View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1758_high_45 (Length: 249)
Name: NF1758_high_45
Description: NF1758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1758_high_45 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 33968464 - 33968239
Alignment:
| Q |
1 |
tatttgatacgtgaatagtttcatttaaattgtcatgcagacatcatgtgaaaactttaattatagattagaacctaaaaatcacttttttaggagaact |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
33968464 |
tatttgatacgtgaatagtttcatttaaattgtcatgcagacatcatgtgaaaactttaattatagattagaacctaaaaaacacttttttaggagaact |
33968365 |
T |
|
| Q |
101 |
aacaacacccatagaaatacaagagcaaaacgtataaagaaaatcaaagttgactggatgagaagtactaatgttgtttcctcaacacaaaaagaactaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33968364 |
aacaacacccatagaaatacaagagcaaaacgtataaagaaaatcaaagttgtctggatgagaagtactaatgttgtttcctcaacacaaaaagaactaa |
33968265 |
T |
|
| Q |
201 |
tgttgggtataacaattactctatga |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
33968264 |
tgttgggtataacaattactctatga |
33968239 |
T |
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