View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1758_high_17 (Length: 396)
Name: NF1758_high_17
Description: NF1758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1758_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 31 - 380
Target Start/End: Original strand, 6515023 - 6515372
Alignment:
| Q |
31 |
tgaaccttaaagttttactttactaattatatgatgttgtgtattttcttgtctcattactttataaaggaaaccattcaaagatgcaaacaaagcttgg |
130 |
Q |
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| T |
6515023 |
tgaaccttaaagttttactctactaattatatgatgttgtgtattttcttgtctcattactttataaaggaaaccattcaaagatgcaaacaaagcctgg |
6515122 |
T |
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| Q |
131 |
gaaccattacatgatgtgaaagatgttacactgatgacaccatgtaaatccaatattcttgaagataacaattcacccagaggtccaagattatcagccg |
230 |
Q |
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| T |
6515123 |
gaaccattacatgatatgaaagatgttacactgatgacaccatgtaaatccaatattcttgaagataacaattcacccagaggtccaagattatcagccg |
6515222 |
T |
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| Q |
231 |
gaagctcctcgtcgcaaacttcatcgaatagaagttctcctgccaatagtaatgatagttcagggaaacatggaaatcatgaagttataaattcagacaa |
330 |
Q |
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| T |
6515223 |
gaagctcctcgtcgcaaacttcatcgaatagaagttctcctgccaatagtaatgatagttcagggaaacatggaaatcatgaagttataaattcagacaa |
6515322 |
T |
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| Q |
331 |
tactaagtgcttactttcttcaaaaccaccagtaagtacacatgcccttt |
380 |
Q |
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| T |
6515323 |
tactaagcgcttactttcttcaaaaccaccagtaagtacacatgcccttt |
6515372 |
T |
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