794  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||                    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  31623795 ttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttct 31623874  T
Q  201 tgagattgtttttattttaaaagtta 226  Q
    ||||||||||||| ||||||||||||    
T  31623875 tgagattgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 2705025 - 2704813
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  2705025 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 2704926  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||   |||||||| |||||||||||||||| |||||  |||||| || |||||||||||||||||||| |||||||||||    
T  2704925 ttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttct 2704826  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  2704825 taggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24502019 - 24501807
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||| |||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  24502019 tcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 24501920  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  24501919 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 24501820  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  24501819 taggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 42938323 - 42938111
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  42938323 tcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 42938224  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| |  |||||||||||||||||||| |||||||||||    
T  42938223 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttct 42938124  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  42938123 taggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 37857144 - 37857336
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattgg 125  Q
    ||||||| |||||||||||||| |||| ||||||||| ||| |||||||| ||||||||||||| |||||||||||| ||| ||||||| ||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  126 attttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 225  Q
    ||||||||          ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37857244 attttgat----------ggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtt 37857333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 5576827 - 5576614
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| |||  ||||||||||||||||||||||    
T  5576827 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaa 5576728  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| ||  |||||| ||||||   ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||    
T  5576727 tttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttc 5576628  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  5576627 ttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 10392443 - 10392246
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| |||| |||  |||||||  |||||||||| ||||||||||||    
T  10392443 tcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaat 10392344  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||||||||    
T  10392343 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagattt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 42937353 - 42937563
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||||||| |||||||||||| |||||||||||  |||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  42937353 tcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 42937450  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||| |||||||||||    
T  42937451 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttct 42937550  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  42937551 tatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 7507105 - 7506893
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||| ||| || ||||||||| | |||||||||| ||||||||||||||||| || |||| ||| ||||||||  ||||||||||||| |||||||||    
T  7507105 tcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaat 7507006  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||| ||| |||||||||||    
T  7507005 tttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttct 7506906  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  7506905 taggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 42735483 - 42735271
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||| |||||| ||||||| |||| |||||||||| |||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  42735483 tcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 42735384  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| ||  |||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| |  ||||||||||||||| |||| |||||||||||    
T  42735383 ttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttct 42735284  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  42735283 taggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 4031464 - 4031334
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||    
T  4031464 tcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaat 4031365  T
Q  101 ttcaaatgattgttcaataaattggattttg 131  Q
    ||| || ||||||| ||||||||||||||||    
T  4031364 ttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 23115374 - 23115163
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||| |||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||| ||||||||||    
T  23115374 tcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaat 23115276  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||||||||| || || ||||||  || |||||||||||||||||||| |||||||| ||    
T  23115275 ttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattcct 23115176  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  23115175 taggattgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 39190019 - 39189798
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||  |||| |||||||||||| |||||||||| || ||| || |||||||| ||||||||   || ||||||| |||||||||||    
T  39190019 tcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacatcattcaaat 39189921  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||| |||| ||| |||||||  | ||||| ||||  ||||||||||||||||| ||||||||||||| |||||||||||    
T  39189920 ttcgaaggattgtttaataaattgaattt-gatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaacatgagatttct 39189823  T
Q  201 tgagattgtttttattttaaaagtt 225  Q
    || |||||||||| |||||||||||    
T  39189822 tgggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 41479097 - 41479299
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||   ||||||||||||||||||||||    
T  41479097 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaat 41479196  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||           ||||||||||||||||| ||||  ||||||| || |||||| ||||||||||||| |||||||||||    
T  41479197 ttcgaatgattgtttaataaat----------cagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttct 41479286  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  41479287 taggattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 43959658 - 43959859
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||||| | || |||| ||  |||||| |  |||||||||||||||||||||||    
T  43959658 tcaatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaat 43959756  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||  |||||||||          ||||||||| ||| ||||||| || |||||||||||| || |||| |||||||||||    
T  43959757 ttcgaatgattgtttaataaatcagattttgat----------ggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgagatttct 43959846  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  43959847 tatgattgttttt 43959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 213
Target Start/End: Complemental strand, 4950184 - 4950010
Alignment:
Q  38 ggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagat 137  Q
    ||||||||||||| | ||||| ||||||| |||||||| || ||||||||||||||||||| ||||||| |||| || |||||||| ||||||||| ||     
T  4950184 ggtattcaatcaaaaattttcctcattta-aaaaagtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaa 4950086  T
Q  138 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    ||||||| ||||| ||||| ||||||| || |||||| | ||||||| ||| || ||||||||| | |||||||||    
T  4950085 tttgtggaattttctagtgaaattttagcatgaaaaaatatttcatgcaaacataagatttcttaaaattgttttt 4950010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32711488 - 32711358
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||| ||||    
T  32711488 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaat 32711389  T
Q  101 ttcaaatgattgttcaataaattggattttg 131  Q
    ||| || ||||||| |||||||  |||||||    
T  32711388 ttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 41069944 - 41070074
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaag-tcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||||| |  |||||||  ||||||| ||| ||||||||| ||||||| ||||| ||||| |||||  || ||||||||| |||||||||| ||    
T  41069944 tcaatcaagactttacgtcatttataaaaagttttgtggtattcaaccaagactcttcataatttaaaaaaaaatcttgtggtatttaaaatcattccaa 41070043  T
Q  100 tttcaaatgattgttcaataaattggatttt 130  Q
    |||||||||||||||  |||||||| |||||    
T  41070044 tttcaaatgattgtttgataaattgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 4031341 - 4031294
Alignment:
Q  144 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18958975 - 18958888
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| || |||||||  |||||||| || |||||||||    
T  18958975 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaa 18958888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 188
Target Start/End: Complemental strand, 13478397 - 13478269
Alignment:
Q  59 atcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgta 158  Q
    |||||||| |||||||| ||| |||||||||||| || ||||||| || ||||||| |||||||| ||||| | | |||||||| ||||||| |||   |    
T  13478397 atcattta-aaaaagtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaa 13478299  T
Q  159 attttaacaagaaaaagtctttcatgaaaa 188  Q
    |||||| || || ||||||||| |||||||    
T  13478298 attttagcatgataaagtcttttatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5576869 - 5576782
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  5576869 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 5576782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 8410526 - 8410455
Alignment:
Q  79 tggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggatttt 150  Q
    ||||||||||||||||| ||||||  || ||||||| | ||||||||| |||||| ||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14782383 - 14782296
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  14782383 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 14782296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19718129 - 19718042
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  19718129 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 19718042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32711530 - 32711443
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  32711530 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 32711443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42735525 - 42735438
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | || |||||||| |||||| | ||||||||||||    
T  42735525 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaa 42735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42938365 - 42938278
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  42938365 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaa 42938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44726058 - 44725971
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  44726058 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 44725971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9771023 - 9770934
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaa 90  Q
    |||||||||| ||||| |||||| |||||||||  |  ||||||||||||||||||| |||| ||| ||||||||  || ||||||||||    
T  9771023 tcaatcaagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagactttttatcacttaaaaaaagtctcgtagtattcaaaa 9770934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 42937330 - 42937398
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||| |||||||||||| | ||||||||||||| ||||  ||||||| |||||||| ||||||||||||    
T  42937330 atttaaaaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaa 42937398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2705067 - 2704980
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   | || |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  2705067 tcaatcaagactctttccaaattaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 2704980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7466293 - 7466380
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  7466293 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 7466380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18306209 - 18306122
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  18306209 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 18306122  T

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Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23115416 - 23115329
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||| ||| ||||||||||||    
T  23115416 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaa 23115329  T

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Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41479055 - 41479142
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||| ||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  41479055 tcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 41479142  T

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Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42306033 - 42305946
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| | ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  42306033 tcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 42305946  T

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Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 14782400 - 14782338
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  14782400 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 14782338  T

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Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 24502036 - 24501974
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| | ||||||||||||| | || |||||||| |||||||| ||||||||||||    
T  24502036 aaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaa 24501974  T

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Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 32497424 - 32497486
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| |||||||||||||||||||| |  | ||| |||||||| ||||||||||||    
T  32497424 aaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaa 32497486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 43166913 - 43166851
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  43166913 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 43166851  T

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Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 44726075 - 44726013
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  44726075 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 44726013  T

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Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 39467694 - 39467629
Alignment:
Q  23 ttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  39467694 ttaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 39467629  T

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Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 4031503 - 4031419
Alignment:
Q  4 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||| ||||  |||| |||||||||||| ||||||||||||||| | ||  ||||||  |||||||| || |||||||||    
T  4031503 atcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaa 4031419  T

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Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 9288701 - 9288618
Alignment:
Q  5 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| ||||  |||| |||||||||||| | ||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  9288701 tcaagactttttgcaatttaaaaaaagtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 9288618  T

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Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16362154 - 16362241
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||| | || |||||| ||||| | ||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  16362154 tcaatcaagactttttgtaacttaaaaaaaatcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 16362241  T

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Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31623653 - 31623740
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||| | || ||||||||||   ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  31623653 tcaatcaagactttttgtaacttaaaaaaagtctcttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 31623740  T

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Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 4031523 - 4031461
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||| ||||||||||||    ||||| |||||||| ||||||||||||    
T  4031523 aaaaagtcttgtggtattcgatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 4031461  T

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Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 7466276 - 7466338
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  7466276 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 7466338  T

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Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 18306226 - 18306164
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  18306226 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 18306164  T

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Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 18958992 - 18958930
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||  |||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  18958992 aaaaagtcttgtagtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 18958930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 19718146 - 19718084
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| || ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  19718146 aaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 19718084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 39467732 - 39467671
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| |||||||||||||||||||| |  | ||| |||||||| ||||||||||||    
T  39467732 aaaaagtcttgtggtattcaatcaagactttttacaactta-aaaaagtcttgtggtattcaa 39467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 4302846 - 4302813
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagact 54  Q
    ||||||||||||||| ||||||||||||||||||    
T  4302846 ttttaaaaaagtctttaggtattcaatcaagact 4302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 13478475 - 13478408
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa 72  Q
    |||||||| |||||||||||| |||||||||||| | | |||||| ||||||||| |||||||| |||||    
T  13478475 aatcaaga-tctttgtcattt-aaaaaagtcttgtgttgttcaattaagactttttatcatttaaaaaaa 13478408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  82 tattcaaaatcattcaaatttcaaatgattgttcaataaattggatttt 130  Q
    |||||||||| ||||||||||||||  ||| || |||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26374676 - 26374591
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| ||||||||  || | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  26374676 tcaatcaagactctttccaatttaaaaaaagt--tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 26374591  T

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Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 32497465 - 32497497
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||||||||| ||||||||||||||||||||    
T  32497465 aaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 37567401 - 37567365
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  37567401 ttttaaaaaagtctttaggtattcaattaagactttt 37567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 41069941 - 41069989
Alignment:
Q  40 tattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||| | ||||||| |||||||  ||||||||||||    
T  41069941 tattcaatcaagactttacgtcatttataaaaagttttgtggtattcaa 41069989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 113)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 36674337 - 36674095
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  36674337 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 36674238  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674237 tttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 36674138  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36674137 tgagattgtttttattttaaaagttactatctttttcttctca 36674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 34484237 - 34483995
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  34484237 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaat 34484138  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34484137 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 34484038  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    ||||||||||||| |||||||||||||||||| ||||||||||    
T  34484037 tgagattgtttttgttttaaaagttactatctctttcttctca 34483995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 17946287 - 17946528
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  ||| |||||||||||||||||||    
T  17946287 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaat 17946386  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17946387 ttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 17946486  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  17946487 tgagattgtttttcttttaaaagttactatctatttcttctc 17946528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 44906720 - 44906479
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  44906720 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 44906621  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44906620 ttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttct 44906521  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  44906520 tgagattgtttttcttttaaaagttactatctctttcttctc 44906479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 32580179 - 32580415
Alignment:
Q  4 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttc 103  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  32580179 atcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttc 32580277  T
Q  104 aaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 203  Q
     || ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32580278 gaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 32580377  T
Q  204 gattgtttttattttaaaagttactatctttttcttct 241  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  32580378 gattgtttttattttaaaaattactatctttttcttct 32580415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 11431525 - 11431750
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  11431525 tcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaat 11431624  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11431625 ttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 11431724  T
Q  201 tgagattgtttttattttaaaagtta 226  Q
    ||||||||||||||||||||||||||    
T  11431725 tgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 26107260 - 26107501
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  26107260 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaat 26107359  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  26107360 ttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttct 26107459  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||| ||| |||||||||    
T  26107460 tgagattgtttttcttttaaaagttactttctctttcttctc 26107501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 54628842 - 54629085
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaag-tcctgtggtattcaaaatcattcaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||  || |||||||||||||||||||||||    
T  54628842 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaa 54628941  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  54628942 tttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttc 54629041  T
Q  200 ttgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||    
T  54629042 ttgagattgtttttcttttgaaagttactatctctttcttctca 54629085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 48379156 - 48379397
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  48379156 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 48379255  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  48379256 ttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttct 48379355  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| ||||||| |||||||||| |||||||||    
T  48379356 tgagattgtttttcttttaaatgttactatctctttcttctc 48379397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 52810377 - 52810614
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  52810377 tcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 52810476  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  |||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  52810477 tttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 52810576  T
Q  201 tgagattgtttttattttaaaagttactatctttttct 238  Q
    ||||||||||||| |||||||||  ||||||| |||||    
T  52810577 tgagattgtttttcttttaaaagaaactatctctttct 52810614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 52618172 - 52617937
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  52618172 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 52618073  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||    
T  52618072 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------aagtctttcataaaaagatgagatttct 52617979  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  52617978 tgagattgtttttcttttaaaagttactatctctttcttctc 52617937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 31646491 - 31646251
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  31646491 tcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaat 31646392  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  31646391 ttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgagatttct 31646294  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||| || ||||||||||||||| || ||||||||||    
T  31646293 tgagattgttattcttttaaaagttactacctctttcttctca 31646251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 18749611 - 18749848
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||| ||  ||| |||||||||||||||||||||||||| || ||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  18749611 tcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 18749710  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749711 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18749810  T
Q  201 tgagattgtttttattttaaaagttactatctttttct 238  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  18749811 tgagattgtttttcttttaaaagttactatctctttct 18749848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 40897147 - 40897375
Alignment:
Q  5 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||||||||     
T  40897147 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcg 40897246  T
Q  105 aatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 204  Q
    || ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40897247 aaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgat 40897346  T
Q  205 attgtttttatttt-aaaagttactatct 232  Q
    ||||||||| ||||  |||||||||||||    
T  40897347 attgtttttcttttgtaaagttactatct 40897375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 51737934 - 51737693
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  51737934 tcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaa 51737835  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||  |||    
T  51737834 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaagataagtattc 51737735  T
Q  200 ttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||||  ||||||||||| ||||| |||||||||    
T  51737734 ttgagattgttttt-ctttaaaagttattatctctttcttctc 51737693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 10728848 - 10728629
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||    
T  10728848 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaat 10728749  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10728748 ttggaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 10728659  T
Q  201 tgagattgtttttattttaaaagttactat 230  Q
    ||||||||||||| ||||||||||||||||    
T  10728658 tgagattgtttttcttttaaaagttactat 10728629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 37454860 - 37455075
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  37454860 tcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 37454959  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||||           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37454960 ttcgaatgattgtttaataaattg----------aattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttct 37455049  T
Q  201 tgagattgtttttattttaaaagtta 226  Q
    ||||||||||||| ||||||||||||    
T  37455050 tgagattgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 50762257 - 50762038
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||| |||||||||||||||||||| |||    
T  50762257 tcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaat 50762158  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| ||||||||||  |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50762157 ttcgaatgattgtttgataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 50762068  T
Q  201 tgagattgtttttattttaaaagttactat 230  Q
    ||||||||||||| ||||||||||||||||    
T  50762067 tgagattgtttttcttttaaaagttactat 50762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 50903450 - 50903233
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa---gtcctgtggtattcaaaatcattca 97  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||   ||| |||||||||||||||||||||    
T  50903450 tcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattca 50903351  T
Q  98 aatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 197  Q
    ||||   || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  50903350 aattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatt 50903251  T
Q  198 tcttgagattgtttttat 215  Q
    ||||||||||||||||||    
T  50903250 tcttgagattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 39038039 - 39038260
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||    
T  39038039 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaat 39038138  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| ||  |||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39038139 ttcgaagaattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttct 39038228  T
Q  201 tgagattgtttttattttaaaagttactatct 232  Q
    ||| ||||||||| ||||||||||||||||||    
T  39038229 tgaaattgtttttcttttaaaagttactatct 39038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 197
Target Start/End: Original strand, 20832993 - 20833187
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||     
T  20832993 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattc 20833092  T
Q  103 caaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 197  Q
      || ||||||| |||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||| |||||||||||||| |||||    
T  20833093 ggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 10660534 - 10660752
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  10660534 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaat 10660633  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          ||||||||||||||||||||||||              |||||||||||||||||||    
T  10660634 ttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaaca--------------atgaaaagatgagatttct 10660709  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  10660710 tgagattgtttttattttaaaagttactatttttttcttctca 10660752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 23753593 - 23753377
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  23753593 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 23753494  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||                    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23753493 ttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttct 23753415  T
Q  201 tgagattgtttttattttaaaagttactatctttttct 238  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  23753414 tgagattgtttttgttttaaaagttactatctctttct 23753377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 6035260 - 6035039
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||  ||| |||||||||||||||||||    
T  6035260 tcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaat 6035161  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| ||  | |||| |||||||| ||||||||| |||||||||||||||| ||||  ||||||| || ||||||||||||||| |||| |||||||||||    
T  6035160 ttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttct 6035061  T
Q  201 tgagattgtttttattttaaaa 222  Q
    | ||||||||||| ||||||||    
T  6035060 taagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 19253826 - 19254038
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  19253826 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 19253925  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  19253926 ttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 19254025  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  19254026 taggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 20498208 - 20498420
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  20498208 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 20498307  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  20498308 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 20498407  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  20498408 taggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 996293 - 996081
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||| |||||| |||||||||||| ||||||||||||||| | || |||| ||| ||||||||  |||||||||||||||||||||||    
T  996293 tcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 996194  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  996193 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 996094  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  996093 taggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 10139353 - 10139141
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || || |||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  10139353 tcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 10139254  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  10139253 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 10139154  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  10139153 taggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 3999852 - 3999640
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| ||  |||||||||||||||||||||||    
T  3999852 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaat 3999753  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| |||||||  | ||||||||||||||| |||| |||||||||||    
T  3999752 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttct 3999653  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  3999652 taggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 6589563 - 6589775
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| | || ||||||||| |||||||||||| ||||||||||||||||| || |||||||| ||||||||  |||||||||||||||||||||||    
T  6589563 tcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaat 6589662  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| ||  ||| || |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  6589663 ttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 6589762  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  6589763 taggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 37820684 - 37820472
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || |||| ||| ||||||||  |||||||||||||||||||||||    
T  37820684 tcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 37820585  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| ||||||||||||||||  |||| ||||||| || ||||||||||||||| |||| |||||||||||    
T  37820584 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 37820485  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  37820484 taagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 213
Target Start/End: Complemental strand, 3206387 - 3206200
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattgg 125  Q
    ||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||||| || ||||||| |||||||  |    
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3206288  T
Q  126 attttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  3206287 attttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 33808006 - 33807796
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    ||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| |||  ||||||||||||||||||||||    
T  33808006 tcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaa 33807907  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  33807906 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 33807807  T
Q  200 ttgagattgtt 210  Q
    ||  |||||||    
T  33807806 ttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 25418365 - 25418577
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||| ||||| ||  | |||||||||||||||||||||    
T  25418365 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaat 25418464  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    || ||| ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||  || |||||||| ||||||||||| |||||||| ||    
T  25418465 ttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattcct 25418564  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  25418565 taggattgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 33996748 - 33996548
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| ||| |||||||||||||||||||||||    
T  33996748 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaat 33996649  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| ||||||| |||||||| ||||| ||||||| || |||||||||||| || |||| |||||||||||    
T  33996648 ttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttct 33996549  T
Q  201 t 201  Q
    |    
T  33996548 t 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 40246843 - 40247055
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  40246843 tcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaat 40246942  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||  || |||||||||||||||||||| |||||||| ||    
T  40246943 ttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcct 40247042  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  40247043 tatgattgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 44762244 - 44762032
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||| ||  |||||||||||||||| || |||| ||| ||||||||  |||||||| ||||| |||||| |    
T  44762244 tcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagt 44762145  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| |||||||||||    
T  44762144 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttct 44762045  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  44762044 taagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 35337734 - 35337930
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||  ||||||||    
T  35337734 tcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaat 35337833  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||    
T  35337834 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 29449065 - 29448853
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || |||||||||  ||||||||||| | ||||||||||||||| |  |||| ||| ||||||||  |||||||||||||||||||||||    
T  29449065 tcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 29448966  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||  ||||||| ||  ||||||||||||||||||| |||||||||||    
T  29448965 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttct 29448866  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  29448865 taggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 53929335 - 53929123
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||| ||||    
T  53929335 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaat 53929236  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
     || || ||||||| |||||||  ||||||||| |||||||| ||||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||| |    
T  53929235 atcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttt 53929136  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  53929135 taggattgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 54625591 - 54625803
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| | || ||||||||| |||||| |||||  |||||||||||||||| || |||| ||| ||||||||  |||||||||||||| ||||||||    
T  54625591 tcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaat 54625690  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||||    
T  54625691 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttct 54625790  T
Q  201 tgagattgttttt 213  Q
    | |||||| ||||    
T  54625791 taagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 44276388 - 44276598
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||   ||||||||||||||||||||||    
T  44276388 tcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaat 44276487  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |    | ||||||| |||||||||          |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| | ||||||||| |    
T  44276488 t----aggattgtttaataaattg----------gattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttt 44276573  T
Q  201 tgagattgtttttattttaaaagtt 225  Q
    || |||| ||||| |||||||||||    
T  44276574 tgggattatttttcttttaaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 44 - 242
Target Start/End: Complemental strand, 39842648 - 39842460
Alignment:
Q  44 caatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtg 143  Q
    ||||||||| ||||||||| ||| ||||||||  ||| |||||||||||||||||||||| ||  |||||| |||||||| ||||||||               
T  39842648 caatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgac---------- 39842559  T
Q  144 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||||    
T  39842558 ggattttgtaatgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattgtttttcttttaaaagttaccatctctttcttctc 39842460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 5825065 - 5825273
Alignment:
Q  7 aagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttca 104  Q
    ||||||||||||||||| ||||||   ||  | ||||||||||||| ||||||  ||||||| |||||||    ||||||||||||||||||||||||      
T  5825065 aagactctttgtcatttaaaaaaacaattatgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaatcattcaaattttg 5825164  T
Q  105 aatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 204  Q
    || ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| || || ||||||| |||||||||||| ||||||||||||  |    
T  5825165 aaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggctttcatgaaaacatgagatttcttatg 5825264  T
Q  205 attgttttt 213  Q
    |||||||||    
T  5825265 attgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 52114527 - 52114728
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||| ||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||| ||||| |||  |||||||||||||| |||||||    
T  52114527 tcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaa 52114626  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    ||||  | ||||||| |||||||  |||||||||||||||||||| ||||| ||||  ||||||| || |||||| |||||  |||||| ||||||||||    
T  52114627 tttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttc 52114726  T
Q  200 tt 201  Q
    ||    
T  52114727 tt 52114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29030005 - 29030203
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| |||||||| ||||||||||||||||||||||||    
T  29030005 tcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactta-aaaaagtcttgtggtattcaaaatcattcaaat 29030103  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||| ||||| || || |||||||||| |||    | ||| ||||||| |||||||||||    
T  29030104 tttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 238
Target Start/End: Complemental strand, 15493061 - 15492836
Alignment:
Q  7 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||   ||||||||||||||||||||||||  ||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactta-aaaatgtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  107 t----gattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 202  Q
    |     ||| || |||||||||          |||||||| |||| || ||||| ||||||||||||||||| |||||||||||   || ||||||||||    
T  15492962 ttaagaattatttaataaattg----------gattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttg 15492873  T
Q  203 agattgtttttattttaaaag-ttactatctttttct 238  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  15492872 agattgtttttattttaaaagtttactatctatttct 15492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 51699686 - 51699495
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || |||| ||| ||||| ||  |||||||||||||||||||||||    
T  51699686 tcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaat 51699588  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 193  Q
    ||| || ||||| | |||||||  |||||||||  ||||||||||||||| ||||| ||||||| || |||||| |||||| |||||| ||||    
T  51699587 ttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 539586 - 539479
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattgg 125  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| || |||| || ||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  126 attttgat 133  Q
    ||||||||    
T  539486 attttgat 539479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6975748 - 6975847
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  6975748 tcaatcaagactctttgttattttaaaa-agtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaatcattcaaat 6975844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 1440160 - 1440010
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| |||||| || ||| ||||||||||||||||| || |||| ||| ||||||||  ||||||||||||||||||||||    
T  1440160 tcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 1440061  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggatttt 150  Q
    |||| || ||||||| |||||||  ||||||||| |||||| |||||||||    
T  1440060 tttccaaggattgtttaataaatcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  144 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12103628 - 12103729
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||   ||||||||||||||||||||||    
T  12103628 tcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaat 12103727  T
Q  101 tt 102  Q
    ||    
T  12103728 tt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 22057760 - 22057933
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagt-cttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| ||||||   |||| ||||||| ||||||||| || |||| ||| ||||| ||  |||||||| |||||||||||||    
T  22057760 tcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaatcattcaaa 22057859  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaa 173  Q
    |||| |  ||||||| |||||||  ||||||||| |||||||||||||||| ||||| |||||||||| |||||    
T  22057860 tttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 55235198 - 55235347
Alignment:
Q  15 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgtt 114  Q
    |||||||||||||||||||  ||||||||||||||| ||| ||||||| ||| ||||||||   || |||||||||||||||||||||| || |||||||    
T  55235198 ttgtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaatta-aaaaagtctcatgatattcaaaatcattcaaatttcgaaagattgtt 55235296  T
Q  115 caataaattggattttgataga-ttttgtgggattttgtagtgtaatttta 164  Q
     |||||||||| ||||||| || |||||||||||||| || || |||||||    
T  55235297 taataaattggtttttgatggatttttgtgggattttctaatgaaatttta 55235347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 27899367 - 27899545
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattg 124  Q
    ||||||||| |  ||||||||||||||||| ||  ||||||| ||||||||  |||||||||||||||||||||||||| || ||||||| |||||||      
T  27899367 aaaaaagtcatatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaat-- 27899464  T
Q  125 gattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
             ||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||  ||||||||||    
T  27899465 --------cagattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattgttttt 27899545  T

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Target: chr3; HSP #57
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18749569 - 18749656
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||||| || |||||||||    
T  18749569 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaa 18749656  T

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Target: chr3; HSP #58
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 6131316 - 6131228
Alignment:
Q  125 gattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

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Target: chr3; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 1439994 - 1439889
Alignment:
Q  108 gattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 207  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||||  ||||||   | |||||||||||||| ||||| ||||||||| ||  ||||    
T  1439994 gattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagattttttaggatt 1439895  T
Q  208 gttttt 213  Q
    ||||||    
T  1439894 gttttt 1439889  T

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Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10139395 - 10139308
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| |  | |||||||| |||||||| ||||||||||||    
T  10139395 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaa 10139308  T

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Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10660492 - 10660579
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  10660492 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 10660579  T

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Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19253784 - 19253871
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  19253784 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 19253871  T

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Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36674379 - 36674292
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  36674379 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 36674292  T

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Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 3999893 - 3999807
Alignment:
Q  2 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||| | |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  3999893 caatcaagactttttctaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 3999807  T

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Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27240450 - 27240408
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 43  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  27240450 tcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

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Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6131378 - 6131325
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54  Q
    ||||||||||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  6131378 tcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagact 6131325  T

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Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 23535977 - 23535917
Alignment:
Q  41 attcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    |||||||||| ||| ||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  23535977 attcaatcaa-actcttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 23535917  T

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Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 996334 - 996248
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||  || || |||||||||||| | ||||||||||||| | || |||||||  |||||||| ||||||||||||    
T  996334 tcaatcaagactctttc-caattaaaaaaagtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaa 996248  T

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Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11431483 - 11431570
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| |||||||||| |||||| ||  ||||||  |||||||| || |||||||||    
T  11431483 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaa 11431570  T

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Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18749527 - 18749614
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  18749527 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 18749614  T

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Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20498166 - 20498253
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||| ||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  20498166 tcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 20498253  T

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Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23753635 - 23753548
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||| | ||  ||||||  |||||||| || |||||||||    
T  23753635 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 23753548  T

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Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37820726 - 37820639
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| ||||| || ||||||||||||    
T  37820726 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaa 37820639  T

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Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44276304 - 44276391
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| ||| ||||| |||| ||||||||| || |||||||||| |||||| ||  | ||||| |||||||| ||||||||||||    
T  44276304 tcaatcaaaactttttgtaatttaaaaaaagtcatgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaa 44276391  T

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Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44276346 - 44276433
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||| |||||||||||| |||| |||||||||||| |||||||||| || ||| ||  ||||||  |||||||| || |||||||||    
T  44276346 tcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaa 44276433  T

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Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44762286 - 44762199
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||| ||||||||    
T  44762286 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaa 44762199  T

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Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44906762 - 44906675
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  44906762 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 44906675  T

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Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 54628800 - 54628887
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  54628800 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 54628887  T

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Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 10660475 - 10660537
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  10660475 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 10660537  T

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Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 11431466 - 11431528
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  11431466 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 11431528  T

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Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 23753652 - 23753590
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  23753652 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 23753590  T

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Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 36674396 - 36674334
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  36674396 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 36674334  T

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Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27899385 - 27899430
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 46  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||    
T  27899385 tcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25418323 - 25418410
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaa-aagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| |||||||  |||||||||| |||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  25418323 tcaatcaaaactctttc-cattttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 25418410  T

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Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 33807730 - 33807678
Alignment:
Q  158 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 210  Q
    ||||||| || |||||||||||||||||||| ||||||||||||  |||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

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Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 34484260 - 34484192
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  34484260 atttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 34484192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 51737952 - 51737888
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatca-tttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||| || |||| |||| |||||||| || |||||||||    
T  51737952 aaaaaagtcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaa 51737888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3206445 - 3206394
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 52  Q
    ||||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  3206445 tcaatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaaga 3206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6131420 - 6131333
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||  | ||||||||| |||||||| ||| | |||||||||||||||  |  ||||||| |||||||  ||||||||||||    
T  6131420 tcaatcaagatccattgtcatttaaaaaaagttttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaa 6131333  T

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Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6589521 - 6589608
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||| |||||||||| | |||| |||||||||||| | ||||||||||| | |  |  ||||||| |||||||| ||||||||||||    
T  6589521 tcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaa 6589608  T

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Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 6975712 - 6975759
Alignment:
Q  7 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54  Q
    |||||||||||| | || |||||||||||| |||||||||||||||||    
T  6975712 aagactctttgtaacttaaaaaaagtcttgtggtattcaatcaagact 6975759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29029963 - 29030050
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||| || | |||   ||||||||||| | |||||||| |||||| ||  ||||||| |||||||| ||||||||||||    
T  29029963 tcaatcaagactcattctaattaagaaaaagtcttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaa 29030050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35337692 - 35337779
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| |  |  ||||||  |||||||| ||||||||||||    
T  35337692 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaa 35337779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40246801 - 40246888
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| |  ||| |||||| ||||| | ||||||||||||| | ||  ||||||| |||||||  ||||||||||||    
T  40246801 tcaatcaagactctttctggtttaaaaaaaatcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaa 40246888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50762299 - 50762212
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || | |||||||    
T  50762299 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaa 50762212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50903492 - 50903405
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| |  |||||||||    
T  50903492 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaa 50903405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51699728 - 51699641
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| ||||||||||||   ||||||||||||| | ||  ||||||| ||||| || ||||||||||||    
T  51699728 tcaatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaa 51699641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 3206462 - 3206400
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||| ||    ||||| |||||||| ||||||||||||    
T  3206462 aaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtggtattcaa 3206400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 10728865 - 10728803
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  10728865 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 10728803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 18749510 - 18749572
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  18749510 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 18749572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 27240509 - 27240447
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  27240509 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 27240447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 44906779 - 44906717
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  44906779 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 44906717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 50903509 - 50903447
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  50903509 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 50903447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 10216196 - 10216163
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||| ||||||||||||||||||||    
T  10216196 taaaaaagtcttgtggtattcaatcaagactttt 10216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 10225704 - 10225671
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||| ||||||||||||||||||||    
T  10225704 taaaaaagtcttgtggtattcaatcaagactttt 10225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 12103733 - 12103774
Alignment:
Q  145 gattttgtagtgtaattttaacaagaaaaagtctttcatgaa 186  Q
    |||||| ||||| |||||||||||||| ||||||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27240492 - 27240439
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54  Q
    |||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  27240492 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 27240439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 52080003 - 52080056
Alignment:
Q  78 gtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttg 131  Q
    |||||||||||||||||||||||||  || ||||||| |||||||  |||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttg 52080056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1440201 - 1440114
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-agaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||| ||| ||||||||||||||| | ||||||||||||| | ||  |||||| | |||||||  ||||||||||||    
T  1440201 tcaatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaa 1440114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 33808029 - 33807961
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||| |||||||||||| | |||||||| |||| | ||  ||||||| |||||||| ||||||||||||    
T  33808029 atttaaaaaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaa 33807961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 39338335 - 39338299
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  39338335 ttttaaaaaagtctttaggtattcaataaagactttt 39338299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 6312567 - 6312809
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  6312567 tcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 6312666  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312667 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 6312766  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6312767 tgagattgtttttattttaaaagttactatctttttcttctca 6312809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 25612150 - 25612392
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  25612150 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 25612249  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25612250 ttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttct 25612349  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25612350 tgagattgtttttattttaaaagttactatctttttcttctca 25612392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 51701573 - 51701815
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  51701573 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 51701672  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  51701673 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttt 51701772  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51701773 tgagattgtttttattttaaaagttactatctttttcttctca 51701815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 29396595 - 29396358
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  29396595 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 29396496  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396495 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 29396396  T
Q  201 tgagattgtttttattttaaaagttactatctttttct 238  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  29396395 tgagattgtttttgttttaaaagttactatctctttct 29396358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9322707 - 9322466
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9322707 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaat 9322608  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9322607 ttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 9322508  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  9322507 tgagattgtttttattttaaaatttactatctttttcttctc 9322466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 15835260 - 15835023
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||    
T  15835260 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaat 15835161  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    | |||| ||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15835160 tgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 15835061  T
Q  201 tgagattgtttttattttaaaagttactatctttttct 238  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  15835060 tgagattgtttttgttttaaaagttactatctctttct 15835023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 48177669 - 48177442
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  48177669 tcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 48177570  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48177569 ttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 48177470  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    ||||||||||||| ||||||||| ||||    
T  48177469 tgagattgtttttcttttaaaagatact 48177442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 28387600 - 28387359
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||| ||||||||||    
T  28387600 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaat 28387501  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  28387500 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttct 28387401  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  28387400 tgagattgtttttgttttaaaagttattatctctttcttctc 28387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 46328035 - 46328276
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||    
T  46328035 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaat 46328134  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  46328135 ttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
     || ||||||||| |||||||||||||||||| |||||||||    
T  46328235 cgaaattgtttttcttttaaaagttactatctctttcttctc 46328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 38536296 - 38536065
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||  ||||||| ||||||||||||||| ||||||||    
T  38536296 tcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaat 38536197  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38536196 ttcaaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 38536107  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| ||||||||||||| |||| | |||||||    
T  38536106 tgagattgtttttcttttaaaagttacaatctctctcttctc 38536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 38558514 - 38558283
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||  ||||||| ||||||||||||||| ||||||||    
T  38558514 tcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaat 38558415  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38558414 ttcaaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 38558325  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| ||||||||||||| |||| | |||||||    
T  38558324 tgagattgtttttcttttaaaagttacaatctctctcttctc 38558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 18798484 - 18798691
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  18798484 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 18798583  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18798584 ttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
     |||||||||||| ||||||||||||||    
T  18798664 agagattgtttttgttttaaaagttact 18798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 29219281 - 29219493
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  29219281 tcaatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 29219378  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |   || ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29219379 taagaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttct 29219468  T
Q  201 tgagattgtttttattttaaaagtt 225  Q
    ||||||||||||| |||||||||||    
T  29219469 tgagattgtttttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 9577639 - 9577418
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||| |||||| |||| ||| |||||||| |||| |||||||||||||||||||    
T  9577639 tcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaat 9577540  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||||||||||||| ||||||||| |||||| ||||| |||||||  | |||||| ||||||||||||| |||||||||||    
T  9577539 ttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttct 9577440  T
Q  201 tgagattgtttttattttaaaa 222  Q
    || |||||||||| ||||||||    
T  9577439 tgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 5495303 - 5495117
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||| ||||    
T  5495303 tcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaat 5495204  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 197  Q
    |||||| |||| || ||||||||||||          |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5495203 ttcaaaggattatttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 21222140 - 21222349
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  | |||||||||||||||||||||    
T  21222140 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaat 21222239  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  21222240 ttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 21222339  T
Q  201 tgagattgtt 210  Q
    |  |||||||    
T  21222340 taggattgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 48668979 - 48668770
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    ||||||||| ||| ||||||||  |||||||||||||| ||||||||    
T  48668979 tcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaattattcaaat 48668883  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||          ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48668882 ttcgaaagattgtttaataaattggat----------tttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgt 48668793  T
Q  201 tgagattgtttttattttaaaag 223  Q
    || |||||||||| |||||||||    
T  48668792 tgggattgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 19452015 - 19451803
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| |||||| |||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  19452015 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 19451916  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||| ||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  19451915 ttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 19451816  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  19451815 tatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 35279665 - 35279865
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||| ||||    
T  35279665 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaat 35279764  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||| |||| |||||||||||||||||||| |||||||||||    
T  35279765 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttct 35279864  T
Q  201 t 201  Q
    |    
T  35279865 t 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 45272580 - 45272809
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||  |||||||||||||| ||| ||||    
T  45272580 tcaatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaat 45272678  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||| ||| ||||||||||||||||          || |||||||||||||||||||||||||||||| ||||| || |||||||||||||| |    
T  45272679 ttcgaaggat-gtttaataaattggattttg----------tgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttt 45272767  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  45272768 tgagattgtttttcttttaaaagttattatctgtttcttctc 45272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 35679335 - 35679125
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||| |||||  |||||||||||||||| || |||| ||| |||||||| ||||||||||||||||||||||||    
T  35679335 tcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaat 35679236  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||  ||||||||| ||||| ||||||| || |||||||||||||||||| | |||||||||||    
T  35679235 ttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttct 35679136  T
Q  201 tgagattgttt 211  Q
    | |||||||||    
T  35679135 taagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 50192758 - 50192545
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||||||||| || |||| ||| ||||| |||  ||||||||||||||||||||||    
T  50192758 tcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaa 50192659  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||  || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||     
T  50192658 ttttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttt 50192559  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  50192558 ttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 28824579 - 28824368
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||| |||| ||||||||||||||||||||||||    
T  28824579 tcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaat 28824480  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||| | |||||||||| |||||||||||| || |||| |||||||||||    
T  28824479 ttcgaa-gattgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttct 28824381  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  28824380 taggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 47780704 - 47780916
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | | |||||||| ||||||||| || ||||||||||||||||| || |||| ||| ||||||||  ||| ||||||||||||||||||     
T  47780704 tcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaa 47780803  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    || ||| ||||||| |||||||  ||||||||| |||||||||||||||| ||||| |||||||||| |||||||| ||||||||||| |||||||||||    
T  47780804 ttaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttct 47780903  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  47780904 taagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 49198475 - 49198264
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||| ||| |||||||||| |||||| || |||| ||| ||||||| | |||||||||||||||||||||||    
T  49198475 tcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatcattcaaat 49198377  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||    
T  49198376 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttct 49198277  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  49198276 taggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 6304460 - 6304247
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||| ||| | || || |||| ||| ||||||||  ||||||||||||||||||||||    
T  6304460 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 6304361  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||    
T  6304360 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttc 6304261  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  6304260 ttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 37014847 - 37014635
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||||||||||||||||  || |||||||| ||||||||||||| | | ||||||| ||| |||||||| |||| |||||||||||||||||||    
T  37014847 tcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaat 37014748  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || |||||||  |||||||| |||||||| |||||||| ||||||| ||||| ||||||| || |||||||||| |||| |||| |||||||||||    
T  37014747 ttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttct 37014648  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  37014647 taagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 45760217 - 45760004
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| ||||||||| ||||||||| ||| || ||||||||||||||||| || |||| ||| ||||||||  ||||||||||||||||||||||    
T  45760217 tcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 45760118  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
     ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||| ||| ||||||| ||||||||||    
T  45760117 cttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttc 45760018  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  45760017 ttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 49230879 - 49231008
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  49230879 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 49230978  T
Q  101 ttcaaatgattgttcaataaattggatttt 130  Q
    ||| || |||| || |||||||||||||||    
T  49230979 ttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 49418077 - 49418277
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || ||||||||| |||||| |  || |||||||||| |||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  49418077 tcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 49418176  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| |||||||  ||||||||| |||||||||||||||| || || ||||||| || |||||| ||||||||||||| |||||||||||    
T  49418177 ttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttct 49418276  T
Q  201 t 201  Q
    |    
T  49418277 t 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 45535937 - 45536124
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| | |||||||||||| || ||||| ||| ||||||||||||||||| || |||  ||| ||||||||  |||||||||||||||||||||||    
T  45535937 tcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaat 45536036  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 188  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  45536037 ttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 32589160 - 32588963
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||| |||||  | || | ||||| || |||||||||||||| ||||||| ||| || ||||| ||||||||||||||||||||||||    
T  32589160 tcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaat 32589061  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    ||  || ||||||| ||||||| |||||||||| ||||||||| |||||| ||||| ||||||| ||  ||||||||||||||||||| |||||||||    
T  32589060 tttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 47654559 - 47654346
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| ||| |||||||| ||||||||||||| ||| || |||| ||| ||||| |||  |||||||||||||| |||||||    
T  47654559 tcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaa 47654460  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| |||||||  ||||||||| |||||||||| ||||| ||| | ||||||| || |||||||| ||||||||||| ||||||||||    
T  47654459 tttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttc 47654360  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  47654359 ttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 29556097 - 29556310
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||| || |||| |||| |||||||||||| | ||||||||||||||| || |||| ||| ||||| ||  ||| |||||||||||||||||||    
T  29556097 tcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaat 29556196  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa-agatgagatttc 199  Q
    ||| || ||||||| |||||||| ||||||||| |||||| ||||||||| || || ||||||| |  |||||||||||| |||||| | ||||||||||    
T  29556197 ttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttc 29556296  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  29556297 ttaggattgttttt 29556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 48524312 - 48524490
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||||||| |||||| || || |||||| |||||| ||| || |||| ||| |||||||| |||| |||||||||||||||||||    
T  48524312 tcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaat 48524411  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 179  Q
    ||  || ||||||| |||||||  | ||||||| |||||||||||||||| ||||| |||||||||| |||||||||||    
T  48524412 tttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 730141 - 730314
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| |||  ||||||||||||||||||||||    
T  730141 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaa 730240  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaa 173  Q
    |||| |   |||||| |||||||  ||||||||| ||||||||| |||||| ||||| ||||||| || |||||    
T  730241 tttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8141335 - 8141243
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatca 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| || ||||||||||||||    
T  8141335 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattcaaaatca 8141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 31572328 - 31572204
Alignment:
Q  77 tgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagt 176  Q
    ||||||||||||||||||| ||||||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| |||||||  | ||||||||    
T  31572328 tgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagt 31572229  T
Q  177 ctttcatgaaaagatgagatttctt 201  Q
    |||||||||||  ||||||||||||    
T  31572228 ctttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 47784380 - 47784518
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||| |||||||| ||||||||||||||| |||||||     
T  47784380 tcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcattta-aaaaagtcttgtggtattcaaaattattcaaac 47784478  T
Q  101 ttcaaatgattgttcaataaattggattttgatagatttt 140  Q
    ||| || ||||||| ||||||||||||||||  |||||||    
T  47784479 ttctaaagattgtttaataaattggattttgtgagatttt 47784518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 33025505 - 33025696
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||| |||||| ||||| ||||| ||||||||||||| | || || |||| ||| |||||||| |||||||||||||||||||||||    
T  33025505 tcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattcaaa 33025604  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||  || ||||||| |||| ||           ||||||||||||||||| || |  ||||||| || |||||||||||||||||||| ||||||||||    
T  33025605 ttttgaaggattgtttaatacat----------cagattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 33025694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22183363 - 22183457
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcatt 95  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || |||| ||| ||||||||  ||||||||||||||||||    
T  22183363 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 31622626 - 31622527
Alignment:
Q  40 tattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattt 139  Q
    |||| |||||||||| ||||||| ||| |||||||  ||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||||  ||||||    
T  31622626 tattaaatcaagactcttcatcactta-aaaaagtattgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttgtgagattt 31622528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 51085837 - 51085952
Alignment:
Q  50 agacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattt 149  Q
    ||||| ||||||||||| || |||||  |||||||||||||| ||||||||||  || |||| || ||||||||||||||||||  ||||||||| ||||    
T  51085837 agactattcatcatttaaaagaagtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattt 51085936  T
Q  150 tgtagtgtaattttaa 165  Q
    | | ||| ||||||||    
T  51085937 tcttgtgaaattttaa 51085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28824621 - 28824534
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| | |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  28824621 tcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaa 28824534  T

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Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 38320003 - 38320098
Alignment:
Q  105 aatgattgttcaataaattggattttgatagattttg-tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||||||| | ||||| |||||||||||||||||| |||| |||| ||||| ||||||| ||  ||||||||||||||||||| |||| ||||||    
T  38320003 aatgattgtttactaaataggattttgatagattttgttgggtttttttagtg-aattttagcacaaaaaagtctttcatgaaaatatgatatttct 38320098  T

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Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 730099 - 730186
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  730099 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 730186  T

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Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 953812 - 953883
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa 72  Q
    |||||||||| |||||||||||| |||||||||||| ||||||| ||||||||| || |||| ||| |||||    
T  953812 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcacttaaaaaaa 953883  T

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Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15835302 - 15835215
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  15835302 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 15835215  T

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Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25612108 - 25612195
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  25612108 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 25612195  T

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Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 49198516 - 49198430
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| ||| ||||||||||||||| | ||||||||||||| | ||  ||||||| |||||||  ||||||||||||    
T  49198516 tcaatcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaa 49198430  T

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Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 953770 - 953855
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattc 86  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||    
T  953770 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattc 953855  T

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Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 19452057 - 19451973
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtatt 85  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| |||||||||    
T  19452057 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatt 19451973  T

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Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48524270 - 48524354
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtatt 85  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| ||||  ||||||| ||||| || |||||||||    
T  48524270 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatt 48524354  T

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Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18798442 - 18798529
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  18798442 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 18798529  T

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Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19452099 - 19452012
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| ||||||||||||||||| ||    ||||| |||||||| |||| |||||||    
T  19452099 tcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaa 19452012  T

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Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22183321 - 22183408
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||| ||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  22183321 tcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 22183408  T

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Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35279623 - 35279710
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| ||||||| |||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  35279623 tcaatcaagactctttccaatttaaaaaaagacttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 35279710  T

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Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 37014885 - 37014802
Alignment:
Q  5 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||| ||||||  |||| |||| ||||||| |||||||||| |||||| ||  |||||||||| ||||| ||||||||||||    
T  37014885 tcaagaatctttgcaatttaaaaagagtcttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaa 37014802  T

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Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49230837 - 49230924
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  49230837 tcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 49230924  T

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Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51701531 - 51701618
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||| ||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  51701531 tcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 51701618  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 15835319 - 15835257
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  15835319 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 15835257  T

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Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||||||||||||| |||||||||||||||||||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

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Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

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Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

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Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  81 gtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagatttt 140  Q
    ||||||||||||||||||||||| || | ||||| |||||||  ||||||||| ||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

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Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6312525 - 6312612
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||| ||| |||||||||| |||||| ||  ||||||  |||||||| || |||||||||    
T  6312525 tcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 6312612  T

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Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8141377 - 8141290
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||| ||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  8141377 tcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 8141290  T

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Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21222099 - 21222185
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||| ||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  21222099 tcaatcaagactcttttcaatttaaaaaaagt-ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 21222185  T

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Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28387642 - 28387555
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||  ||||||||||||||| | ||  ||||||  |||||||| || |||||||||    
T  28387642 tcaatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 28387555  T

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Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29396637 - 29396550
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||| ||||  ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  29396637 tcaatcaagactttttgcaatttaaaaaaaatcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 29396550  T

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Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35679377 - 35679290
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||| ||||||   |||| |||||||||||| ||||||||||||||| | ||  ||||||| ||||| || ||| ||||||||    
T  35679377 tcaatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaa 35679290  T

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Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 46328017 - 46328080
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  46328017 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 46328080  T

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Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 6312508 - 6312570
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||  ||||||||||||    
T  6312508 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaa 6312570  T

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Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14494160 - 14494234
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtc 75  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| ||||||||    
T  14494160 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtc 14494234  T

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Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 19452116 - 19452054
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||| ||    ||||| |||||||| ||||||||||||    
T  19452116 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaa 19452054  T

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Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 25612091 - 25612153
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||| ||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  25612091 aaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 25612153  T

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Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 28824638 - 28824576
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||| ||  | ||||| |||||||| |||| |||||||    
T  28824638 aaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaa 28824576  T

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Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 29219222 - 29219284
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  29219222 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 29219284  T

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Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47780661 - 47780749
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaa--aagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| ||| |||||||  |||||||| | ||||||||||||| | |   ||||||| |||||||| ||||||||||||    
T  47780661 tcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaa 47780749  T

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Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29219239 - 29219292
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54  Q
    |||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  29219239 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 29219292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 29208801 - 29208837
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29208801 ttttaaaaatgtctttaggtattcaatcaagactttt 29208837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 33243348 - 33243312
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||||||||| || |||||||||||||||||||||    
T  33243348 ttttaaaaaagtttttaggtattcaatcaagactttt 33243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 33263521 - 33263485
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||||||||| || |||||||||||||||||||||    
T  33263521 ttttaaaaaagtttttaggtattcaatcaagactttt 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 38536315 - 38536251
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||| ||||||||||||||||| ||  ||||||  |||||||  || |||||||||    
T  38536315 taaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaa 38536251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 38558533 - 38558469
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||| ||||||||||||||||| ||  ||||||  |||||||  || |||||||||    
T  38558533 taaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaa 38558469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 42657763 - 42657795
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagacttt 56  Q
    ||||||||||||| |||||||||||||||||||    
T  42657763 taaaaaagtcttgtggtattcaatcaagacttt 42657795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45760259 - 45760171
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc-atttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| |||||||   |||| |||||||||||| | ||||||||||||| | ||  || ||||| |||||||| ||||||||||||    
T  45760259 tcaatcaaaactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaa 45760171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 31895695 - 31895937
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  31895695 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 31895794  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31895795 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 31895894  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31895895 tgagattgtttttattttaaaagttactatctttttcttctca 31895937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 14262639 - 14262412
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  14262639 tcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaat 14262540  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14262539 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttct 14262440  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    ||||||||||||| ||||||||||||||    
T  14262439 tgagattgtttttcttttaaaagttact 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 34759257 - 34759025
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  34759257 tcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaa 34759158  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34759157 tttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttc 34759058  T
Q  200 ttgagattgtttttattttaaaagttactatct 232  Q
    |||||||| ||||| ||||||||||||||||||    
T  34759057 ttgagattatttttcttttaaaagttactatct 34759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 34773408 - 34773639
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  34773408 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaat 34773507  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  34773508 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc- 34773606  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
              |||||||||||||||||||||||||||||||||    
T  34773607 ----------tttattttaaaagttactatctttttcttctca 34773639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 7497099 - 7497315
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattg 124  Q
    |||||||||||| ||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||||| || || |||| |||||||||    
T  7497099 aaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattg 7497198  T
Q  125 gattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagt 224  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  7497199 gattttgatggattttgtgg-attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattatttttcttttaaaagt 7497297  T
Q  225 tactatctttttcttctc 242  Q
    |||||||| ||| |||||    
T  7497298 tactatctctttattctc 7497315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 30385263 - 30385034
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  30385263 tcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 30385164  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||          ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  30385163 ttcgaaggattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgagatttct 30385076  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||| ||||||||| |||||||||    
T  30385075 tgagattgtttttcttttaaaaattactatctctttcttctc 30385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 6197684 - 6197472
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  6197684 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 6197585  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  6197584 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 6197485  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  6197484 taggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 2300944 - 2300744
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||   ||||||| ||||||||||||||    
T  2300944 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaat 2300845  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  2300844 ttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 2300745  T
Q  201 t 201  Q
    |    
T  2300744 t 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 77 - 240
Target Start/End: Original strand, 31067568 - 31067721
Alignment:
Q  77 tgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagt 176  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  31067568 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt----------ttgtgggattttgtagtgtaattttaacaagaaaaagt 31067657  T
Q  177 ctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttc 240  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31067658 ctttcataaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttc 31067721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 7051847 - 7052044
Alignment:
Q  4 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttc 103  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||||||||    
T  7051847 atcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttc 7051946  T
Q  104 aaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 201  Q
     || ||||||| |||||||||||||||||| |||||||| ||||||| ||||  ||||||| || |||||||| |||||| |||  ||||||||||||    
T  7051947 gaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttctt 7052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 1391623 - 1391835
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| || ||||||||| || ||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  1391623 tcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 1391722  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||  || |||||||||||||||||||| |||||||| ||    
T  1391723 ttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcct 1391822  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  1391823 taggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 93 - 243
Target Start/End: Complemental strand, 4200541 - 4200401
Alignment:
Q  93 attcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 192  Q
    ||||||||||| || ||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  193 agatttcttgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200451 agatttcttgagattgtttttattttaaaagttactatctttttcttctca 4200401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 28002664 - 28002856
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||||||| |||||||||||  ||||||||||||||||| || |||| ||| ||||||||  ||| |||||||||||||||||||    
T  28002664 tcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaat 28002763  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 193  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||  ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  28002764 ttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 29076597 - 29076810
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || |||| ||| ||||| |||  || |||||||||||||||||||    
T  29076597 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaa 29076696  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| || ||||||| |||||||  ||||||||| |||||| | ||||||| ||||| ||||||| || |||||| |||||||| |||| |||||||||     
T  29076697 tttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagatttt 29076796  T
Q  200 ttgagattgttttt 213  Q
    ||  ||||||||||    
T  29076797 ttaggattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 29111570 - 29111784
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa--gtcctgtggtattcaaaatcattcaa 98  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || |||| ||| |||||  |||  || ||||||||||||||||||    
T  29111570 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaa 29111669  T
Q  99 atttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    ||||| || ||||||| |||||||  ||||||||| |||||| | ||||||| ||||| ||||||| || |||||| |||||||| |||| |||||||||    
T  29111670 atttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattt 29111769  T
Q  199 cttgagattgttttt 213  Q
     ||  ||||||||||    
T  29111770 tttaggattgttttt 29111784  T

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Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3848211 - 3848339
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||| |||||||||| ||| |||| ||| |||| |||||||||||||  ||||| ||| |||||||  ||||||||||||||||||| ||||    
T  3848211 tcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaaatcatttaaat 3848308  T
Q  101 ttcaaatgattgttcaataaattggattttg 131  Q
    ||  |||||||||| ||||||||| ||||||    
T  3848309 tttgaatgattgtttaataaattgaattttg 3848339  T

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Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 656965 - 657065
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||| ||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  ||||||||| |||||||||||||    
T  656965 tcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaat 657063  T
Q  101 tt 102  Q
    ||    
T  657064 tt 657065  T

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Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2300986 - 2300899
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  2300986 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 2300899  T

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Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6197726 - 6197639
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  6197726 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 6197639  T

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Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34773366 - 34773453
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  34773366 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 34773453  T

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Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28002622 - 28002709
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| ||||||||||||   ||||||||||||| ||||  ||||||| |||||||| | ||||||||||    
T  28002622 tcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaa 28002709  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29076555 - 29076642
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| || ||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  29076555 tcaatcaagactctttccaatttaaataaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 29076642  T

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Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29111528 - 29111615
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| || ||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  29111528 tcaatcaagactctttccaatttaaataaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 29111615  T

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Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31895653 - 31895740
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| ||  ||||||||    
T  31895653 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 31895740  T

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Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 31895636 - 31895698
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  31895636 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 31895698  T

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Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 34773349 - 34773411
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  34773349 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 34773411  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  169 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

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Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1391581 - 1391668
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| |  |  ||||||| | |||||| ||||||||||||    
T  1391581 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaa 1391668  T

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Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 7051802 - 7051885
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtat 84  Q
    |||||||||||||||||  | || |||||||||||| ||||| | ||||||| | ||  ||||||| |||||||| ||||||||    
T  7051802 tcaatcaagactctttgcaacttaaaaaaagtcttgtggtatacgatcaagattctttgtcatttaaaaaaagtcttgtggtat 7051885  T

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Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 14262657 - 14262594
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  14262657 aaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaa 14262594  T

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Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 14000311 - 14000069
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  14000311 tcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 14000212  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000211 tttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 14000112  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14000111 tgagattgtttttattttaaaagttactatctttttcttctca 14000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 1152309 - 1152068
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||    
T  1152309 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 1152210  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |  ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1152209 ttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttct 1152110  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    | ||||||||||| |||||||||||||||||| |||||||||    
T  1152109 taagattgtttttcttttaaaagttactatctctttcttctc 1152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 13925931 - 13926172
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| |||||||| ||||||||||||||||||||||||    
T  13925931 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaat 13926030  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  13926031 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttct 13926130  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| || ||||||||||||||| |||||||||    
T  13926131 tgagattgtttttcttctaaaagttactatctctttcttctc 13926172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 7947779 - 7947538
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||| ||||||||| |||||||||||| ||||| |||||||||    
T  7947579 tgaaattgtttttcttttaaaagttaatatctctttcttctc 7947538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 4240658 - 4240433
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  4240658 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 4240559  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4240558 ttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttct 4240469  T
Q  201 tgagattgtttttattttaaaagttactatcttttt 236  Q
    ||||||||||||| ||||||||||||||||||||||    
T  4240468 tgagattgtttttcttttaaaagttactatcttttt 4240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 28 - 238
Target Start/End: Original strand, 39852372 - 39852582
Alignment:
Q  28 aaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggat 127  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| || ||||||| | ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  128 tttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttac 227  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttac 39852571  T
Q  228 tatctttttct 238  Q
    ||||| |||||    
T  39852572 tatctctttct 39852582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 4550463 - 4550246
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  4550463 tcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 4550364  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  4550363 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttgt 4550264  T
Q  201 tgagattgtttttatttt 218  Q
    ||||||||||||| ||||    
T  4550263 tgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 40013908 - 40013687
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||    
T  40013908 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaat 40013809  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||| ||||||||||| ||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40013808 ttcgaaggattgtttaatcaattggattttaat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 40013719  T
Q  201 tgagattgtttttattttaaaagttactatct 232  Q
    ||||||||||||| |||| |||||||||||||    
T  40013718 tgagattgtttttgtttttaaagttactatct 40013687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 1461344 - 1461113
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  1461344 tcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaat 1461245  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  1461244 ttcgaaggattgtttaataaattggattttgat----------ggattttgtactgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 1461155  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||| | |||||||||    
T  1461154 tgagattgtttttcttttaaaagttactatatctttcttctc 1461113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 5949109 - 5949339
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  5949109 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcactta-aaaaaatcttgtggtattcaaaatcattcaaat 5949207  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5949208 ttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 5949297  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||| ||||| ||| |||||    
T  5949298 tgagattgtttttcttttaaaagttattatctctttattctc 5949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 22746297 - 22746501
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||| |||||||||||||||||||    
T  22746297 tcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaat 22746396  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| ||||||||| |||||||| ||||||||||||        |||||||||||||||||||| |||||||||||||||| ||||||||    
T  22746397 ttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttct 22746488  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  22746489 taagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 21147067 - 21147279
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  21147067 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 21147166  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  21147167 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 21147266  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  21147267 taggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 5273125 - 5272925
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||  ||||||||||||||||| || |||||||| ||||||||  |||||||||||||||||||||||    
T  5273125 tcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaat 5273026  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |||||||||||    
T  5273025 ttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 5272926  T
Q  201 t 201  Q
    |    
T  5272925 t 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 37013914 - 37014124
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||||||||||||    
T  37013914 tcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaat 37014013  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || | ||||| |||||||||||                    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  37014014 ttcgaagggttgtttaataaattgga--------------------ttttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttct 37014093  T
Q  201 tgagattgtttttattttaaaagttactatc 231  Q
    ||||||||||||| |||||||||||||||||    
T  37014094 tgagattgtttttcttttaaaagttactatc 37014124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 33656234 - 33656035
Alignment:
Q  14 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgt 113  Q
    |||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||| ||   ||||||||||||||||||||||||| || ||||||    
T  33656234 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgt 33656135  T
Q  114 tcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    | |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  33656134 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 139273 - 139473
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||| || |||||||||||||||||||| |||| ||| ||||||||  |||||||||||||||||||||||    
T  139273 tcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 139372  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||   ||||||||| |||||||| |||||||  |||| |||||||| | ||||||||||||||| |||| |||||||||||    
T  139373 ttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttct 139472  T
Q  201 t 201  Q
    |    
T  139473 t 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 7016945 - 7016745
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||   |||| ||||||||||||  |||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  7016945 tcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 7016846  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |||||||||||    
T  7016845 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 7016746  T
Q  201 t 201  Q
    |    
T  7016745 t 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 27459155 - 27458944
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||| |||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||| ||    
T  27459155 tcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcactta-aaaaagtctagtggtattcaaaatcattcagat 27459057  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||| ||||||||| |||||||||||||||| ||||| ||||||| || |||||| || |||||||||| |||| ||||||    
T  27459056 tttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttct 27458957  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  27458956 taggattgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 849172 - 849334
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattgg 125  Q
    ||||||||||| ||||||||||||||||| || |||| ||| ||||||||   ||||||||||||||||||||||||| || ||||||| |||||||  |    
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  126 attttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 188  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  849272 attttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 32158104 - 32157891
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||   | |||| || | ||||||||  ||||||||||||||||||||||    
T  32158104 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaa 32158005  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaa---agtctttcatgaaaagatgagat 196  Q
    |||| || ||||||| |||||||| ||||||||  |||||||||||||||| ||||  ||||||| || |||||   ||||||||||||||| |||||||    
T  32158004 tttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagat 32157905  T
Q  197 ttcttgagattgtt 210  Q
    ||||| | ||||||    
T  32157904 ttcttaaaattgtt 32157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 14465433 - 14465279
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||| ||||||  ||| |||||||| ||||||||||||||||||||||||    
T  14465433 tcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaat 14465334  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagt 155  Q
    ||| || ||||||| ||||||| ||||||||||  ||||||||| ||||| ||||    
T  14465333 ttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 6460792 - 6460965
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||| ||  |||||||||||||||| || |||||||| ||||| ||  |||||||||||||||||||||||    
T  6460792 tcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaat 6460891  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaa 174  Q
    ||| || | ||||| |||||||  ||||||||| ||||||| |||||||| ||||| ||||||| || ||||||    
T  6460892 ttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 9689660 - 9689869
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||| ||||||| ||||||   | | ||||||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||||| ||||    
T  9689660 tcaatcaagactctt-gtcatttaaaaaaaca-tcgtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaat 9689756  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| ||||||||||  ||||||| ||||||||| |||| |||| |||||| | ||  |||||||  | ||||||||||||||| |||| || ||||||||    
T  9689757 ttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttct 9689856  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  9689857 tatgattgttttt 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 9220913 - 9220711
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| ||||||||||||||  ||||||||||| | ||||||||||||||| || |||| ||| |||||||| | || |||||||||||||||||||    
T  9220913 tcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaat 9220814  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||| |||          |||| ||||| ||||||| ||||  |||||||||| ||||||||||||| |||||| |||| ||||||    
T  9220813 ttctaaggattgtttaatgaat----------tagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttct 9220724  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  9220723 taggattgttttt 9220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5273167 - 5273080
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| | |||||||||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| | ||||||||||    
T  5273167 tcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaa 5273080  T

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Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21147025 - 21147112
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  21147025 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 21147112  T

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Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40013950 - 40013863
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  40013950 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 40013863  T

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Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33656291 - 33656202
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga--cttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | |||||||||||||  |||||  ||||||| |||||||| ||||||||||||    
T  33656291 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaa 33656202  T

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Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 139231 - 139318
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||| ||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  139231 tcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaa 139318  T

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Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5273209 - 5273122
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| |||||   |||| |||||||||||| | ||||||||||||| ||||  ||||||| |||||||| |||| |||||||    
T  5273209 tcaatcaagattctttccaatttaaaaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaa 5273122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14000353 - 14000266
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||| ||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  14000353 tcaatcaagactttttgcaatttaaaaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaa 14000266  T

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Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37013872 - 37013959
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  37013872 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaa 37013959  T

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Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32158147 - 32158059
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaa--gtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| ||| |||||||||  |||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  32158147 tcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 32158059  T

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Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 1152327 - 1152264
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  1152327 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 1152264  T

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Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4240700 - 4240613
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||| ||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  4240700 tcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 4240613  T

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Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 5949091 - 5949154
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  5949091 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 5949154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27459197 - 27459110
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | |||||||| |||| | ||  ||||||| |||||||| ||| ||||||||    
T  27459197 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaa 27459110  T

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Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 4550522 - 4550460
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  4550522 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 4550460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 14000370 - 14000308
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| ||||| || ||||||||||||    
T  14000370 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttgtggtattcaa 14000308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 37013855 - 37013917
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  37013855 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 37013917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 40013967 - 40013905
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| | ||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  40013967 aaaaagtcttgtgatattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 40013905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4550505 - 4550452
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 54  Q
    |||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  4550505 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 4550452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 13925891 - 13925976
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| ||||  | || |||||||| ||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  13925891 aatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 13925976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 26806611 - 26806578
Alignment:
Q  24 taaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||| ||||||||||||||||||||    
T  26806611 taaaaaagtcttgtggtattcaatcaagactttt 26806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 194; Significance: 1e-105; HSPs: 3)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10560 - 10797
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||    
T  10560 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaat 10659  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10660 ttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 10759  T
Q  201 tgagattgtttttattttaaaagttactatctttttct 238  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  10760 tgagattgtttttgttttaaaagttactatctctttct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10518 - 10605
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  10518 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 10605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 10501 - 10563
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  10501 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 10563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 18177268 - 18177501
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  18177268 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaat 18177367  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  18177368 ttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttct 18177467  T
Q  201 tgagattgtttttattttaaaagttactatcttt 234  Q
    ||||||||||||||||||||||||||||||||||    
T  18177468 tgagattgtttttattttaaaagttactatcttt 18177501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 26788785 - 26789026
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa--gtcctgtggtattcaaaatcattcaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  ||| ||||||||||||||||||||||    
T  26788785 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaa 26788884  T
Q  99 atttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    ||||  || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  26788885 attttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat---aagatgagattt 26788981  T
Q  199 cttgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26788982 cttgagattgtttttattttaaaagttactatctttttcttctca 26789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 10657407 - 10657648
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  10657407 tcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 10657506  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  10657507 ttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttct 10657606  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| ||||||||| |||||||| |||||||||    
T  10657607 tgagattgtttttcttttaaaaggtactatctctttcttctc 10657648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 28844556 - 28844797
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  28844556 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 28844655  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  28844656 ttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttct 28844755  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  28844756 tgagattgtttttcttttaaaagttagtatctatttcttctc 28844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 33135624 - 33135864
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||    
T  33135624 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaat 33135723  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  33135724 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttct 33135822  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  33135823 tgagattgtttttcttttaaaagttattatctctttcttctc 33135864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 25288160 - 25288401
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  25288160 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaat 25288259  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  25288260 ttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttct 25288359  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||| | |||||||||    
T  25288360 tgagattgtttttcttttaaaagttactatatatttcttctc 25288401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 28740492 - 28740275
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  28740492 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 28740393  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| ||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  28740392 ttcgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgagatttct 28740303  T
Q  201 tgagattgtttttattttaaaagttact 228  Q
    ||||||||||||| ||||||||||||||    
T  28740302 tgagattgtttttcttttaaaagttact 28740275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3463672 - 3463894
Alignment:
Q  1 tcaatcaaga-ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||     
T  3463672 tcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaat 3463771  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    ||||||| ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3463772 tttcaaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttc 3463861  T
Q  200 ttgagattgtttttattttaaaagttactatct 232  Q
    |||||||||||||| ||||||||||||||||||    
T  3463862 ttgagattgtttttgttttaaaagttactatct 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 13833631 - 13833401
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||    
T  13833631 tcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaat 13833532  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13833531 tttgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttct 13833442  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttct 241  Q
    |||||||| |||| |||||||| ||||||||| ||||||||    
T  13833441 tgagattgcttttcttttaaaaattactatctctttcttct 13833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 7026605 - 7026775
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  7026605 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 7026704  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 181  Q
    ||| || ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  7026705 ttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 16269692 - 16269904
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  16269692 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 16269791  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  16269792 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 16269891  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  16269892 taggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 24776356 - 24776568
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  24776356 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 24776455  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  24776456 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 24776555  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  24776556 taggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 31170833 - 31170621
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  31170833 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 31170734  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  31170733 ttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 31170634  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  31170633 taggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 6224755 - 6224535
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttagaaaaagtcctgtggtattcaaaatcattcaaatt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||| |||||||||    
T  6224755 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatt 6224656  T
Q  102 tcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 201  Q
    || || |||| || |||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6224655 tcgaaggattatttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T
Q  202 gagattgtttttattttaaaagttactatctttttcttctc 242  Q
    || ||||||||| |||||||||||||||||| |||||||||    
T  6224575 gatattgtttttcttttaaaagttactatctctttcttctc 6224535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 215434 - 215206
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||     
T  215434 tcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaac 215335  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||    |  ||||   ||| ||| |||     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  215334 ttcaaaggattgt----ttgattg---tttaataaatt-----ggattttgtagtgtaattttaac-agaaaaagtctttcatgaaaagatgagatttca 215248  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  215247 tgagattgtttttcttttaaaagttactatctctttcttctc 215206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 12407381 - 12407593
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  12407381 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 12407480  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  12407481 tttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttct 12407580  T
Q  201 tgagattgttttt 213  Q
    | |||||||||||    
T  12407581 taagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 14198786 - 14198574
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||| | |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||| |||||||||||||||||||||||    
T  14198786 tcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaat 14198687  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||||||||||    
T  14198686 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttct 14198587  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  14198586 taggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 20605237 - 20605449
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||| ||||    
T  20605237 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaat 20605336  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  20605337 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 20605436  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  20605437 taggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 22551972 - 22551760
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||| ||||||||  |||||||||||||| ||||||||    
T  22551972 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaat 22551873  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| |||||||||| | ||||||  |||||||| |||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||||    
T  22551872 ttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttct 22551773  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  22551772 tatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 10125501 - 10125270
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaa 98  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||||| ||| ||||||||   || |||||||||||||||||    
T  10125501 tcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaa 10125402  T
Q  99 atttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    |||||||| ||||||| |||||||||           ||||||||||||||| ||||| |||||||||||||||||||||||||| |||| | |||||||    
T  10125401 atttcaaaggattgtttaataaattg----------aattttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagattt 10125312  T
Q  199 cttgagattgtttttattttaaaag-ttactatctttttctt 239  Q
    ||| ||||||||||| ||||||||| ||||||||| ||||||    
T  10125311 cttaagattgtttttcttttaaaagtttactatctctttctt 10125270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 378938 - 379169
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||| ||||||  ||||||| |||||||    ||||||||||||||||||||||    
T  378938 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaatcattcaaat 379037  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||||||||||||||||||          |||||||||||||||||||||||||| || |||||||||||||||||||| |    
T  379038 tttgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgagatttat 379127  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||| ||||||||| |||||||||    
T  379128 tgagattgtttttcttttaaaacttactatctctttcttctc 379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 35317063 - 35317275
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||||||   ||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  35317063 tcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 35317162  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| || ||||||||    
T  35317163 ttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttct 35317262  T
Q  201 tgagattgttttt 213  Q
    | | |||||||||    
T  35317263 taacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 43078653 - 43078805
Alignment:
Q  90 atcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 189  Q
    |||||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  190 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    || ||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  43078753 ataagatttcttgagattgtttttgttttaaaagttagtatctctttcttctc 43078805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 43847647 - 43847859
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  || ||||||||||||||||||||    
T  43847647 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaat 43847746  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  || |||||| |||||||||| ||||| ||||| ||||||| || |||||||||| ||||||||| |||||||||||    
T  43847747 ttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttct 43847846  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  43847847 taggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 305674 - 305464
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  305674 tcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 305575  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  |||||||||| |||||||  ||||| ||| ||||||||| |||||| ||||| |||||||  | |||||||||||||||||||| |||||||||||    
T  305574 tttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttct 305475  T
Q  201 tgagattgttt 211  Q
    |  ||||||||    
T  305474 taggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 5093256 - 5093044
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||  || |||| ||| ||||||||  || ||||||||||||||||||||    
T  5093256 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaat 5093157  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||||||||| || || ||||||| || ||||||||||||||| |||| |||||||||||    
T  5093156 tttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 5093057  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  5093056 taggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 32125251 - 32125454
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcat---catttagaaaaagtcctgtggtattcaaaatcattca 97  Q
    |||||||| | |||||||||||| ||||||||| || ||||||||||||||||| || ||   |||||| ||||||||  ||||||||||||||||||||    
T  32125251 tcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattca 32125350  T
Q  98 aatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 197  Q
    |||||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||||||    
T  32125351 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatt 32125450  T
Q  198 tctt 201  Q
    ||||    
T  32125451 tctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3574848 - 3574978
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| |||||||||||||||||||    
T  3574848 tcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaat 3574947  T
Q  101 ttcaaatgattgttcaataaattggattttg 131  Q
    ||| || ||||||| ||||||||||||||||    
T  3574948 ttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 9120127 - 9120339
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    ||||||||||||||||   ||||||||||||||||| | ||||||||||||| | || |||| ||| ||||| ||  ||| |||||||||||||||| ||    
T  9120127 tcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagat 9120226  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    || ||| ||||||| |||||||| ||||||||| |||||||||||||||| ||||| |||||||  | | |||| ||||||||||||| |||||||||||    
T  9120227 tttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttct 9120326  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  9120327 taggattgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 1789443 - 1789630
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||  | ||||||||||| ||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  1789443 tcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 1789542  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 188  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| || || ||||||| || ||||||||||||||| ||||    
T  1789543 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 44765776 - 44765939
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  44765776 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 44765875  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaatttta 164  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| |||||||    
T  44765876 ttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 44765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 7027051 - 7027129
Alignment:
Q  164 aacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 7027129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 26601407 - 26601279
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||||    
T  26601407 aatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaattt 26601308  T
Q  103 caaatgattgttcaataaattggattttg 131  Q
    | |||| ||||| |||||||  |||||||    
T  26601307 cgaatgtttgtttaataaatcagattttg 26601279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 3574971 - 3575049
Alignment:
Q  144 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 222  Q
    ||||||||||||||||||||||||| ||||| | |||| | ||||| ||||||||||||||||||||||| ||||||||    
T  3574971 ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20605153 - 20605240
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||    ||||| |||||||| |||| |||||||    
T  20605153 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaa 20605240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24776314 - 24776401
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| | |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  24776314 tcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 24776401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 21370752 - 21370631
Alignment:
Q  8 agactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaat 107  Q
    ||||||||| | |||| |||||||| | | | ||||||||||| |  |||||||| | | |||||||| ||||||||||||||||||||||||||  ||     
T  21370752 agactctttcttatttaaaaaaagtttagtgatattcaatcaaaaaatttcatcactcaaaaaaagtcttgtggtattcaaaatcattcaaattttgaag 21370653  T
Q  108 gattgttcaataaattggattt 129  Q
     ||||||  |||||||||||||    
T  21370652 tattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 19145036 - 19145123
Alignment:
Q  10 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaa 98  Q
    ||||||| |||||| ||||||| |||| |||||||||||||||| |||||||| ||| |||||||  ||  ||||||||||||||||||    
T  19145036 actctttatcatttaaaaaaagacttgtggtattcaatcaagac-tttcatcacttaaaaaaagttatggagtattcaaaatcattcaa 19145123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5093298 - 5093211
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  5093298 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 5093211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7026563 - 7026650
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  7026563 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 7026650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12407339 - 12407426
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||| |||||   ||||||||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  12407339 tcaatcaagattcttttcaattttaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 12407426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16269650 - 16269737
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  16269650 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 16269737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20605111 - 20605198
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  20605111 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 20605198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20605195 - 20605282
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  20605195 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 20605282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26788743 - 26788830
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  26788743 tcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 26788830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31170875 - 31170788
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  31170875 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 31170788  T

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Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13833673 - 13833599
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtc 75  Q
    |||||||||||| ||||  | || |||||||||||| |||||||||||||||||||| |||||||  ||||||||    
T  13833673 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttttatcattttaaaaaagtc 13833599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 7026545 - 7026608
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  7026545 aaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 7026608  T

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Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14198827 - 14198741
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||||||| | |||| |||||||||||| | ||||||||||| | | ||  ||||||| |||||||| ||||||||||||    
T  14198827 tcaatcaagactctttctaattt-aaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaa 14198741  T

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Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28844514 - 28844601
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  28844514 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 28844601  T

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Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32125209 - 32125296
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||| | | ||  ||||||| |||||||| ||||||||||||    
T  32125209 tcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaa 32125296  T

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Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33135582 - 33135669
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  |||| |||||||| ||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  33135582 tcaatcaagactttttgcaatttaaaaaaagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 33135669  T

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Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44765734 - 44765821
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||| |||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  44765734 tcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 44765821  T

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Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10125543 - 10125469
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtc 75  Q
    |||||||||||||||||  |||| |||||||| ||| ||||||||||||||||| ||  ||||||  ||||||||    
T  10125543 tcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtc 10125469  T

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Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 26788726 - 26788788
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    ||||| |||||||| ||||||||||||    
T  26788726 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaa 26788788  T

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Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 8172139 - 8172279
Alignment:
Q  3 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaattt 102  Q
    |||||| ||||||| ||| || | |||||||||| |||||| |||||||||| ||  ||| ||  |||||||  |||||||||| ||| |||||  ||||    
T  8172139 aatcaatactctttatcacttaagaaaagtcttgtggtatttaatcaagactctttgtcacttcaaaaaagttatgtggtattcgaaaacattctgattt 8172238  T
Q  103 caaatgattgttcaataaattggattttgatagattttgtg 143  Q
      || ||||  | ||||||||||||||||  ||||||||||    
T  8172239 tgaaggatttcttaataaattggattttgtgagattttgtg 8172279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 22551995 - 22551927
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  22551995 atttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 22551927  T

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Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 43847624 - 43847692
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||||||||    
T  43847624 atttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 43847692  T

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Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 215476 - 215389
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||| ||  |||||||| || |||||||||    
T  215476 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaa 215389  T

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Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 28740510 - 28740447
Alignment:
Q  25 aaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||||||||||||||| ||  ||||||  |||||||| || |||||||||    
T  28740510 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 28740447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 215493 - 215431
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  215493 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 215431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 378921 - 378983
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  378921 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 378983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 24776297 - 24776359
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||| ||  | ||||| |||||||| |||| |||||||    
T  24776297 aaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaa 24776359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 28844497 - 28844559
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  28844497 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaa 28844559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 305717 - 305629
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||| |||||| | ||||||||||||| | ||  ||||||  |||||||| ||||||||||||    
T  305717 tcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaa 305629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 20157795 - 20157759
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  20157795 ttttaaagaagtctttaggtattcaatcaagactttt 20157759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  21 ttttaaaaaagtcttgaggtattcaatcaagactttt 57  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 39824 - 39583
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||| ||| |||| ||| |||||||||||||||||||||||     
T  39824 tcaatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaac 39725  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39724 ttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttct 39625  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  39624 tgagattgtttttcttttaaaagttactatctctttcttctc 39583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 39883 - 39821
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| |||||||||||||||||||| |  | ||| |||||||  ||||||||||||    
T  39883 aaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaa 39821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 13882 - 14114
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  13882 tcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 13981  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| ||||||||||||||||||          |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  13982 ttcaaaagattgtttaataaattggattttgat----------ggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttct 14071  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    ||||||||||||| |||||||||||||||||| ||||||||||    
T  14072 tgagattgtttttcttttaaaagttactatctctttcttctca 14114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 164; Significance: 9e-88; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 21445 - 21213
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  21445 tcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 21346  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| ||||||||||||||||||          |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  21345 ttcaaaagattgtttaataaattggattttgat----------ggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttct 21256  T
Q  201 tgagattgtttttattttaaaagttactatctttttcttctca 243  Q
    ||||||||||||| |||||||||||||||||| ||||||||||    
T  21255 tgagattgtttttcttttaaaagttactatctctttcttctca 21213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 28475 - 28584
Alignment:
Q  135 gattttgtgggattttg-tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctt 233  Q
    |||||||  |||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  28475 gattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatctc 28574  T
Q  234 tttcttctca 243  Q
    ||||||||||    
T  28575 tttcttctca 28584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 58283 - 58042
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt-catcatttagaaaaagtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||||| |||| ||  |||||||||||||| |||||||| ||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||    
T  58283 tcaatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaatcattcaaa 58185  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  58184 tttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgagatttc 58085  T
Q  200 ttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  58084 ttgagattgtttttcttttaaaagttactatctctttcttctc 58042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 863 - 1101
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaa-gtcctgtggtattcaaaatcattcaaa 99  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||||||||    
T  863 tcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaa 962  T
Q  100 tttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 199  Q
    |||| ||  ||| || ||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  963 tttcgaagaattatttaataaatag-attttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttc 1061  T
Q  200 ttgagattgtttttattttaaaagttactatctttttcttctc 242  Q
    ||||||||||||   |||||||||||||||||| |||||||||    
T  1062 ttgagattgttt---ttttaaaagttactatctctttcttctc 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 821 - 908
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||  ||||| || || |||||||||    
T  821 tcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaa 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 26 - 242
Target Start/End: Complemental strand, 37089 - 36876
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattgg 125  Q
    ||||||||||| | ||||||||||||||| ||  ||||||  |||||||| || |||||||||||||||| ||||||| ||  |||||| ||||||||||    
T  37089 aaaaagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattgg 36990  T
Q  126 attttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 225  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   || |||||||||||    
T  36989 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattg---ttcttttaaaagtt 36893  T
Q  226 actatctttttcttctc 242  Q
    | ||||| |||||||||    
T  36892 attatctctttcttctc 36876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37072 - 37027
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  37072 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 100211 - 100411
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||||||| |||| |||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  100211 tcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 100310  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    |||||| ||||||| |||||||   |||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  100311 ttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttct 100410  T
Q  201 t 201  Q
    |    
T  100411 t 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 100188 - 100256
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||||||| ||||    
T  100188 atttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaa 100256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 15240 - 15028
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  15240 tcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 15141  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||    
T  15140 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttct 15041  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  15040 taggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15282 - 15195
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||| ||||||||    
T  15282 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaa 15195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 15883 - 15671
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||    
T  15883 tcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 15784  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||    
T  15783 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttct 15684  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  15683 taggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15925 - 15838
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||| ||| ||||||||    
T  15925 tcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaa 15838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 102093 - 102307
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaag--tcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaa 98  Q
    |||||||||| |||||||||||| |||||||  ||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||    
T  102093 tcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaa 102192  T
Q  99 atttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 198  Q
    ||||| || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |||||||||    
T  102193 atttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagattt 102292  T
Q  199 cttgagattgttttt 213  Q
    |||  ||||||||||    
T  102293 cttatgattgttttt 102307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 4200 - 4337
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  4200 tcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaat 4299  T
Q  101 ttcaaatgattgttcaataaattggattttgatagatt 138  Q
    ||  || ||||||| |||||||||||||||||| ||||    
T  4300 tttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 4135 - 4203
Alignment:
Q  20 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||| ||||||||||| ||||||||||||||||||||    | ||| |||||||| ||||||||||||    
T  4135 attttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaa 4203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4158 - 4245
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    |||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  | ||||  |||||||| || |||||||||    
T  4158 tcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaa 4245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 213
Target Start/End: Complemental strand, 38786 - 38600
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattgg 125  Q
    ||||||||||| ||||||||||||||||| || |||| ||| ||||||||  |||||||||||||||||||||||||| || ||||||| ||||| |  |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcag 38688  T
Q  126 attttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 213  Q
    |||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  38687 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 3795 - 3661
Alignment:
Q  105 aatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 204  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| |||||    
T  3795 aatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgag 3696  T
Q  205 attgtttttattttaaaagttactatctttttctt 239  Q
    ||||||||| |||||||||||||||||| ||||||    
T  3695 attgtttttcttttaaaagttactatctctttctt 3661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 39102 - 38890
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| ||||| |||||| |||||||||||| |||||||||| |||||| || |||| ||| || |||||  ||| |||||||||||||||||||    
T  39102 tcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaat 39003  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||  ||||||||| |||||||||||||||| ||||| ||||||  || |||||||||||||||||||| |||||||| ||    
T  39002 ttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcct 38903  T
Q  201 tgagattgttttt 213  Q
    |  ||||||||||    
T  38902 taggattgttttt 38890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 39119 - 39057
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||| | || |||||||| |||||||| ||||||||||||    
T  39119 aaaaagtcttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaa 39057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 14894 - 14991
Alignment:
Q  135 gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14894 gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttcttttaaaagttactatct 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 746 - 529
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaaaatcattcaaat 100  Q
    |||||||||| |||||||||||| |||||||| ||| ||||||||||||| ||| || |||| ||| |     |   |||||||||||||||||||||||    
T  746 tcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaat 647  T
Q  101 ttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 200  Q
    ||  || ||||||| |||||||   |||||||| |||||||||| ||||| ||||| ||||||   | |||||||||||| | ||||| |||||||||||    
T  646 ttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttct 547  T
Q  201 tgagattgtttttatttt 218  Q
    |  |||| ||||| ||||    
T  546 taggattttttttttttt 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 788 - 701
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||||||||   |||| |||||||||||| | ||||||||||||| | ||  ||||||| |||||||  ||||||||||||    
T  788 tcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaa 701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 805 - 743
Alignment:
Q  26 aaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagtcctgtggtattcaa 88  Q
    ||||||||||| ||||||||||||||||| || |  ||||| |||||||| |||| |||||||    
T  805 aaaaagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaa 743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 233737 - 233810
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagt 74  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| || ||| |||||||    
T  233737 tcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacacttaaaaaaagt 233810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 234585 - 234658
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagt 74  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| || ||| |||||||    
T  234585 tcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacacttaaaaaaagt 234658  T

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Target: scaffold0010; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 222569 - 222642
Alignment:
Q  1 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttagaaaaagt 74  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||| || ||| |||||||    
T  222569 tcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacacttaaaaaaagt 222642  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 199892 - 199980
Alignment:
Q  68 aaaaagtcctgtggtattcaaaatcattcaaatttcaaatgattgttcaataaattggattttgatagattttgtgggattttgtagtg 156  Q
    ||||||||  || ||||| ||||||||||||||||  || || |||| ||||||||| |||||||| ||||||||| |||||| |||||    
T  199892 aaaaagtctcgtagtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

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