View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17588_low_9 (Length: 455)

Name: NF17588_low_9
Description: NF17588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17588_low_9
NF17588_low_9
[»] chr5 (53 HSPs)
chr5 (21-442)||(38834488-38834892)
chr5 (257-405)||(31588291-31588437)
chr5 (247-404)||(87196-87350)
chr5 (246-405)||(18999574-18999730)
chr5 (257-367)||(3935639-3935750)
chr5 (247-405)||(8648000-8648155)
chr5 (246-405)||(30415418-30415573)
chr5 (246-366)||(18339108-18339229)
chr5 (276-404)||(8750324-8750449)
chr5 (257-404)||(16284275-16284419)
chr5 (257-405)||(31176507-31176652)
chr5 (257-364)||(3406805-3406913)
chr5 (246-364)||(13987319-13987439)
chr5 (297-405)||(18999366-18999470)
chr5 (247-406)||(35373453-35373603)
chr5 (248-361)||(3406499-3406613)
chr5 (246-412)||(15978382-15978544)
chr5 (313-405)||(87019-87107)
chr5 (265-349)||(35383292-35383377)
chr5 (321-405)||(22231170-22231250)
chr5 (321-405)||(119184-119264)
chr5 (257-364)||(1650041-1650152)
chr5 (322-405)||(18340661-18340740)
chr5 (321-405)||(39402212-39402291)
chr5 (321-412)||(3191791-3191877)
chr5 (321-407)||(21949398-21949479)
chr5 (321-360)||(21949841-21949880)
chr5 (313-405)||(4187838-4187926)
chr5 (321-359)||(5747202-5747240)
chr5 (321-359)||(6543456-6543494)
chr5 (322-405)||(8750010-8750089)
chr5 (299-357)||(14626077-14626135)
chr5 (321-405)||(19353079-19353159)
chr5 (321-359)||(28641602-28641640)
chr5 (321-405)||(31093437-31093516)
chr5 (321-359)||(31162462-31162500)
chr5 (323-404)||(20892557-20892633)
chr5 (323-364)||(37813412-37813453)
chr5 (321-365)||(119794-119838)
chr5 (271-340)||(3935451-3935518)
chr5 (321-365)||(4186790-4186834)
chr5 (321-365)||(19352507-19352551)
chr5 (323-367)||(30351716-30351760)
chr5 (257-335)||(29751724-29751802)
chr5 (257-335)||(29752390-29752468)
chr5 (321-359)||(3192241-3192279)
chr5 (321-359)||(6543856-6543894)
chr5 (321-359)||(28641202-28641240)
chr5 (248-285)||(18339409-18339446)
chr5 (321-357)||(119054-119090)
chr5 (321-357)||(119968-120004)
chr5 (321-357)||(3406695-3406731)
chr5 (313-357)||(19353240-19353284)
[»] chr1 (43 HSPs)
chr1 (29-248)||(12389461-12389684)
chr1 (247-405)||(6751288-6751444)
chr1 (247-405)||(5172745-5172899)
chr1 (276-405)||(9880484-9880610)
chr1 (257-405)||(19895400-19895545)
chr1 (257-405)||(31436328-31436473)
chr1 (246-405)||(3591271-3591427)
chr1 (266-405)||(9880744-9880880)
chr1 (257-361)||(50359165-50359269)
chr1 (266-406)||(5683160-5683297)
chr1 (266-365)||(18180232-18180332)
chr1 (246-364)||(5683495-5683614)
chr1 (248-366)||(47541553-47541672)
chr1 (247-364)||(19895735-19895853)
chr1 (266-404)||(48155233-48155368)
chr1 (257-405)||(18179879-18180024)
chr1 (257-364)||(50359384-50359492)
chr1 (321-405)||(1500991-1501071)
chr1 (246-405)||(4288374-4288525)
chr1 (257-403)||(19976166-19976309)
chr1 (266-365)||(6751083-6751183)
chr1 (246-360)||(48155014-48155129)
chr1 (313-405)||(45664687-45664775)
chr1 (321-367)||(12869664-12869710)
chr1 (321-405)||(36793584-36793664)
chr1 (321-360)||(1500100-1500139)
chr1 (321-406)||(3591174-3591255)
chr1 (321-359)||(8997382-8997420)
chr1 (321-405)||(17968037-17968116)
chr1 (321-359)||(32266524-32266562)
chr1 (321-359)||(40124117-40124155)
chr1 (321-405)||(45230571-45230650)
chr1 (321-359)||(47410464-47410502)
chr1 (321-359)||(47410864-47410902)
chr1 (257-338)||(47541769-47541851)
chr1 (321-359)||(9122726-9122764)
chr1 (321-359)||(9123126-9123164)
chr1 (321-367)||(12868467-12868513)
chr1 (321-359)||(32266924-32266962)
chr1 (321-359)||(40124517-40124555)
chr1 (321-359)||(46802363-46802401)
chr1 (257-340)||(42723200-42723284)
chr1 (321-357)||(46802763-46802799)
[»] chr4 (61 HSPs)
chr4 (246-405)||(51906753-51906909)
chr4 (246-405)||(29691525-29691681)
chr4 (246-404)||(3296544-3296700)
chr4 (246-405)||(51906420-51906576)
chr4 (246-405)||(3296878-3297034)
chr4 (246-364)||(30608282-30608401)
chr4 (248-405)||(48553896-48554050)
chr4 (267-406)||(35166821-35166957)
chr4 (257-364)||(34129245-34129353)
chr4 (273-405)||(7118125-7118254)
chr4 (246-413)||(29691846-29692011)
chr4 (266-365)||(30608587-30608687)
chr4 (246-360)||(26168034-26168148)
chr4 (257-366)||(30047961-30048071)
chr4 (257-366)||(30062302-30062412)
chr4 (257-366)||(56106406-56106516)
chr4 (257-361)||(30952946-30953051)
chr4 (270-405)||(41510068-41510200)
chr4 (266-365)||(1791184-1791284)
chr4 (247-366)||(1791483-1791603)
chr4 (246-364)||(48760049-48760168)
chr4 (269-366)||(34129029-34129127)
chr4 (246-364)||(5544821-5544940)
chr4 (298-365)||(38759740-38759807)
chr4 (321-405)||(54142325-54142405)
chr4 (300-365)||(26984180-26984245)
chr4 (321-406)||(10580039-10580120)
chr4 (321-405)||(17288383-17288463)
chr4 (302-359)||(12108280-12108337)
chr4 (297-404)||(26168378-26168483)
chr4 (321-365)||(54143511-54143555)
chr4 (325-406)||(1791389-1791466)
chr4 (245-364)||(25916969-25917091)
chr4 (321-360)||(40841502-40841541)
chr4 (321-360)||(40841903-40841942)
chr4 (321-360)||(55347979-55348018)
chr4 (321-359)||(2669048-2669086)
chr4 (321-359)||(2669448-2669486)
chr4 (321-359)||(12922683-12922721)
chr4 (321-359)||(28957752-28957790)
chr4 (322-364)||(34294488-34294529)
chr4 (321-359)||(38026117-38026155)
chr4 (321-405)||(43979999-43980078)
chr4 (321-405)||(54167494-54167574)
chr4 (265-363)||(35469016-35469115)
chr4 (322-357)||(21235472-21235507)
chr4 (321-359)||(28505250-28505288)
chr4 (321-359)||(28957352-28957390)
chr4 (321-359)||(31227920-31227958)
chr4 (321-359)||(31228320-31228358)
chr4 (270-404)||(48759813-48759942)
chr4 (321-405)||(54168833-54168913)
chr4 (321-359)||(55347602-55347640)
chr4 (372-405)||(1791321-1791354)
chr4 (247-327)||(5545119-5545199)
chr4 (323-405)||(1317504-1317581)
chr4 (325-365)||(3296753-3296793)
chr4 (373-405)||(19310787-19310819)
chr4 (321-357)||(21235071-21235107)
chr4 (325-365)||(35166708-35166748)
chr4 (321-357)||(47053805-47053841)
[»] chr2 (53 HSPs)
chr2 (64-215)||(31422042-31422193)
chr2 (247-405)||(21267303-21267458)
chr2 (247-405)||(21182307-21182462)
chr2 (105-215)||(31252535-31252645)
chr2 (64-215)||(31303933-31304081)
chr2 (113-222)||(31357491-31357600)
chr2 (246-405)||(2517413-2517569)
chr2 (246-405)||(2191217-2191373)
chr2 (246-405)||(3691323-3691479)
chr2 (246-405)||(21217255-21217411)
chr2 (246-405)||(21264991-21265147)
chr2 (105-215)||(31290124-31290234)
chr2 (257-405)||(32114166-32114310)
chr2 (266-405)||(21216923-21217059)
chr2 (266-405)||(21265343-21265479)
chr2 (105-215)||(31372829-31372939)
chr2 (248-405)||(24093156-24093310)
chr2 (247-402)||(7083525-7083677)
chr2 (269-364)||(3691120-3691216)
chr2 (257-364)||(39729551-39729659)
chr2 (26-222)||(31317133-31317326)
chr2 (111-205)||(31383279-31383373)
chr2 (247-366)||(10706586-10706704)
chr2 (246-364)||(24093490-24093609)
chr2 (105-205)||(31279959-31280059)
chr2 (297-360)||(32114457-32114520)
chr2 (323-365)||(3624925-3624967)
chr2 (321-405)||(10709475-10709555)
chr2 (247-350)||(2606591-2606695)
chr2 (297-405)||(32860814-32860918)
chr2 (321-359)||(1804273-1804311)
chr2 (321-359)||(1804673-1804711)
chr2 (302-360)||(2036594-2036652)
chr2 (321-405)||(3854508-3854587)
chr2 (321-359)||(6476128-6476166)
chr2 (321-359)||(6476528-6476566)
chr2 (321-359)||(11451197-11451235)
chr2 (313-405)||(23222865-23222953)
chr2 (321-359)||(27377690-27377728)
chr2 (313-359)||(39096565-39096611)
chr2 (321-405)||(39947096-39947176)
chr2 (321-365)||(23221870-23221914)
chr2 (321-365)||(39945878-39945922)
chr2 (246-285)||(32861147-32861186)
chr2 (302-360)||(2035649-2035707)
chr2 (370-404)||(2606695-2606729)
chr2 (321-359)||(12090136-12090174)
chr2 (321-405)||(26525905-26525984)
chr2 (321-359)||(34037850-34037888)
chr2 (323-364)||(18105753-18105794)
chr2 (321-365)||(24093365-24093409)
chr2 (321-365)||(32861050-32861094)
chr2 (321-357)||(44934693-44934729)
[»] chr3 (46 HSPs)
chr3 (246-405)||(9218448-9218603)
chr3 (246-365)||(9217856-9217976)
chr3 (250-405)||(22814296-22814448)
chr3 (246-364)||(44504129-44504248)
chr3 (249-405)||(26741241-26741390)
chr3 (246-405)||(43933440-43933596)
chr3 (246-362)||(27013448-27013565)
chr3 (257-405)||(51471335-51471480)
chr3 (257-405)||(25770321-25770466)
chr3 (297-405)||(13637766-13637870)
chr3 (297-405)||(44504372-44504476)
chr3 (266-401)||(50732229-50732361)
chr3 (266-401)||(50780494-50780626)
chr3 (300-365)||(51755903-51755968)
chr3 (314-405)||(132062-132149)
chr3 (248-402)||(37172084-37172235)
chr3 (267-405)||(37172431-37172566)
chr3 (268-405)||(34743426-34743560)
chr3 (297-404)||(43933714-43933816)
chr3 (258-365)||(38485733-38485840)
chr3 (295-367)||(33225522-33225594)
chr3 (321-406)||(25770493-25770574)
chr3 (329-405)||(45728335-45728407)
chr3 (321-405)||(48868597-48868677)
chr3 (321-405)||(4199896-4199975)
chr3 (246-346)||(13637530-13637631)
chr3 (323-403)||(25770728-25770804)
chr3 (321-360)||(45539249-45539288)
chr3 (321-360)||(45539650-45539689)
chr3 (321-405)||(27475390-27475469)
chr3 (321-405)||(34949756-34949835)
chr3 (321-359)||(36899295-36899333)
chr3 (321-359)||(36899695-36899733)
chr3 (321-359)||(42606321-42606359)
chr3 (321-359)||(46689723-46689761)
chr3 (323-365)||(54588493-54588535)
chr3 (326-404)||(27013583-27013657)
chr3 (295-404)||(33226906-33227011)
chr3 (321-405)||(48867650-48867730)
chr3 (321-359)||(2388673-2388711)
chr3 (321-359)||(2389073-2389111)
chr3 (321-405)||(22407284-22407363)
chr3 (321-359)||(42606721-42606759)
chr3 (321-359)||(46690123-46690161)
chr3 (321-357)||(20826772-20826808)
chr3 (321-357)||(20831111-20831147)
[»] chr7 (38 HSPs)
chr7 (246-397)||(22948812-22948960)
chr7 (246-412)||(32092221-32092384)
chr7 (266-403)||(11974666-11974800)
chr7 (246-366)||(20543946-20544067)
chr7 (246-405)||(18152756-18152912)
chr7 (246-404)||(28838356-28838508)
chr7 (266-405)||(17075571-17075707)
chr7 (257-404)||(44803577-44803721)
chr7 (246-405)||(17075219-17075375)
chr7 (266-405)||(28852693-28852829)
chr7 (257-405)||(10466724-10466869)
chr7 (246-404)||(5029688-5029842)
chr7 (301-366)||(42750108-42750173)
chr7 (272-367)||(11975023-11975119)
chr7 (246-364)||(20544245-20544363)
chr7 (257-338)||(23548670-23548752)
chr7 (288-353)||(32092505-32092571)
chr7 (308-366)||(6621113-6621170)
chr7 (321-405)||(18443619-18443698)
chr7 (295-405)||(12933045-12933151)
chr7 (257-345)||(44803382-44803471)
chr7 (297-360)||(28854718-28854781)
chr7 (323-365)||(27311060-27311102)
chr7 (321-405)||(30939574-30939654)
chr7 (257-365)||(49053825-49053935)
chr7 (321-361)||(27310087-27310127)
chr7 (321-405)||(1244453-1244532)
chr7 (321-405)||(28898029-28898108)
chr7 (321-405)||(41298686-41298765)
chr7 (321-408)||(18443173-18443255)
chr7 (323-360)||(33848309-33848346)
chr7 (321-365)||(16755643-16755687)
chr7 (323-405)||(29783935-29784012)
chr7 (307-357)||(12908425-12908475)
chr7 (321-359)||(22954087-22954125)
chr7 (321-359)||(33847907-33847945)
chr7 (321-365)||(10466651-10466695)
chr7 (321-365)||(11992750-11992794)
[»] chr8 (38 HSPs)
chr8 (246-405)||(26997803-26997959)
chr8 (246-364)||(12489265-12489384)
chr8 (246-405)||(13315202-13315358)
chr8 (246-405)||(17915441-17915596)
chr8 (246-404)||(6297463-6297618)
chr8 (257-405)||(6297980-6298125)
chr8 (246-405)||(9800039-9800195)
chr8 (246-405)||(16662168-16662324)
chr8 (257-402)||(16662417-16662558)
chr8 (250-365)||(6297800-6297916)
chr8 (257-405)||(10047479-10047623)
chr8 (297-405)||(17914197-17914301)
chr8 (246-402)||(26243329-26243482)
chr8 (257-366)||(9800288-9800398)
chr8 (247-364)||(44024262-44024380)
chr8 (246-366)||(21006056-21006177)
chr8 (282-403)||(26720323-26720441)
chr8 (301-405)||(12489517-12489616)
chr8 (321-406)||(44024397-44024478)
chr8 (321-405)||(29917105-29917184)
chr8 (313-404)||(44148578-44148665)
chr8 (248-348)||(39234889-39234990)
chr8 (297-406)||(7344842-7344947)
chr8 (321-406)||(21005959-21006040)
chr8 (246-344)||(21005779-21005878)
chr8 (321-405)||(4624533-4624613)
chr8 (266-367)||(10047832-10047934)
chr8 (295-405)||(40304684-40304790)
chr8 (246-405)||(11089228-11089384)
chr8 (321-365)||(36155307-36155351)
chr8 (322-365)||(20682744-20682787)
chr8 (111-146)||(21000759-21000794)
chr8 (111-146)||(21010573-21010608)
chr8 (313-405)||(44803565-44803653)
chr8 (321-359)||(29917548-29917586)
chr8 (321-357)||(4694442-4694478)
chr8 (323-359)||(22601540-22601576)
chr8 (323-359)||(24846004-24846040)
[»] scaffold0009 (3 HSPs)
scaffold0009 (246-403)||(108056-108210)
scaffold0009 (246-405)||(107722-107878)
scaffold0009 (322-406)||(107894-107974)
[»] chr6 (28 HSPs)
chr6 (257-404)||(7645927-7646071)
chr6 (246-363)||(17157584-17157702)
chr6 (247-363)||(21113067-21113184)
chr6 (257-405)||(5974011-5974156)
chr6 (257-405)||(8710286-8710430)
chr6 (269-404)||(14712963-14713095)
chr6 (313-405)||(211441-211529)
chr6 (270-405)||(211679-211811)
chr6 (297-405)||(4510188-4510293)
chr6 (266-357)||(25932339-25932431)
chr6 (246-405)||(25932083-25932235)
chr6 (334-405)||(17157856-17157923)
chr6 (297-349)||(1869503-1869555)
chr6 (322-364)||(20522167-20522209)
chr6 (321-405)||(34984554-34984633)
chr6 (321-406)||(14712829-14712910)
chr6 (321-359)||(14257188-14257226)
chr6 (321-359)||(14257588-14257626)
chr6 (321-359)||(20824205-20824243)
chr6 (321-405)||(33107371-33107450)
chr6 (321-404)||(6162698-6162776)
chr6 (321-360)||(19595659-19595698)
chr6 (321-359)||(15147759-15147797)
chr6 (302-360)||(19579193-19579251)
chr6 (321-359)||(20824605-20824643)
chr6 (266-299)||(34527713-34527746)
chr6 (321-357)||(15148159-15148195)
chr6 (321-361)||(20521225-20521265)
[»] scaffold0063 (2 HSPs)
scaffold0063 (247-404)||(35127-35281)
scaffold0063 (269-403)||(34794-34925)
[»] scaffold0933 (1 HSPs)
scaffold0933 (266-405)||(491-627)
[»] scaffold0085 (2 HSPs)
scaffold0085 (321-359)||(39862-39900)
scaffold0085 (321-359)||(39462-39500)
[»] scaffold0148 (2 HSPs)
scaffold0148 (321-357)||(29318-29354)
scaffold0148 (321-357)||(33004-33040)


Alignment Details
Target: chr5 (Bit Score: 350; Significance: 0; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 21 - 442
Target Start/End: Original strand, 38834488 - 38834892
Alignment:
Q  21 tatcatacaagacattttaaatattagatcataacaaggagattagcataagattaggaacaaacaaagtataactcagtagatgattccactgatatgg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38834488 tatcatacaagacattttaaatattagatcataacaaggagattagcataagattaggaacaaacaaagtataactcagtagatgattccactgatatgg 38834587  T
Q  121 ctgatataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtattgctagtaacatcaac 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38834588 ctgatataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtattgctagtaacatcaac 38834687  T
Q  221 attgaactttcttacggctttctaaccactaactagcacatcaatattccgttagagaattaacatcagagactaatttgataacagagatcaaatgtgt 320  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38834688 attgaactttcttacggctttataaccactaactagcacatcaatattccgttagagaattaacagcagagactaatttgataacagagatcaaatgtgt 38834787  T
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaattatcata 420  Q
    | ||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||| |||||||||||||||||||||||||    
T  38834788 gaattttaaaaacatttaatgaaatgtagggactat-----------------gcaaaacgtaaggactaaaaatatatttaacctataaaattatcata 38834870  T
Q  421 gtggctcccttcaagaataatc 442  Q
    ||||||||||||||||||||||    
T  38834871 gtggctcccttcaagaataatc 38834892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 257 - 405
Target Start/End: Original strand, 31588291 - 31588437
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  |||||||||||||||||||| ||| ||||||||| |||||| ||||| ||||||  |||||||||||| ||||||||||||||||||||||    
T  31588291 cacatcagcattccgttagagaattaacagcagggactaattttgataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggacta 31588390  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||   | |||||||| |||||||||||||||||||||||||    
T  31588391 ttcttcaaagg---ggacgcaaaatgtaaggactaaaaacatatttaacc 31588437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 404
Target Start/End: Original strand, 87196 - 87350
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||| |||||||| |||  ||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||    
T  87196 cactaactaccacatcaacattatgttagagaattaacaacaaagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaat 87295  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    ||||||||||||||||||||    | || |||||  |||||||||||||||||||||||    
T  87296 gtagggactattcttcaaag----ggacacaaaatataaggactaaaaacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 18999574 - 18999730
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||||||||||||||||||| ||  || |||||| ||||||| |||| ||||||| |||||||||||| |||||||||||    
T  18999574 ccactaactgccacatcatcattccgttagagaattaacaacaatgattaattttgataacaaagataaaatgtgaggattttaaaaatatttaatgaaa 18999673  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||| |||||||||||||||  || ||| |||||| |||||||||||||||||||||||||    
T  18999674 tgtatggactattcttcaaa--at-gaa-gcaaaatgtaaggactaaaaacatatttaacc 18999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 3935639 - 3935750
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| ||| |||||||||||||||| ||||||||||||| | ||||| |||| ||||||| |||||||||||||| ||||||||||||||||| ||    
T  3935639 cacatcaacatttcgttagagaattaacagcagagactaattttaataacaaagataaaatgtgaggattttaaaaacaattaatgaaatgtagggatta 3935738  T
Q  356 ttcttcaaagga 367  Q
    ||||||||||||    
T  3935739 ttcttcaaagga 3935750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 405
Target Start/End: Original strand, 8648000 - 8648155
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||| ||||||||| |||||||||| || |||||||||| |||||| ||||  ||||||| |||||||||||| ||||||||||||    
T  8648000 cactaactgccacatcaacattccgttaaagaattaacaacatagactaattttgataacggagaaaaaatgtgaggattttaaaaatatttaatgaaat 8648099  T
Q  346 gtagggactattctt-caaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||  |||||||||| ||||||     |||||||| ||||||||||||| |||||||||||    
T  8648100 gtaaagactattcttccaaagg-----acgcaaaatgtaaggactaaaatcatatttaacc 8648155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 30415418 - 30415573
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||| |||||||  |||||||| ||||||||||| | ||| ||||||| |||||| ||||  ||||||| |||||||||||||||| |||||||    
T  30415418 ccactaactatcacatcagcattccgttggagaattaacagctgagcctaattttgataacggagacaaaatgtgaggattttaaaaacatt-aatgaaa 30415516  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||||||||| ||||| || |    ||| ||||||||||||| |||||||||||    
T  30415517 tgtagggactattcttcgaaggagcgta----aaatgtaaggactaaaaccatatttaacc 30415573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 366
Target Start/End: Complemental strand, 18339229 - 18339108
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| |||||||||||||||||||| ||  ||||||||| ||| |  ||||| ||||||| ||||||||||||||||||||||||    
T  18339229 ccactaactgtcacatcaacattccgttagagaattaacagcatggactaattttgatgatggagataaaatgtgaggattttaaaaacatttaatgaaa 18339130  T
Q  345 tgtagggactattcttcaaagg 366  Q
    | ||| ||||||||||||||||    
T  18339129 tatagagactattcttcaaagg 18339108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 276 - 404
Target Start/End: Original strand, 8750324 - 8750449
Alignment:
Q  276 agaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacg 374  Q
    |||||||||| ||  ||||||||| |||||| ||||| |||| || |||||||||| ||||||||| ||||||||||||||||||||||||     ||||    
T  8750324 agaattaacaacatggactaattttgataacggagataaaatatgaggattttaaacacatttaataaaatgtagggactattcttcaaag----aaacg 8750419  T
Q  375 caaaacgtaaggactaaaaacatatttaac 404  Q
    ||||| ||||||||||||||||||||||||    
T  8750420 caaaatgtaaggactaaaaacatatttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 404
Target Start/End: Complemental strand, 16284419 - 16284275
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  |||||||||||||||||||| ||  ||||||||| |||||| ||||| |||| || |||||||||||||||||||| |||| ||  |||||    
T  16284419 cacatcagcattccgttagagaattaacaacaatgactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatataaagacta 16284320  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    |||||||||      ||||||||| ||||||||||||||||||||||||    
T  16284319 ttcttcaaa----aaaacgcaaaatgtaaggactaaaaacatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 405
Target Start/End: Complemental strand, 31176652 - 31176507
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    ||||||| |||||||||| ||| |||||| ||  ||||||||| |||||| | ||| |||| ||  ||||||||||||||||||||||||||| |||||     
T  31176652 cacatcagtattccgttaaagagttaacagcaaggactaattttgataacggggataaaatatgacgattttaaaaacatttaatgaaatgtatggactg 31176553  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||     ||||||||  ||||||||||||||||||||||||    
T  31176552 ttcttcaaaggg----acgcaaaatataaggactaaaaacatatttaacc 31176507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 364
Target Start/End: Original strand, 3406805 - 3406913
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||| |||||||||||| ||||||| | |||||||||| ||||||| |||| | || ||||    
T  3406805 cacatcaacattccgttagaaaattaatatcagggactaattttgataacagagataaaatgtgagaattttaaaaatatttaataaaatattggaacta 3406904  T
Q  356 ttcttcaaa 364  Q
    |||||||||    
T  3406905 ttcttcaaa 3406913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 364
Target Start/End: Complemental strand, 13987439 - 13987319
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggatttt-aaaaacatttaatgaa 343  Q
    |||||||||  |||||||  |||||||||||||||||||| |||||||||| ||| ||||| ||||| ||||||| | ||||| ||||||||||||||||    
T  13987439 ccactaactgtcacatcatcattccgttagagaattaacagcagagactaattttaataacggagataaaatgtgagaattttaaaaaacatttaatgaa 13987340  T
Q  344 atgtagggactattcttcaaa 364  Q
    || ||| || |||||||||||    
T  13987339 atatagagattattcttcaaa 13987319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 18999470 - 18999366
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 396  Q
    ||||||||| ||||| ||||| | |||||||||||| ||||||||||||||| |||||||||||||||     ||  |||||| ||||||||||||||||    
T  18999470 tttgataacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaa----agagtgcaaaatgtaaggactaaaaaca 18999375  T
Q  397 tatttaacc 405  Q
    |||||||||    
T  18999374 tatttaacc 18999366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 247 - 406
Target Start/End: Complemental strand, 35373603 - 35373453
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    |||||||||  |||||| ||||||||||||||||||||| ||| |||||| ||| ||||| | ||| |||| || |||||||||||| ||||||||||||    
T  35373603 cactaactactacatcagtattccgttagagaattaacagcagtgactaattttaataacggggataaaatatgaggattttaaaaatatttaatgaaat 35373504  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    ||||      ||||||||||    | || ||||| |||||||||||||| |||||||||||    
T  35373503 gtag------ttcttcaaag----ggacacaaaatgtaaggactaaaaatatatttaacct 35373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 361
Target Start/End: Complemental strand, 3406613 - 3406499
Alignment:
Q  248 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 346  Q
    |||||||  |||||||| |||| || | ||||||||||||||| | |||||| |||||||||||| |||| |  |||||||||||||||||||||||||     
T  3406613 actaactgccacatcaacattctgtgaaagaattaacatcagatattaattttgataacagagataaaatataaggattttaaaaacatttaatgaaata 3406514  T
Q  347 tagggactattcttc 361  Q
    || | ||||||||||    
T  3406513 tatgaactattcttc 3406499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 412
Target Start/End: Complemental strand, 15978544 - 15978382
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||| |||| |||||||||| ||  ||||||||| | |||| ||||| ||||||| |  |||||||||||||||||||||    
T  15978544 ccactaactgccacatcagcattctgttaaagaattaacaacaatgactaattttaataaccgagataaaatgtgag--ttttaaaaacatttaatgaaa 15978447  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 412  Q
    | ||| ||||||||||| ||  |   ||| |||||  |||||||||||||||||||||||||| ||||    
T  15978446 tatagagactattcttccaaaaa---aacacaaaatataaggactaaaaacatatttaacctaaaaaa 15978382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 405
Target Start/End: Complemental strand, 87107 - 87019
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||  ||||||||||||||||||||||||||||||  |||||||||   ||| ||||||||||  ||| ||||||||||||||||||||    
T  87107 aaatgtgaagattttaaaaacatttaatgaaatgtaggggttattcttca---gat-gaacgcaaaatataaagactaaaaacatatttaacc 87019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 35383377 - 35383292
Alignment:
Q  265 tattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtag 349  Q
    |||||||||||| |||||||| ||  ||||||||| |||||| | ||| |||| || |||||||||||||||||||||||||||||    
T  35383377 tattccgttagaaaattaacagcatggactaattttgataacggggataaaatatgaggattttaaaaacatttaatgaaatgtag 35383292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 22231170 - 22231250
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||    |  |||||||  ||||||||||||||||||||||||    
T  22231170 ggatttcaaaaacatttaatgaaatatagggactattctttaaag----gggcgcaaaatataaggactaaaaacatatttaacc 22231250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 119264 - 119184
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||  ||  ||||||||  ||||||| ||||||||||||||||    
T  119264 ggattttaaaaacatttattgaaatgtaaggactattctttaaag--tc--acgcaaaatctaaggaccaaaaacatatttaacc 119184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 364
Target Start/End: Complemental strand, 1650152 - 1650041
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaatt----tgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtaggga 352  Q
    |||||||| ||||||||| |||||||||| |||||| |||||    ||||||| ||||| |||| |  | |||||||||||||||||| ||||||||  |    
T  1650152 cacatcaacattccgttaaagaattaacaacagagattaattattttgataacggagataaaatataagaattttaaaaacatttaataaaatgtagata 1650053  T
Q  353 ctattcttcaaa 364  Q
     |||||||||||    
T  1650052 atattcttcaaa 1650041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 405
Target Start/End: Original strand, 18340661 - 18340740
Alignment:
Q  322 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||    |  ||||| | ||||||||||||| |||||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactattcttaaaag----gggcgcaacatgtaaggactaaaatcatatttaacc 18340740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 39402291 - 39402212
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  39402291 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 39402212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 412
Target Start/End: Complemental strand, 3191877 - 3191791
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 412  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||  ||||   |||||| ||| ||||||||||||||||||||| ||||||    
T  3191877 ggattttaaaaacatttattgaaatgtaaggactattc-tcaaa--atcg--tgcaaaatgtagggactaaaaacatatttaacccataaaa 3191791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 407
Target Start/End: Complemental strand, 21949479 - 21949398
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaaccta 407  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  || |||| ||| |||| ||||||||||||||||||    
T  21949479 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgtaaaatgtagggaccaaaaacatatttaaccta 21949398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 21949841 - 21949880
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21949841 ggattttaaaaacatttattgaaatgtagggactattctt 21949880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 405
Target Start/End: Original strand, 4187838 - 4187926
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||| |||||||||||| ||||| ||||||||| |||||||| || ||||  | |  ||||||| ||| |||||||||||||||||||||    
T  4187838 aaatgtgaggattttaaaaatatttattgaaatgtaaggactattatttaaag--ttg--cgcaaaatgtagggactaaaaacatatttaacc 4187926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 5747202 - 5747240
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5747202 ggattttaaaaacatttattgaaatgtagggactattct 5747240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 6543494 - 6543456
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6543494 ggattttaaaaacatttattgaaatgtagggactattct 6543456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 405
Target Start/End: Complemental strand, 8750089 - 8750010
Alignment:
Q  322 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||    |  ||||||| ||||| | |||||||||||||||||    
T  8750089 gattttaaaaatatttaatgaaatgtagggattattattcaaag----gggcgcaaaatgtaagaattaaaaacatatttaacc 8750010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 357
Target Start/End: Original strand, 14626077 - 14626135
Alignment:
Q  299 tgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||| |  ||||||  |||||||||||||||||| ||||||||||||||||||    
T  14626077 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 14626135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 19353079 - 19353159
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||  ||  || |||||  ||||||| ||||||||||||||||    
T  19353079 ggattttaaaaacatttattgaaatgtgaggactattcttcaaag--tc--acacaaaatctaaggaccaaaaacatatttaacc 19353159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 28641602 - 28641640
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28641602 ggattttaaaaacatttattgaaatgtagggactattct 28641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 31093437 - 31093516
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | |||||||||||||||||| ||||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  31093437 ggattttaaaaacattcattgaaatgtagggactatt-ttcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 31093516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 31162500 - 31162462
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  31162500 ggattttaaaaacatttattgaaatgtagggactattct 31162462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 404
Target Start/End: Original strand, 20892557 - 20892633
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    |||||||||||||||||| ||| |||| |||||||||||||| |     ||||||||  |||||| ||||||||||||||||    
T  20892557 attttaaaaacatttaattaaacgtagagactattcttcaaatg-----acgcaaaatttaaggattaaaaacatatttaac 20892633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 37813453 - 37813412
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  37813453 attttaaaaacacttaatgaaatgtatggactattcttcaaa 37813412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 119794 - 119838
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||    
T  119794 ggattttaaaaacatttattgaaatgcaaggactattcttcaaag 119838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 3935518 - 3935451
Alignment:
Q  271 gttagagaattaacatcagagactaat-ttgataacagagatcaaatgtgtggattttaaaaacatttaat 340  Q
    |||||||||||||||   ||||||||| |||||||  ||||| ||||||| ||||||||||||||||||||    
T  3935518 gttagagaattaaca---gagactaatattgataatggagataaaatgtgaggattttaaaaacatttaat 3935451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 4186834 - 4186790
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  4186834 ggatattaaaaacatttattgaaatgtaggtactattcttcaaag 4186790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 19352551 - 19352507
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||    
T  19352551 ggattttaaaaacatttattgaaatgcaaggactattcttcaaag 19352507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 30351716 - 30351760
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaagga 367  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  30351716 attttaaaaatatttattgaaatgtagggactattctttaaagga 30351760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 335
Target Start/End: Complemental strand, 29751802 - 29751724
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacat 335  Q
    |||||||| ||||||||||||||||||   ||| |||||| ||||||||| ||||| ||||||| | |||||||||||||    
T  29751802 cacatcaacattccgttagagaattaagcgcagggactaattttgataac-gagataaaatgtgagaattttaaaaacat 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 335
Target Start/End: Complemental strand, 29752468 - 29752390
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacat 335  Q
    |||||||| ||||||||||||||||||   ||| |||||| ||||||||| ||||| ||||||| | |||||||||||||    
T  29752468 cacatcaacattccgttagagaattaagcgcagggactaattttgataac-gagataaaatgtgagaattttaaaaacat 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 3192241 - 3192279
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  3192241 ggattttaaaaacatttattgaaatgtaaggactattct 3192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 6543856 - 6543894
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  6543856 ggattttaaaaacatttattgaaatgtagggattattct 6543894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 28641240 - 28641202
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  28641240 ggattttaaaaacatttattgaaatgtagggattattct 28641202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 18339409 - 18339446
Alignment:
Q  248 actaactagcacatcaatattccgttagagaattaaca 285  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18339409 actaactatcacatcaatatttcgttagagaattaaca 18339446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 119090 - 119054
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  119090 ggattttaaaaacatttattgaaatgtaaggactatt 119054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 119968 - 120004
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  119968 ggattttaaaaacatttattgaaatgtaaggactatt 120004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 3406695 - 3406731
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  3406695 ggattttaaaaacatttattgaaatgtaaggactatt 3406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 19353240 - 19353284
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||| |||||||||||||| |||| ||||||||| ||||||||    
T  19353240 aaatgtatggattttaaaaacgtttattgaaatgtaaggactatt 19353284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 3e-86; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 12389684 - 12389461
Alignment:
Q  29 aagacattttaaatattagatcataacaaggagattagcataagattaggaacaaacaaagtataa---ctcagtagatgattccactgatatggctgat 125  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||||||||||||||||||||| ||    
T  12389684 aagactttttaaatattagatcataacaaggagattagcataagattaggaacaaacaaagtataataactcaccagatgattccactgatatggctaat 12389585  T
Q  126 ataagaggaccatatactgatttatttggtagagactgt-gtcccttttccagcccagtacaagcagatctccaaggtattgctagtaacatcaacattg 224  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  12389584 ataagaggaccatatactgatttatttggtagagacttttgtcccttttccaccccaatacaagcagatctccaaggtatcactagtaacatcaacattg 12389485  T
Q  225 aactttcttacggctttctaacca 248  Q
    ||||||||||||||||||| ||||    
T  12389484 aactttcttacggctttcttacca 12389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 405
Target Start/End: Original strand, 6751288 - 6751444
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||| ||||| |||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||||| ||||||||||||    
T  6751288 cactaactgtcacatcaacattccattagagaattaacagcagagactaattttgataacaaagataaaatgtgaggattttaaaaaaatttaatgaaat 6751387  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||| ||||| ||||| |||||   ||   ||||| |||| ||||||||||||||||||||    
T  6751388 gtaaggacttttctttaaagg---gacgccaaaatgtaatgactaaaaacatatttaacc 6751444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 405
Target Start/End: Complemental strand, 5172899 - 5172745
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||| |||||||| ||||  |||||||||||||| ||  |||||| |||||||||  |||| ||||||  |||||||||||||||||||||||||    
T  5172899 cactaacta-cacatcaacattctattagagaattaacaacaaggactaaatttgataacgtagataaaatgtaaggattttaaaaacatttaatgaaat 5172801  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||| ||||||||||||||     || ||||||| ||||| |||||||||||||||||||    
T  5172800 gtagagactattcttcaaa----tgagcgcaaaatgtaagaactaaaaacatatttaacc 5172745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 405
Target Start/End: Complemental strand, 9880610 - 9880484
Alignment:
Q  276 agaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacg 374  Q
    |||||||||| ||| ||||||||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    | | |    
T  9880610 agaattaacaacagtgactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaag----ggatg 9880515  T
Q  375 caaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||| |||||||||||||||||||||||||    
T  9880514 caaaatgtaaggactaaaaacatatttaacc 9880484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 257 - 405
Target Start/End: Complemental strand, 19895545 - 19895400
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  ||||||||| ||||||||||  | |||||||||| |||||| ||||| ||||||| || ||||||||||||||||| ||||||| ||||||    
T  19895545 cacatcagcattccgttaaagaattaacagtatagactaattttgataacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggacta 19895446  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||    ||| |  |||| |||||||||||||||||||||||||    
T  19895445 ttcttcaaa----cgagcataaaatgtaaggactaaaaacatatttaacc 19895400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 257 - 405
Target Start/End: Original strand, 31436328 - 31436473
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  |||||||||||||||||||| ||||||||||||| |||||| ||||| |||||||   |||||||||||||||||| |||| ||| |||||    
T  31436328 cacatcatcattccgttagagaattaacagcagagactaattttgataacggagataaaatgtgataattttaaaaacatttaataaaatatagtgacta 31436427  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||     | || ||||| ||||||||||||| |||||||||||    
T  31436428 ttcttcaaa----aggacacaaaatgtaaggactaaaatcatatttaacc 31436473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 3591271 - 3591427
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttg-ataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||||||||||| |||| ||| ||| |||||||||  ||||  ||||| ||||||| |||||||||||||||||||| |||    
T  3591271 ccactaactgccacatcaggattccgttagataatttacagcagggactaatttttataatggagataaaatgtgaggattttaaaaacatttaataaaa 3591370  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||| |||||||||||||||     || ||||||| |||||||||||||| ||||||||||    
T  3591371 tgtatggactattcttcaaa----tgagcgcaaaatgtaaggactaaaaatatatttaacc 3591427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 405
Target Start/End: Original strand, 9880744 - 9880880
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||| | |||||||||||||||||| |||| |||  |||||||||||||    
T  9880744 attccgttagagaattaacagcagggactaattttgataacagagataaaatgtgagaattttaaaaacatttaataaaatatagaaactattcttcaaa 9880843  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
         || ||||||| ||||| | |||||||||||||||||    
T  9880844 ----tgagcgcaaaatgtaagaattaaaaacatatttaacc 9880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 50359269 - 50359165
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| |||||||||||||||||||| ||||| ||||||| |||||| || || |||||||  ||||| ||||||||||||||||||||||||||||    
T  50359269 cacatcaacattccgttagagaattaacagcagag-ctaattttgataacggaaataaaatgtgaagatttaaaaaacatttaatgaaatgtagggacta 50359171  T
Q  356 ttcttc 361  Q
    ||||||    
T  50359170 ttcttc 50359165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 266 - 406
Target Start/End: Complemental strand, 5683297 - 5683160
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||| ||||||||| ||||| ||| ||||||||| |||||   |||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  5683297 attctgttagagaaataacagcagggactaattttgataatgaagataaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaa 5683198  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    |      |||||||| ||||||| ||||||||||||||||||    
T  5683197 g----agacgcaaaatgtaaggattaaaaacatatttaacct 5683160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 266 - 365
Target Start/End: Original strand, 18180232 - 18180332
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||||||||||||||||||| ||  ||||||||| |||||| ||||| |||| || |||||||||||||||||||| ||||||| |||||||||||||||    
T  18180232 attccgttagagaattaacaccactgactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattcttcaaa 18180331  T
Q  365 g 365  Q
    |    
T  18180332 g 18180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 5683495 - 5683614
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||| || ||||||||||| |||||||| ||| ||||||||| |||| | ||||| ||||  | |||||||||||| |||||||||||    
T  5683495 ccactaactgtcacattaacattccgttagaaaattaacagcagtgactaattttgataccggagataaaatacgaggattttaaaaatatttaatgaaa 5683594  T
Q  345 tgtagggactattcttcaaa 364  Q
    ||||||||||||||||||||    
T  5683595 tgtagggactattcttcaaa 5683614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 248 - 366
Target Start/End: Complemental strand, 47541672 - 47541553
Alignment:
Q  248 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 346  Q
    |||||||  |||||||  |||||||||||||||||||| ||| || |||||| |||||   | || ||||||| |||||||||||||||||||||||||     
T  47541672 actaactgccacatcagcattccgttagagaattaacaacagggattaattttgataatgaatataaaatgtgaggattttaaaaacatttaatgaaata 47541573  T
Q  347 tagggactattcttcaaagg 366  Q
    ||||||||||||||||||||    
T  47541572 tagggactattcttcaaagg 47541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 364
Target Start/End: Original strand, 19895735 - 19895853
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||| |||| ||||||||||||||| || |||||||||| ||||||  |||| |||| || | |||||||||||||||||| ||||    
T  19895735 cactaactgtcacatcaacattctgttagagaattaacaacaaagactaattttgataacgaagataaaatatgagaattttaaaaacatttaataaaat 19895834  T
Q  346 gtagggactattcttcaaa 364  Q
    |||| ||||||||||||||    
T  19895835 gtagagactattcttcaaa 19895853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 48155233 - 48155368
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||||||| |||||||||| ||  ||||||||| ||||||| |||| |||||||  |||||||||||||||||||||||| |||| || ||||||||||    
T  48155233 attccgttaaagaattaacaacaaggactaattttgataacatagataaaatgtgaagattttaaaaacatttaatgaaatataggaacaattcttcaaa 48155332  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    |    || |||||||  |||||| ||||||||||||||||    
T  48155333 g----gagcgcaaaatataaggattaaaaacatatttaac 48155368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 405
Target Start/End: Complemental strand, 18180024 - 18179879
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  ||||||||||| ||||| ||  |||||||||||| |||||| ||||| ||||||| |||||||||||||| |||||||||| || ||||||    
T  18180024 cacatcagcattccgttagaaaattagcagtagagactaattttgataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggacta 18179925  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    || |||||||    |   |||||| ||||||||||||||||| |||||||    
T  18179924 tttttcaaag----gggtgcaaaatgtaaggactaaaaacatgtttaacc 18179879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 364
Target Start/End: Original strand, 50359384 - 50359492
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  ||||||||| |||  ||| | ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||  | ||||||    
T  50359384 cacatcagcattccgttaaagacataaaagcagagactaattttgataacagagataaaatgtgaggattttaaaaacatttaatgaaataaaaggacta 50359483  T
Q  356 ttcttcaaa 364  Q
    |||||||||    
T  50359484 ttcttcaaa 50359492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 1500991 - 1501071
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||     || |||||||  || |||||||||||||||||||||    
T  1500991 ggattttaaaaacatttaatgaaatgtagggactattcttcaaa----agagcgcaaaatatagggactaaaaacatatttaacc 1501071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 4288374 - 4288525
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| ||||||||| |||||||||| ||  || |||||| ||||||  | || ||||||| |||||||||||||||||     ||    
T  4288374 ccactaactgacacatcaacattccgttaaagaattaacagcatggattaattttgataacgaatataaaatgtgaggattttaaaaacattt-----aa 4288468  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||    |  |||||||  ||||||||||||||||||||||||    
T  4288469 tgtagggactattcttcaaag----gggcgcaaaatataaggactaaaaacatatttaacc 4288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 403
Target Start/End: Complemental strand, 19976309 - 19976166
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    ||||||||||||  |||||| |||||||| ||  || |||||| ||||| |||||| ||||||| |||||||||||||||||||| |||  || | ||||    
T  19976309 cacatcaatattttgttagataattaacaacaaggattaattttgataatagagataaaatgtggggattttaaaaacatttaataaaaaataagaacta 19976210  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 403  Q
    ||||||||||     | ||||||| |||| ||||||||||||||||||    
T  19976209 ttcttcaaag----aagcgcaaaatgtaacgactaaaaacatatttaa 19976166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 365
Target Start/End: Complemental strand, 6751183 - 6751083
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||| ||||||||||||||||| | ||||||||| |||||| ||||| ||||| |  |||||| ||||||||||||||||| || ||| |||||||||||    
T  6751183 attctgttagagaattaacatcggggactaattttgataacggagataaaatgcgatgatttttaaaacatttaatgaaatataaggattattcttcaaa 6751084  T
Q  365 g 365  Q
    |    
T  6751083 g 6751083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 48155129 - 48155014
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| | ||||||| ||| |||| | |||||| |||||| |||| | ||||| |||| || |||||||||||||||||||| |||    
T  48155129 ccactaactgtcacatcaacaatccgttacagacttaagagcagagattaattttgatatcggagataaaatatgaggattttaaaaacatttaataaaa 48155030  T
Q  345 tgtagggactattctt 360  Q
    |||| |||||||||||    
T  48155029 tgtaaggactattctt 48155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 405
Target Start/End: Complemental strand, 45664775 - 45664687
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||| |||||||||||||||||| | |||||||| ||||||||||||||     || || |||| ||| |||||||||||||||||||||    
T  45664775 aaatgtggggattttaaaaacatttattaaaatgtagagactattcttcaaa----tgagcgtaaaatgtagggactaaaaacatatttaacc 45664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 367
Target Start/End: Original strand, 12869664 - 12869710
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 367  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  12869664 ggattttaaaaacatttattgaaatgtagggactattctttaaagga 12869710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 36793584 - 36793664
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| | |||||||| |||||||||||||||  ||  ||||||||  || |||||||||||||||||||||    
T  36793584 ggattttaaaaacatttattaaaatgtagagactattcttcaaag--tc--acgcaaaatatagggactaaaaacatatttaacc 36793664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 1500139 - 1500100
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  1500139 ggattttaaaaacattcaatgaaatgtagggactattctt 1500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 3591174 - 3591255
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||  ||  ||||| || ||| |||| |||||||||||||||||    
T  3591174 ggattttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcacaatgtagggaccaaaaacatatttaacct 3591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 8997420 - 8997382
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  8997420 ggattttaaaaacatttattgaaatgtagggactattct 8997382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 17968116 - 17968037
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  17968116 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 17968037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 32266562 - 32266524
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  32266562 ggattttaaaaacatttattgaaatgtagggactattct 32266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 40124155 - 40124117
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  40124155 ggattttaaaaacatttattgaaatgtagggactattct 40124117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 45230571 - 45230650
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  45230571 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 45230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 47410502 - 47410464
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47410502 ggattttaaaaacatttattgaaatgtagggactattct 47410464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 47410864 - 47410902
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47410864 ggattttaaaaacatttattgaaatgtagggactattct 47410902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 47541769 - 47541851
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacattta 338  Q
    |||||||| ||||||||  | |||||||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||||    
T  47541769 cacatcaacattccgtttaataattaacaacaaggactaattttgataacggagataaaatgtgaggattttaaaaacattta 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 9122764 - 9122726
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  9122764 ggattttaaaaacatttattgaaatgtaaggactattct 9122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 9123126 - 9123164
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  9123126 ggattttaaaaacatttattgaaatgtagagactattct 9123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 367
Target Start/End: Complemental strand, 12868513 - 12868467
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 367  Q
    |||||||||||| ||||| ||||||||||| ||||||||| ||||||    
T  12868513 ggattttaaaaatatttattgaaatgtaggaactattctttaaagga 12868467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 32266924 - 32266962
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  32266924 ggattttaaaaacatttattgaaatgtagggattattct 32266962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 40124517 - 40124555
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  40124517 ggattttaaaaacatttattgaaatgtagggattattct 40124555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 46802401 - 46802363
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  46802401 ggattttaaaaacttttattgaaatgtagggactattct 46802363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 42723200 - 42723284
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaat 340  Q
    |||||||  ||||| ||||| |||||||| || | |||||||| | |||| || || ||||||| ||||||||||||||||||||    
T  42723200 cacatcagcattccattagataattaacaacataaactaattttgctaacggatataaaatgtgaggattttaaaaacatttaat 42723284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 46802763 - 46802799
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| | ||||||||||||||||    
T  46802763 ggattttaaaaacatttattaaaatgtagggactatt 46802799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 51906753 - 51906909
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| |||||||||||||||||||| |||| |||||||| |||||| ||||| ||||||| |||||||||||||||||||||| |    
T  51906753 ccactaactctcacatcaacattccgttagagaattaacagcagaaactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaga 51906852  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||    || ||||||| |||||||||||||||||||||||||    
T  51906853 tgtagggactattcttcaaag----gagcgcaaaatgtaaggactaaaaacatatttaacc 51906909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 29691681 - 29691525
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| ||||| ||||||||||||||  |||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  29691681 ccactaactgtcacatcaacattccattagagaattaacagtagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 29691582  T
Q  345 tgtagggactattcttcaaa-ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||| ||||     ||||||  ||||||||||||||||||||||||    
T  29691581 tgtagggactattcttcaaatggat-----gcaaaatataaggactaaaaacatatttaacc 29691525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 246 - 404
Target Start/End: Complemental strand, 3296700 - 3296544
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagag-actaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaa 343  Q
    |||||||||  ||| |||||||||||||| |||||||||||||| | |||||||| |||||| ||||| ||||||| |||||||||||||||||||||||    
T  3296700 ccactaactgccacgtcaatattccgttaaagaattaacatcaggggactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaa 3296601  T
Q  344 atgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    ||||||||| ||||||||||||    |  ||||||| ||||||||||||||||||||||||    
T  3296600 atgtagggaatattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 51906576 - 51906420
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||||||||||||| ||| |||||||||| ||||||||| |||||| ||||| ||||||| |||| |||||||||||||||||||    
T  51906576 ccactaactgtcacatcaatattccgttaaagagttaacatcagggactaattttgataacggagataaaatgtgaggatattaaaaacatttaatgaaa 51906477  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
     ||||||||||||||||||||       ||||||| |||| ||||||||||||||||||||    
T  51906476 cgtagggactattcttcaaag----aggcgcaaaatgtaaagactaaaaacatatttaacc 51906420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 3296878 - 3297034
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||| ||||||| ||||| ||||| ||||||||| |||||| ||||| ||||||  ||||||||||||||||||||||||    
T  3296878 ccactaactgccacatcagcattctgttagaggattaatatcagggactaattttgataacggagataaaatgtaaggattttaaaaacatttaatgaaa 3296977  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
     ||||||||||||||||||||| |    ||||||| |||||||||||||| ||||||||||    
T  3296978 cgtagggactattcttcaaagggt----cgcaaaatgtaaggactaaaaatatatttaacc 3297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 364
Target Start/End: Complemental strand, 30608401 - 30608282
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||||||||| | ||||||||||||| | ||||||||||||| |||||| ||||| ||||||| |||||||||||| || ||||||||    
T  30608401 ccactaactgccacatcaatatcctgttagagaattaatagcagagactaattttgataacggagataaaatgtgaggattttaaaaatatataatgaaa 30608302  T
Q  345 tgtagggactattcttcaaa 364  Q
    ||||||||||||||||||||    
T  30608301 tgtagggactattcttcaaa 30608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 248 - 405
Target Start/End: Complemental strand, 48554050 - 48553896
Alignment:
Q  248 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 346  Q
    |||||||  |||||||  ||||||||| |||||||||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||  ||||||||||||    
T  48554050 actaactgtcacatcagcattccgttaaagaattaacaacaatgactaattttgataacggagataaaatgtgaggattttaaaaaggtttaatgaaatg 48553951  T
Q  347 tagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    || |||||||||||||||||     |||||||| ||||||||||||||| |||||||||    
T  48553950 tatggactattcttcaaaggg----acgcaaaatgtaaggactaaaaacgtatttaacc 48553896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 267 - 406
Target Start/End: Original strand, 35166821 - 35166957
Alignment:
Q  267 ttccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||  |||| |||| ||| |||    
T  35166821 ttccgttagagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgctgggattatttttcgaag 35166920  T
Q  366 gatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
        | |||||||| ||||| |||||| |||||||||||||    
T  35166921 ----ggacgcaaaatgtaagcactaaagacatatttaacct 35166957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 257 - 364
Target Start/End: Original strand, 34129245 - 34129353
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  |||||||| ||||||||||| |   ||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  34129245 cacatcagcattccgttggagaattaacagcttggactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaatgtagggacta 34129344  T
Q  356 ttcttcaaa 364  Q
    |||||||||    
T  34129345 ttcttcaaa 34129353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 273 - 405
Target Start/End: Original strand, 7118125 - 7118254
Alignment:
Q  273 tagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcga 371  Q
    ||||||||||||| ||  ||||||||| |||||  ||||| |||| || | |||||||||||||||||||||||||| ||||||||||||||||    |     
T  7118125 tagagaattaacagcatggactaattttgataatggagataaaatttgagaattttaaaaacatttaatgaaatgtatggactattcttcaaag----gg 7118220  T
Q  372 acgcaaaacgtaaggactaaaaacatatttaacc 405  Q
     ||||||| |||||||||||||||||||||||||    
T  7118221 gcgcaaaatgtaaggactaaaaacatatttaacc 7118254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 413
Target Start/End: Original strand, 29691846 - 29692011
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||| ||||||||  ||||||||||||||||||  ||  ||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||    
T  29691846 ccactaactaccacatcaacgttccgttagagaattaaccgcatggactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaa 29691945  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa-cctataaaat 413  Q
    | ||   |||||| |||||||    || || |||| | || |||||||||||||||||| ||||||||||    
T  29691946 tataaaaactattattcaaag----gagcgtaaaatgcaaagactaaaaacatatttaatcctataaaat 29692011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 266 - 365
Target Start/End: Original strand, 30608587 - 30608687
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||||||| | |||||||| ||| ||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  30608587 attccgttaaataattaacaacagtgactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaa 30608686  T
Q  365 g 365  Q
    |    
T  30608687 g 30608687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 26168148 - 26168034
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||| |||||||||||| ||||||| |||    
T  26168148 ccactaactgtcacatcagcattccgttagagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaatatttaat-aaa 26168050  T
Q  345 tgtagggactattctt 360  Q
    |||||  |||||||||    
T  26168049 tgtagaaactattctt 26168034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 366
Target Start/End: Original strand, 30047961 - 30048071
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| ||||||||||| |||||||| ||||||||||||| | |||| ||||| |||| || |||||||||||| ||||||||||||||| | |||     
T  30047961 cacatcaacattccgttagataattaacaacagagactaattttaataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactg 30048060  T
Q  356 ttcttcaaagg 366  Q
    |||||||||||    
T  30048061 ttcttcaaagg 30048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 366
Target Start/End: Original strand, 30062302 - 30062412
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| ||||||||||| |||||||| ||||||||||||| | |||| ||||| |||| || |||||||||||| ||||||||||||||| | |||     
T  30062302 cacatcaacattccgttagataattaacaacagagactaattttaataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactg 30062401  T
Q  356 ttcttcaaagg 366  Q
    |||||||||||    
T  30062402 ttcttcaaagg 30062412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 366
Target Start/End: Original strand, 56106406 - 56106516
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| |||  ||||||||||||||||||| ||||||||| | |||| ||||| ||||| | |||||||||||||||||||| |||| |||| ||||    
T  56106406 cacatcaacattatgttagagaattaacatcagggactaattttaataacggagataaaatgagaggattttaaaaacatttaataaaatataggaacta 56106505  T
Q  356 ttcttcaaagg 366  Q
    |||||||||||    
T  56106506 ttcttcaaagg 56106516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 30952946 - 30953051
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| |||| ||||||||||||||| ||  ||||||||| | |||| ||||| ||||||  ||||||||||||||||||||||||||||||||| |    
T  30952946 cacatcaacattctgttagagaattaacaacaaggactaattttaataaccgagataaaatgttaggattttaaaaacatttaatgaaatgtagggacca 30953045  T
Q  356 ttcttc 361  Q
    ||||||    
T  30953046 ttcttc 30953051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 405
Target Start/End: Complemental strand, 41510200 - 41510068
Alignment:
Q  270 cgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggat 368  Q
    |||||||||||||||| ||| ||||||||| |||||  ||||| |||| || |||||||| ||| ||||||| ||||||||||||||||||||||||       
T  41510200 cgttagagaattaacaacagtgactaattttgataagggagataaaatatgaggattttagaaatatttaataaaatgtagggactattcttcaaag--- 41510104  T
Q  369 cgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
     |  ||||||| ||||||| |||||| ||||||||||    
T  41510103 -gggcgcaaaatgtaaggattaaaaatatatttaacc 41510068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 266 - 365
Target Start/End: Complemental strand, 1791284 - 1791184
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||||||||||||||||||| ||  ||||||||| ||||||||  || || | || ||||||| |||||||||||||||||||| |||||||||||||||    
T  1791284 attccgttagagaattaacaacatcgactaattttgataacaggtataaagtttgaggatttttaaaacatttaatgaaatgtatggactattcttcaaa 1791185  T
Q  365 g 365  Q
    |    
T  1791184 g 1791184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 247 - 366
Target Start/End: Original strand, 1791483 - 1791603
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||| |||| ||||||||||||||| |||||||||| ||| ||||| ||||| ||||||   ||||||||||||||||||| ||||    
T  1791483 cactaactgccacatcaacattcagttagagaattaacagcagagactaattttaataacggagataaaatgtaaagattttaaaaacatttaataaaat 1791582  T
Q  346 gtagggactattcttcaaagg 366  Q
    ||  | |||||| ||||||||    
T  1791583 gtgagaactatttttcaaagg 1791603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 48760049 - 48760168
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||| || ||||| | |||||||||||| ||  || |||||| |||||||||||| |||||||  ||||||||||||||||||||||     
T  48760049 ccactaactgccacattaacattccttcagagaattaacaacatggattaattttgataacagagataaaatgtgaagattttaaaaacatttaatgaat 48760148  T
Q  345 tgtagggactattcttcaaa 364  Q
    |||| | |||||||||||||    
T  48760149 tgtacgaactattcttcaaa 48760168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 366
Target Start/End: Complemental strand, 34129127 - 34129029
Alignment:
Q  269 ccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagg 366  Q
    ||||||||||||||||| || ||||||| |||||||||  |||| |||| || | ||||||||||| |||||| |||| ||||||||||||||||||||    
T  34129127 ccgttagagaattaacaacatagactaactttgataacgaagataaaatatgagaattttaaaaacgtttaataaaatatagggactattcttcaaagg 34129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 364
Target Start/End: Complemental strand, 5544940 - 5544821
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| ||||||||| | ||||||||  |  ||||||||||| |||  ||||| ||||||| | |||||||||| |||||||||||    
T  5544940 ccactaactgccacatcaacattccgttaaaaaattaacagtatggactaatttgaataaaggagataaaatgtgagaattttaaaaatatttaatgaaa 5544841  T
Q  345 tgtagggactattcttcaaa 364  Q
    | |||| |||||||||||||    
T  5544840 tataggaactattcttcaaa 5544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 38759807 - 38759740
Alignment:
Q  298 ttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||| ||||| |||| || ||||||||||||||||||||||||||||  |||||||||||||||    
T  38759807 ttgataacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattcttcaaag 38759740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 54142405 - 54142325
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||  |||  ||||||| ||| ||||||| |||||||||||||    
T  54142405 ggattttaaaaacatttattgaaatgtatggactattcttcaaag--tcg--cgcaaaatgtagggactaataacatatttaacc 54142325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 26984245 - 26984180
Alignment:
Q  300 gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||| ||||| ||||||| |||||||||||||||||||| || | |||||||||||||||||||    
T  26984245 gataactgagataaaatgtgaggattttaaaaacatttaataaagtctagggactattcttcaaag 26984180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 10580120 - 10580039
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||  ||  |||||||| ||| |||| |||||||||||||||||    
T  10580120 ggattttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcaaaatgtatggaccaaaaacatatttaacct 10580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 17288383 - 17288463
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| |||||||||||||||||| |||||||     | ||||||| ||| ||||||| |||||||||||||    
T  17288383 ggattttaaaaacatttattgaaatgtagggactattattcaaag----tagcgcaaaatgtagggactaataacatatttaacc 17288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 12108280 - 12108337
Alignment:
Q  302 taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||  ||||||  |||||||||||||||||| ||||||||||||||||||||    
T  12108280 taacagagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 12108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 404
Target Start/End: Original strand, 26168378 - 26168483
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtag--ggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaa 394  Q
    |||||||||| |||| |||||||  ||||||| ||||||||||| ||||||||  |||||||||| |||||    |  ||||||| ||||||| ||||||    
T  26168378 tttgataacaaagataaaatgtggagattttagaaacatttaataaaatgtaggaggactattctacaaag----gggcgcaaaatgtaaggattaaaaa 26168473  T
Q  395 catatttaac 404  Q
    ||||||||||    
T  26168474 catatttaac 26168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 54143511 - 54143555
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  54143511 ggattttaaaaacatttattaaaatgtagggactattcttcaaag 54143555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 1791389 - 1791466
Alignment:
Q  325 tttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    |||||||||||||| ||||||||| |||||||| |||||||  ||  |||||||||||| || | |||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcaaaacgtaggggccaaaaacatatttaacct 1791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 25916969 - 25917091
Alignment:
Q  245 accactaactagcacatcaatattccgttagagaattaacatcagagactaatttg-ataacag--agatcaaatgtgtggattttaaaaacatttaatg 341  Q
    ||||||||||  |||||||  ||| |||||||||||||| | |||| ||||||||  ||||||   |||| |||| ||   |||||||||||||||||||    
T  25916969 accactaactgtcacatcagcatttcgttagagaattaaaagcagacactaattttcataacacgaagataaaatatgaaaattttaaaaacatttaatg 25917068  T
Q  342 aaatgtagggactattcttcaaa 364  Q
    ||||||| ||| |||||||||||    
T  25917069 aaatgtatggattattcttcaaa 25917091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 40841541 - 40841502
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40841541 ggattttaaaaacatttattgaaatgtagggactattctt 40841502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 40841903 - 40841942
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40841903 ggattttaaaaacatttattgaaatgtagggactattctt 40841942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 55347979 - 55348018
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  55347979 ggattttaaaaacatttattgaaatgtagggactattctt 55348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 2669086 - 2669048
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2669086 ggattttaaaaacatttattgaaatgtagggactattct 2669048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 2669448 - 2669486
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2669448 ggattttaaaaacatttattgaaatgtagggactattct 2669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 12922721 - 12922683
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  12922721 ggattttaaaaacatttattgaaatgtagggactattct 12922683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 28957752 - 28957790
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28957752 ggattttaaaaacatttattgaaatgtagggactattct 28957790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 34294529 - 34294488
Alignment:
Q  322 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  34294529 gattttaaaaacatttaatgaaatgta-ggactattcttcaaa 34294488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 38026117 - 38026155
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  38026117 ggattttaaaaacatttattgaaatgtagggactattct 38026155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 43979999 - 43980078
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  43979999 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 43980078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 54167574 - 54167494
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| |||||| || ||||||||||| |||  |||  |||||||| ||| ||||| |||||||||||||||    
T  54167574 ggattttaaaaacatttattgaaatataaggactattcttgaaa--atc--acgcaaaatgtagggacttaaaacatatttaacc 54167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 363
Target Start/End: Original strand, 35469016 - 35469115
Alignment:
Q  265 tattccgttagagaattaacatcagagactaattt-gataacagagatcaaa-tgtgtggattttaaaaacatttaatgaaatgtagggactattcttca 362  Q
    |||||||||| |||||||||| ||  || |||||| |||||| ||||| ||| | || ||||||||||||| |||||||||||||| ||| |||||||||    
T  35469016 tattccgttaaagaattaacaacatggattaattttgataacggagataaaaatttgaggattttaaaaac-tttaatgaaatgtaaggattattcttca 35469114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 21235472 - 21235507
Alignment:
Q  322 gattttaaaaacatttaatgaaatgtagggactatt 357  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21235472 gattttaaaaacatttattgaaatgtagggactatt 21235507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 28505288 - 28505250
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  28505288 ggattttaaaaacatttattgaaatgtaaggactattct 28505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 28957390 - 28957352
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  28957390 ggattttaaaaacatttattgaaatgtagggattattct 28957352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 31227958 - 31227920
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  31227958 ggattttaaaaacatttattgaaatgtagggattattct 31227920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 31228320 - 31228358
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  31228320 ggattttaaaaacatttattgaaatgtaggaactattct 31228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 48759942 - 48759813
Alignment:
Q  270 cgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggat 368  Q
    ||||||| |||||||  |||| |||||||| ||  |||||||| ||||||| | |||||||||||||||||| ||| ||| |||||||| ||||||        
T  48759942 cgttagaaaattaacggcagaaactaattttgacgacagagataaaatgtgagaattttaaaaacatttaat-aaaagtaaggactatt-ttcaaa---- 48759849  T
Q  369 cgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
     || || |||| |||| |||||||||||||||||||    
T  48759848 tgagcgtaaaatgtaacgactaaaaacatatttaac 48759813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 54168833 - 54168913
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||| ||||| | ||||||||||| ||||||||||||  ||  ||||||||  || ||| |||||||||||||||||    
T  54168833 ggattttaaaaatatttattaaaatgtagggattattcttcaaag--tc--acgcaaaatatagggattaaaaacatatttaacc 54168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 55347640 - 55347602
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  55347640 ggattttaaaaacatttattaaaatgtagggactattct 55347602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 405
Target Start/End: Complemental strand, 1791354 - 1791321
Alignment:
Q  372 acgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||| |||||||||||||||||||||||||    
T  1791354 acgcaaaatgtaaggactaaaaacatatttaacc 1791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 5545119 - 5545199
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggatttt 327  Q
    ||||||||| ||| ||| | ||| ||||||||||||||| || ||||||| ||||||||| ||||| ||||||| |||||||    
T  5545119 cactaactatcacttcagtgttctgttagagaattaacaaca-agactaattttgataacggagataaaatgtgaggatttt 5545199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 405
Target Start/End: Original strand, 1317504 - 1317581
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||| | |||||||||||||||||| ||||||  ||||  ||||||| ||| | || ||||||||||||||||    
T  1317504 attttaaaaacattcattgaaatgtagggactatt-ttcaaa--atcg--cgcaaaatgtaggaaccaaaaacatatttaacc 1317581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 3296793 - 3296753
Alignment:
Q  325 tttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  3296793 tttaaaaacatttattaaaatgtaaggactattcttcaaag 3296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 405
Target Start/End: Complemental strand, 19310819 - 19310787
Alignment:
Q  373 cgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||| |||||||||||||||||||||||||    
T  19310819 cgcaaaatgtaaggactaaaaacatatttaacc 19310787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 21235107 - 21235071
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  21235107 ggattttaaaaacatttattgaaatgtaaggactatt 21235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 35166708 - 35166748
Alignment:
Q  325 tttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactattcttcaaag 35166748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 47053841 - 47053805
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  47053841 ggattttaaaaacatttattgaaatgtaaggactatt 47053805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 4e-42; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 64 - 215
Target Start/End: Complemental strand, 31422193 - 31422042
Alignment:
Q  64 tagcataagattaggaacaaacaaagtataactcagtagatgattccactgatatggctgatataagaggaccatatactgatttatttggtagagactg 163  Q
    |||||||||||||| ||    ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  31422193 tagcataagattagtaaggttcaaagtataactcaccagatgattccactgatatagctgatataagaggaccatatattgatttatttgggagagactg 31422094  T
Q  164 tgtcccttttccagcccagtacaagcagatctccaaggtattgctagtaaca 215  Q
    |||||||||||||||||| ||||| | ||||||||| ||||| ||| |||||    
T  31422093 tgtcccttttccagcccaatacaaacggatctccaaagtattactactaaca 31422042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 247 - 405
Target Start/End: Original strand, 21267303 - 21267458
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    |||||||| ||||||||  ||||| |||||||||||||||||| ||||||||| |||||   | || ||||||| ||||||| |||||||||||||||||    
T  21267303 cactaactggcacatcagcattccattagagaattaacatcagtgactaattttgataatgaatataaaatgtgaggatttttaaaacatttaatgaaat 21267402  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||||||||||||||||||    |||| |||||||||||||||||||||||||    
T  21267403 gtagggactattcttcaaaggatcga----aaaatgtaaggactaaaaacatatttaacc 21267458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 247 - 405
Target Start/End: Complemental strand, 21182462 - 21182307
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||  ||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||   |||||||||||||||||||||||    
T  21182462 cactaactgccacatcagcatttcgttagagaattaacaacagagactaattttgataacagagataaaatgtgaaaattttaaaaacatttaatgaaat 21182363  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  21182362 gtaaggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 21182307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 31252535 - 31252645
Alignment:
Q  105 gattccactgatatggctgatataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtat 204  Q
    |||||||||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| || ||||||||||||||    
T  31252535 gattccactgatatagcggatataagaggaccatatactgatctatttgggagagactgtgtcccttttccagcccaatacaggcggatctccaaggtat 31252634  T
Q  205 tgctagtaaca 215  Q
    | |||||||||    
T  31252635 tactagtaaca 31252645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 64 - 215
Target Start/End: Original strand, 31303933 - 31304081
Alignment:
Q  64 tagcataagattaggaacaaacaaagtataactcagtagatgattccactgatatggctgatataagaggaccatatactgatttatttggtagagactg 163  Q
    ||||||||||||||||||  |||||||||||| ||  ||||   || || ||||| ||||||||||||||||||||||||||| ||||||| |||||||     
T  31303933 tagcataagattaggaacgtacaaagtataacccaccagat---tcgacagatatagctgatataagaggaccatatactgatctatttggaagagactt 31304029  T
Q  164 tgtcccttttccagcccagtacaagcagatctccaaggtattgctagtaaca 215  Q
    |||||||||||||||||| ||||| | ||||||||||||||| |||||||||    
T  31304030 tgtcccttttccagcccaatacaaacggatctccaaggtattactagtaaca 31304081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 31357491 - 31357600
Alignment:
Q  113 tgatatggctgatataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtattgctagta 212  Q
    |||||| ||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  31357491 tgatatagctgatataagaggaccatatactgatctatttgggagtgactgtgtcccttttccagcccaatacaagcggatctccaaggtattactagta 31357590  T
Q  213 acatcaacat 222  Q
    ||| ||||||    
T  31357591 acaacaacat 31357600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 2517569 - 2517413
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||||||||| ||| |||||| || |||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  2517569 ccactaactgccacatcagcattccgttaaagagttaacaacaaagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 2517470  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||      |||||||| |||||||||||||| ||||||||||    
T  2517469 tgtagggactattcttcaaag----agacgcaaaatgtaaggactaaaaatatatttaacc 2517413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 2191373 - 2191217
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||||| || | ||||| |||||||||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  2191373 ccactaactgccacatcagtagttcgttaaagaattaacaacatggactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 2191274  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  2191273 tgtaaggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 2191217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 3691323 - 3691479
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| ||||||||||| |||||||| ||  ||||||||| |||||| ||||| |||||||  |||||||||||||||||||||||    
T  3691323 ccactaactgccacatcaacattccgttagaaaattaacagcatggactaattttgataacggagataaaatgtgaagattttaaaaacatttaatgaaa 3691422  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||    |  |||||||   |||||||||||||||||||||||    
T  3691423 tgtagggactattcttcaaag----gggcgcaaaatacaaggactaaaaacatatttaacc 3691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 21217255 - 21217411
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||||||||| |||||||||  ||| ||||||||| | |||| | ||| ||||||| ||||||||||||||||||||||||    
T  21217255 ccactaactgccacatcagcattccgttaaagaattaacggcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaa 21217354  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||   ||  ||||||| |||||||||||||||||||||||||    
T  21217355 tgtagggactattcttcaaag---cg-gcgcaaaatgtaaggactaaaaacatatttaacc 21217411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 21265147 - 21264991
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||||||||| |||||||||  ||| ||||||||| | |||| | ||| ||||||| ||||||||||||||||||||||||    
T  21265147 ccactaactgccacatcagcattccgttaaagaattaacggcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaa 21265048  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||   ||  ||||||| |||||||||||||||||||||||||    
T  21265047 tgtagggactattcttcaaag---cg-gcgcaaaatgtaaggactaaaaacatatttaacc 21264991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 31290124 - 31290234
Alignment:
Q  105 gattccactgatatggctgatataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtat 204  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| | ||||||||| ||||    
T  31290124 gattccaccgatatagctgatataagaggaccatatactgatctatttgggagagactgtgtcccttttccagcccaatacaaacggatctccaaagtat 31290223  T
Q  205 tgctagtaaca 215  Q
    | ||| |||||    
T  31290224 tactactaaca 31290234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 405
Target Start/End: Complemental strand, 32114310 - 32114166
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| ||||||||||||||||||||  || ||||||||| |||| ||||||| ||||||| ||||||||||||||||||||  | |||||||||||    
T  32114310 cacatcaacattccgttagagaattaacagtagcgactaattttgatatcagagataaaatgtgaggattttaaaaacatttaatagattgtagggacta 32114211  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||      || |||| |||||||||||||||||||||||||    
T  32114210 ttcttcaaagg-----gcgtaaaatgtaaggactaaaaacatatttaacc 32114166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 266 - 405
Target Start/End: Complemental strand, 21217059 - 21216923
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||||||||||||||||||| ||  ||||||||| ||||   ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21217059 attccgttagagaattaacagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 21216960  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |       ||||||| |||||||||||||| ||||||||||    
T  21216959 g----aggcgcaaaatgtaaggactaaaaagatatttaacc 21216923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 266 - 405
Target Start/End: Original strand, 21265343 - 21265479
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||||||||||||||||||| ||  ||||||||| ||||   ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21265343 attccgttagagaattaacagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 21265442  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |       ||||||| |||||||||||||| ||||||||||    
T  21265443 g----aggcgcaaaatgtaaggactaaaaagatatttaacc 21265479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 31372829 - 31372939
Alignment:
Q  105 gattccactgatatggctgatataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtat 204  Q
    ||||| |||||||| || |||||||||||||||||||||||| |  |||| ||| |||||||||||||||| ||||| ||||||| ||||||||||||||    
T  31372829 gattctactgatatagccgatataagaggaccatatactgatctccttgggagatactgtgtcccttttcccgcccaatacaagcggatctccaaggtat 31372928  T
Q  205 tgctagtaaca 215  Q
    | |||||||||    
T  31372929 tactagtaaca 31372939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 405
Target Start/End: Complemental strand, 24093310 - 24093156
Alignment:
Q  248 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 346  Q
    |||||||  |||||||  |||||||||||||||||||| ||  |||| |||| ||||||  |||  | ||||| ||||||||||||||||||||||||||    
T  24093310 actaactgtcacatcagcattccgttagagaattaacaacatggactgattttgataacgaagagaagatgtgaggattttaaaaacatttaatgaaatg 24093211  T
Q  347 tagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||    |  ||||||  |||||||||||||||||||||||||    
T  24093210 tagggactattcttcaaag----gggcgcaaagtgtaaggactaaaaacatatttaacc 24093156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 402
Target Start/End: Complemental strand, 7083677 - 7083525
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaatttg-ataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||  |||||||||||||||||||| |||| |||| |||  ||||  ||||| ||||||| |||||||||||| ||||||||||||    
T  7083677 cactaactgccacatcagcattccgttagagaattaacaacagatactattttttataagggagataaaatgtgaggattttaaaaaaatttaatgaaat 7083578  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 402  Q
    |||||||||||||||||||     | ||| |||| ||||||| ||||||||||||||    
T  7083577 gtagggactattcttcaaa----tggacgtaaaatgtaaggattaaaaacatattta 7083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 364
Target Start/End: Complemental strand, 3691216 - 3691120
Alignment:
Q  269 ccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||||||||||||||  ||| ||||||||| |||||| | ||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  3691216 ccgttagagaattaactgcagggactaattttgataacggtgataaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaa 3691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 364
Target Start/End: Original strand, 39729551 - 39729659
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    ||||| || |||||||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||| |||||||||||| ||  |||||    
T  39729551 cacattaacattccgttagagaattaacaacatagactaatttcgataacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagacta 39729650  T
Q  356 ttcttcaaa 364  Q
    |||||||||    
T  39729651 ttcttcaaa 39729659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 31317133 - 31317326
Alignment:
Q  26 tacaagacattttaaatattagatcataacaaggagat--tagcataagattaggaacaaacaaagtataactcagtagatgattccactgatatggctg 123  Q
    |||||||||||| ||||||||||||||||||  |||||  ||||||||||||||| |   |||| | ||||| ||   |||  |   |||||||| ||||    
T  31317133 tacaagacatttaaaatattagatcataacatagagatcatagcataagattagggatgtacaacgcataacccaccggatttt---actgatatagctg 31317229  T
Q  124 atataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtattgctagtaacatcaacat 222  Q
    ||||||||||||||||||||||| |||||||  | ||  |||||| |||||||||||| |  |||| ||||||||||||||| ||||||||| ||||||    
T  31317230 atataagaggaccatatactgatctatttgg--gggatagtgtcctttttccagcccaatgtaagcggatctccaaggtattactagtaacaacaacat 31317326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 31383279 - 31383373
Alignment:
Q  111 actgatatggctgatataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtatt 205  Q
    |||||||| ||||||||||||||||||||||||||  ||||||| | | |||| ||||||||||| ||||| ||||||||||||||||| |||||    
T  31383279 actgatatagctgatataagaggaccatatactgaactatttgggatatactgcgtcccttttcccgcccaatacaagcagatctccaatgtatt 31383373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 247 - 366
Target Start/End: Original strand, 10706586 - 10706704
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||| |||| ||||||||||||||| ||| ||||| ||| |||||| ||||| ||||||| |||||||||||| ||||||||||||    
T  10706586 cactaactgccacatcaacattctgttagagaattaacagcagggactagttttgataacggagataaaatgtgaggattttaaaaatatttaatgaaat 10706685  T
Q  346 gtagggactattcttcaaagg 366  Q
     ||  ||||||||||||||||    
T  10706686 ata--gactattcttcaaagg 10706704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 24093490 - 24093609
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||| || |||| |||||||||| |||||||| | ||  ||||||||| |||||| ||||| ||||||  |||||||||||||||||||| |||    
T  24093490 ccactaactaccatatcagtattccgttaaagaattaagagcatggactaattttgataacggagataaaatgtaaggattttaaaaacatttaataaaa 24093589  T
Q  345 tgtagggactattcttcaaa 364  Q
    | |||| |||||||||||||    
T  24093590 tataggcactattcttcaaa 24093609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 31279959 - 31280059
Alignment:
Q  105 gattccactgatatggctgatataagaggaccatatactgatttatttggtagagactgtgtcccttttccagcccagtacaagcagatctccaaggtat 204  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||| || ||||| ||||||| | ||||||| ||||    
T  31279959 gattctactgatatagctgatataagcggaccatgtactgatctatttgggagatactgtgtccctttccccgcccaatacaagcggttctccaatgtat 31280058  T
Q  205 t 205  Q
    |    
T  31280059 t 31280059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 32114457 - 32114520
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    ||||||||||||||| || |||| | |||||||||| ||||||||||||||| |||||||||||    
T  32114457 tttgataacagagataaagtgtgagaattttaaaaatatttaatgaaatgtaaggactattctt 32114520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 3624925 - 3624967
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaag 3624967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 10709555 - 10709475
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||| |||||||||||||||  |||  ||||||||  ||| ||| ||||||||||||||||    
T  10709555 ggattttaaaaacatttattgaaatgtaaggactattcttcaaa--atc--acgcaaaatctaaagaccaaaaacatatttaacc 10709475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 2606591 - 2606695
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||  ||| ||||| |||||||||| ||  ||||||||| |||| | ||||| |||| || | |||||||||||||||||||||||    
T  2606591 cactaactgccacatcagcatttcgttaaagaattaacagcatggactaattttgatagcggagataaaatatgagaattttaaaaacatttaatgaaat 2606690  T
Q  346 gtagg 350  Q
    |||||    
T  2606691 gtagg 2606695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 32860918 - 32860814
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 396  Q
    |||||| || ||||| ||||||  ||||||||||||||||||||||||| ||  ||||||| ||||||||     ||||||||  ||| | |||||||||    
T  32860918 tttgatcacggagataaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaaggg----acgcaaaatataaaggctaaaaaca 32860823  T
Q  397 tatttaacc 405  Q
    |||||||||    
T  32860822 tatttaacc 32860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 1804311 - 1804273
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1804311 ggattttaaaaacatttattgaaatgtagggactattct 1804273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 1804673 - 1804711
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1804673 ggattttaaaaacatttattgaaatgtagggactattct 1804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 360
Target Start/End: Original strand, 2036594 - 2036652
Alignment:
Q  302 taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||| |||| |  |||||||||||||||| | |||||||||||||||||||||    
T  2036594 taacagagataaaatatagggattttaaaaacattaattgaaatgtagggactattctt 2036652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 3854508 - 3854587
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  3854508 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 3854587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 6476166 - 6476128
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6476166 ggattttaaaaacatttattgaaatgtagggactattct 6476128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 6476528 - 6476566
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6476528 ggattttaaaaacatttattgaaatgtagggactattct 6476566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 11451197 - 11451235
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11451197 ggattttaaaaacatttattgaaatgtagggactattct 11451235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 405
Target Start/End: Original strand, 23222865 - 23222953
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||| ||||||||||||||| || ||||||||| |||||||| || ||||  | |  ||||||| ||| |||||||||||||||||||||    
T  23222865 aaatgtgaggattttaaaaacatatattgaaatgtaaggactattatttaaag--ttg--cgcaaaatgtagggactaaaaacatatttaacc 23222953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 27377728 - 27377690
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  27377728 ggattttaaaaacatttattgaaatgtagggactattct 27377690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 39096611 - 39096565
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  39096611 aaatgtatggattttaaaaacatttattgaaatgtaaggactattct 39096565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 39947096 - 39947176
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||  ||  || ||||| ||| |||| ||||||||||||||||    
T  39947096 ggattttaaaaacatttattgaaatgtaaggactattgttcaaag--tc--actcaaaatgtagggaccaaaaacatatttaacc 39947176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 23221914 - 23221870
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  23221914 ggatattaaaaacatttattgaaatgtaggtactattcttcaaag 23221870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 39945922 - 39945878
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||    
T  39945922 ggattttaaaaacatttattgaaatgtaaggactattgttcaaag 39945878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 285
Target Start/End: Original strand, 32861147 - 32861186
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaaca 285  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  32861147 ccactaactgccacatcaatattccgttagagaattaaca 32861186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 360
Target Start/End: Complemental strand, 2035707 - 2035649
Alignment:
Q  302 taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||| ||||| ||||||  |||||||||||||||||| | ||||||||||| |||||||    
T  2035707 taacggagataaaatgtagggattttaaaaacatttattaaaatgtagggattattctt 2035649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 2606695 - 2606729
Alignment:
Q  370 gaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    |||||||||| ||||||||||||||||||||||||    
T  2606695 gaacgcaaaatgtaaggactaaaaacatatttaac 2606729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 12090136 - 12090174
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  12090136 ggattttaaaaacattcattgaaatgtagggactattct 12090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 26525905 - 26525984
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| |||||| |||||||||||  |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  26525905 ggattttaaaaacatttattgaaatatagggactatt-atcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 26525984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 34037888 - 34037850
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  34037888 ggattttaaaaacattcattgaaatgtagggactattct 34037850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 18105794 - 18105753
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||||||||| |||| ||||||||||||| |||||||||||    
T  18105794 attttaaaaacctttattgaaatgtagggaatattcttcaaa 18105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 24093409 - 24093365
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||||| ||||||| | |||||||| |||||||    
T  24093409 ggattttaaaaacatttattgaaatgcaaggactatttttcaaag 24093365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 32861050 - 32861094
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||||| |||||| || |||||||| |||||||    
T  32861050 ggattttaaaaacatttattgaaatataaggactatttttcaaag 32861094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 44934693 - 44934729
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  44934693 ggattttaaaaacatttattgaaatgtaaggactatt 44934729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 9218448 - 9218603
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||| || |||||||  |||||||||||||||||||| |||||||||||||||||||  |||| |||||||  ||||||||||||||||||||||||    
T  9218448 ccactaattatcacatcagcattccgttagagaattaacaacagagactaatttgataacgaagataaaatgtgatgattttaaaaacatttaatgaaat 9218547  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
     |||||||||||||||||||    || ||||||| |||| ||||||||||||||||||||    
T  9218548 atagggactattcttcaaag----gagcgcaaaatgtaatgactaaaaacatatttaacc 9218603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 246 - 365
Target Start/End: Complemental strand, 9217976 - 9217856
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||||||  |||||||| |||||||||| ||| ||||||||| | |||| ||||| ||||||| ||||||||||||||||||||||||    
T  9217976 ccactaactgccacatcaacgttccgttaaagaattaacaacagtgactaattttaataacggagataaaatgtgaggattttaaaaacatttaatgaaa 9217877  T
Q  345 tgtagggactattcttcaaag 365  Q
    |||||||||||||||||||||    
T  9217876 tgtagggactattcttcaaag 9217856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 250 - 405
Target Start/End: Complemental strand, 22814448 - 22814296
Alignment:
Q  250 taactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgta 348  Q
    |||||| |||||||| ||||||||||| |||||| | ||| ||||||||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||    
T  22814448 taactatcacatcaacattccgttagaaaattaatagcagggactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgta 22814349  T
Q  349 gggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
     ||||||||||||||||    |  ||||||| ||||| | |||||||||||||||||    
T  22814348 tggactattcttcaaag----gggcgcaaaatgtaagaattaaaaacatatttaacc 22814296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 364
Target Start/End: Complemental strand, 44504248 - 44504129
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||||||||||||||||||| ||  ||||||||| |||||| ||||| ||||||| |||||||||||| |||||||||||    
T  44504248 ccactaactgtcacatcatcattccgttagagaattaacaacatggactaattttgataacggagataaaatgtgaggattttaaaaatatttaatgaaa 44504149  T
Q  345 tgtagggactattcttcaaa 364  Q
    ||||||||||||||||||||    
T  44504148 tgtagggactattcttcaaa 44504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 405
Target Start/End: Original strand, 26741241 - 26741390
Alignment:
Q  249 ctaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgt 347  Q
    |||||| ||||||||  |||||||||||||||||||| ||  ||||||||| |||||||||||| ||||||| |||||||||||||    ||||||||||    
T  26741241 ctaactggcacatcagcattccgttagagaattaacagcaatgactaattttgataacagagataaaatgtgaggattttaaaaac----aatgaaatgt 26741336  T
Q  348 agggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |  |||||||||||||||    |  ||||||||||||||||| |||||||||||||||    
T  26741337 aaagactattcttcaaag----gggcgcaaaacgtaaggacttaaaacatatttaacc 26741390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 43933596 - 43933440
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||||| ||| |||||||||| ||| ||||||||| ||||||  |||| ||||||| |||||||||||| |||||||||||    
T  43933596 ccactaactgtcacatcagcattccattatagaattaacaacagggactaattttgataacgaagataaaatgtgaggattttaaaaatatttaatgaaa 43933497  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||||||||||||    ||  | ||||| |||||||||||||| ||||||||||    
T  43933496 tgtagggactattcttcaaa----cgggcacaaaatgtaaggactaaaaatatatttaacc 43933440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 362
Target Start/End: Complemental strand, 27013565 - 27013448
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatt-tgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||||| ||||||||||||||||||||| || ||||||||| ||||||| ||||| ||||||  |||||||||||||||||||| |||    
T  27013565 ccactaactgccacatcagtattccgttagagaattaacaacatagactaattgtgataacggagataaaatgtaaggattttaaaaacatttaataaaa 27013466  T
Q  345 tgtagggactattcttca 362  Q
    || ||| |||||||||||    
T  27013465 tgcaggaactattcttca 27013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 257 - 405
Target Start/End: Complemental strand, 51471480 - 51471335
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| ||||  ||||||||  |||  ||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||  ||||    
T  51471480 cacatcaacattctcttagagaaccaacgacagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaacta 51471381  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||     |||||||| ||||| ||||| |||||||||||||    
T  51471380 ttcttcaaaggg----acgcaaaatgtaagaactaagaacatatttaacc 51471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 405
Target Start/End: Complemental strand, 25770466 - 25770321
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  |||||||||||||||||||| ||  || |||||| ||||||   ||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  25770466 cacatcagcattccgttagagaattaacaacatggattaattttgataacgatgataaaatgtgaggattctaaaaacatttaatgaaatgtagggacta 25770367  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||    | |  ||||| |||||||||||||||||||| ||||    
T  25770366 ttcttcaaag----ggatacaaaatgtaaggactaaaaacatattgaacc 25770321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 13637766 - 13637870
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 396  Q
    ||||||||| ||||| ||||||| |||||||||||| |||||||||||||||| |||||||||||||||    |  ||||||| |||||||||| |||||    
T  13637766 tttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattcttcaaag----gggcgcaaaatgtaaggactagaaaca 13637861  T
Q  397 tatttaacc 405  Q
    |||||||||    
T  13637862 tatttaacc 13637870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 44504372 - 44504476
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 396  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    |   |||||| ||||||||||||||||    
T  44504372 tttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag----gggtgcaaaatgtaaggactaaaaaca 44504467  T
Q  397 tatttaacc 405  Q
     ||||||||    
T  44504468 catttaacc 44504476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 401
Target Start/End: Complemental strand, 50732361 - 50732229
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||| |||||||||||||| ||| ||||||||| |||||| ||||| ||||| | |||||||||||| ||||||||||||||| |||||||| ||||||    
T  50732361 attccattagagaattaacagcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaa 50732262  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatattt 401  Q
    |    || ||||||| |||||||  ||||||||||||    
T  50732261 g----gagcgcaaaatgtaaggataaaaaacatattt 50732229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 401
Target Start/End: Original strand, 50780494 - 50780626
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||| |||||||||||||| ||| ||||||||| |||||| ||||| ||||| | |||||||||||| ||||||||||||||| |||||||| ||||||    
T  50780494 attccattagagaattaacagcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaa 50780593  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatattt 401  Q
    |    || ||||||| |||||||  ||||||||||||    
T  50780594 g----gagcgcaaaatgtaaggataaaaaacatattt 50780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 51755903 - 51755968
Alignment:
Q  300 gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  51755903 gataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 51755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 314 - 405
Target Start/End: Original strand, 132062 - 132149
Alignment:
Q  314 aatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||    ||  |||||| |||||||||||| ||||||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag----gagtgcaaaatgtaaggactaaatacatatttaacc 132149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 402
Target Start/End: Complemental strand, 37172235 - 37172084
Alignment:
Q  248 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 346  Q
    |||||||  |||||||| |||||||| |||||||  || | | ||||||||| |||||| ||||| || |||| ||||||||||||||||||||||||||    
T  37172235 actaactgccacatcaacattccgttggagaattttcagccgggactaattttgataacggagataaactgtgaggattttaaaaacatttaatgaaatg 37172136  T
Q  347 tagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 402  Q
    ||| |||||||||| |||      | ||||||| |||||||||||||| |||||||    
T  37172135 tagagactattctttaaa----taagcgcaaaatgtaaggactaaaaaaatattta 37172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 267 - 405
Target Start/End: Original strand, 37172431 - 37172566
Alignment:
Q  267 ttccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    ||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||||  ||||||||||||||||||| || |||||| | ||||||||||||    
T  37172431 ttccgttagagaattaacagcatggactaattttgataatagagataaaatgtggagattttaaaaacatttaataaagtgtaggaattattcttcaaag 37172530  T
Q  366 gatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
        | ||| |||||| ||||| |||||| ||||||||||    
T  37172531 ----ggacgtaaaacgcaaggattaaaaatatatttaacc 37172566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 405
Target Start/End: Original strand, 34743426 - 34743560
Alignment:
Q  268 tccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagg 366  Q
    ||||||| |||||||||  ||||||||||||| ||||||| | || ||||||| ||||||| |||||||||||||||||||| |||  ||||||||||||    
T  34743426 tccgttaaagaattaaccgcagagactaattttgataacatatataaaatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaagg 34743525  T
Q  367 atcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
         |||||||  |||||||||| | ||||||||||||    
T  34743526 g----acgcaaagtgtaaggactagatacatatttaacc 34743560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 404
Target Start/End: Original strand, 43933714 - 43933816
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 396  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||| |||| ||||||| ||||||     | |||||||| || |||||||||||||    
T  43933714 tttgataacagagataaaatatgaggattttaaaaacatttaatgaaa-gtagagactatttttcaaa----tggacgcaaaatgtgaggactaaaaaca 43933808  T
Q  397 tatttaac 404  Q
    ||||||||    
T  43933809 tatttaac 43933816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 38485840 - 38485733
Alignment:
Q  258 acatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactat 356  Q
    ||||||| ||||||||| |||||||||| || |||||||||| |||||| ||||  |||||   ||||||||||||||| |||| ||||||| |||||||    
T  38485840 acatcaacattccgttaaagaattaacagcaaagactaattttgataacggagaa-aaatgcaaggattttaaaaacatataataaaatgtatggactat 38485742  T
Q  357 tcttcaaag 365  Q
    |||||||||    
T  38485741 tcttcaaag 38485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 33225594 - 33225522
Alignment:
Q  295 aatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 367  Q
    |||||| ||||||| || ||||||| |||||||||||||||||| | ||||||||||||||||  ||||||||    
T  33225594 aatttggtaacagatataaaatgtggggattttaaaaacatttacttaaatgtagggactatttatcaaagga 33225522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 25770574 - 25770493
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    |||||||||||||||||| |||||||||  ||||||| ||||||  |||  |||||||| ||||||| ||||||||||||||||||    
T  25770574 ggattttaaaaacatttattgaaatgtaaagactatttttcaaa--atc--acgcaaaatgtaaggattaaaaacatatttaacct 25770493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 45728335 - 45728407
Alignment:
Q  329 aaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||| ||||||||||||||| ||||||||||||||||    | || ||||| |||||||||||||||||||||||||    
T  45728335 aaaatatttaatgaaatgtatggactattcttcaaag----ggacacaaaatgtaaggactaaaaacatatttaacc 45728407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 48868597 - 48868677
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| |||||||||||||||||| |||||||     | ||||||| ||| ||||||| |||||||||||||    
T  48868597 ggattttaaaaacatttattgaaatgtagggactattattcaaag----tagcgcaaaatgtagggactaataacatatttaacc 48868677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 4199896 - 4199975
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  4199896 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 4199975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 13637631 - 13637530
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| |||||||||||||||||||   | ||||||| |||||||||  |||| |||| ||  ||||||||||| |||||||||||    
T  13637631 ccactaactgccacatcaacattccgttagagaattaacggtaaagactaattttgataacgaagataaaatatgaagattttaaaaatatttaatgaaa 13637532  T
Q  345 tg 346  Q
    ||    
T  13637531 tg 13637530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 403
Target Start/End: Original strand, 25770728 - 25770804
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 403  Q
    |||||||||||||||||| ||||||||| |||||||||||||     ||  |||||| ||||||| |||||||||||||||    
T  25770728 attttaaaaacatttaataaaatgtaggaactattcttcaaa----tgagtgcaaaatgtaaggattaaaaacatatttaa 25770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 45539288 - 45539249
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45539288 ggattttaaaaacatttattgaaatgtagggactattctt 45539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 45539650 - 45539689
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45539650 ggattttaaaaacatttattgaaatgtagggactattctt 45539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 27475469 - 27475390
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  27475469 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 27475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 34949835 - 34949756
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  34949835 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 34949756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 36899333 - 36899295
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  36899333 ggattttaaaaacatttattgaaatgtagggactattct 36899295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 36899695 - 36899733
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  36899695 ggattttaaaaacatttattgaaatgtagggactattct 36899733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 42606359 - 42606321
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  42606359 ggattttaaaaacatttattgaaatgtagggactattct 42606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 46689761 - 46689723
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  46689761 ggattttaaaaacatttattgaaatgtagggactattct 46689723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 54588535 - 54588493
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  54588535 attttaaaaacatttattgaaatgtatggactattcttcaaag 54588493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 404
Target Start/End: Complemental strand, 27013657 - 27013583
Alignment:
Q  326 ttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    |||||||||| || | ||||||| |||||||||||||||  |||  |||||||| |||||||| |||||||||||||||    
T  27013657 ttaaaaacatatattaaaatgtaaggactattcttcaaa--atc--acgcaaaatgtaaggaccaaaaacatatttaac 27013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 33226906 - 33227011
Alignment:
Q  295 aatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaa 394  Q
    ||||||||| |||| || |||| ||  ||||||||||||||||| | |||| |||||||||||  ||||||    || ||||||| ||| ||||||| ||    
T  33226906 aatttgatagcagatataaaatttggagattttaaaaacatttacttaaatatagggactatttatcaaag----gagcgcaaaatgtagggactaagaa 33227001  T
Q  395 catatttaac 404  Q
    ||||||||||    
T  33227002 catatttaac 33227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 48867730 - 48867650
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||| ||||| |||||||||||||||||| || ||||     | ||||||| ||| ||||||| |||||||||||||    
T  48867730 ggattttaaaaatatttattgaaatgtagggactattatttaaag----tagcgcaaaatgtagggactaataacatatttaacc 48867650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 2388711 - 2388673
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  2388711 ggattttaaaaacatttattgaaatgtagagactattct 2388673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 2389073 - 2389111
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  2389073 ggattttaaaaacatttattaaaatgtagggactattct 2389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 22407284 - 22407363
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | |||||||||||||||||| ||||||  || |  ||||||| ||| |||| ||||||||||||||||    
T  22407284 ggattttaaaaacattcattgaaatgtagggactatt-ttcaaa--attg--cgcaaaatgtagggaccaaaaacatatttaacc 22407363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 42606721 - 42606759
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  42606721 ggattttaaaaatatttattgaaatgtagggactattct 42606759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 46690123 - 46690161
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  46690123 ggattttaaaaacatttattgaaatgtagggattattct 46690161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 20826808 - 20826772
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  20826808 ggattttaaaaacatttattgaaatgtaaggactatt 20826772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 20831111 - 20831147
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  20831111 ggattttaaaaacatttattgaaatgtaaggactatt 20831147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 246 - 397
Target Start/End: Original strand, 22948812 - 22948960
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||||||||||||||||||| |||||||  |||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  22948812 ccactaactgccacatcaatattccgttagagcattaacaatagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 22948911  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacat 397  Q
    ||||| |||||||||||||||| |    ||||||| |||||||||||||||||    
T  22948912 tgtagagactattcttcaaagggt----cgcaaaatgtaaggactaaaaacat 22948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 412
Target Start/End: Complemental strand, 32092384 - 32092221
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||||| |||||||||| |||||||||| || |||||||||| ||||||| | |  ||||||| ||||||||||||||||||||||||    
T  32092384 ccactaactgccacatcagtattccgttatagaattaacaacaaagactaattttgataacaaacacaaaatgtgaggattttaaaaacatttaatgaaa 32092285  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 412  Q
    || ||||||||||||||||||       ||||||| ||||||||||||||||||||||||| ||||||    
T  32092284 tgcagggactattcttcaaag----aggcgcaaaatgtaaggactaaaaacatatttaacccataaaa 32092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 266 - 403
Target Start/End: Complemental strand, 11974800 - 11974666
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||||||||||||||||||| || |||||||||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||  ||||||| ||||||    
T  11974800 attccgttagagaattaacaacaaagactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtacagactatttttcaaa 11974701  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaa 403  Q
    |    || ||||||| ||||||||||||| |||||||||    
T  11974700 g----gagcgcaaaatgtaaggactaaaatcatatttaa 11974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 366
Target Start/End: Complemental strand, 20544067 - 20543946
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||| |||||||  ||  |||||||||||||||| |||| |||||||| |||||| ||||| |||| || |||||||||||| |||||||||||    
T  20544067 ccactaactatcacatcaccatctcgttagagaattaacagcagaaactaattttgataacggagataaaatatgaggattttaaaaaaatttaatgaaa 20543968  T
Q  345 tgtagggactattcttcaaagg 366  Q
    ||||||||||||||||||||||    
T  20543967 tgtagggactattcttcaaagg 20543946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 18152912 - 18152756
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||||||||||||||||||| ||||  ||||||| |||||| ||||| ||||||| ||||||||| |||||||||  |||    
T  18152912 ccactaactgtcacatcagcattccgttagagaattaacaacagaagctaattttgataacggagataaaatgtgaggattttaagaacatttaacaaaa 18152813  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||    |  ||||||| ||||| ||| |||||||||||||||    
T  18152812 tgtagggactattcttcaaag----gggcgcaaaatgtaagaactgaaaacatatttaacc 18152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 246 - 404
Target Start/End: Complemental strand, 28838508 - 28838356
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||| |||||||||||||||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  28838508 ccactaactgccacatcagcatttcgttagagaattaacaccaatgactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 28838409  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    ||| |||||  |||||||||||     || ||||| |||| |||||||||||||||||||    
T  28838408 tgtcgggac--ttcttcaaagg-----acacaaaatgtaaagactaaaaacatatttaac 28838356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 405
Target Start/End: Original strand, 17075571 - 17075707
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    |||||||||||||||||| | ||  ||||||||| ||||   ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17075571 attccgttagagaattaatagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 17075670  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |       ||||||| |||||||||||||| ||||||||||    
T  17075671 g----aggcgcaaaatgtaaggactaaaaagatatttaacc 17075707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 404
Target Start/End: Original strand, 44803577 - 44803721
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| ||||||||||| ||| | || ||  ||||||||| |||||| ||||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  44803577 cacatcaacattccgttagaaaatgatcagcatggactaattttgataacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagacta 44803676  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    ||||| ||||     | ||||||| ||||||||||||||||||||||||    
T  44803677 ttctttaaag----aagcgcaaaatgtaaggactaaaaacatatttaac 44803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 17075375 - 17075219
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||||||||| |||||||||  ||  ||||||||| | |||| | ||| ||||||| ||||||||||||| ||||||||||    
T  17075375 ccactaactgccacatcagcattccgttaaagaattaacggcaaggactaattttgttaacggggataaaatgtgaggattttaaaaacttttaatgaaa 17075276  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||   ||  |||||||  ||||||||||||||||||||||||    
T  17075275 tgtagggactattcttcaaag---cg-gcgcaaaatataaggactaaaaacatatttaacc 17075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 405
Target Start/End: Complemental strand, 28852829 - 28852693
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||| |||||||||||||| ||||| ||||||| |||||| | ||| ||||||| |||||||||||||||||||||||||||||||| |||| || |||    
T  28852829 attcccttagagaattaacaacagaggctaattttgataacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaa 28852730  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
         | || ||||| ||||||| |||||||||||||||||    
T  28852729 ----tggacacaaaatgtaaggattaaaaacatatttaacc 28852693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 405
Target Start/End: Original strand, 10466724 - 10466869
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| |||||||||||||||||| | || | |||||||| |||||  ||||| |||||||  ||||||||||||||||||| |||| ||| |||||    
T  10466724 cacatcaacattccgttagagaattaatagcataaactaattttgataatggagataaaatgtgacgattttaaaaacatttaataaaatatagagacta 10466823  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||   || | |||||||| |||| || |||||||||||||||||    
T  10466824 ttcttcaa---atag-acgcaaaatgtaaagattaaaaacatatttaacc 10466869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 404
Target Start/End: Original strand, 5029688 - 5029842
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||| |||||| |||||||| ||  ||||||||| |||| | ||||| ||||||| |||||| |||||||||||||||||    
T  5029688 ccactaactgccacatcagcattctgttagataattaacaacatggactaattttgatagcggagataaaatgtgaggattt-aaaaacatttaatgaaa 5029786  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    | |||||||||||||||||||      |||||||| |||| ||||||||| |||||||||    
T  5029787 tatagggactattcttcaaag----agacgcaaaatgtaacgactaaaaatatatttaac 5029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 42750108 - 42750173
Alignment:
Q  301 ataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagg 366  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  42750108 ataacggagataaaatgtgaggattttaaaaacgtttaatgaaatgtagggactattcttcaaagg 42750173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 11975023 - 11975119
Alignment:
Q  272 ttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 367  Q
    |||||||||||||| ||||||||||||| |||||| || || ||||||| |||||||||||||||||||| ||| |||  ||||||| |||||||||    
T  11975023 ttagagaattaacaacagagactaattttgataacggaaataaaatgtgaggattttaaaaacatttaataaaacgtaaagactatttttcaaagga 11975119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 20544245 - 20544363
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| ||| |||||||||||||| | ||  |||| |||| ||||||  |||| ||||||| | ||||||||||||||||||||||    
T  20544245 ccactaactgccacatcaacattacgttagagaattaatagcaacgactgattttgataacgaagataaaatgtgag-attttaaaaacatttaatgaaa 20544343  T
Q  345 tgtagggactattcttcaaa 364  Q
    |||| |||||||||||||||    
T  20544344 tgtaaggactattcttcaaa 20544363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 23548752 - 23548670
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacattta 338  Q
    |||||||  |||||||||||||||||||| || |||||||||| |||||||||||| ||||||| | ||||||||||||||||    
T  23548752 cacatcagcattccgttagagaattaacaacaaagactaattttgataacagagataaaatgtgagtattttaaaaacattta 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 353
Target Start/End: Original strand, 32092505 - 32092571
Alignment:
Q  288 agagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggac 353  Q
    |||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  32092505 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggac 32092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 6621113 - 6621170
Alignment:
Q  308 agatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagg 366  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6621113 agataaaatgtgaggattttaaaa-catttaatgaaatgtagggactattcttcaaagg 6621170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 18443619 - 18443698
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| |||||||| ||||||||||||||||    
T  18443619 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtaaggaccaaaaacatatttaacc 18443698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 405
Target Start/End: Original strand, 12933045 - 12933151
Alignment:
Q  295 aatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaa 394  Q
    |||||| ||||||| || ||||||| |||||||| ||||||||| | |||| |||||||||||  ||||||    |||| ||||| ||| ||||||||||    
T  12933045 aatttggtaacagatataaaatgtgaggattttagaaacatttacttaaatatagggactatttatcaaag----gaacacaaaatgtagggactaaaaa 12933140  T
Q  395 catatttaacc 405  Q
    |||||||||||    
T  12933141 catatttaacc 12933151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 44803471 - 44803382
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    |||||||| ||| |||||||||||||||| |||||||||| ||||||| ||||||| |||| |  |||||||||||| ||||||| ||||    
T  44803471 cacatcaacatttcgttagagaattaacaacagagactaattttgatagcagagataaaatataaggattttaaaaatatttaataaaat 44803382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 28854781 - 28854718
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    ||||||||| || || ||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  28854781 tttgataactgaaataaaatgtgaggattttaaaaacatttaataaaatgtagggagtattctt 28854718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 27311060 - 27311102
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  27311060 attttaaaaacatttaatgaaatgtagggactattctttaaag 27311102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 30939574 - 30939654
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||| |||||||||||||||||||||||||||| ||  || |  || |||| ||| |||||||||||||||||||||    
T  30939574 ggattttaaaaatatttaatgaaatgtagggactattcttcgaa--atgg--cgtaaaatgtagggactaaaaacatatttaacc 30939654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 365
Target Start/End: Original strand, 49053825 - 49053935
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataac-agagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggact 354  Q
    |||||||| |||||||||||| ||||| | || |||||||||| |||||  | | || ||| ||| ||||||||||||| |||||||||||||||||| |    
T  49053825 cacatcaacattccgttagagcattaatagcatagactaattttgataatgaaaaataaaacgtgaggattttaaaaacttttaatgaaatgtagggatt 49053924  T
Q  355 attcttcaaag 365  Q
    ||| |||||||    
T  49053925 atttttcaaag 49053935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 27310127 - 27310087
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttc 361  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  27310127 ggattttaaaaacatttaatgaaatgtagggaccattcttc 27310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 1244453 - 1244532
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  1244453 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 1244532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 28898108 - 28898029
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  28898108 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 28898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 41298686 - 41298765
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  41298686 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 41298765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 408
Target Start/End: Complemental strand, 18443255 - 18443173
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctat 408  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||  ||||   |||||| ||| |||| |||||||||||||||||||    
T  18443255 ggattttaaaaacatttattgaaatgtaaggactattc-tcaaa--atcg--tgcaaaatgtagggaccaaaaacatatttaacctat 18443173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 33848309 - 33848346
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||||||| |||||||||||||||||||||    
T  33848309 attttaaaaacatttattgaaatgtagggactattctt 33848346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 16755643 - 16755687
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||    
T  16755643 ggattttaaaaatatttaatgaaatatagagactattcttcaaag 16755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 405
Target Start/End: Complemental strand, 29784012 - 29783935
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| |||||| |||||||||||| |||||  ||||  | ||||| ||| |||||||||||||||||||||    
T  29784012 attttaaaaacatttattgaaatatagggactattc-tcaaa--atcg--cacaaaatgtagggactaaaaacatatttaacc 29783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 12908475 - 12908425
Alignment:
Q  307 gagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    ||||| ||||||| |||||||||||||||||| | ||||||||||| ||||    
T  12908475 gagataaaatgtgaggattttaaaaacatttagttaaatgtagggattatt 12908425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 22954125 - 22954087
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  22954125 ggattttaaaaacatttattaaaatgtagggactattct 22954087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 33847945 - 33847907
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  33847945 ggattttaaaaacatttattgaaatgtagagactattct 33847907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 10466695 - 10466651
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    ||||| |||||||||||| ||||||||| |||||||| |||||||    
T  10466695 ggattataaaaacatttattgaaatgtaaggactatttttcaaag 10466651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 11992794 - 11992750
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||| ||| |||||||||||| |||||| ||||    
T  11992794 ggattttaaaaacattaaataaaatgtagggacaattctttaaag 11992750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 26997803 - 26997959
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||| |||||||  |||||||||||||||||||| ||| ||||||||| |||||| ||||| ||||||| |||||||||||| | |||||||||    
T  26997803 ccactaactaccacatcagcattccgttagagaattaacagcagggactaattttgataacggagataaaatgtgaggattttaaaaataattaatgaaa 26997902  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||| |||||||||||||||     | |||||||| ||||| |||||||||||||||||||    
T  26997903 tgtatggactattcttcaaa----tggacgcaaaatgtaagaactaaaaacatatttaacc 26997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 364
Target Start/End: Complemental strand, 12489384 - 12489265
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||| ||| |||  |||||||||||||||||||| ||||||||||||| ||||||| |||| ||||| | |||||||||||| |||||||||||    
T  12489384 ccactaactaccacgtcaccattccgttagagaattaacagcagagactaattttgataacaaagataaaatgcgaggattttaaaaatatttaatgaaa 12489285  T
Q  345 tgtagggactattcttcaaa 364  Q
    ||||||||||||||||||||    
T  12489284 tgtagggactattcttcaaa 12489265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 13315358 - 13315202
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| ||||||||||||||||||||  |  | |||| ||||||||||||||| |||||||  |||||||||||||||||||||||    
T  13315358 ccactaactgccacatcaacattccgttagagaattaacaggaatggctaattttgataacagagataaaatgtgatgattttaaaaacatttaatgaaa 13315259  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| |||     |  ||||||| |||||||||||||||||||||||||    
T  13315258 tgtagggactattctttaaa----tgggcgcaaaatgtaaggactaaaaacatatttaacc 13315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 17915441 - 17915596
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  ||||||||||||| |||| |||||||||| || |||||||||| |||||||||||| ||||||| |||||| ||||||||||||| |||    
T  17915441 ccactaactgccacatcaatattctgttaaagaattaacagcaaagactaattttgataacagagataaaatgtgaggatttaaaaaacatttaataaaa 17915540  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||| ||| ||||||||||||    || | ||||| |||||||||||||||||||||||||    
T  17915541 tgtaagga-tattcttcaaag----gagcacaaaatgtaaggactaaaaacatatttaacc 17915596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 404
Target Start/End: Complemental strand, 6297618 - 6297463
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||||||| ||||||||||| ||  ||||||||| |||||||||||  ||||||| ||||||||||||||||||||||||    
T  6297618 ccactaactgccacatcagcattccgttggagaattaacagcaaggactaattttgataacagagagaaaatgtgaggattttaaaaacatttaatgaaa 6297519  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    |||||| ||||||||||||||    |  ||||||| |||||||||||| |||||||||||    
T  6297518 tgtaggaactattcttcaaag----gggcgcaaaatgtaaggactaaagacatatttaac 6297463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 257 - 405
Target Start/End: Original strand, 6297980 - 6298125
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  ||||||||||||||||||||  || ||||||||| |||||| || || ||||||| |||||||||||||||||||||||||||| ||||||    
T  6297980 cacatcagcattccgttagagaattaacaatagggactaattttgataacggaaataaaatgtgaggattttaaaaacatttaatgaaatgtaaggacta 6298079  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||   ||| |||||| ||||| |||||||||| ||||||||    
T  6298080 ttcttcaaagg---gaa-gcaaaatgtaagcactaaaaacacatttaacc 6298125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 9800195 - 9800039
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||||||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||||||||||| |||    
T  9800195 ccactaactgccacatcagcattccgttagagaattaacagcaaagactaattttgataacggagatgaaatgtgaggattttaaaaacatttaataaaa 9800096  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||| ||| ||||||||||||       |||||||  ||||||||||||||||||||||||    
T  9800095 tgtaaggattattcttcaaag----aggcgcaaaatctaaggactaaaaacatatttaacc 9800039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 16662324 - 16662168
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||| ||||||||||||||||  || ||||||||| | |||||||||| ||||||| | ||||||||||||||||||||||    
T  16662324 ccactaactgccacatcagcatttcgttagagaattaacagtagggactaattttaataacagagataaaatgtgagaattttaaaaacatttaatgaaa 16662225  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||||||    || ||||||| ||||| ||||||| |||| ||||||    
T  16662224 tgtagggactattcttcaaag----gagcgcaaaatgtaagaactaaaatcataattaacc 16662168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 402
Target Start/End: Original strand, 16662417 - 16662558
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| |||||||||||||||||||| ||| || |||||| || ||| ||||| |||| || | |||||||||||||||||||||||||||| ||||    
T  16662417 cacatcaacattccgttagagaattaacaacagggattaattttgagaacggagat-aaatatgagaattttaaaaacatttaatgaaatgtaggaacta 16662515  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 402  Q
    |||||||||     || ||||||| ||||||||||||||||||||||    
T  16662516 ttcttcaaa----agagcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 250 - 365
Target Start/End: Original strand, 6297800 - 6297916
Alignment:
Q  250 taactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgta 348  Q
    |||||| |||||||| ||||  ||||||||| |||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  6297800 taactaccacatcaacattctattagagaatcaacaacaaggactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgta 6297899  T
Q  349 gggactattcttcaaag 365  Q
     ||||||||||||||||    
T  6297900 aggactattcttcaaag 6297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 257 - 405
Target Start/End: Complemental strand, 10047623 - 10047479
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    ||||||| | ||||||||||||||||||| ||  ||||||||| |||||| ||||| ||||||| | ||||||||||||||||||| |||||||||||||    
T  10047623 cacatcagtgttccgttagagaattaacagcatggactaattttgataacggagataaaatgtgagaattttaaaaacatttaatg-aatgtagggacta 10047525  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||     |  ||||||| ||||||| |||||||||||||||||    
T  10047524 ttcttcaaa----agggcgcaaaatgtaaggattaaaaacatatttaacc 10047479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 17914301 - 17914197
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 396  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||      |||||||| |||| |||| ||||||    
T  17914301 tttgataacagagataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaag----agacgcaaaatgtaaagacttaaaaca 17914206  T
Q  397 tatttaacc 405  Q
    |||||||||    
T  17914205 tatttaacc 17914197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 402
Target Start/End: Original strand, 26243329 - 26243482
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| ||||  |||||||||||||| |   ||| || ||||||||  ||||| ||||||| ||||||||||||||||||||||||    
T  26243329 ccactaactgtcacatcaacattcaattagagaattaacaccgtggacaaattttgataatggagataaaatgtgaggattttaaaaacatttaatgaaa 26243428  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 402  Q
    | ||| |||||||||||||||    || |||||||  |||||||||||||||||||||    
T  26243429 tatagagactattcttcaaag----gagcgcaaaatataaggactaaaaacatattta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 366
Target Start/End: Original strand, 9800288 - 9800398
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| |||| ||||||||||||||| || | |||||||| ||||||  |||| ||||||  ||||||||||||||||||||||||| || ||||||    
T  9800288 cacatcaacattctgttagagaattaacagcataaactaattttgataacgaagataaaatgtaaggattttaaaaacatttaatgaaatatatggacta 9800387  T
Q  356 ttcttcaaagg 366  Q
    |||||||||||    
T  9800388 ttcttcaaagg 9800398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 364
Target Start/End: Complemental strand, 44024380 - 44024262
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||| |||||||||||||||||||| ||  ||||||||| |||||| | ||| |||||||  ||||||||||||||||  ||||||    
T  44024380 cactaactgtcacatcaacattccgttagagaattaacaacattgactaattttgataacggggataaaatgtgatgattttaaaaacatttggtgaaat 44024281  T
Q  346 gtagggactattcttcaaa 364  Q
    ||| |||||||||||||||    
T  44024280 gtatggactattcttcaaa 44024262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 366
Target Start/End: Original strand, 21006056 - 21006177
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||| | |||||||||||||| ||| ||  ||||| |||||| ||||| ||||||| |||||||||||||||||||| |||    
T  21006056 ccactaactgccacatcagcatttcattagagaattaacagcagggatcaattttgataacggagataaaatgtgaggattttaaaaacatttaataaaa 21006155  T
Q  345 tgtagggactattcttcaaagg 366  Q
    ||||||||||||| ||||||||    
T  21006156 tgtagggactatttttcaaagg 21006177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 26720441 - 26720323
Alignment:
Q  282 aacatcagagactaatt-tgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaac 380  Q
    |||| |||||| ||||| || |||||||||  ||||||  |||||||||||| ||||||||||||||||||||||||||||||||    || |||||||     
T  26720441 aacagcagagattaattgtgttaacagagaaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaag----gagcgcaaaat 26720346  T
Q  381 gtaaggactaaaaacatatttaa 403  Q
    ||| |||||||||| ||||||||    
T  26720345 gtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 405
Target Start/End: Original strand, 12489517 - 12489616
Alignment:
Q  301 ataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatt 400  Q
    ||||||||||| ||||||  |||||||||||||| ||||||||||||| |||||||||||||    | || |||||||| ||||||||||||||||||||    
T  12489517 ataacagagataaaatgtaaggattttaaaaaca-ttaatgaaatgtaaggactattcttca---taacg-acgcaaaatgtaaggactaaaaacatatt 12489611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 44024478 - 44024397
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    |||||||||||| ||||| ||||||||| |||||||| |||||||  ||  |||||||| |||||||| |||||||||||||||||    
T  44024478 ggattttaaaaatatttattgaaatgtaaggactatttttcaaag--tc--acgcaaaatgtaaggaccaaaaacatatttaacct 44024397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 29917184 - 29917105
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||||||| |||  ||||||||||||||||    
T  29917184 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaacgtagggatcaaaaacatatttaacc 29917105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 404
Target Start/End: Complemental strand, 44148665 - 44148578
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    ||||||| ||||||||||||| |||| | |||||||||||||||||||||||     || || |||| ||| ||||||||||||||||||||    
T  44148665 aaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaa----agagcgtaaaatgtagggactaaaaacatatttaac 44148578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 348
Target Start/End: Complemental strand, 39234990 - 39234889
Alignment:
Q  248 actaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 346  Q
    |||||||  |||||||  |||||||||||||||||||| ||  |||||| ||||||||| ||||| ||||||| | ||||| |||| ||||||| |||||    
T  39234990 actaactgtcacatcagcattccgttagagaattaacagcattgactaattttgataactgagataaaatgtgagaatttttaaaatatttaataaaatg 39234891  T
Q  347 ta 348  Q
    ||    
T  39234890 ta 39234889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 406
Target Start/End: Original strand, 7344842 - 7344947
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 396  Q
    ||||||||| || || |||| || ||||||||||||||| |||| ||||||| ||| ||||||||||||    |  | ||||| ||||||||||||||||    
T  7344842 tttgataacggacataaaatatgaggattttaaaaacatataataaaatgtatggattattcttcaaag----gggcacaaaatgtaaggactaaaaaca 7344937  T
Q  397 tatttaacct 406  Q
    ||| ||||||    
T  7344938 tatataacct 7344947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 21005959 - 21006040
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||      |||||||| ||| |||| |||||||||||||||||    
T  21005959 ggattttaaaaacatttattgaaatgtaaggactatttttcaaag----ccacgcaaaatgtagggaccaaaaacatatttaacct 21006040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 344
Target Start/End: Complemental strand, 21005878 - 21005779
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||| ||| ||||||||||||||||  | ||| |||||| |||||| ||||| |||| ||  ||||||||||| |||||||||||    
T  21005878 ccactaactgccacatcaacatttcgttagagaattaacaggaaagaataattttgataacggagataaaatatgaagattttaaaaaaatttaatgaaa 21005779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 4624613 - 4624533
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| |||||||||  |||||||||||||||  ||  | ||||||  ||||||| ||||||||||||||||    
T  4624613 ggattttaaaaacatttattgaaatgtaaagactattcttcaaag--tc--atgcaaaatataaggaccaaaaacatatttaacc 4624533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 367
Target Start/End: Original strand, 10047832 - 10047934
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||||||  |||||| |||||| |||||||||| |||||| ||||| |||| ||   |||||||||| ||||||||| || ||  ||||||||||||||    
T  10047832 attccgttgtagaattgacatcaaagactaattttgataacggagataaaatatgaaaattttaaaaatatttaatgatatataaagactattcttcaaa 10047931  T
Q  365 gga 367  Q
    |||    
T  10047932 gga 10047934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 40304790 - 40304684
Alignment:
Q  295 aatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaa 394  Q
    |||||| ||||||| || ||||||| |||||||||||| ||||| | ||||||| ||||||||  ||||||    ||  |||||| ||| ||||||||||    
T  40304790 aatttggtaacagatataaaatgtgaggattttaaaaatatttacttaaatgtatggactatttatcaaag----gagtgcaaaatgtagggactaaaaa 40304695  T
Q  395 catatttaacc 405  Q
     ||||||||||    
T  40304694 tatatttaacc 40304684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 11089228 - 11089384
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaa-tgtgtggattttaaaaacatttaatgaa 343  Q
    |||||||||  |||||||| ||| ||||||| |||||||| |||| |||||||| | |||||||| | ||| | || |||||||||||| |||||| |||    
T  11089228 ccactaactgtcacatcaacatttcgttagataattaacagcaga-actaattttaataacagagctaaaaatatgaggattttaaaaatatttaacgaa 11089326  T
Q  344 atgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||  || ||||||| |||||| ||||    |||  |||| |||||||||||| ||||||    
T  11089327 atgtaatgattattctttaaaggagcgaa----aaatctaagaactaaaaacatacttaacc 11089384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 36155351 - 36155307
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    |||||||||||||||||| | |||||||||||||||| |||||||    
T  36155351 ggattttaaaaacatttattaaaatgtagggactattattcaaag 36155307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 20682787 - 20682744
Alignment:
Q  322 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 365  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaag 20682744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 21000794 - 21000759
Alignment:
Q  111 actgatatggctgatataagaggaccatatactgat 146  Q
    |||||||| |||||||||||||||||||||||||||    
T  21000794 actgatatagctgatataagaggaccatatactgat 21000759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 21010573 - 21010608
Alignment:
Q  111 actgatatggctgatataagaggaccatatactgat 146  Q
    |||||||| |||||||||||||||||||||||||||    
T  21010573 actgatatagctgatataagaggaccatatactgat 21010608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 405
Target Start/End: Original strand, 44803565 - 44803653
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||| | ||||||||||| |||| | ||||||||||||||||  ||||||    || ||||||| ||| |||||||| ||||||||||||    
T  44803565 aaatgtgagaattttaaaaacttttacttaaatgtagggactatttatcaaag----gagcgcaaaatgtagggactaaacacatatttaacc 44803653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 29917548 - 29917586
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  29917548 ggattttaaaaacatttattgaaatgtaaggactattct 29917586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 4694442 - 4694478
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| | ||||||||||||||||    
T  4694442 ggattttaaaaacatttacttaaatgtagggactatt 4694478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 22601576 - 22601540
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||| | ||||||||||||||||||    
T  22601576 attttaaaaacatttatttaaatgtagggactattct 22601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 24846040 - 24846004
Alignment:
Q  323 attttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  24846040 attttaaaaacatttattgaaatgtaaggactattct 24846004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 403
Target Start/End: Original strand, 108056 - 108210
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  ||||| |||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  108056 ccactaactgccacatcagcattccattagagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 108155  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 403  Q
    |||||| |  ||||||||||     |  ||||||| |||||||||||||||||||||||    
T  108156 tgtaggaataattcttcaaa----agggcgcaaaatgtaaggactaaaaacatatttaa 108210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 107878 - 107722
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||  |||||||  |||||||||||||||||||| ||  ||||| ||| |||||| ||||| ||||||| |||||||||||| ||||| |||||    
T  107878 ccactaactgtcacatcagcattccgttagagaattaacaacatggactatttttgataacggagataaaatgtgaggattttaaaaatatttattgaaa 107779  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||||||||||||||| ||    ||||  |||||| ||||||||||||||||||    
T  107778 tgtagggactattcttcaaaggagcg----caaagtgtaaggtctaaaaacatatttaacc 107722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 406
Target Start/End: Complemental strand, 107974 - 107894
Alignment:
Q  322 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||  |||  ||| |||| ||| |||| |||||||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaa--atc--acggaaaatgtagggaccaaaaacatatttaacct 107894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 257 - 404
Target Start/End: Original strand, 7645927 - 7646071
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| ||||||||||| |||||||| ||| ||||||||| |||||| ||||| ||||||| | ||||| |||||||||| ||||||||| ||||||    
T  7645927 cacatcaacattccgttagaaaattaacagcagggactaattttgataacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggacta 7646026  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    ||||||||||    || | ||||| ||||||||||||||||||||||||    
T  7646027 ttcttcaaag----gagcacaaaatgtaaggactaaaaacatatttaac 7646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 363
Target Start/End: Complemental strand, 17157702 - 17157584
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||||| |||||||  ||| |||||||||||||||| ||| ||||||||| ||||| |||||| ||||||| |||||||||||| |||||||||||    
T  17157702 ccactaactaccacatcagcatttcgttagagaattaacagcagtgactaattttgataatagagataaaatgtgaggattttaaaaatatttaatgaaa 17157603  T
Q  345 tgtagggactattcttcaa 363  Q
    |||| ||||||||||||||    
T  17157602 tgtatggactattcttcaa 17157584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 247 - 363
Target Start/End: Complemental strand, 21113184 - 21113067
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||  |||||||||||||||||||| ||||||||||||| |||||  ||||| ||||||| | |||||||||||||||||||||||    
T  21113184 cactaactgccacatcagcattccgttagagaattaacagcagagactaattttgataaaggagataaaatgtgagaattttaaaaacatttaatgaaat 21113085  T
Q  346 gtagggactattcttcaa 363  Q
    |||| |||||||||||||    
T  21113084 gtagagactattcttcaa 21113067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 257 - 405
Target Start/End: Complemental strand, 5974156 - 5974011
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||  |||||||||||||||||||| ||  ||||||||| | |||| || || ||||||| |||||||||||||||||||||||||||||||||||    
T  5974156 cacatcagcattccgttagagaattaacaacatggactaattttaataacggaaataaaatgtggggattttaaaaacatttaatgaaatgtagggacta 5974057  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||    |   ||||||  ||||||||||||||||||||||||    
T  5974056 ttcttcaaag----gggtgcaaaatataaggactaaaaacatatttaacc 5974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 257 - 405
Target Start/End: Original strand, 8710286 - 8710430
Alignment:
Q  257 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 355  Q
    |||||||| |||||||||||||||||||| ||  ||||||||| | |||| || || ||||||| |||||||||||||||||||||||||||| ||||||    
T  8710286 cacatcaacattccgttagagaattaacaacatggactaattttaataac-gaaataaaatgtggggattttaaaaacatttaatgaaatgtaaggacta 8710384  T
Q  356 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||    |   ||||||  ||||||||||||||||||||||||    
T  8710385 ttcttcaaag----gggtgcaaaatataaggactaaaaacatatttaacc 8710430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 404
Target Start/End: Original strand, 14712963 - 14713095
Alignment:
Q  269 ccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 367  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||| || | ||||  |||||||||||||||||||| |||||||||||||||       
T  14712963 ccgttagagaattaacagcagagactaattttgataacagagataaaatatgagcatttctaaaacatttaatgaaatgtaaggactattcttcaaa--- 14713059  T
Q  368 tcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
      || ||||||| ||||| | ||||||||||||||||    
T  14713060 -agagcgcaaaatgtaagaattaaaaacatatttaac 14713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 405
Target Start/End: Complemental strand, 211529 - 211441
Alignment:
Q  313 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  211529 aaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 211441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 270 - 405
Target Start/End: Original strand, 211679 - 211811
Alignment:
Q  270 cgttagagaattaacatcagagactaatttgataacagagatcaaatgtgtggattttaaaaac-atttaatgaaatgtagggactattcttcaaaggat 368  Q
    ||||||||||||||||  || || |||||||||||  ||||| |||||||  |||||||||||  ||||||||||||||||||||||||||||||   ||    
T  211679 cgttagagaattaacagtagggattaatttgataatggagataaaatgtgaagattttaaaaaatatttaatgaaatgtagggactattcttcaa---at 211775  T
Q  369 cgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
     |  ||||||| ||||||| |||||||||||||||||    
T  211776 ag-gcgcaaaatgtaaggattaaaaacatatttaacc 211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 4510293 - 4510188
Alignment:
Q  297 tttgataacagagatcaaatgtgt-ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaac 395  Q
    ||||||||| ||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||   || |  || |||| |||||||||||||||    
T  4510293 tttgataaccgagataaaatatggaggattttaaaaacatttaatgaaatgtagggactattcttcaa---atag-gcgtaaaatgtaaggactaaaaac 4510198  T
Q  396 atatttaacc 405  Q
    ||||||||||    
T  4510197 atatttaacc 4510188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 25932339 - 25932431
Alignment:
Q  266 attccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||| ||||||| | ||||||| |||||| || ||||||||| |||||||    
T  25932339 attccgttagagaattaacggcagagactaattttgataacggagataaaatgtgagaattttaataacattgaacgaaatgtagtgactatt 25932431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 25932235 - 25932083
Alignment:
Q  246 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 344  Q
    |||||||| | |||||||  |||||||||||||| ||| | ||  ||||||||| |||||| ||||| |||||   ||||||||||||    ||||||||    
T  25932235 ccactaaccaacacatcagcattccgttagagaaataatagcatggactaattttgataacggagataaaatgcaaggattttaaaaa----taatgaaa 25932140  T
Q  345 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    || ||||||||||||||||||    ||| |||||| |||| ||||||||| ||||||||||    
T  25932139 tgcagggactattcttcaaag----gaaagcaaaatgtaaagactaaaaatatatttaacc 25932083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 405
Target Start/End: Original strand, 17157856 - 17157923
Alignment:
Q  334 atttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    ||||||||||||||||||||||||||||||||  | |  ||||||| |||||||||||||||||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaag--tgg--cgcaaaatgtaaggactaaaaacatatttaacc 17157923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 1869555 - 1869503
Alignment:
Q  297 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtag 349  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  1869555 tttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtag 1869503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 20522167 - 20522209
Alignment:
Q  322 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  20522167 gattttaaaaacatttattgaaatgtagggactattcttcaaa 20522209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 34984554 - 34984633
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  34984554 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 34984633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 14712910 - 14712829
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 406  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||      |||||||| ||| |||| |||||||||||||||||    
T  14712910 ggattttaaaaacatttattgaaatgtaaggactatttttcaaag----tgacgcaaaatgtagggaccaaaaacatatttaacct 14712829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 14257226 - 14257188
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  14257226 ggattttaaaaacatttattgaaatgtagggactattct 14257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 14257588 - 14257626
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  14257588 ggattttaaaaacatttattgaaatgtagggactattct 14257626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 20824243 - 20824205
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  20824243 ggattttaaaaacatttattgaaatgtagggactattct 20824205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 33107371 - 33107450
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  33107371 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 33107450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 404
Target Start/End: Original strand, 6162698 - 6162776
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    |||||||||||||||||| |||||||||| |||||||| |||||  ||||  ||||||| ||| |||| |||||||||||||||    
T  6162698 ggattttaaaaacatttattgaaatgtagagactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaac 6162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 19595659 - 19595698
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  19595659 ggattttaaaaatatttattgaaatgtagggactattctt 19595698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 15147797 - 15147759
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  15147797 ggattttaaaaacatttattgaaatgtagggattattct 15147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 360
Target Start/End: Original strand, 19579193 - 19579251
Alignment:
Q  302 taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 360  Q
    |||||||||| |||| |  |||||||||||||||||| ||||||| || ||||||||||    
T  19579193 taacagagataaaatatagggattttaaaaacatttattgaaatgcagagactattctt 19579251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 20824605 - 20824643
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  20824605 ggattttaaaaacatttattgaaatgtagggattattct 20824643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 34527746 - 34527713
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt 299  Q
    |||||||||||||||||||| |||||||||||||    
T  34527746 attccgttagagaattaacaacagagactaattt 34527713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 15148159 - 15148195
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  15148159 ggattttaaaatcatttattgaaatgtagggactatt 15148195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 20521265 - 20521225
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattcttc 361  Q
    |||||||||||||||||  |||||| |||||||||||||||    
T  20521265 ggattttaaaaacattttttgaaatatagggactattcttc 20521225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 404
Target Start/End: Original strand, 35127 - 35281
Alignment:
Q  247 cactaactagcacatcaatattccgttagagaattaacatcagagactaatttg-ataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 345  Q
    ||||||||  |||||||| |||| |||||||| |||| | || | ||||||||  ||||| ||||| ||||||| |||||||||||||||| ||| ||||    
T  35127 cactaactcccacatcaacattctgttagagagttaagagcataaactaattttcataaccgagataaaatgtgaggattttaaaaacattcaataaaat 35226  T
Q  346 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 404  Q
    |||| ||||||||||||||||     |||||||| ||||||||||||||||||||||||    
T  35227 gtagagactattcttcaaaggg----acgcaaaatgtaaggactaaaaacatatttaac 35281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 403
Target Start/End: Complemental strand, 34925 - 34794
Alignment:
Q  269 ccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 367  Q
    |||||||| |||||| | ||||||||||||| |||||| ||||| ||||||| | | |||||||||||||||||||||||| |||| ||| |||||   |    
T  34925 ccgttagaaaattaatagcagagactaattttgataacggagataaaatgtgagtactttaaaaacatttaatgaaatgtatggaccattattcaa---a 34829  T
Q  368 tcgaacgcaaaacgtaaggactaaaaacatatttaa 403  Q
    | | ||||||||  ||||||||||||||||||||||    
T  34828 tag-acgcaaaatataaggactaaaaacatatttaa 34794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 405
Target Start/End: Complemental strand, 627 - 491
Alignment:
Q  266 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 364  Q
    ||||||||||| || ||||| || |||||||||| ||||||| | || |||||||   |||||||||||||||||||||||||| | || | || |||||    
T  627 attccgttagaaaaataacaacatagactaattttgataacaaaaataaaatgtgaaaattttaaaaacatttaatgaaatgtaagaacaactcgtcaaa 528  T
Q  365 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 405  Q
     |||    |||||||  |||| |||||||||||||||||||    
T  527 tgat----cgcaaaatctaagaactaaaaacatatttaacc 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 39862 - 39900
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  39862 ggattttaaaaacatttattgaaatgtagggactattct 39900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 39500 - 39462
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactattct 359  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  39500 ggattttaaaaacatttattgaaatgtagggattattct 39462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 29354 - 29318
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  29354 ggattttaaaaacatttattgaaatgtaaggactatt 29318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 33004 - 33040
Alignment:
Q  321 ggattttaaaaacatttaatgaaatgtagggactatt 357  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  33004 ggattttaaaaacatttattgaaatgtaaggactatt 33040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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