View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17594_high_18 (Length: 319)
Name: NF17594_high_18
Description: NF17594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17594_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 18 - 316
Target Start/End: Original strand, 26754897 - 26755194
Alignment:
| Q |
18 |
agattagtcagttaattgaggaaaggacaaatgctttgtgtgccaccctcataaaattttcgacatgactgaagacatgtaaaccaacacacacacagtt |
117 |
Q |
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| T |
26754897 |
agattagtc-gttaattgaggaaaggacaaatgctttgtgtgccaccctcataaaattttcgacatgactgaagacatgtaaaccaacacacagacggtt |
26754995 |
T |
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| Q |
118 |
aattaagcatcagcaaactaatttcttcatcaacttgttaccttatcatgcaagaaatcatgactatgataataaaaatgattatactgtttgttaagtt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26754996 |
aattaagcatcagcaaactaatttcttcatcaacttgttaccttatcatgcaagaaatcatgactataataataaaaatgattatactgtttgttaagtt |
26755095 |
T |
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| Q |
218 |
tatttccccttttcagcacaatttgagaagaacgtgaaggtagatctatctctatttgacaaacttgttggtccacctcactcggccttcatctcagtc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
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| T |
26755096 |
tatttccccttttcagcacaatttgagaagaacgtgaaggtagatctatctctatttgacaaacttgttggtccacctcactcggcctccatcgcagtc |
26755194 |
T |
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