View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17594_high_20 (Length: 305)
Name: NF17594_high_20
Description: NF17594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17594_high_20 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 43 - 299
Target Start/End: Original strand, 19855587 - 19855844
Alignment:
| Q |
43 |
aaggacacatagataagaaggaaacatgacatgattatcattagaaattaaaagcacccatttacagcatatagagaaagaagacattggactaaaacca |
142 |
Q |
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| T |
19855587 |
aaggacacatagataagaaggaaagatgacatgattatcattagaaattaaaagcacccatttacagcatatagagaaagaagacattggaccaaaacca |
19855686 |
T |
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| Q |
143 |
aacatctactacttaattagcaacggttcaaagtaaattaaaactcccaacacccacttaactaataaacctaaacggtcaacaacaaaacataaattgc |
242 |
Q |
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| T |
19855687 |
aacatctactacttaattagcaacggttcaaagtaaattaaaactcccaacacccacttcactgataaacctaaacggtcaacaacaaaacatgaattgc |
19855786 |
T |
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| Q |
243 |
atttaaaattagattctaaatagaaaaaa-cctatgaaatcataaccctactaagcaa |
299 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
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| T |
19855787 |
atttaaaattagattctaaatagaaaaaaccctatgaaatcataaccctacttagcaa |
19855844 |
T |
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