View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17590_low_12 (Length: 249)
Name: NF17590_low_12
Description: NF17590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17590_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 24914062 - 24914297
Alignment:
| Q |
13 |
aatatagatataagattgaaaaccagtaatagaacattgattatgacataacaaaggagattatttttatgtacaataggtttaacaaaatcagttcaga |
112 |
Q |
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| T |
24914062 |
aatatagatataagattgaaaaccagtaatagaacattgattatgacataacaaaggagattattttcatgtacaataggtttaactaaatcagttcaga |
24914161 |
T |
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| Q |
113 |
tcaaaaacagcaagatttacctttgttgaattaaaagtctcaatagaagcaagatttccatcgatgaaactcaagagatgtttgttatgctccaataggg |
212 |
Q |
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|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| | |
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| T |
24914162 |
tcaaaa-cagcaagatttaccttcgttgaattaaaagtctcaatagaagcaagatttccatcgattaaacttaagagctgtttgttgtgctccaatagtg |
24914260 |
T |
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| Q |
213 |
cctttgcggcctctaaaattgctgccaaaagcaaaat |
249 |
Q |
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| T |
24914261 |
cctttgcggcctctaaaattgctgccaaaagcaaaat |
24914297 |
T |
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