View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17588_low_47 (Length: 243)
Name: NF17588_low_47
Description: NF17588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17588_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 32967154 - 32967375
Alignment:
| Q |
5 |
tatatggaagccacagcttttctgggtttcagcaggagctcctcttgcatgtgtcatcatttcaaccatcatcacttttgtaatcaagggtcaacttcat |
104 |
Q |
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| T |
32967154 |
tatatggaagccacagcttttctgggtttcagctggagctcctcttgcatgtgtcatcatttcaaccatcatcacttttgtaatcaagggtcaacttcat |
32967253 |
T |
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| Q |
105 |
gatatcagtattgtaagtatctatagtgcttatgttatcatctatattattatgatttagtttcttaactaaaaaacaaatgtcatgttacttactagat |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32967254 |
gatatcagtattgtaagtatctatagtgcttatgttatcatctatattattatgatttagtttcttaactaaaaaaaaaatgtcatgttacttactagat |
32967353 |
T |
|
| Q |
205 |
tggtaaattgcaacaaggaata |
226 |
Q |
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|||||||||||||||||||||| |
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| T |
32967354 |
tggtaaattgcaacaaggaata |
32967375 |
T |
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