View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17583_low_1 (Length: 460)
Name: NF17583_low_1
Description: NF17583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17583_low_1 |
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Alignment Details
Target: chr5 (Bit Score: 446; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 1 - 454
Target Start/End: Original strand, 26380740 - 26381193
Alignment:
| Q |
1 |
acccgtctttttcttcgccttataacccttatgaacaacatgttgtgtatccttcaccaagagggtcttcttttggaatggagaatgatttaggatcatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26380740 |
acccgtctttttcttcgccttataacccttatgaacaacatgttgtgtatccttcaccaagagggtcttcttttggaatggagaatgatttaggatcatg |
26380839 |
T |
|
| Q |
101 |
ggatgttacaacaaatcctatcatgtacactactactccaaatgtaaacaatgttccttcaacaccactttattttccttccaataggggacttcaacag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
26380840 |
ggatgttacaacaaatcctatcatgtacactactactccaaatgtaaacaatgttccttcaacaccactttattttccttctaataggggacttcaacag |
26380939 |
T |
|
| Q |
201 |
cttcctcaatctctttatcctactagacctattgaggaaccagtggcttttaaatgtgataatagttttatctttcaagagaatgacatgaaaaatgagt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26380940 |
cttcctcaatctctttatcctactagacctattgaggaaccagtggcttttaaatgtgataatagttttatctttcaagagaatgacatgaaaaatgagt |
26381039 |
T |
|
| Q |
301 |
gcaataattcattgttggctggtagtggtgttggtggtggtggtagaaagttttcagtttcacactcacaagaggcagtgattcctcaagtttctcattt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
26381040 |
gcaataattcattgttggctggtagtggtgttggtggtggtggtagaaagttttcagtttcacactcacaagaggcggtgattcctcaagtttctcattt |
26381139 |
T |
|
| Q |
401 |
gcctagtagaagtgaaaatagtagtaggagttttgtatttgatgatgatgatgt |
454 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26381140 |
gcctagtagaagtgaaaatagtagtaggagttttgtatttgatgatgatgatgt |
26381193 |
T |
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