View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17594_high_16 (Length: 323)

Name: NF17594_high_16
Description: NF17594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17594_high_16
NF17594_high_16
[»] chr6 (16 HSPs)
chr6 (285-323)||(2965739-2965777)
chr6 (285-323)||(2255530-2255568)
chr6 (285-323)||(25948795-25948833)
chr6 (285-323)||(2039377-2039415)
chr6 (285-323)||(2965652-2965690)
chr6 (285-323)||(4407948-4407986)
chr6 (285-323)||(9964520-9964558)
chr6 (285-323)||(10738922-10738960)
chr6 (285-323)||(16127275-16127313)
chr6 (285-323)||(18771920-18771958)
chr6 (285-323)||(19591380-19591418)
chr6 (285-323)||(21383889-21383927)
chr6 (285-319)||(22043682-22043716)
chr6 (285-319)||(32276170-32276204)
chr6 (285-322)||(28038975-28039012)
chr6 (285-321)||(34101160-34101196)
[»] chr8 (19 HSPs)
chr8 (285-321)||(5385696-5385732)
chr8 (285-323)||(2672143-2672181)
chr8 (285-323)||(16669336-16669374)
chr8 (285-323)||(17159277-17159315)
chr8 (285-323)||(28898906-28898944)
chr8 (285-321)||(9500925-9500961)
chr8 (285-321)||(11296581-11296617)
chr8 (285-323)||(116785-116823)
chr8 (285-323)||(5385609-5385647)
chr8 (285-323)||(17159191-17159229)
chr8 (285-323)||(23352167-23352205)
chr8 (293-323)||(28004720-28004750)
chr8 (293-323)||(28062022-28062052)
chr8 (285-323)||(36574484-36574522)
chr8 (285-323)||(43681382-43681420)
chr8 (285-322)||(12610845-12610882)
chr8 (285-321)||(17749943-17749979)
chr8 (285-321)||(21590006-21590042)
chr8 (285-317)||(31957387-31957419)
[»] chr4 (18 HSPs)
chr4 (285-321)||(27487675-27487711)
chr4 (285-323)||(15323509-15323547)
chr4 (285-323)||(17697322-17697360)
chr4 (285-323)||(6810637-6810675)
chr4 (285-323)||(8401285-8401323)
chr4 (285-323)||(8401372-8401410)
chr4 (285-323)||(9150802-9150840)
chr4 (285-323)||(11347297-11347335)
chr4 (285-323)||(18909726-18909764)
chr4 (285-323)||(19203668-19203706)
chr4 (285-323)||(19203755-19203793)
chr4 (285-319)||(19495495-19495529)
chr4 (285-323)||(19495578-19495616)
chr4 (285-319)||(20570068-20570102)
chr4 (285-323)||(28755252-28755290)
chr4 (285-323)||(36498287-36498325)
chr4 (285-323)||(54442064-54442102)
chr4 (291-323)||(6810550-6810582)
[»] chr2 (27 HSPs)
chr2 (284-323)||(43209255-43209294)
chr2 (285-319)||(1320770-1320804)
chr2 (285-323)||(1591908-1591946)
chr2 (285-323)||(12883249-12883287)
chr2 (285-323)||(22265303-22265341)
chr2 (285-323)||(22422928-22422966)
chr2 (285-323)||(39257298-39257336)
chr2 (285-322)||(34963520-34963557)
chr2 (285-323)||(5513563-5513601)
chr2 (285-323)||(5513650-5513688)
chr2 (285-323)||(7511514-7511552)
chr2 (285-323)||(7515798-7515836)
chr2 (285-323)||(18817355-18817393)
chr2 (285-323)||(18966760-18966798)
chr2 (285-323)||(20100926-20100964)
chr2 (285-323)||(20962124-20962162)
chr2 (285-323)||(25890714-25890752)
chr2 (285-323)||(27927100-27927138)
chr2 (285-319)||(28192381-28192415)
chr2 (285-323)||(28192464-28192502)
chr2 (285-323)||(39257210-39257248)
chr2 (285-323)||(39615663-39615701)
chr2 (285-323)||(39615750-39615788)
chr2 (285-319)||(44354069-44354103)
chr2 (285-322)||(20513750-20513787)
chr2 (285-321)||(1320685-1320721)
chr2 (285-321)||(3329012-3329048)
[»] scaffold0740 (1 HSPs)
scaffold0740 (285-323)||(3060-3098)
[»] scaffold0090 (2 HSPs)
scaffold0090 (285-323)||(15446-15484)
scaffold0090 (285-323)||(15533-15571)
[»] scaffold0035 (1 HSPs)
scaffold0035 (285-323)||(72346-72384)
[»] chr7 (22 HSPs)
chr7 (285-323)||(7881583-7881621)
chr7 (285-323)||(38415977-38416015)
chr7 (285-323)||(39868636-39868674)
chr7 (285-323)||(43742146-43742184)
chr7 (291-323)||(47668297-47668329)
chr7 (285-323)||(4098153-4098191)
chr7 (285-323)||(11666836-11666874)
chr7 (285-323)||(12180010-12180048)
chr7 (285-323)||(12180097-12180135)
chr7 (285-323)||(15984348-15984386)
chr7 (285-323)||(17358171-17358209)
chr7 (285-323)||(22947447-22947485)
chr7 (285-323)||(22947534-22947572)
chr7 (285-323)||(30441350-30441388)
chr7 (285-323)||(31079277-31079315)
chr7 (285-323)||(35077796-35077834)
chr7 (285-323)||(37391260-37391298)
chr7 (285-322)||(37446633-37446670)
chr7 (285-321)||(30538304-30538340)
chr7 (285-321)||(31298630-31298666)
chr7 (285-321)||(37101478-37101514)
chr7 (291-323)||(39459517-39459549)
[»] chr5 (23 HSPs)
chr5 (285-323)||(5081642-5081680)
chr5 (285-323)||(10690874-10690912)
chr5 (285-323)||(12369631-12369669)
chr5 (285-323)||(18618338-18618376)
chr5 (285-323)||(20352713-20352751)
chr5 (285-323)||(21000521-21000559)
chr5 (285-323)||(21262771-21262809)
chr5 (285-323)||(27830035-27830073)
chr5 (285-323)||(34974169-34974207)
chr5 (285-323)||(40616364-40616402)
chr5 (285-323)||(2841765-2841803)
chr5 (285-323)||(11762328-11762366)
chr5 (285-323)||(13892732-13892770)
chr5 (285-323)||(13952625-13952663)
chr5 (285-323)||(14946484-14946522)
chr5 (285-323)||(18805243-18805281)
chr5 (285-323)||(20884201-20884239)
chr5 (285-323)||(27451376-27451414)
chr5 (285-323)||(29989544-29989582)
chr5 (285-323)||(29989633-29989671)
chr5 (285-323)||(39886593-39886631)
chr5 (285-321)||(16867927-16867963)
chr5 (285-321)||(25881114-25881150)
[»] chr3 (30 HSPs)
chr3 (285-323)||(5047247-5047285)
chr3 (285-323)||(7731350-7731388)
chr3 (285-323)||(7731436-7731474)
chr3 (285-323)||(8764066-8764104)
chr3 (285-323)||(12998778-12998816)
chr3 (285-323)||(39825524-39825562)
chr3 (285-323)||(40004042-40004080)
chr3 (285-323)||(54014637-54014675)
chr3 (285-322)||(40003956-40003993)
chr3 (285-321)||(33312502-33312538)
chr3 (285-323)||(3526619-3526657)
chr3 (285-323)||(7014809-7014847)
chr3 (285-323)||(7862565-7862603)
chr3 (285-323)||(9268740-9268778)
chr3 (285-323)||(11915008-11915046)
chr3 (285-323)||(16343716-16343754)
chr3 (285-323)||(16871341-16871379)
chr3 (285-323)||(18546454-18546492)
chr3 (285-323)||(21015320-21015358)
chr3 (285-323)||(21015407-21015445)
chr3 (285-323)||(21802292-21802330)
chr3 (285-323)||(25025003-25025041)
chr3 (285-323)||(37585802-37585840)
chr3 (285-323)||(39937096-39937134)
chr3 (285-323)||(39937184-39937222)
chr3 (285-323)||(52866127-52866165)
chr3 (285-323)||(54014723-54014761)
chr3 (285-323)||(55120783-55120821)
chr3 (285-321)||(26996187-26996223)
chr3 (285-321)||(30751344-30751380)
[»] chr1 (20 HSPs)
chr1 (285-323)||(6954047-6954085)
chr1 (285-323)||(12163330-12163368)
chr1 (285-323)||(15734728-15734766)
chr1 (285-323)||(16985270-16985308)
chr1 (285-323)||(24169274-24169312)
chr1 (285-323)||(27270417-27270455)
chr1 (285-321)||(15734641-15734677)
chr1 (285-323)||(9403488-9403526)
chr1 (285-323)||(9631822-9631860)
chr1 (285-323)||(15541509-15541547)
chr1 (285-323)||(16985357-16985395)
chr1 (285-323)||(22374642-22374680)
chr1 (285-323)||(38601250-38601288)
chr1 (285-323)||(39935011-39935049)
chr1 (285-323)||(39935098-39935136)
chr1 (285-323)||(40633168-40633206)
chr1 (285-322)||(9631736-9631773)
chr1 (285-322)||(23284846-23284883)
chr1 (285-321)||(1613760-1613796)
chr1 (285-321)||(1819250-1819286)
[»] scaffold0744 (1 HSPs)
scaffold0744 (285-323)||(1383-1421)
[»] scaffold0734 (1 HSPs)
scaffold0734 (285-323)||(3051-3089)
[»] scaffold0599 (1 HSPs)
scaffold0599 (285-323)||(6759-6797)
[»] scaffold0352 (1 HSPs)
scaffold0352 (285-323)||(9744-9782)
[»] scaffold0235 (2 HSPs)
scaffold0235 (285-323)||(12656-12694)
scaffold0235 (285-323)||(24358-24396)
[»] scaffold0199 (2 HSPs)
scaffold0199 (285-323)||(11922-11960)
scaffold0199 (285-323)||(12008-12046)
[»] scaffold0049 (2 HSPs)
scaffold0049 (285-323)||(62252-62290)
scaffold0049 (287-323)||(57470-57506)
[»] scaffold0148 (1 HSPs)
scaffold0148 (284-316)||(24514-24546)


Alignment Details
Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 2965739 - 2965777
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2965739 tattaggggtgtttttcggaaaataaaaattttacgagg 2965777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 2255530 - 2255568
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2255530 tattaggggtgttttccggaaaataaaaattttacgagg 2255568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 25948795 - 25948833
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  25948795 tattaggggtgttttccggaaaataaaaattttacgagg 25948833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 2039415 - 2039377
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  2039415 tattaagggtgttttccggaaaataaaaattttacgagg 2039377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 2965690 - 2965652
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  2965690 tattaagggtgttttccggaaaataaaaattttacgagg 2965652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 4407986 - 4407948
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  4407986 tattaagggtgttttccggaaaataaaaattttacgagg 4407948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 9964520 - 9964558
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  9964520 tattaggggtgttttccagaaaataaaaattttacgagg 9964558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 10738922 - 10738960
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  10738922 tattaggggtgtttttcggaaaaaaataattttacgagg 10738960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 16127275 - 16127313
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  16127275 tattaggggtgttttctggaaaataaaaattttacgagg 16127313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 18771958 - 18771920
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  18771958 tattaggggtgttttctggaaaataaaaattttacgagg 18771920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 19591418 - 19591380
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  19591418 tattaggggtgttttccggaaaataaaaattttatgagg 19591380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 21383889 - 21383927
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  21383889 tattaagggtgttttccggaaaataaaaattttacgagg 21383927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 22043682 - 22043716
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttac 319  Q
    ||||||||||||||| |||||||||||||||||||    
T  22043682 tattaggggtgttttccggaaaataaaaattttac 22043716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 32276204 - 32276170
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttac 319  Q
    |||||||||||||||||||||||||||| ||||||    
T  32276204 tattaggggtgtttttcggaaaataaaatttttac 32276170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 28039012 - 28038975
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgag 322  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  28039012 tattaagggtgtttttcgaaaaataaaaattttacgag 28038975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 34101160 - 34101196
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  34101160 tattaagggtgtttttcggaaaataaaatttttacga 34101196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 5385696 - 5385732
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    |||||||||||||||||||||||||||||||||||||    
T  5385696 tattaggggtgtttttcggaaaataaaaattttacga 5385732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 2672143 - 2672181
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2672143 tattaggggtgttttccggaaaataaaaattttacgagg 2672181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 16669374 - 16669336
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  16669374 tattaggggtgttttccggaaaataaaaattttacgagg 16669336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 17159277 - 17159315
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  17159277 tattaagggtgtttttcggaaaataaaaattttacgagg 17159315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 28898906 - 28898944
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  28898906 tattaagggtgtttttcggaaaataaaaattttacgagg 28898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 9500925 - 9500961
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9500925 tattaagggtgtttttcggaaaataaaaattttacga 9500961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 11296617 - 11296581
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    |||||||||||||||| ||||||||||||||||||||    
T  11296617 tattaggggtgttttttggaaaataaaaattttacga 11296581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 116785 - 116823
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  116785 tattaggggtgttttctggaaaataaaaattttacgagg 116823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 5385647 - 5385609
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  5385647 tattaagggtgttttccggaaaataaaaattttacgagg 5385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 17159229 - 17159191
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  17159229 tattagggttgtttttcggaaaataaaatttttacgagg 17159191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 23352167 - 23352205
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  23352167 tattaagggtgttttccggaaaataaaaattttacgagg 23352205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 323
Target Start/End: Complemental strand, 28004750 - 28004720
Alignment:
Q  293 gtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||||||||||||||||    
T  28004750 gtgtttttcggaaaataaaaattttacgagg 28004720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 323
Target Start/End: Complemental strand, 28062052 - 28062022
Alignment:
Q  293 gtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||||||||||||||||    
T  28062052 gtgtttttcggaaaataaaaattttacgagg 28062022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 36574522 - 36574484
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  36574522 tattatgggtgttttccggaaaataaaaattttacgagg 36574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 43681382 - 43681420
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  43681382 tattaagggtgttttccggaaaataaaaattttacgagg 43681420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 12610845 - 12610882
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgag 322  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  12610845 tattaggggtgtttttcggaaaaaaaatattttacgag 12610882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 17749979 - 17749943
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  17749979 tattaagggtgtttttcggaaaataaaatttttacga 17749943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 21590006 - 21590042
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  21590006 tattaggggtgttttccggaaaataaaatttttacga 21590042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 31957419 - 31957387
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaatttt 317  Q
    ||||| |||||||||||||||||||||||||||    
T  31957419 tattaagggtgtttttcggaaaataaaaatttt 31957387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 27487675 - 27487711
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    |||||||||||||||||||||||||||||||||||||    
T  27487675 tattaggggtgtttttcggaaaataaaaattttacga 27487711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 15323547 - 15323509
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  15323547 tattaggggtgttttccggaaaataaaaattttacgagg 15323509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 17697322 - 17697360
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  17697322 tattaggggtgttttccggaaaataaaaattttacgagg 17697360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 6810637 - 6810675
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  6810637 tattaagggtgtttttcggaaaataaaatttttacgagg 6810675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 8401323 - 8401285
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  8401323 tattaggagtgttttccggaaaataaaaattttacgagg 8401285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 8401372 - 8401410
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  8401372 tattaagggtgttttccggaaaataaaaattttacgagg 8401410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 9150840 - 9150802
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  9150840 tattaggggtgttttgtggaaaataaaaattttacgagg 9150802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 11347335 - 11347297
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  11347335 tattaggggtgttttccgaaaaataaaaattttacgagg 11347297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 18909726 - 18909764
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  18909726 tattagcggtgtttttcagaaaataaaaattttacgagg 18909764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 19203706 - 19203668
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  19203706 tattaagggtgttttccggaaaataaaaattttacgagg 19203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 19203755 - 19203793
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  19203755 tattagggatgtttttcggaaaataaaatttttacgagg 19203793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 19495529 - 19495495
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttac 319  Q
    ||||||||||||||| |||||||||||||||||||    
T  19495529 tattaggggtgttttccggaaaataaaaattttac 19495495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 19495578 - 19495616
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  19495578 tattaagggtgttttccggaaaataaaaattttacgagg 19495616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 20570068 - 20570102
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttac 319  Q
    ||||||||||||||| |||||||||||||||||||    
T  20570068 tattaggggtgttttccggaaaataaaaattttac 20570102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 28755252 - 28755290
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  28755252 tattaagggtgttttccggaaaataaaaattttacgagg 28755290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 36498325 - 36498287
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  36498325 tattaggggtgttttccggaaaataaaatttttacgagg 36498287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 54442102 - 54442064
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  54442102 tattaggggtgttttccagaaaataaaaattttacgagg 54442064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 323
Target Start/End: Complemental strand, 6810582 - 6810550
Alignment:
Q  291 gggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||| |||||||||||||||||||||||    
T  6810582 gggtgttttccggaaaataaaaattttacgagg 6810550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 43209294 - 43209255
Alignment:
Q  284 atattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  43209294 atattaggggtgttttttggaaaataaaaattttacgagg 43209255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 1320770 - 1320804
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttac 319  Q
    |||||||||||||||||||||||||||||||||||    
T  1320770 tattaggggtgtttttcggaaaataaaaattttac 1320804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 1591946 - 1591908
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  1591946 tattaagggtgtttttcggaaaataaaaattttacgagg 1591908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 12883249 - 12883287
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12883249 tattaggggtgttttccggaaaataaaaattttacgagg 12883287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 22265303 - 22265341
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  22265303 tattaagggtgtttttcggaaaataaaaattttacgagg 22265341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 22422928 - 22422966
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  22422928 tattaggggtgtttttcggaaaataaaaattttatgagg 22422966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 39257298 - 39257336
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39257298 tattaggggtgttttccggaaaataaaaattttacgagg 39257336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 34963520 - 34963557
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgag 322  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34963520 tattaagggtgtttttcggaaaataaaaattttacgag 34963557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 5513601 - 5513563
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  5513601 tattaagggtgtttttcggaaaataaaatttttacgagg 5513563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 5513650 - 5513688
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  5513650 tattaggggtgttttctggaaaataaaaattttacgagg 5513688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 7511514 - 7511552
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  7511514 tattaagggtgttttccggaaaataaaaattttacgagg 7511552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 7515798 - 7515836
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  7515798 tattaagggtgttttccggaaaataaaaattttacgagg 7515836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 18817355 - 18817393
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  18817355 tattaagggtgttttccggaaaataaaaattttacgagg 18817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 18966798 - 18966760
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  18966798 tattaggggtgttttctggaaaataaaaattttacgagg 18966760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 20100926 - 20100964
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  20100926 tattaagggtgttttccggaaaataaaaattttacgagg 20100964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 20962162 - 20962124
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  20962162 tattaagggtgttttccggaaaataaaaattttacgagg 20962124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 25890714 - 25890752
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  25890714 tattaggggtgttttccggaaaataaaatttttacgagg 25890752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 27927100 - 27927138
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  27927100 tattagaggtgttttccggaaaataaaaattttacgagg 27927138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 28192415 - 28192381
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttac 319  Q
    ||||||||||||||| |||||||||||||||||||    
T  28192415 tattaggggtgttttccggaaaataaaaattttac 28192381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 28192464 - 28192502
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  28192464 tattaagggtgttttccggaaaataaaaattttacgagg 28192502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 39257248 - 39257210
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  39257248 tattaagggtgttttccggaaaataaaaattttacgagg 39257210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 39615701 - 39615663
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  39615701 tattaggggtgttttctggaaaataaaaattttacgagg 39615663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 39615750 - 39615788
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  39615750 tattaagggtgtttttcgaaaaataaaaattttacgagg 39615788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 44354069 - 44354103
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttac 319  Q
    ||||||||||||||| |||||||||||||||||||    
T  44354069 tattaggggtgttttccggaaaataaaaattttac 44354103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 20513787 - 20513750
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgag 322  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  20513787 tattaagggtgttttccggaaaataaaaattttacgag 20513750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 1320721 - 1320685
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  1320721 tattaagggtgtttttcgaaaaataaaaattttacga 1320685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 3329048 - 3329012
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||||||||||||| | |||||||||||||||||||    
T  3329048 tattaggggtgttttccagaaaataaaaattttacga 3329012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 3060 - 3098
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  3060 tattaggggtgttttccggaaaataaaaattttacgagg 3098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 15484 - 15446
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15484 tattaagggtgtttttcggaaaataaaaattttacgagg 15446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 15533 - 15571
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  15533 tattaggggtgttttccggaaaataaaaattttatgagg 15571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 72346 - 72384
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  72346 tattaggggtgtttttcggaaaataaaatttttacgagg 72384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 7881583 - 7881621
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  7881583 tattaggggtgttttccggaaaataaaaattttacgagg 7881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 38416015 - 38415977
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  38416015 tattaggggtgttttccggaaaataaaaattttacgagg 38415977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 39868636 - 39868674
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39868636 tattaggggtgttttccggaaaataaaaattttacgagg 39868674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 43742146 - 43742184
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  43742146 tattaggggtgttttccggaaaataaaaattttacgagg 43742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 323
Target Start/End: Original strand, 47668297 - 47668329
Alignment:
Q  291 gggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||||||||||||||||||    
T  47668297 gggtgtttttcggaaaataaaaattttacgagg 47668329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 4098191 - 4098153
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  4098191 tattaagggtgttttccggaaaataaaaattttacgagg 4098153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 11666874 - 11666836
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  11666874 tattaggggtgttttccagaaaataaaaattttacgagg 11666836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 12180048 - 12180010
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  12180048 tattaagggtgttttccggaaaataaaaattttacgagg 12180010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 12180097 - 12180135
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  12180097 tattaggggtattttccggaaaataaaaattttacgagg 12180135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 15984348 - 15984386
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  15984348 tattaagggtgttttccggaaaataaaaattttacgagg 15984386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 17358171 - 17358209
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  17358171 tattaagggtgttttccggaaaataaaaattttacgagg 17358209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 22947485 - 22947447
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  22947485 tattaggggtgttttcctgaaaataaaaattttacgagg 22947447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 22947534 - 22947572
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  22947534 tattaagggtgttttccggaaaataaaaattttacgagg 22947572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 30441350 - 30441388
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  30441350 tattagggatgttttccggaaaataaaaattttacgagg 30441388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 31079277 - 31079315
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  31079277 tattaggggtgttttccggaaaataaaatttttacgagg 31079315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 35077796 - 35077834
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  35077796 tattaagggtgtttttcgaaaaataaaaattttacgagg 35077834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 37391298 - 37391260
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  37391298 tattaggggtgttttccgaaaaataaaaattttacgagg 37391260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 37446633 - 37446670
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgag 322  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  37446633 tattaagggtgttttccggaaaataaaaattttacgag 37446670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 30538304 - 30538340
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||||||||||||| || ||||||||||||||||||    
T  30538304 tattaggggtgttttccgaaaaataaaaattttacga 30538340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 31298666 - 31298630
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  31298666 tattaagggtatttttcggaaaataaaaattttacga 31298630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 37101478 - 37101514
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||||||||||||||  |||||||||||||||||||    
T  37101478 tattaggggtgttttttagaaaataaaaattttacga 37101514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 323
Target Start/End: Original strand, 39459517 - 39459549
Alignment:
Q  291 gggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||| |||||||||||||||||||||||    
T  39459517 gggtgttttccggaaaataaaaattttacgagg 39459549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 5081642 - 5081680
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5081642 tattaggggtgttttccggaaaataaaaattttacgagg 5081680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 10690912 - 10690874
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  10690912 tattaggggtgttttccggaaaataaaaattttacgagg 10690874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 12369631 - 12369669
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12369631 tattaggggtgttttccggaaaataaaaattttacgagg 12369669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 18618376 - 18618338
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18618376 tattaggggtgttttccggaaaataaaaattttacgagg 18618338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 20352751 - 20352713
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20352751 tattaggggtgttttccggaaaataaaaattttacgagg 20352713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 21000521 - 21000559
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  21000521 tattaggggtgtttttcggaaaataaaatttttacgagg 21000559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 21262771 - 21262809
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  21262771 tattaggggtgttttccggaaaataaaaattttacgagg 21262809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 27830073 - 27830035
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  27830073 tattaagggtgtttttcggaaaataaaaattttacgagg 27830035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 34974169 - 34974207
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34974169 tattaagggtgtttttcggaaaataaaaattttacgagg 34974207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 40616364 - 40616402
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  40616364 tattaagggtgtttttcggaaaataaaaattttacgagg 40616402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 2841803 - 2841765
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  2841803 tattaggggtgttttctggaaaataaaaattttacgagg 2841765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 11762366 - 11762328
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  11762366 tattaggggtgttttccggaaaatgaaaattttacgagg 11762328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 13892732 - 13892770
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  13892732 tattagggatgttttccggaaaataaaaattttacgagg 13892770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 13952625 - 13952663
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  13952625 tattaggggtgttttccggaaaataaaatttttacgagg 13952663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 14946522 - 14946484
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  14946522 tattaagggtgttttttggaaaataaaaattttacgagg 14946484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 18805281 - 18805243
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  18805281 tattaggggtgttttccggaaaataaaaaatttacgagg 18805243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 20884201 - 20884239
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  20884201 tattaggggtgttttccggaaaataaacattttacgagg 20884239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 27451414 - 27451376
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  27451414 tattaagggtgttttccggaaaataaaaattttacgagg 27451376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 29989582 - 29989544
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  29989582 tattaggggtgtttttcgaaaaataaaatttttacgagg 29989544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 29989633 - 29989671
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  29989633 tattaaggttgtttttcggaaaataaaaattttacgagg 29989671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 39886631 - 39886593
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  39886631 tattaagggtgttttccggaaaataaaaattttacgagg 39886593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 16867927 - 16867963
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||||||||||||| || ||||||||||||||||||    
T  16867927 tattaggggtgttttccgaaaaataaaaattttacga 16867963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 25881150 - 25881114
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||||||||||||| || ||||||||||||||||||    
T  25881150 tattaggggtgttttccgaaaaataaaaattttacga 25881114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 5047285 - 5047247
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  5047285 tattaggggggtttttcggaaaataaaaattttacgagg 5047247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 7731388 - 7731350
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  7731388 tattaggggtgttttccggaaaataaaaattttacgagg 7731350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 7731436 - 7731474
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7731436 tattaagggtgtttttcggaaaataaaaattttacgagg 7731474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 8764066 - 8764104
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8764066 tattaggggtgttttccggaaaataaaaattttacgagg 8764104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 12998816 - 12998778
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12998816 tattaggggtgttttccggaaaataaaaattttacgagg 12998778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 39825562 - 39825524
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39825562 tattaggggtgttttccggaaaataaaaattttacgagg 39825524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 40004042 - 40004080
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40004042 tattaggggtgttttccggaaaataaaaattttacgagg 40004080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 54014675 - 54014637
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  54014675 tattaggggtatttttcggaaaataaaaattttacgagg 54014637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 40003993 - 40003956
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgag 322  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  40003993 tattaagggtgtttttcggaaaataaaaattttacgag 40003956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 33312502 - 33312538
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| |||||||||||||||||||||||||||||||    
T  33312502 tattaagggtgtttttcggaaaataaaaattttacga 33312538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 3526657 - 3526619
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  3526657 tattaggggtgtttttcggaaaataaattttttacgagg 3526619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 7014847 - 7014809
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  7014847 tattaggggtgttttctggaaaataaaaattttacgagg 7014809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 7862565 - 7862603
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  7862565 tattaagggtgtttttcgaaaaataaaaattttacgagg 7862603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 9268740 - 9268778
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  9268740 tattaggggtgttttccggaaaataaaaaatttacgagg 9268778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 11915008 - 11915046
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  11915008 tattaggggtgttttccggaaaataaaatttttacgagg 11915046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 16343754 - 16343716
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  16343754 tattaggggtgttttccggaaaataaaatttttacgagg 16343716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 16871341 - 16871379
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  16871341 tattaggggtgttttccgaaaaataaaaattttacgagg 16871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 18546492 - 18546454
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  18546492 tattaggggtatttttcggaaaataaaaattttatgagg 18546454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 21015358 - 21015320
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  21015358 tattaagggtgtttttcggaaaataaaaagtttacgagg 21015320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 21015407 - 21015445
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  21015407 tattagaggtgttttccggaaaataaaaattttacgagg 21015445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 21802330 - 21802292
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  21802330 tattaagggtgttttccggaaaataaaaattttacgagg 21802292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 25025041 - 25025003
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  25025041 tattaggggtgttttctggaaaataaaaattttacgagg 25025003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 37585802 - 37585840
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  37585802 tattaggggtgttttctggaaaataaaaattttacgagg 37585840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 39937134 - 39937096
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  39937134 tattaggggtgttttccagaaaataaaaattttacgagg 39937096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 39937184 - 39937222
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  39937184 tattaagggtgttttccggaaaataaaaattttacgagg 39937222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 52866127 - 52866165
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  52866127 tattaggggtgttttctggaaaataaaaattttacgagg 52866165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 54014723 - 54014761
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  54014723 tattaagggtgttttccggaaaataaaaattttacgagg 54014761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 55120783 - 55120821
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  55120783 tattaggggtgttttccgaaaaataaaaattttacgagg 55120821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 26996187 - 26996223
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  26996187 tattaagggtgttttccggaaaataaaaattttacga 26996223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 30751344 - 30751380
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  30751344 tattaagggtgttttccggaaaataaaaattttacga 30751380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 6954047 - 6954085
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  6954047 tattaggggtgttttccggaaaataaaaattttacgagg 6954085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 12163330 - 12163368
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12163330 tattaggggtgttttccggaaaataaaaattttacgagg 12163368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 15734728 - 15734766
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  15734728 tattaggggtgttttccggaaaataaaaattttacgagg 15734766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 16985308 - 16985270
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  16985308 tattaagggtgtttttcggaaaataaaaattttacgagg 16985270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 24169274 - 24169312
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24169274 tattaagggtgtttttcggaaaataaaaattttacgagg 24169312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 27270455 - 27270417
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  27270455 tattaggggtgttttccggaaaataaaaattttacgagg 27270417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 15734641 - 15734677
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15734641 tattaggggtgttttccggaaaataaaaattttacga 15734677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 9403488 - 9403526
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  9403488 tattaggggtgttttctggaaaataaaaattttacgagg 9403526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 9631822 - 9631860
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  9631822 tattaggggtgttttccggaaaataaaatttttacgagg 9631860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 15541547 - 15541509
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  15541547 tattaggtgtgttttccggaaaataaaaattttacgagg 15541509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 16985357 - 16985395
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  16985357 tattagaggtgttttccggaaaataaaaattttacgagg 16985395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 22374680 - 22374642
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  22374680 tattaggggtgttttctggaaaataaaaattttacgagg 22374642  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 38601288 - 38601250
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  38601288 tattaggggtgttttccgaaaaataaaaattttacgagg 38601250  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 39935049 - 39935011
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  39935049 tattaagggtgttttccggaaaataaaaattttacgagg 39935011  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 39935098 - 39935136
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  39935098 tattaggggtgttttccggaaaataaaatttttacgagg 39935136  T

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Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 40633206 - 40633168
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  40633206 tattaagggtgttttccggaaaataaaaattttacgagg 40633168  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 9631773 - 9631736
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgag 322  Q
    |||||||||||||||  |||||||||||||||||||||    
T  9631773 tattaggggtgttttcaggaaaataaaaattttacgag 9631736  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 23284846 - 23284883
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgag 322  Q
    ||||| || |||||||||||||||||||||||||||||    
T  23284846 tattaaggatgtttttcggaaaataaaaattttacgag 23284883  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 1613760 - 1613796
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  1613760 tattaagggtgttttccggaaaataaaaattttacga 1613796  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 1819250 - 1819286
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacga 321  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  1819250 tattaggggtgttttccggaaaataaaatttttacga 1819286  T

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Target: scaffold0744 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 1421 - 1383
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  1421 tattaagggtgttttccggaaaataaaaattttacgagg 1383  T

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Target: scaffold0734 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 3089 - 3051
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  3089 tattaagggtgtttttcggaaaataaaatttttacgagg 3051  T

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Target: scaffold0599 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 6759 - 6797
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  6759 tattaggggtgttttccggaaaataaaatttttacgagg 6797  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 9744 - 9782
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  9744 tattatgggtgtttttcggaaaataaaaattttatgagg 9782  T

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Target: scaffold0235 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 12656 - 12694
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  12656 tattaggggtgttttccggaaaataaaatttttacgagg 12694  T

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Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 24358 - 24396
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  24358 tattaggggtgttttccggaaaataaaatttttacgagg 24396  T

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Target: scaffold0199 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 11960 - 11922
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  11960 tattaagggtgttttccggaaaataaaaattttacgagg 11922  T

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Target: scaffold0199; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 12008 - 12046
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  12008 tattaagggtgttttccggaaaataaaaattttacgagg 12046  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 62252 - 62290
Alignment:
Q  285 tattaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  62252 tattaagggtgttttccggaaaataaaaattttacgagg 62290  T

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Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 57506 - 57470
Alignment:
Q  287 ttaggggtgtttttcggaaaataaaaattttacgagg 323  Q
    ||||||||||||| || ||||||||||||||||||||    
T  57506 ttaggggtgttttccgaaaaataaaaattttacgagg 57470  T

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Target: scaffold0148 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 24546 - 24514
Alignment:
Q  284 atattaggggtgtttttcggaaaataaaaattt 316  Q
    |||||||||||||||| ||||||||||||||||    
T  24546 atattaggggtgttttccggaaaataaaaattt 24514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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