View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17588_high_39 (Length: 254)
Name: NF17588_high_39
Description: NF17588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17588_high_39 |
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Alignment Details
Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 30968077 - 30968260
Alignment:
| Q |
1 |
attttcattgtatt--gtcttataaatccattttacactaatcttcctgcttccagttggtaaatcagttagttcccatgtatcatttctttctatggct |
98 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
30968077 |
attttcattgtattttgtcttataaatccattttacactaatcttcctgcttccagttggta--------------------tcatttctttctatggct |
30968156 |
T |
|
| Q |
99 |
tcaatttcctgatccatagcctctttccaacaattgaactttgcagcttcctcataagtagcaggatcttctctattactgaaaaagccagagtctgaaa |
198 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30968157 |
tcaatttcctgatccatagcctctttccaacaattgaactttgcagcttcctcataagtagcaggatcttctctattactgaaaaagccagagtctgaaa |
30968256 |
T |
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