View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1758_high_47 (Length: 242)
Name: NF1758_high_47
Description: NF1758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1758_high_47 |
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Alignment Details
Target: chr3 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44530328 - 44530439
Alignment:
| Q |
1 |
ttttgttaggcagtttgcattagaaacaatactttataggctgcttttttatatgtgaagtgattatgtcaattttacctaagatgaagctagagctttc |
100 |
Q |
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| T |
44530328 |
ttttgttaggcagtttgcattagaaacaatactttataggctgcttttttatatgtgaagtgattatgtcaattttacc-aagatggagctagagctttc |
44530426 |
T |
|
| Q |
101 |
atacttgagcttg |
113 |
Q |
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||||||||||||| |
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| T |
44530427 |
atacttgagcttg |
44530439 |
T |
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