View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1758_low_52 (Length: 223)
Name: NF1758_low_52
Description: NF1758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1758_low_52 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 38440397 - 38440588
Alignment:
| Q |
16 |
actaattcagaaaaaccatcagggggaaatttccgtgctgacatttttgatgttatgaagcaaatagtgaagtttcttgatgaaaataactcaccatttt |
115 |
Q |
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| T |
38440397 |
actaattcagaaaaaccatcagggggaaatttccgtgctgacatttttgatgttatgaagcaaatagtgaagtttcttgatgaaaataactcaccatttt |
38440496 |
T |
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| Q |
116 |
tagtgaacatataccctttcctaagtctataccaaaatgatgatttccctgaagattatgcatttttcgacagttcaagtagaacaattagt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38440497 |
tagtgaacatataccctttcctaagtctataccaaaatgatgatttccctgaagattatgcatttttcgacagttcaagtagaacaattagt |
38440588 |
T |
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