View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17585_low_9 (Length: 245)
Name: NF17585_low_9
Description: NF17585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17585_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 3807693 - 3807479
Alignment:
| Q |
16 |
agatggataagtttgggtgatctactcatgagaaaacgatgcatccaatttagcatgccaatttgtacaagagttttcttaatacaaaattccaattcct |
115 |
Q |
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| T |
3807693 |
agatggataagtttgggtgatctactcatgagaaaacgatgcatccaatttagcatgccgatttgtacaagagttttcttaacacaacattccaattcct |
3807594 |
T |
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| Q |
116 |
cgacataaaggaatgcatgttatcaataagagaagcataaaagtgagttcgtgagatatcaattgctgtgttaaaatgattttctaatacaaattagatt |
215 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
3807593 |
cgacataaaggaatgcatgttatcaataagag-agcataaaagtgagtacgtgagatatcaattgatgtgttaaaatgattttctaatacaaattagatt |
3807495 |
T |
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| Q |
216 |
actgataataatgaga |
231 |
Q |
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|||||||||||||||| |
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| T |
3807494 |
actgataataatgaga |
3807479 |
T |
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