View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17588_high_56 (Length: 215)
Name: NF17588_high_56
Description: NF17588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17588_high_56 |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 7668392 - 7668572
Alignment:
| Q |
16 |
caaagggtaggtggtttcggtgcctcgatctgccccaagttttatcgatgaatcaattcttaacttaacccaaacattaactcacatgtgcttcatgttt |
115 |
Q |
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| T |
7668392 |
caaagggtaggtggtttcggtgcctcgatctgccccaagttttatcgatgaatcaattcttaacttaacccaaacattaactcacatgtgcttcatgtta |
7668491 |
T |
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| Q |
116 |
catacaatattgttttggtataatatttggagtcagcagtcacaaaccactaagaaacatgcaactaacgataacataatt |
196 |
Q |
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| T |
7668492 |
catacaatattgttttggtataatatttggagtcagcagtcacaaaccactaagaaacatgcaactaacgataacataatt |
7668572 |
T |
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