View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1758_low_26 (Length: 365)
Name: NF1758_low_26
Description: NF1758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1758_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 15 - 348
Target Start/End: Original strand, 41129798 - 41130128
Alignment:
| Q |
15 |
aacccaatctctactatccataaacaacaaccgattactggtaattacaagatatagatattagataatgtcaattttcaacatcagattattacttcaa |
114 |
Q |
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| T |
41129798 |
aacccaatatccactatccataaacaacaaccgattactggtaattacgagatatagatattagataatgtcaattttcaacatcagattattacttcaa |
41129897 |
T |
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| Q |
115 |
taagctaaagaagaattatacactattcgtactagcagattagatgtgaacattattttattttgaagggtactagatgtaaacttatcaccattcacta |
214 |
Q |
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| T |
41129898 |
taagctaaagaagagttatacactattcgtactag---attagatgtgaacattgttttattttgaagggtactagatgtaaagttatcaccattcacca |
41129994 |
T |
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| Q |
215 |
caaaatttacatgtgaatatatttggaatgtaaaagtcactcctaaattttcttcattacccgcaatttcaaggaggcaatgtactctccatcgtatctc |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
41129995 |
caaaatttacatgtgaatatatttggaatgtaaaagtcactcctaaattttcttcattacccgcaatttcaaggaggcactgtactctccatcgtatctc |
41130094 |
T |
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| Q |
315 |
accattccagtactccagagattgattaacccct |
348 |
Q |
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| T |
41130095 |
accattccagtactccagagattgattaacccct |
41130128 |
T |
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