View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1758_high_6 (Length: 493)
Name: NF1758_high_6
Description: NF1758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1758_high_6 |
 | |
|
| [»] scaffold0083 (2 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 458; Significance: 0; HSPs: 52)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 9 - 474
Target Start/End: Original strand, 10501306 - 10501771
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10501306 |
gattattctcaaggcgaaaaaacggcggaggaagtcggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
10501405 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10501406 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
10501505 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10501506 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgcgaagcttcctacccatttac |
10501605 |
T |
|
| Q |
309 |
atcggacccatttacttatggtgggcccaaaatcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctat |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10501606 |
atcggacccatttacttatggtgggcccaaaatcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctat |
10501705 |
T |
|
| Q |
409 |
ccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10501706 |
ccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtgcaaatgaggtatctag |
10501771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 9 - 458
Target Start/End: Original strand, 10528090 - 10528524
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
|||| |||||||| | ||||| ||| |||||||| |||||||| | |||| |||||||| || ||||| |||||||| ||||||||| ||| || | |
|
|
| T |
10528090 |
gattgttctcaagagggaaaaatggcagaggaagtaggtgatgactgctttgctgaattgttgtccagatccttaattcagcaatcaaatcatgttggtc |
10528189 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
||||| |||||| | |||||||||||||||| || |||||||| ||| || |||| ||||||||||||| |||| ||||||||||||| | |||||||| |
|
|
| T |
10528190 |
gtggaaaaaagtttttcatgcatgaccttgtcaacgatttagctacaatcgtatctggaaaaagttgttacaggcttgaatgtggtaatgtctctaaaaa |
10528289 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
| ||| |||||||||||||| |||| | | |||||||| |||||||||||| || | |||| ||||||| ||||||||| |||||||| | |
|
|
| T |
10528290 |
tgtcctccatttgtcatatacccaagaagtgtatgacattttcatgaagtttaaaagtttcaacaattttaaatgcttgtgaagcttcat---------- |
10528379 |
T |
|
| Q |
309 |
atcggacccatttacttatggtgggcccaaaatcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctat |
408 |
Q |
| |
|
||||||| ||||||| | | |||||| ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
10528380 |
-----gcccatttgcttatggagagaacaaaattacttatccaccaaggtagttgatgatttgctaccaacactcaaaaggttgcgtgtgttatcgctgt |
10528474 |
T |
|
| Q |
409 |
ccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtg |
458 |
Q |
| |
|
| ||||||||||| |||||||||||||| |||| |||||||||||||||| |
|
|
| T |
10528475 |
caaagtatacaaatatcaccaagctacctgattaaattggcaatttggtg |
10528524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 9 - 305
Target Start/End: Original strand, 10032735 - 10033031
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
|||| ||||||||| | ||||| | ||||||| | || ||||||| ||||| |||||| |||| ||||||||||||||||||| || ||||||||| |
|
|
| T |
10032735 |
gattgttctcaagggggaaaaaagttggaggaattaggcgatgattgttttgctgaattgctatcgagatcgttaattcaacaattaagcgatgatgctc |
10032834 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||| |||| ||| |||| |
|
|
| T |
10032835 |
gtggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattcatattaggaaaaagttgttgcaggcttgaatgtggtgacatctctgaaaa |
10032934 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
| | || || || |||||||||||| | | ||||||| |||||||||||| |||| || |||||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
10032935 |
tgttcgtcacttctcatataaccaagaatactatgacattttcatgaagtttgagaaattatacaatttcaaatgcttgcgaagctttctatccatt |
10033031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 35 - 305
Target Start/End: Original strand, 10127686 - 10127956
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||||||| ||||| ||||||||||||| || ||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
10127686 |
ggaggaattaggtgatgattgttttgctgaattgttatcgagatcattaattcaacaattaagcgatgatgctcgtggagaaaagtttgtcatgcatgac |
10127785 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||||| ||||||||| | |||||| ||||||||||||||||||||||| ||||||||||| |||| ||| ||||| | || || || |||||||||||| |
|
|
| T |
10127786 |
cttgtcaatgatttatctacattcgtatcaggaaaaagttgttgcaggcttgaatgtggtgacatctctgaaaatgttcgtcacttctcatataaccaag |
10127885 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
| | ||||||| |||||||||||| |||| || |||||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
10127886 |
aatactatgacattttcatgaagtttgagaaattatacaatttcaaatgcttgcgaagctttctatccatt |
10127956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 49 - 474
Target Start/End: Complemental strand, 10375142 - 10374729
Alignment:
| Q |
49 |
atgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgattt |
148 |
Q |
| |
|
|||||| ||||| |||||||||| ||||| ||||||||||||| || ||||||||||||||| |||||| |||||||||||||||||| |||||||| |
|
|
| T |
10375142 |
atgattgttttgctgaattgttattgagatcattaattcaacaattaagcgatgatgcttgtggaaaaaagtttgtcatgcatgaccttgtcaatgattt |
10375043 |
T |
|
| Q |
149 |
agcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaat |
248 |
Q |
| |
|
| | |||||| |||||||||||||||||| |||| ||||||| | | |||| || ||||| | || || || |||||||||||||| ||||||| | |
|
|
| T |
10375042 |
atctacattcgtatcaggaaaaagttgttacaggcttgaatgcgatgacatccctgaaaatgttcgtcacttctcatataaccaaaaattctatgacatt |
10374943 |
T |
|
| Q |
249 |
ttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttacatcggacccatttacttatggtgggcccaaaatcacttat |
348 |
Q |
| |
|
||||||||||| |||| || |||||||||||||||||| ||||||| ||| ||| || | |||||| | | | | |||| |||||| |
|
|
| T |
10374942 |
ttcatgaagtttgagaaattatacaatttcaaatgcttgcgaagctttctatccacttcc-----tcccattcattcaatg-------aaaactacttat |
10374855 |
T |
|
| Q |
349 |
ccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattgg |
448 |
Q |
| |
|
|| | ||||||||||||||| |||| ||| || |||||| ||||||||||||| ||||| | ||||||||||||||| || |||||||||||||||| |
|
|
| T |
10374854 |
ccttcaaggtggttgatgatctgctcccatcacaaaaaaggctgcgtgtgttatcactatcgaggtatacaaacatcactaaattaccagattcaattgg |
10374755 |
T |
|
| Q |
449 |
caatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
||||||||||||| || ||||||||| |
|
|
| T |
10374754 |
caatttggtgcaattgcggtatctag |
10374729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 45 - 308
Target Start/End: Original strand, 11770002 - 11770265
Alignment:
| Q |
45 |
ggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatg |
144 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||| ||| |||||||||||||| |||| |
|
|
| T |
11770002 |
ggtgatgattggtttgctgaattgttatcgagatcgttaattcaacaattaagtgatgatgctcgtggagaaaagtttgttatgcatgaccttgtaaatg |
11770101 |
T |
|
| Q |
145 |
atttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatga |
244 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| | || || || |||||||||||| | | ||||| |
|
|
| T |
11770102 |
atttagctacattcatatcaggaaaaagttgttgcaggcttgaatgtggtgacatccataaaaatgttcgtcacttctcatataaccaagaatactatga |
11770201 |
T |
|
| Q |
245 |
caatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
|| |||||| ||||| |||| || || | |||||||||||| ||||||||||| ||| |||| |
|
|
| T |
11770202 |
cattttcatcaagtttgagaaattatatagcttcaaatgcttgcgaagcttcctatccacttac |
11770265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 9 - 308
Target Start/End: Complemental strand, 11781319 - 11781020
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| || |||||||| |
|
|
| T |
11781319 |
gattattctcaaggcgaaaatgtggtggaggaagttggtgatgattgttttgctgaattgttatcaagatcgttaattcaacaattaagcaatgatgctc |
11781220 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
|| ||| |||| |||||||||||||||||| ||||||||||| |||||| |||||| |||||||||||| || ||||||||||| |||| ||||||| |
|
|
| T |
11781219 |
atgaagagaagtttgtcatgcatgaccttgtcaatgatttagctacattcgtatcagcaaaaagttgttgtagacttgaatgtggtgacatccctaaaaa |
11781120 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
| | || || || |||||||||||| | | |||||| |||||| ||||| |||| || |||| |||||||||||| ||||||||||| ||| |||| |
|
|
| T |
11781119 |
tgttcgacacttctcatataaccaagaataccatgacattttcattaagtttgagaaattatacagcttcaaatgcttgcgaagcttcctatccacttac |
11781020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 35 - 299
Target Start/End: Complemental strand, 10363109 - 10362845
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||||||| ||||||||||||||||||| || |||||| | |||| ||||| | ||||||||||||| |
|
|
| T |
10363109 |
ggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgatcgtggggaaaaatttgtcatgcatgac |
10363010 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| | ||||| | || || || |||||||||||| |
|
|
| T |
10363009 |
cttgttaatgatttagcaacattcgtatcaggaaaaagttgttgcaggcttgaatgtggtgacatccttgaaaatgttcgtcacttctcatataaccaag |
10362910 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttccta |
299 |
Q |
| |
|
| | ||||||| |||||||||||| |||| || ||||||| ||||| ||| ||||||||||| |
|
|
| T |
10362909 |
aatactatgacattttcatgaagtttgagaaattacacaattttaaatgtttgcgaagcttccta |
10362845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 9 - 305
Target Start/End: Complemental strand, 13854017 - 13853721
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
|||| ||||||||| | ||||| | | |||||| |||||||||||| ||| | ||||||| ||| ||||| ||||||||||||||||||||||||| || |
|
|
| T |
13854017 |
gattgttctcaagggggaaaaatgactgaggaatttggtgatgattgctttcttgaattgtcatccagatccttaattcaacaatcaaatgatgatggtt |
13853918 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
|||| ||| | | |||||||||||||||| || || ||||| ||| || |||||||||||||||||||||||| ||||| |||| |||| || |||| |
|
|
| T |
13853917 |
ttggaaaaatctttttcatgcatgaccttgtcaacgacttagctacagtcgtatcaggaaaaagttgttgcaggtgtgaatttggtgacatctccaaaac |
13853818 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
| | || ||||| |||||||||||| | | |||||||| ||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13853817 |
tgttcgtcatttctcatataaccaagaagtgtatgacattttcagaaagtttgagaaaatctacaatttcaaatgcttgcgaagcttcctacccatt |
13853721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 35 - 299
Target Start/End: Original strand, 9839619 - 9839883
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||||||| ||||||||||||||||||| || ||||||| | |||| ||||| | ||||||||||||| |
|
|
| T |
9839619 |
ggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgac |
9839718 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| || ||||| | || || || |||||||||||| |
|
|
| T |
9839719 |
cttgtcaatgatttagctacattcgtatcaggaaaaagttgttgcaggcttgaatgtggtgacatccctgaaaatgttcgtcacttctcatataaccaag |
9839818 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttccta |
299 |
Q |
| |
|
| | || |||| |||||||||||| |||| || ||||||| ||||| ||| ||||||||||| |
|
|
| T |
9839819 |
aaaactacgacattttcatgaagtttgagaaattacacaattttaaatgtttgcgaagcttccta |
9839883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 35 - 299
Target Start/End: Original strand, 9850497 - 9850761
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||||||| ||||||||||||||||||| || ||||||| | |||| ||||| | ||||||||||||| |
|
|
| T |
9850497 |
ggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgac |
9850596 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| || ||||| | || || || |||||||||||| |
|
|
| T |
9850597 |
cttgtcaatgatttagctacattcgtatcaggaaaaagttgttgcaggcttgaatgtggtgacatccctgaaaatgttcgtcacttctcatataaccaag |
9850696 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttccta |
299 |
Q |
| |
|
| | || |||| |||||||||||| |||| || ||||||| ||||| ||| ||||||||||| |
|
|
| T |
9850697 |
aaaactacgacattttcatgaagtttgagaaattacacaattttaaatgtttgcgaagcttccta |
9850761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 35 - 299
Target Start/End: Original strand, 10581368 - 10581632
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| |||||| ||||||||||| ||||||||||||||||||| || ||||||| | |||| ||||| | ||||||||||||| |
|
|
| T |
10581368 |
ggaggaattaggtgatgattgttttgttgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgac |
10581467 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| || ||||| | || || || |||||||||||| |
|
|
| T |
10581468 |
cttgtcaatgatttagctacattcgtatcaggaaaaagttgttgcaggcttgaatgtggtgacatccctgaaaatgttcgtcacttctcatataaccaag |
10581567 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttccta |
299 |
Q |
| |
|
| | | ||||| |||||||||||| |||| || |||||| ||||| ||| ||||||||||| |
|
|
| T |
10581568 |
aatactttgacattttcatgaagtttgagaaattacacaattgtaaatgtttgcgaagcttccta |
10581632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 35 - 308
Target Start/End: Original strand, 10664284 - 10664557
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||||||| ||||| |||||||||||||||| ||||||||| ||| ||||||| ||| ||||||||| |
|
|
| T |
10664284 |
ggaggaattaggtgatgattgttttgctgaattgttatcgagatctttaattcaacaatcaagcgatgatgctcatggcgaaaagtttgtgatgcatgac |
10664383 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||| | ||||||||||| |||||| |||||||||||| |||||||||| ||||||||||| |||| || ||||| | || || || |||||||||||| |
|
|
| T |
10664384 |
cttatcaatgatttagctacattcgtatcaggaaaaatttgttgcaggcttgaatgtggtgacatgcctgaaaatgttcgtcacttctcatataaccaag |
10664483 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
| || ||||||| |||||||||||| |||| || | || ||||| |||||| ||||||||||| ||| |||| |
|
|
| T |
10664484 |
aagactatgacattttcatgaagtttgagaaattaaaaaacttcaactgcttgcgaagcttcctatccacttac |
10664557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 45 - 474
Target Start/End: Original strand, 10185010 - 10185424
Alignment:
| Q |
45 |
ggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatg |
144 |
Q |
| |
|
|||||||||| |||| ||||| || || ||||| ||||||||||||||||||||| ||| | |||||||||||| | |||||||||||||||| |||| |
|
|
| T |
10185010 |
ggtgatgattgctttgctgaattattgtccagatccttaattcaacaatcaaatgataatggtcgtggagaaaagtttttcatgcatgaccttgtcaatg |
10185109 |
T |
|
| Q |
145 |
atttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatga |
244 |
Q |
| |
|
|||| || ||| || |||| |||||||||||||||||||||||||||||||| || ||| ||||| | || ||| | ||||||| ||| | |||||||| |
|
|
| T |
10185110 |
atttggctacagtcgtatctggaaaaagttgttgcaggtttgaatgtggtaatatctctgaaaatgttcgtcatgtttcatatattcaagaagagtatga |
10185209 |
T |
|
| Q |
245 |
caatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttacatcggacccatttacttatggtgggcccaaaatcac |
344 |
Q |
| |
|
|| | | ||||| ||| |||| ||||||| ||||||||| ||| ||| || ||| ||| || | ||| || | | ||| || |
|
|
| T |
10185210 |
catcgtaacaaagtttaagcctttccacaatttgaaatgcttgcgaacctttct---------------acctattcacgtttggaggtgcaacaattac |
10185294 |
T |
|
| Q |
345 |
ttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaa |
444 |
Q |
| |
|
|||||| | |||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||| ||| ||| |
|
|
| T |
10185295 |
ttatccttcaaggtggttgatgatttgataccatcactcaaaaggttgcgcgtgttatctctatcaaagtataaaaacatcaccaagctacctgatacaa |
10185394 |
T |
|
| Q |
445 |
ttggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
||||||| || |||||| || | ||||||| |
|
|
| T |
10185395 |
ttggcaagttagtgcaattgcgatatctag |
10185424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 9 - 296
Target Start/End: Original strand, 10261430 - 10261717
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
|||| ||||||||| | ||||| | ||||||| | || ||||||| ||||| ||||||||||| ||||||||||||||||||| || ||||||||| |
|
|
| T |
10261430 |
gattgttctcaagggggaaaaaagttggaggaattaggcgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgctc |
10261529 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
|||||||||||| |||||||||||||||||| | ||||||||| ||| | |||| ||||||||||| |||||| ||||||||||| |||| || |||| |
|
|
| T |
10261530 |
gtggagaaaagtttgtcatgcatgaccttgtcagtgatttagctacagttgtatcgggaaaaagttgctgcaggcttgaatgtggtgacatcactgaaaa |
10261629 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttc |
296 |
Q |
| |
|
| | || || || |||||||||||| | | ||||||| |||||||||||| |||| || |||| |||||||||||| |||||||| |
|
|
| T |
10261630 |
tgttcgtcacttctcatataaccaagaatactatgacattttcatgaagtttgagaaattacacaacttcaaatgcttgcgaagcttc |
10261717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 9 - 306
Target Start/End: Original strand, 10672414 - 10672711
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
|||| |||||||| | ||||| ||| |||||||| |||||||| | |||| |||||||| || ||||| |||||||| ||||||||||||| || | |
|
|
| T |
10672414 |
gattgttctcaagagggaaaaatggcagaggaagtaggtgatgactgctttgctgaattgttgtccagatccttaattcagcaatcaaatgatgttggtc |
10672513 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
||||| |||||| | |||| ||||||||| | || |||||| | ||| || |||| ||||||||||||| |||| ||||||||||||| | |||||||| |
|
|
| T |
10672514 |
gtggaaaaaagtttttcatacatgaccttatcaacgatttaactacagtcgtatctggaaaaagttgttccaggcttgaatgtggtaatgtctctaaaaa |
10672613 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccattt |
306 |
Q |
| |
|
| ||| |||||||||||||| |||| | | |||||||| |||||||||||| || | |||| ||||||| ||||||||| |||||||| | ||||||| |
|
|
| T |
10672614 |
tgtcctccatttgtcatatacccaagaagtgtatgacattttcatgaagtttaaaagtttcaacaattttaaatgcttgtgaagcttcatgcccattt |
10672711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 9 - 287
Target Start/End: Original strand, 10518217 - 10518495
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
||||||||||||| ||||| || ||||||| |||||||||||| ||||| ||||| ||||| ||||| ||||||||||||| || |||||||| |
|
|
| T |
10518217 |
gattattctcaagatgaaaatgcgatggaggaaattggtgatgattgttttgctgaattattatcaagatcattaattcaacaattaagcaatgatgctc |
10518316 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
|| | |||||| |||||||||||||||||| | |||||||| |||||| | ||||||||||||||||||||| ||||||||||| |||| || |||| |
|
|
| T |
10518317 |
atgaaaaaaagtgtgtcatgcatgaccttgtccacgatttagctacattcgtctcaggaaaaagttgttgcaggcttgaatgtggtgacatccctgaaaa |
10518416 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttg |
287 |
Q |
| |
|
| || || || |||||||||||| | | ||||||| |||||||||||| |||| || |||||||||||||||||| |
|
|
| T |
10518417 |
ggttcgtcacttctcatataaccaagaatactatgacattttcatgaagtttgagaaattatacaatttcaaatgcttg |
10518495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 342 - 474
Target Start/End: Original strand, 10678491 - 10678623
Alignment:
| Q |
342 |
cacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagatt |
441 |
Q |
| |
|
|||||||||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||| |
|
|
| T |
10678491 |
cacttatccaccaaggtagtcgatgatttgctaccaacactcaaaaggttgcgtgtgttatcgctgtcaaagtatacaaatatcaccaagctacctgatt |
10678590 |
T |
|
| Q |
442 |
caattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
||||||||||||||||||| || ||||||||| |
|
|
| T |
10678591 |
caattggcaatttggtgcagttgcggtatctag |
10678623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 35 - 308
Target Start/End: Complemental strand, 10433355 - 10433082
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | ||| |||||| ||||| ||||||||||| |||||||||||||||| || || ||||||| | |||||||||||| ||||||||||||| |
|
|
| T |
10433355 |
ggaggaattaggtaatgattgttttgctgaattgttatcgagatcgttaattcaacgattaaccgatgatgatcgtggagaaaagtttgtcatgcatgac |
10433256 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||||| ||||||||| | |||||| |||||||||||||||||| ||| |||||||||| |||| | ||||| | || || || |||||||||||| |
|
|
| T |
10433255 |
cttgtcaatgatttatctacattcgtatcaggaaaaagttgttccagacttgaatgtggggacatccttgaaaatgttcgtcacttctcatataaccaag |
10433156 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
| |||||| |||||||||||| |||| || |||||||||||||| || ||||||||||| ||||||| |
|
|
| T |
10433155 |
aaatccatgacattttcatgaagtttgagaaattacacaatttcaaatgcctgcgaagcttcctatgcatttac |
10433082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 75 - 436
Target Start/End: Original strand, 10078067 - 10078413
Alignment:
| Q |
75 |
agatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagtt |
174 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| | |||||||||||| | |||||||||||||||| |||||||| || ||| || |||| |||||||||| |
|
|
| T |
10078067 |
agatccttaattcaacaatcaaatgataatggtcgtggagaaaagtttttcatgcatgaccttgtcaatgatttggctacagtcgtatctggaaaaagtt |
10078166 |
T |
|
| Q |
175 |
gttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaa |
274 |
Q |
| |
|
|||||||||||||||||||| | || ||| ||||| | || ||| | ||||||| ||| | |||||||| | | | | ||||| ||| |||| |||| |
|
|
| T |
10078167 |
gttgcaggtttgaatgtggtgatatctctgaaaatgttcgtcatgtttcatatattcaagaagagtatgatattgtaacaaagtttaagcctttccacaa |
10078266 |
T |
|
| Q |
275 |
tttcaaatgcttgagaagcttcctacccatttacatcggacccatttacttatggtgggcccaaaatcacttatccatgaaggtggttgatgatttgcta |
374 |
Q |
| |
|
||| ||||||||| ||| ||| || ||| ||| || | ||| || | | ||| |||||||| | ||||| ||||||||||||||| |
|
|
| T |
10078267 |
tttgaaatgcttgcgaacctttct---------------acctattcacgtttggaggtgcaacaattacttatcctttaaggtagttgatgatttgcta |
10078351 |
T |
|
| Q |
375 |
ccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctacc |
436 |
Q |
| |
|
||| ||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||| |
|
|
| T |
10078352 |
ccatcactcaaaaggttgcgcgtgttatctctatcaaagtataaaaacatcaccaagctacc |
10078413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 343 - 474
Target Start/End: Complemental strand, 11780997 - 11780866
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
|||||||| | ||||||||||||||||| |||||| || |||||||||||||||||||| ||||| | ||||| |||||||||||||||||||||||| |
|
|
| T |
11780997 |
acttatccttaaaggtggttgatgatttcctaccatcacaaaaaaggttgcgtgtgttatccctatcaaggtataaaaacatcaccaagctaccagattc |
11780898 |
T |
|
| Q |
443 |
aattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
|||||| ||||||||||| || ||||||||| |
|
|
| T |
11780897 |
aattggaaatttggtgcagttgcggtatctag |
11780866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 344 - 474
Target Start/End: Complemental strand, 13853697 - 13853567
Alignment:
| Q |
344 |
cttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattca |
443 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||| |||||| | ||||||||| ||||| || || |||||||||||||||||||||||||||||| || |
|
|
| T |
13853697 |
cttatccataaaggtggttgacaatttcctaccaacactcaacatgttgcgtgtattatcactttcaaagtatacaaacatcaccaagctaccagataca |
13853598 |
T |
|
| Q |
444 |
attggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
||||||||||| |||||| || ||||||||| |
|
|
| T |
13853597 |
attggcaatttagtgcaactgcggtatctag |
13853567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 343 - 459
Target Start/End: Original strand, 10089844 - 10089960
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || |||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
10089844 |
acttatccttgaaggtggttgatgatttgctaccatcacaaaaaaggttgcgtctgttatcactatcagggtatgcaaacatcaccaagctaccagattc |
10089943 |
T |
|
| Q |
443 |
aattggcaatttggtgc |
459 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
10089944 |
aattgggaatttggtgc |
10089960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 343 - 458
Target Start/End: Original strand, 10196727 - 10196842
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || |||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
10196727 |
acttatccttgaaggtggttgatgatttgctaccatcacaaaaaaggttgcgtctgttatcactatcagggtatgcaaacatcaccaagctaccagattc |
10196826 |
T |
|
| Q |
443 |
aattggcaatttggtg |
458 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
10196827 |
aattgggaatttggtg |
10196842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 343 - 474
Target Start/End: Original strand, 11770288 - 11770419
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
|||||||| | || |||||||||||||| |||||| || |||||||||||||||||||| ||||| | ||||| |||||||||||||||||||||||| |
|
|
| T |
11770288 |
acttatccttaaaagtggttgatgatttcctaccatcacaaaaaaggttgcgtgtgttatccctatcaaggtataaaaacatcaccaagctaccagattc |
11770387 |
T |
|
| Q |
443 |
aattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
|||||| ||||||||||| || ||||||||| |
|
|
| T |
11770388 |
aattggaaatttggtgcagttgcggtatctag |
11770419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 35 - 308
Target Start/End: Original strand, 10089548 - 10089821
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| |||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||| |
|
|
| T |
10089548 |
ggaggaattaggtgatgattgctttgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgctcgtggagaaaagtttgtcatgcatgac |
10089647 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||||| || ||||| || ||| ||||||| ||| ||||||||| ||| ||| ||||||| |||| || |||| | || ||| | |||||||| ||| |
|
|
| T |
10089648 |
cttgtcaacgatttggctacagtcatatctggacaaagttgtttcagacttggatgtggtgacatccctgaaaaggttcgtcatgtttcatataatcaag |
10089747 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
| |||||||| |||||||||||| ||| || | ||| |||||| |||| ||||||||||| | |||||| |
|
|
| T |
10089748 |
aactgtatgacattttcatgaagtttgcgaaattattcaacttcaaagtcttgcgaagcttcctatctatttac |
10089821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 35 - 308
Target Start/End: Original strand, 10196431 - 10196704
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| |||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||| |
|
|
| T |
10196431 |
ggaggaattaggtgatgattgctttgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgctcgtggagaaaagtttgtcatgcatgac |
10196530 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||||| || ||||| || ||| ||||||| ||| ||||||||| ||| ||| ||||||| |||| || |||| | || ||| | |||||||| ||| |
|
|
| T |
10196531 |
cttgtcaacgatttggctacagtcatatctggacaaagttgtttcagacttggatgtggtgacatccctgaaaaggttcgtcatgtttcatataatcaag |
10196630 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
| |||||||| |||||||||||| ||| || | ||| |||||| |||| ||||||||||| | |||||| |
|
|
| T |
10196631 |
aactgtatgacattttcatgaagtttgcgaaattattcaacttcaaagtcttgcgaagcttcctatctatttac |
10196704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 343 - 460
Target Start/End: Original strand, 10261752 - 10261869
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
|||||||| | ||||||||| |||||||||||||| || |||||||||||||||||||| ||||| | ||||| |||||||| ||||||||||||||| |
|
|
| T |
10261752 |
acttatccttcaaggtggttaatgatttgctaccatcacaaaaaaggttgcgtgtgttatcactatcaaggtataaaaacatcatcaagctaccagattc |
10261851 |
T |
|
| Q |
443 |
aattggcaatttggtgca |
460 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
10261852 |
aattggaaatttggtgca |
10261869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 343 - 474
Target Start/End: Original strand, 9839915 - 9840046
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
|||||||| | ||||||||| |||||||||||||| || |||||||||||||||||||| ||||| | ||||| |||||||| ||||||||| ||||| |
|
|
| T |
9839915 |
acttatccttcaaggtggttaatgatttgctaccatcacaaaaaaggttgcgtgtgttatcactatcgaggtataaaaacatcatcaagctacctgattc |
9840014 |
T |
|
| Q |
443 |
aattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
|||||| ||||||||||| || ||||||||| |
|
|
| T |
9840015 |
aattggaaatttggtgcagttgcggtatctag |
9840046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 343 - 474
Target Start/End: Original strand, 9850793 - 9850924
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
|||||||| | ||||||||| |||||||||||||| || |||||||||||||||||||| ||||| | ||||| |||||||| ||||||||| ||||| |
|
|
| T |
9850793 |
acttatccttcaaggtggttaatgatttgctaccatcacaaaaaaggttgcgtgtgttatcactatcgaggtataaaaacatcatcaagctacctgattc |
9850892 |
T |
|
| Q |
443 |
aattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
|||||| ||||||||||| || ||||||||| |
|
|
| T |
9850893 |
aattggaaatttggtgcagttgcggtatctag |
9850924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 344 - 474
Target Start/End: Original strand, 10664581 - 10664711
Alignment:
| Q |
344 |
cttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattca |
443 |
Q |
| |
|
||||||| | |||||| |||||||||||||| || || |||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||| || |
|
|
| T |
10664581 |
cttatccttaaaggtgcttgatgatttgctatcatcacaaaaaaggttgcgtgtgttatctctatcaaagtatgtaaacatcaccaaactaccagataca |
10664680 |
T |
|
| Q |
444 |
attggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
||||||||||| |||||| || ||||||||| |
|
|
| T |
10664681 |
attggcaatttagtgcaattgcggtatctag |
10664711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 354 - 470
Target Start/End: Original strand, 10518550 - 10518666
Alignment:
| Q |
354 |
aaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatt |
453 |
Q |
| |
|
||||||||||||||| |||| ||| || || ||||||||||||||||| || || | ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10518550 |
aaggtggttgatgatctgctcccatcacaaaacaggttgcgtgtgttatcactgtcaaggtatagaaacatcaccaagctaccagattcaattggcaatt |
10518649 |
T |
|
| Q |
454 |
tggtgcaaatgaggtat |
470 |
Q |
| |
|
|||||||| || ||||| |
|
|
| T |
10518650 |
tggtgcaattgcggtat |
10518666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 474
Target Start/End: Original strand, 10581664 - 10581795
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
|||||||| | |||||| |||||||||| ||||| || |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
10581664 |
acttatccttcaaggtgattgatgattttctaccgtcacaaaaaaggttgcgtgtgttatcgctatcagggtatcaaaacatcaccaagctaccagattc |
10581763 |
T |
|
| Q |
443 |
aattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
|||||| ||||||||||| || ||||||||| |
|
|
| T |
10581764 |
aattggaaatttggtgcagttgcggtatctag |
10581795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 301
Target Start/End: Complemental strand, 11130333 - 11130068
Alignment:
| Q |
39 |
gaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttg |
138 |
Q |
| |
|
||||| |||||||||| ||||| ||| ||||||| || || |||||||||||| | ||| |||| || | ||||||| || ||||||||| || ||| |
|
|
| T |
11130333 |
gaagtaggtgatgattgttttgcagaactgttatccaggtcattaattcaacaactacatgttgatactagaggagaaaggtttgtcatgcacgattttg |
11130234 |
T |
|
| Q |
139 |
ttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaa |
235 |
Q |
| |
|
||||||| ||||| ||| || |||| ||||||||||||| |||| |||||| ||||| || || |||||| | || |||| |||||||| ||| | |
|
|
| T |
11130233 |
ttaatgacttagctacactcgtatctggaaaaagttgttacagggttgaatttggtggtgacgcctccaaaaatgttcgtcattgctcatataatcaaga |
11130134 |
T |
|
| Q |
236 |
ggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacc |
301 |
Q |
| |
|
||||||||| | ||| |||||| |||| ||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
11130133 |
aaagtatgacactgtcaagaagtttaagattttctacaaattcaaatgcttgagaaccttcctacc |
11130068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 354 - 460
Target Start/End: Original strand, 10033065 - 10033171
Alignment:
| Q |
354 |
aaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatt |
453 |
Q |
| |
|
|||||||||||||||||||||||| || ||| |||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
10033065 |
aaggtggttgatgatttgctaccatcacaaaaacggttgcgtgttttatcactatcatggtatataaacatcaccaagctaccagattcaattggaaatt |
10033164 |
T |
|
| Q |
454 |
tggtgca |
460 |
Q |
| |
|
||||||| |
|
|
| T |
10033165 |
tggtgca |
10033171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 460
Target Start/End: Original strand, 10127990 - 10128096
Alignment:
| Q |
354 |
aaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatt |
453 |
Q |
| |
|
|||||||||||||||||||||||| || ||| |||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
10127990 |
aaggtggttgatgatttgctaccatcacaaaaacggttgcgtgttttatcactatcatggtatatgaacatcaccaagctaccagattcaattggaaatt |
10128089 |
T |
|
| Q |
454 |
tggtgca |
460 |
Q |
| |
|
||||||| |
|
|
| T |
10128090 |
tggtgca |
10128096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 10362772 - 10362682
Alignment:
| Q |
384 |
aaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |
|
|
| T |
10362772 |
aaaaggttgcgtgtgttatcgctatcagggtatgtaaacatcaccaagctaccagattcaattggaaatttggtgcagttgcggtatctag |
10362682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 10433018 - 10432928
Alignment:
| Q |
384 |
aaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |
|
|
| T |
10433018 |
aaaagattgcgtgtgttatcgctatcagggtataaaaacatcaccaagctaccagattcaattggaaatttggtgcagttgcggtatctag |
10432928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 45 - 302
Target Start/End: Original strand, 8862054 - 8862314
Alignment:
| Q |
45 |
ggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatg |
144 |
Q |
| |
|
|||||||||| ||||| ||| ||||||| ||||| |||||||||||| | ||| || | || | | | |||||| ||||||||||||||||||||||| |
|
|
| T |
8862054 |
ggtgatgattgttttgctgaactgttatccagatcattaattcaacaactacatgttggtactagagaacaaaagtttgtcatgcatgaccttgttaatg |
8862153 |
T |
|
| Q |
145 |
atttagcaacattcatatcaggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagta |
241 |
Q |
| |
|
||||||| ||| || |||| ||||||| |||| ||| |||||| ||||| | | || || ||| | || |||| ||||||| ||| | ||||| |
|
|
| T |
8862154 |
atttagctacaatcgtatctggaaaaacatgttctagggttgaatttggtggtgatacctccaagaatgttcgtcattgctcatatagtcaagaagagta |
8862253 |
T |
|
| Q |
242 |
tgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctaccc |
302 |
Q |
| |
|
||||| | ||| |||||| || | ||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
8862254 |
tgacattgtcaagaagtttaaaattttctacaaattcaaatgcttgagaaccttcctaccc |
8862314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 460
Target Start/End: Complemental strand, 11147869 - 11147752
Alignment:
| Q |
343 |
acttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattc |
442 |
Q |
| |
|
||||||| || |||||||| |||||||||||||| | | | ||||||||||||| ||||| |||| || |||||||||||||| | ||| |||||||| |
|
|
| T |
11147869 |
acttatctataaaggtggtcgatgatttgctacccacattaggaaggttgcgtgtgctatcgttatcaaaatatacaaacatcacaatgcttccagattc |
11147770 |
T |
|
| Q |
443 |
aattggcaatttggtgca |
460 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
11147769 |
aattggcagtttggtgca |
11147752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 460
Target Start/End: Original strand, 10890403 - 10890477
Alignment:
| Q |
386 |
aaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtgca |
460 |
Q |
| |
|
||||||||||||||||||| |||| || |||||||||||||| | ||| |||||||||||||||| ||||||||| |
|
|
| T |
10890403 |
aaggttgcgtgtgttatcgttatcaaaatatacaaacatcacaatgcttccagattcaattggcagtttggtgca |
10890477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 305
Target Start/End: Original strand, 13344875 - 13345117
Alignment:
| Q |
63 |
gaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatat |
162 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||||||||| | |||||| | ||| ||||| |||||||| ||||||||||| | | | | |
|
|
| T |
13344875 |
gaattgttatccaggtccttaattcaacaatcaaatgatgatg---gaaaagaaaaatttgttatgcacgaccttgtcaatgatttagcgttagtggtgt |
13344971 |
T |
|
| Q |
163 |
caggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagtt |
259 |
Q |
| |
|
|||||| |||||| | |||| |||||| |||||||||| ||||||||| | || |||||||||||||| ||| | || ||| ||||| |||||| |
|
|
| T |
13344972 |
caggaacaagttgcttcaggcttgaatgtggtggtaacatgtctaaaaatgttcgtcatttgtcatataatcaaggaaattacgactttttcaagaagtt |
13345071 |
T |
|
| Q |
260 |
gaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
|| | ||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
13345072 |
tgaggttctctacaatttcaagtgcttgcgaagcttcctacccatt |
13345117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 302
Target Start/End: Complemental strand, 11148161 - 11147895
Alignment:
| Q |
39 |
gaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttg |
138 |
Q |
| |
|
||||| |||||||||| ||||| ||| ||||||| ||||| ||||||||||| | ||| |||| || | ||||||| || ||||||||| || ||| |
|
|
| T |
11148161 |
gaagtaggtgatgattgttttgctgaactgttatccagatcattaattcaacagctacatgttgatactagaggagaaaggtttgtcatgcacgattttg |
11148062 |
T |
|
| Q |
139 |
ttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaa |
235 |
Q |
| |
|
||||||| ||||| ||| || |||| ||||||||||||| |||| |||||| ||||| || ||| || ||| | || |||| ||||| || ||| | |
|
|
| T |
11148061 |
ttaatgagttagctacactcgtatctggaaaaagttgttacagggttgaatttggtggtgacgcttccaagaatgttcgtcattgctcatacaatcaaga |
11147962 |
T |
|
| Q |
236 |
ggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctaccc |
302 |
Q |
| |
|
| ||||||||| | || |||||| ||| |||| |||| ||||||||||||||| |||||||||| |
|
|
| T |
11147961 |
gcagtatgacattgccaagaagtttaagcttttccacaaactcaaatgcttgagaaccttcctaccc |
11147895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 63 - 301
Target Start/End: Original strand, 10890092 - 10890333
Alignment:
| Q |
63 |
gaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatat |
162 |
Q |
| |
|
||||||||||||||||| |||||||| ||| |||||||| || ||| ||| | |||||||||||||||||||||||||||||| ||| || ||| |
|
|
| T |
10890092 |
gaattgttatctagatcattaattcagcaactgtatgatgattctgaaggacaaatatttgtcatgcatgaccttgttaatgatttagctacaatcgtat |
10890191 |
T |
|
| Q |
163 |
caggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagtt |
259 |
Q |
| |
|
| ||||||| ||||| ||| |||||| ||||| || | |||||| | || |||| |||||||| ||| | ||||||||| | ||| ||||| |
|
|
| T |
10890192 |
ctggaaaaacttgttatagggttgaatttggtggtgacgcccccaaaaatgttcgtcattgctcatataatcaagaaaagtatgacactgtcaaaaagtt |
10890291 |
T |
|
| Q |
260 |
gaagaatttctacaatttcaaatgcttgagaagcttcctacc |
301 |
Q |
| |
|
|||| ||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
10890292 |
taagattttctacaagttcaaattcttgagaaccttcctacc |
10890333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 302
Target Start/End: Complemental strand, 11159354 - 11159058
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
||||||||||| | ||||||| | ||| ||||| |||||||||| ||||| ||||||||||| ||||| |||||||||||| | ||| || | | |
|
|
| T |
11159354 |
gattattctcaggacgaaaaagccatggaagaagtaggtgatgattgttttgctgaattgttatccagatcattaattcaacaactacatgttggtacca |
11159255 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaat---gtggtaacatttctaa |
205 |
Q |
| |
|
| | |||||| |||||||||||||||||||||||||||||| ||| || |||| || |||| ||||| ||| |||||| ||||| | | || || |
|
|
| T |
11159254 |
gaaaacaaaagtttgtcatgcatgaccttgttaatgatttagctacaatcgtatctgggaaaacttgttatagggttgaatttggtggtgatacctccaa |
11159155 |
T |
|
| Q |
206 |
aaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctaccc |
302 |
Q |
| |
|
||| | || |||| ||||||| ||| | |||||||||| | | | |||||| || | ||||||||| |||||||||||||||| || ||||||| |
|
|
| T |
11159154 |
gaatgttcgtcattgctcatatagtcaagaagagtatgacattgtgaagaagtttaaaattttctacaaattcaaatgcttgagaacctacctaccc |
11159058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 305
Target Start/End: Complemental strand, 11245845 - 11245662
Alignment:
| Q |
122 |
tgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| | | || ||||||||||||||||| || | || ||| | ||| | | ||| ||||| || ||| |
|
|
| T |
11245845 |
tgtcatgcatgaccttgttaatgatttagctatagtcgtatcaggaaaaagttgtcacaagcttaaatttggcggtgataactctgaaaatggtcgtcat |
11245746 |
T |
|
| Q |
219 |
ttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
||||||||||| ||| |||||||||| | ||| |||||| ||| | ||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
11245745 |
ttgtcatataatcaa---gagtatgacattgtcaagaagtttcagattctctacaaattcaaatgcttgagaagctttctacccatt |
11245662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 305
Target Start/End: Original strand, 13161766 - 13162008
Alignment:
| Q |
63 |
gaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatat |
162 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||||||||| | |||||| | ||| ||||| |||||||| ||||||||||| | | | | |
|
|
| T |
13161766 |
gaattgttatccaggtccttaattcaacaatcaaatgatgatg---gaaaagaaaaatttgttatgcacgaccttgtcaatgatttagccttagtggtgt |
13161862 |
T |
|
| Q |
163 |
caggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagtt |
259 |
Q |
| |
|
|||||| |||||| | |||| |||||| |||||||||| ||||||||| | || ||||| |||||||| ||| || || ||| ||||| |||||| |
|
|
| T |
13161863 |
caggaacaagttgcttcaggcttgaatttggtggtaacatgtctaaaaatgttcgtcatttttcatataatcaaggagattacgactttttcaagaagtt |
13161962 |
T |
|
| Q |
260 |
gaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
|| | ||||| ||||||| |||||| ||||||| ||||||||| |
|
|
| T |
13161963 |
tgaggttctctacgatttcaagtgcttgcgaagctttctacccatt |
13162008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 13290415 - 13290617
Alignment:
| Q |
27 |
aaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtca |
126 |
Q |
| |
|
||||| || |||||||| ||| |||| || ||| | ||||||||||| || || ||||||||||||||||||||||||| | |||||| | ||| | |
|
|
| T |
13290415 |
aaaacagctgaggaagtaggtcatgactactttattgaattgttatccaggtccttaattcaacaatcaaatgatgatg---gaaaagaaaaatttgtta |
13290511 |
T |
|
| Q |
127 |
tgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtc |
223 |
Q |
| |
|
|||| |||||||| ||||||||||| | | | ||||||| |||||| | |||| |||||| |||||||||| ||||||||| | || ||||| || |
|
|
| T |
13290512 |
tgcacgaccttgtcaatgatttagccttagtggtgtcaggaacaagttgcttcaggcttgaatgtggtggtaacatgtctaaaaatgttcgtcatttttc |
13290611 |
T |
|
| Q |
224 |
atataa |
229 |
Q |
| |
|
|||||| |
|
|
| T |
13290612 |
atataa |
13290617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 305
Target Start/End: Original strand, 13333690 - 13333932
Alignment:
| Q |
63 |
gaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatat |
162 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||||||||| | |||||| | ||| ||||| |||||||| ||||||||||| | | | | |
|
|
| T |
13333690 |
gaattgttatccaggtccttaattcaacaatcaaatgatgatg---gaaaagaaaaatttgttatgcacgaccttgtcaatgatttagccttagtggtgt |
13333786 |
T |
|
| Q |
163 |
caggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagtt |
259 |
Q |
| |
|
|||||| |||||| | |||| |||||| |||||||||| ||||||||| | || ||||| |||||||| ||| || || ||| ||||| |||||| |
|
|
| T |
13333787 |
caggaacaagttgcttcaggcttgaatttggtggtaacatgtctaaaaatgttcgtcatttttcatataatcaaggagattacgactttttcaagaagtt |
13333886 |
T |
|
| Q |
260 |
gaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
|| | ||||| ||||||| |||||| ||||||| ||||||||| |
|
|
| T |
13333887 |
tgaggttctctacgatttcaagtgcttgcgaagctttctacccatt |
13333932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 305
Target Start/End: Original strand, 13396275 - 13396520
Alignment:
| Q |
63 |
gaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatat |
162 |
Q |
| |
|
|||||||| || ||||| |||||| ||| ||||||||||||| | | |||||||| ||| |||||||| |||| ||||| |||||||| | || |
|
|
| T |
13396275 |
gaattgttgtcaagatccttaattgaacgatcaaatgatgatattgttaaagaaaagtttgttatgcatgatgttgtctatgatctagcaacaattgcat |
13396374 |
T |
|
| Q |
163 |
caggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagtt |
259 |
Q |
| |
|
| || ||||||||||||||||||| || |||||| || ||| || || | | |||| | |||| |||||| |||||||||||| ||||| ||||| |
|
|
| T |
13396375 |
ctgggaaaagttgttgcaggtttggatctggtggtagaatctctgaagatgttcaccatgttacatacaaccaagaggagtatgacattttcaataagtt |
13396474 |
T |
|
| Q |
260 |
gaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
||| |||| | |||||||||||||| |||| |||||||||||| |
|
|
| T |
13396475 |
tgagacattcttcgatttcaaatgcttgcgaagtttcctacccatt |
13396520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 460
Target Start/End: Original strand, 8862353 - 8862457
Alignment:
| Q |
356 |
ggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatttg |
455 |
Q |
| |
|
||||||||||||||||||||| | | | |||||||||||||||||| |||| || |||| ||||||||| | ||| |||||||| || ||| |||| |
|
|
| T |
8862353 |
ggtggttgatgatttgctacccacatttggaaggttgcgtgtgttatcattatcaaaatatagaaacatcacaatgcttccagattcgatctgcagtttg |
8862452 |
T |
|
| Q |
456 |
gtgca |
460 |
Q |
| |
|
||||| |
|
|
| T |
8862453 |
gtgca |
8862457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 460
Target Start/End: Complemental strand, 11159021 - 11158915
Alignment:
| Q |
354 |
aaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatt |
453 |
Q |
| |
|
||||||||||||||||||||||| | | | ||||||||||||||| ||| |||| | ||||| |||||||| ||||| ||||||||||| | || |
|
|
| T |
11159021 |
aaggtggttgatgatttgctacccacatttggaaggttgcgtgtgttgtcgttatcaagatatactaacatcactgtactacctgattcaattggaagtt |
11158922 |
T |
|
| Q |
454 |
tggtgca |
460 |
Q |
| |
|
||||||| |
|
|
| T |
11158921 |
tggtgca |
11158915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 14 - 460
Target Start/End: Complemental strand, 44957021 - 44956575
Alignment:
| Q |
14 |
ttctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtgga |
113 |
Q |
| |
|
||||||||| |||||| |||||||||||||| | |||||| ||||| ||||||||||||||||| ||||||||||||| || ||||||| || |||| |
|
|
| T |
44957021 |
ttctcaaggtgaaaaagtggcggaggaagttgtttatgattgttttgctgaattgttatctagatccttaattcaacaattaagtgatgatactcatgga |
44956922 |
T |
|
| Q |
114 |
gaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatcc |
213 |
Q |
| |
|
||||||| |||||||||||||||||| || |||||||| |||||||||||||||||| |||||| ||| ||||||||||| |||| ||| ||||| | | |
|
|
| T |
44956921 |
gaaaagtttgtcatgcatgaccttgtcaacgatttagctacattcatatcaggaaaatgttgttctaggcttgaatgtggtcacatctctgaaaatgttc |
44956822 |
T |
|
| Q |
214 |
gccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttacatcgg |
313 |
Q |
| |
|
|||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||| | | |
|
|
| T |
44956821 |
gccatttgtcatataaccaagaagagtatgacattttcatgaagtttaagaatttctacaatttcaaatccttgcgaagcttcttacccatttactttcg |
44956722 |
T |
|
| Q |
314 |
acccatttacttatggtgggcccaaaatcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaag |
413 |
Q |
| |
|
||||| |||||||||| | || |||| |||||||| | |||||||||||||||||| |||| | ||||||||||||||| ||||||| ||||| |
|
|
| T |
44956721 |
acccacttacttatggagagcagaaaactacttatccctcaaggtggttgatgatttgatacccacactcaaaaggttgcgcatgttatcactatcagct |
44956622 |
T |
|
| Q |
414 |
tatacaaacatcaccaagctaccagattcaattggcaatttggtgca |
460 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
44956621 |
tatagaaacatcaccaaactaccagattcaattggaaatttggtgca |
44956575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 9 - 305
Target Start/End: Original strand, 11485770 - 11486066
Alignment:
| Q |
9 |
gattattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgctt |
108 |
Q |
| |
|
||||||| ||| ||| ||||| || ||||||| | || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485770 |
gattattgtcatggccaaaaagtggtggaggaattcggcgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctc |
11485869 |
T |
|
| Q |
109 |
gtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaa |
208 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
11485870 |
atggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattcatatcaggaaaaagttgttgcagacttgaatgtggtaacatctctaaaaa |
11485969 |
T |
|
| Q |
209 |
tatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
||| || |||||||||||||| ||| | | | ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11485970 |
tattcgtcatttgtcatataatcaagaagtgcgtgacattttcatgaagtttaagaatttctacaatttcaaatgcttgcgaagcttcctacccatt |
11486066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 341 - 474
Target Start/End: Original strand, 11486087 - 11486220
Alignment:
| Q |
341 |
tcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagat |
440 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
11486087 |
tcacttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagat |
11486186 |
T |
|
| Q |
441 |
tcaattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
||||||||||||||||||||| || | ||||||| |
|
|
| T |
11486187 |
tcaattggcaatttggtgcaattgcgatatctag |
11486220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 12 - 461
Target Start/End: Complemental strand, 17852257 - 17851823
Alignment:
| Q |
12 |
tattctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtg |
111 |
Q |
| |
|
||||||||||| | |||| | || |||||||| ||||| || | |||| ||||||||||| ||||| |||||||||||| ||||||||||| || || |
|
|
| T |
17852257 |
tattctcaagggggaaaagcagcagaggaagtgggtgacgactgtttttctgaattgttatccagatccttaattcaacaaacaaatgatgattctcatg |
17852158 |
T |
|
| Q |
112 |
gagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatat |
211 |
Q |
| |
|
|||||| | ||||||| | |||||| | || ||||| ||| || |||| |||||||||||||||||||||||||||||| |||| ||| ||||||| |
|
|
| T |
17852157 |
agaaaaagtttttcatgcacggccttgtctacgacttagctacagtcgtatctggaaaaagttgttgcaggtttgaatgtggtgacatctctgaaaatat |
17852058 |
T |
|
| Q |
212 |
ccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttacatc |
311 |
Q |
| |
|
||| ||||||||||| || ||| |||||||| | ||||||||||| |||||||| |||||||||||| || || |||||||||| || |||||| || |
|
|
| T |
17852057 |
ccgtcatttgtcatacaatcaaggagagtatgatatcttcatgaagtttaagaatttatacaatttcaaacgcctgcgaagcttccttcctatttacttc |
17851958 |
T |
|
| Q |
312 |
ggacccatttacttatggtgggcccaaaatcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatcca |
411 |
Q |
| |
|
| | ||| |||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
17851957 |
tcaac---------------ggcaggaaattacttatccatcaaggtggttgatgatttcctaccaaagctcaaaaggttgcgtgtgttatcgctatcaa |
17851873 |
T |
|
| Q |
412 |
agtatacaaacatcaccaagctaccagattcaattggcaatttggtgcaa |
461 |
Q |
| |
|
| |||| ||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
17851872 |
attataaaaacatcaccaagctaccagattcagttgccaatttggtgcaa |
17851823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 45 - 308
Target Start/End: Original strand, 26907665 - 26907925
Alignment:
| Q |
45 |
ggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatg |
144 |
Q |
| |
|
|||||||||| |||| |||||| |||| ||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||| |
|
|
| T |
26907665 |
ggtgatgatttctttgctgaattgctatccagatccttaattcaacaatcaaatgatgatgctcgtggggaaaagtttgtcatgcatgaccttgtcaatg |
26907764 |
T |
|
| Q |
145 |
atttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatga |
244 |
Q |
| |
|
||||||| ||| || |||| |||||||||||||||||||||||||||||| ||| || |||| | || ||| | |||||||| ||| | |||||||| |
|
|
| T |
26907765 |
atttagctacaatcgtatctggaaaaagttgttgcaggtttgaatgtggtgaca---ctgaaaaggttcgtcatgtttcatataatcaagaagagtatga |
26907861 |
T |
|
| Q |
245 |
caatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttac |
308 |
Q |
| |
|
| |||||| |||||| ||| |||||||| ||||||||||||| ||||||||||||||| |||| |
|
|
| T |
26907862 |
ccatttcacgaagtttaagcctttctacagtttcaaatgcttgcgaagcttcctacccacttac |
26907925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 26907960 - 26908069
Alignment:
| Q |
361 |
ttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtgca |
460 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||||||||| |||| || |||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
26907960 |
ttgatgatttgataccaacactcaaaaggttgcgtgtgttatcactattaaattatacaaacatcacaaagctaccagattcaattggtaatttggtgca |
26908059 |
T |
|
| Q |
461 |
aatgaggtat |
470 |
Q |
| |
|
| || ||||| |
|
|
| T |
26908060 |
attgcggtat |
26908069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 35 - 459
Target Start/End: Complemental strand, 57722 - 57310
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||||||| ||||||||||||||||||| || ||||||| | |||| ||||| | ||||||||||||| |
|
|
| T |
57722 |
ggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgac |
57623 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||| | ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| | ||||| | || || || |||||||||||| |
|
|
| T |
57622 |
cttttcaatgatttagctacattcgtatcaggaaaaagttgttgcaggcttgaatgtggtgacatccttgaaaatgttcgtcacttctcatataaccaag |
57523 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttacatcggacccatttacttatggtgggc |
334 |
Q |
| |
|
|| | ||||||| |||||||||||| |||| || ||||||| ||||| ||| ||||||||||| |||| | | ||| || |||||| |
|
|
| T |
57522 |
agtactatgacattttcatgaagtttgagaaattacacaattttaaatgtttgcgaagcttcctatgtatttgctt--gac-----gac--gtggtgg-- |
57434 |
T |
|
| Q |
335 |
ccaaaatcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagcta |
434 |
Q |
| |
|
|| ||| |||||||| | |||||| ||||||| || ||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
57433 |
-cacaattacttatccttcaaggtgattgatgactttctaccgtcacaaaaaaggttgcgtgtgttatcgctatcagggtataaaaacatcaccaagcta |
57335 |
T |
|
| Q |
435 |
ccagattcaattggcaatttggtgc |
459 |
Q |
| |
|
|||||||||||||| |||||||||| |
|
|
| T |
57334 |
ccagattcaattgggaatttggtgc |
57310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 35 - 474
Target Start/End: Complemental strand, 56913 - 56486
Alignment:
| Q |
35 |
ggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgac |
134 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||||||| ||||||||||||||||||| || ||||||| | |||| ||||| | ||||||||||||| |
|
|
| T |
56913 |
ggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgac |
56814 |
T |
|
| Q |
135 |
cttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaatgtggtaacatttctaaaaatatccgccatttgtcatataaccaaa |
234 |
Q |
| |
|
||| | ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| | ||||| | || || || |||||||||||| |
|
|
| T |
56813 |
cttatcaatgatttagctacattcgtatcaggaaaaagttgttgcaggcttgaatgtggtgacatccttgaaaatgttcgtcacttctcatataaccaag |
56714 |
T |
|
| Q |
235 |
aggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatttacatcggacccatttacttatggtgggc |
334 |
Q |
| |
|
|| | ||||||| |||||||||||| |||| || ||||||| ||||| ||| ||||||||||| |||| | | ||| || |||||| |
|
|
| T |
56713 |
agtactatgacattttcatgaagtttgagaaattacacaattttaaatgtttgcgaagcttcctatgtatttgctt--gac-----gac--gtggtgg-- |
56625 |
T |
|
| Q |
335 |
ccaaaatcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagcta |
434 |
Q |
| |
|
|| ||| |||||||| | |||||| ||||||| || ||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
56624 |
-cacaattacttatccttcaaggtgattgatgactttctaccgtcacaaaaaaggttgcgtgtgttatcgctatcagggtataaaaacatcaccaagcta |
56526 |
T |
|
| Q |
435 |
ccagattcaattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
|||||||||||||| |||| |||||| || ||||||||| |
|
|
| T |
56525 |
ccagattcaattggaaattcggtgcagttgcggtatctag |
56486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 13 - 305
Target Start/End: Complemental strand, 31679066 - 31678771
Alignment:
| Q |
13 |
attctcaaggcgaaaaaacggcggaggaagttggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtgg |
112 |
Q |
| |
|
|||||||||| |||||| | |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| | |||||| | | | |
|
|
| T |
31679066 |
attctcaaggagaaaaagcaatggaggaagttggtgatgactactttgttgaattgttatctagatcgttaattcaacaatcgcacgatgattttggaag |
31678967 |
T |
|
| Q |
113 |
agaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaa---tgtggtaacatttctaaaaat |
209 |
Q |
| |
|
| | |||| | |||||||||| ||||| ||||||||||| ||| | |||| |||||||||||||||||| |||| |||| ||||| ||| ||||| |
|
|
| T |
31678966 |
acagaagtttctcatgcatgatcttgtcaatgatttagctacaattgtatctggaaaaagttgttgcaggcgtgaacatggtggcaacatctctgaaaat |
31678867 |
T |
|
| Q |
210 |
atccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
|||||||||| |||||||||||| | |||||||||| ||||| |||||| | | ||| || |||||||||||||| ||||||| || |||||| |
|
|
| T |
31678866 |
gtccgccatttttcatataaccaagaagagtatgacattttcaagaagtttgaaattttttatgatttcaaatgcttgcgaagctttcttcccatt |
31678771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 31678736 - 31678631
Alignment:
| Q |
355 |
aggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaattt |
454 |
Q |
| |
|
|||| ||||||||| || |||| | ||| | ||||||||||||||||||| |||| |||| ||||||| ||| |||||| ||||||||||||| ||| |
|
|
| T |
31678736 |
aggttgttgatgatgtgatacccacacttagaaggttgcgtgtgttatcgttatctggttatagaaacatcgccatgctaccggattcaattggcagttt |
31678637 |
T |
|
| Q |
455 |
ggtgca |
460 |
Q |
| |
|
|||||| |
|
|
| T |
31678636 |
ggtgca |
31678631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 29837426 - 29837541
Alignment:
| Q |
63 |
gaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatat |
162 |
Q |
| |
|
|||||| |||||||||| |||||||||||| || |||||||| || ||||||||| | |||||||||||||| | | | ||| ||||| ||||| ||| |
|
|
| T |
29837426 |
gaattgatatctagatccttaattcaacaagcatatgatgatactgatggagaaaaatttgtcatgcatgaccgtatcagtgacttagcggcattcgtat |
29837525 |
T |
|
| Q |
163 |
caggaaaaagttgttg |
178 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
29837526 |
caggaacaagttgttg |
29837541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 474
Target Start/End: Original strand, 29837742 - 29837825
Alignment:
| Q |
391 |
tgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtgcaaatgaggtatctag |
474 |
Q |
| |
|
||||||||||||||||||| ||||||| ||| ||||||||||||| |||||| ||| || |||| |||| |||||||||||| |
|
|
| T |
29837742 |
tgcgtgtgttatcgctatcaaagtatagaaatgtcaccaagctaccggattcacttgacactttgacgcaattgaggtatctag |
29837825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 305
Target Start/End: Original strand, 826747 - 826933
Alignment:
| Q |
122 |
tgtcatgcatgaccttgttaatgatttagcaacattcatatcaggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccat |
218 |
Q |
| |
|
|||| |||| |||||||| ||||| |||||||| | |||| || |||| |||||||| |||||||| |||||| || |||||| || | | |||| |
|
|
| T |
826747 |
tgtcttgcacgaccttgtctatgatctagcaacaattgtatccgggaaaaattgttgcaagtttgaatttggtggtagaatctctaaagatgttcaccat |
826846 |
T |
|
| Q |
219 |
ttgtcatataaccaaaaggagtatgacaatttcatgaagttgaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
|| ||||| || ||| |||||||||||| ||||| |||||| ||| |||||| |||||||| ||||| |||| |||||||||||| |
|
|
| T |
826847 |
ttttcatacaatcaagaggagtatgacattttcaagaagtttgagactttctatgatttcaaaagcttgcgaagtttcctacccatt |
826933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 460
Target Start/End: Original strand, 826999 - 827073
Alignment:
| Q |
386 |
aaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagattcaattggcaatttggtgca |
460 |
Q |
| |
|
||||||||||||| |||| |||| || |||| ||||||||| | ||| |||||||||||||| ||||||||||| |
|
|
| T |
826999 |
aaggttgcgtgtgctatccttatcaaattataaaaacatcactatgctgccagattcaattggtaatttggtgca |
827073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 305
Target Start/End: Complemental strand, 145222 - 144980
Alignment:
| Q |
63 |
gaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatat |
162 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||||||||| | |||||| | ||| ||||| |||||||| ||||||||||| | | | | |
|
|
| T |
145222 |
gaattgttatccaggtccttaattcaacaatcaaatgatgatg---gaaaagaaaaatttgttatgcacgaccttgtcaatgatttagccttagtggtgt |
145126 |
T |
|
| Q |
163 |
caggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagtt |
259 |
Q |
| |
|
|||||| |||||| | |||| |||||| |||||||||| ||||||||| | || ||||| |||||||| ||| || || ||| ||||| |||||| |
|
|
| T |
145125 |
caggaacaagttgcttcaggcttgaatttggtggtaacatgtctaaaaatgttcgtcatttttcatataatcaaggagattacgactttttcaagaagtt |
145026 |
T |
|
| Q |
260 |
gaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
|| | ||||| ||||||| |||||| ||||||| ||||||||| |
|
|
| T |
145025 |
tgaggttctctacgatttcaagtgcttgcgaagctttctacccatt |
144980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 305
Target Start/End: Complemental strand, 153527 - 153285
Alignment:
| Q |
63 |
gaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattcatat |
162 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||||||||| | |||||| | ||| ||||| |||||||| ||||||||||| | | | | |
|
|
| T |
153527 |
gaattgttatccaggtccttaattcaacaatcaaatgatgatg---gaaaagaaaaatttgttatgcacgaccttgtcaatgatttagccttagtggtgt |
153431 |
T |
|
| Q |
163 |
caggaaaaagttgttgcaggtttgaat---gtggtaacatttctaaaaatatccgccatttgtcatataaccaaaaggagtatgacaatttcatgaagtt |
259 |
Q |
| |
|
|||||| |||||| | |||| |||||| |||||||||| ||||||||| | || ||||| |||||||| ||| || || ||| ||||| |||||| |
|
|
| T |
153430 |
caggaacaagttgcttcaggcttgaatttggtggtaacatgtctaaaaatgttcgtcatttttcatataatcaaggagattacgactttttcaagaagtt |
153331 |
T |
|
| Q |
260 |
gaagaatttctacaatttcaaatgcttgagaagcttcctacccatt |
305 |
Q |
| |
|
|| | ||||| ||||||| |||||| ||||||| ||||||||| |
|
|
| T |
153330 |
tgaggttctctacgatttcaagtgcttgcgaagctttctacccatt |
153285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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