View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17594_high_3 (Length: 775)

Name: NF17594_high_3
Description: NF17594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17594_high_3
NF17594_high_3
[»] chr8 (25 HSPs)
chr8 (261-759)||(13273767-13274267)
chr8 (242-316)||(2968908-2968982)
chr8 (239-315)||(14600357-14600433)
chr8 (240-315)||(10334870-10334945)
chr8 (240-315)||(37613030-37613105)
chr8 (242-315)||(4757542-4757615)
chr8 (239-324)||(13570426-13570511)
chr8 (239-315)||(2234129-2234205)
chr8 (242-305)||(21471950-21472013)
chr8 (239-298)||(24790829-24790888)
chr8 (239-314)||(30026541-30026616)
chr8 (240-314)||(5526197-5526271)
chr8 (242-315)||(7281946-7282019)
chr8 (238-315)||(31202842-31202919)
chr8 (242-299)||(38545478-38545535)
chr8 (239-299)||(9501978-9502038)
chr8 (240-299)||(5457460-5457519)
chr8 (239-298)||(7579514-7579573)
chr8 (240-299)||(8054474-8054533)
chr8 (239-302)||(20993199-20993262)
chr8 (351-426)||(32778782-32778857)
chr8 (243-293)||(1809901-1809951)
chr8 (240-314)||(4021145-4021219)
chr8 (240-298)||(10148347-10148405)
chr8 (242-299)||(41362143-41362200)
[»] chr5 (38 HSPs)
chr5 (25-225)||(17731825-17732025)
chr5 (140-219)||(17591442-17591521)
chr5 (239-315)||(6635642-6635718)
chr5 (240-303)||(9196683-9196746)
chr5 (240-314)||(32309891-32309965)
chr5 (240-324)||(7151181-7151265)
chr5 (240-315)||(18654176-18654251)
chr5 (243-315)||(3740726-3740798)
chr5 (239-315)||(11734496-11734572)
chr5 (239-315)||(17095892-17095968)
chr5 (239-315)||(17331722-17331798)
chr5 (242-314)||(6639374-6639448)
chr5 (239-298)||(23881767-23881826)
chr5 (240-315)||(34431458-34431533)
chr5 (242-284)||(13677510-13677552)
chr5 (240-294)||(39531060-39531114)
chr5 (352-424)||(6635485-6635557)
chr5 (239-307)||(19200247-19200315)
chr5 (239-315)||(26294004-26294080)
chr5 (240-292)||(37219398-37219450)
chr5 (239-315)||(39179496-39179572)
chr5 (242-298)||(42396164-42396220)
chr5 (239-298)||(6681528-6681587)
chr5 (240-315)||(7771473-7771548)
chr5 (240-315)||(20483580-20483655)
chr5 (240-315)||(26294726-26294801)
chr5 (240-299)||(42505065-42505124)
chr5 (239-314)||(42781396-42781471)
chr5 (242-296)||(17687548-17687602)
chr5 (239-288)||(4726668-4726717)
chr5 (242-315)||(6281438-6281511)
chr5 (352-405)||(6681688-6681741)
chr5 (239-268)||(14910341-14910370)
chr5 (242-299)||(17218112-17218169)
chr5 (242-315)||(26905303-26905376)
chr5 (239-268)||(33164120-33164149)
chr5 (239-292)||(40775157-40775210)
chr5 (239-268)||(42609597-42609626)
[»] chr7 (41 HSPs)
chr7 (140-219)||(14735267-14735346)
chr7 (240-315)||(3266768-3266843)
chr7 (239-298)||(9785728-9785787)
chr7 (245-315)||(32643362-32643432)
chr7 (240-298)||(38277208-38277266)
chr7 (239-315)||(6667789-6667865)
chr7 (239-315)||(21991056-21991132)
chr7 (240-315)||(4621032-4621107)
chr7 (240-315)||(37593477-37593552)
chr7 (244-315)||(42603435-42603506)
chr7 (351-426)||(45949489-45949564)
chr7 (242-324)||(24319877-24319959)
chr7 (240-298)||(44482530-44482588)
chr7 (242-299)||(11833428-11833485)
chr7 (241-314)||(25112882-25112955)
chr7 (242-315)||(36578995-36579068)
chr7 (162-215)||(45688124-45688177)
chr7 (239-303)||(2622998-2623062)
chr7 (243-315)||(8180195-8180267)
chr7 (239-299)||(26017323-26017383)
chr7 (242-315)||(26771182-26771257)
chr7 (242-314)||(31254785-31254857)
chr7 (239-299)||(41288366-41288426)
chr7 (239-315)||(46025706-46025782)
chr7 (351-426)||(9137185-9137260)
chr7 (243-314)||(10574760-10574831)
chr7 (239-314)||(15017104-15017179)
chr7 (351-426)||(21954635-21954710)
chr7 (240-299)||(22751791-22751849)
chr7 (351-426)||(29352455-29352530)
chr7 (239-298)||(36253341-36253400)
chr7 (162-225)||(38114769-38114831)
chr7 (240-315)||(39532627-39532702)
chr7 (243-297)||(10037921-10037975)
chr7 (240-314)||(21603853-21603927)
chr7 (239-313)||(23808722-23808796)
chr7 (241-315)||(37375709-37375782)
chr7 (240-314)||(39989841-39989915)
chr7 (240-298)||(48304044-48304102)
chr7 (239-289)||(48643477-48643527)
chr7 (143-225)||(5468174-5468258)
[»] scaffold0536 (1 HSPs)
scaffold0536 (239-315)||(3289-3365)
[»] chr3 (41 HSPs)
chr3 (239-315)||(55455256-55455332)
chr3 (239-315)||(13701661-13701737)
chr3 (242-314)||(48401487-48401559)
chr3 (244-315)||(11225727-11225798)
chr3 (240-315)||(49627764-49627839)
chr3 (242-314)||(2192473-2192545)
chr3 (358-426)||(4019827-4019895)
chr3 (239-315)||(14585856-14585932)
chr3 (239-315)||(39610601-39610676)
chr3 (239-298)||(105707-105766)
chr3 (239-298)||(11819495-11819554)
chr3 (240-315)||(41867993-41868068)
chr3 (240-315)||(53155090-53155165)
chr3 (240-315)||(55090359-55090434)
chr3 (252-306)||(7658399-7658453)
chr3 (240-314)||(25111829-25111903)
chr3 (242-315)||(3457316-3457389)
chr3 (142-215)||(7639963-7640036)
chr3 (352-405)||(19861099-19861152)
chr3 (242-299)||(30293188-30293245)
chr3 (242-315)||(31462417-31462490)
chr3 (242-315)||(34960591-34960663)
chr3 (351-424)||(49627914-49627987)
chr3 (242-315)||(50981128-50981201)
chr3 (242-315)||(51084262-51084335)
chr3 (351-424)||(55446294-55446367)
chr3 (351-424)||(55455108-55455181)
chr3 (239-314)||(19148370-19148446)
chr3 (239-315)||(30155949-30156025)
chr3 (243-315)||(32080426-32080498)
chr3 (239-315)||(33637788-33637864)
chr3 (243-315)||(40883538-40883610)
chr3 (248-315)||(4817548-4817615)
chr3 (239-314)||(19645585-19645660)
chr3 (239-298)||(24483355-24483414)
chr3 (240-315)||(38379414-38379489)
chr3 (240-298)||(36623923-36623981)
chr3 (238-315)||(40012930-40013007)
chr3 (239-316)||(45047890-45047967)
chr3 (242-315)||(48212727-48212800)
chr3 (239-268)||(53126264-53126293)
[»] chr2 (45 HSPs)
chr2 (240-315)||(33012442-33012517)
chr2 (239-317)||(13113403-13113481)
chr2 (240-324)||(35333890-35333974)
chr2 (239-315)||(36868402-36868478)
chr2 (239-314)||(16570728-16570803)
chr2 (239-303)||(3527392-3527456)
chr2 (243-315)||(5754676-5754748)
chr2 (239-315)||(13878660-13878736)
chr2 (239-315)||(14018785-14018861)
chr2 (239-315)||(16136472-16136548)
chr2 (239-315)||(25068235-25068311)
chr2 (239-303)||(27665942-27666006)
chr2 (239-315)||(43696262-43696338)
chr2 (239-298)||(17267777-17267836)
chr2 (240-315)||(20560785-20560860)
chr2 (240-299)||(29543203-29543262)
chr2 (238-292)||(26491697-26491751)
chr2 (351-424)||(4732307-4732380)
chr2 (242-315)||(7071429-7071502)
chr2 (239-307)||(4703533-4703601)
chr2 (239-315)||(4739723-4739799)
chr2 (351-426)||(11798339-11798415)
chr2 (239-315)||(12890768-12890844)
chr2 (239-299)||(15920263-15920323)
chr2 (239-299)||(27096099-27096159)
chr2 (352-424)||(34962888-34962960)
chr2 (239-315)||(38384117-38384193)
chr2 (239-315)||(43473796-43473872)
chr2 (243-303)||(44942692-44942752)
chr2 (239-314)||(11798189-11798264)
chr2 (351-426)||(17767377-17767452)
chr2 (240-315)||(18089064-18089139)
chr2 (240-315)||(20570352-20570427)
chr2 (240-315)||(28230749-28230824)
chr2 (239-298)||(34416414-34416473)
chr2 (240-315)||(40038975-40039050)
chr2 (352-426)||(5754517-5754591)
chr2 (246-312)||(17792854-17792920)
chr2 (241-315)||(28261558-28261632)
chr2 (351-405)||(31811827-31811881)
chr2 (351-424)||(9689796-9689869)
chr2 (242-315)||(12705080-12705153)
chr2 (352-405)||(16136334-16136387)
chr2 (239-268)||(33055809-33055838)
chr2 (353-426)||(37883882-37883955)
[»] chr1 (33 HSPs)
chr1 (242-315)||(25032757-25032830)
chr1 (239-298)||(12872017-12872076)
chr1 (240-314)||(42491264-42491338)
chr1 (242-315)||(3233165-3233238)
chr1 (239-315)||(16141005-16141081)
chr1 (239-315)||(29205662-29205738)
chr1 (239-298)||(4882028-4882087)
chr1 (240-315)||(10188542-10188617)
chr1 (240-299)||(10304973-10305032)
chr1 (247-314)||(29938595-29938662)
chr1 (240-315)||(30678633-30678708)
chr1 (239-298)||(44517559-44517618)
chr1 (242-324)||(33486690-33486772)
chr1 (239-292)||(13969305-13969358)
chr1 (240-292)||(11121372-11121424)
chr1 (239-315)||(15390903-15390979)
chr1 (242-314)||(25689507-25689579)
chr1 (239-315)||(28677790-28677866)
chr1 (239-315)||(32784473-32784549)
chr1 (352-424)||(42276592-42276664)
chr1 (240-315)||(11877114-11877189)
chr1 (240-315)||(37822015-37822090)
chr1 (351-426)||(47551324-47551399)
chr1 (242-315)||(10599259-10599331)
chr1 (239-268)||(10627446-10627475)
chr1 (153-214)||(11546025-11546086)
chr1 (239-268)||(13152868-13152897)
chr1 (242-327)||(13488190-13488275)
chr1 (242-303)||(17347981-17348042)
chr1 (351-424)||(18343849-18343922)
chr1 (239-268)||(26200000-26200029)
chr1 (242-299)||(26771495-26771552)
chr1 (239-292)||(46589544-46589597)
[»] chr6 (27 HSPs)
chr6 (239-315)||(30813451-30813527)
chr6 (239-298)||(15589776-15589835)
chr6 (240-315)||(19402504-19402579)
chr6 (240-314)||(31680816-31680890)
chr6 (241-314)||(5527301-5527374)
chr6 (239-327)||(2304489-2304577)
chr6 (239-315)||(2488516-2488592)
chr6 (239-299)||(5545069-5545129)
chr6 (239-315)||(23654643-23654719)
chr6 (240-315)||(12653970-12654045)
chr6 (351-426)||(12654120-12654195)
chr6 (239-293)||(4660844-4660898)
chr6 (352-424)||(4394007-4394079)
chr6 (239-315)||(5146320-5146396)
chr6 (240-292)||(20496589-20496641)
chr6 (239-299)||(31705575-31705635)
chr6 (240-316)||(31936285-31936361)
chr6 (239-315)||(35219564-35219640)
chr6 (239-298)||(1106514-1106573)
chr6 (239-298)||(4394181-4394240)
chr6 (239-298)||(12481030-12481089)
chr6 (240-298)||(8693323-8693381)
chr6 (352-426)||(13871438-13871512)
chr6 (352-405)||(2304650-2304703)
chr6 (242-315)||(6419533-6419606)
chr6 (244-313)||(14731001-14731070)
chr6 (239-268)||(21507505-21507534)
[»] chr4 (41 HSPs)
chr4 (240-315)||(8517111-8517186)
chr4 (242-300)||(23964058-23964116)
chr4 (242-315)||(7060708-7060781)
chr4 (239-324)||(20887408-20887493)
chr4 (152-225)||(50080829-50080902)
chr4 (242-314)||(7083475-7083547)
chr4 (239-315)||(24611449-24611525)
chr4 (239-315)||(27091102-27091178)
chr4 (239-299)||(29266555-29266615)
chr4 (239-299)||(42197963-42198023)
chr4 (240-315)||(393926-394001)
chr4 (240-315)||(477673-477748)
chr4 (239-298)||(13965954-13966013)
chr4 (240-315)||(45350722-45350797)
chr4 (240-315)||(45360201-45360276)
chr4 (240-314)||(24826034-24826108)
chr4 (239-292)||(14346827-14346880)
chr4 (239-315)||(24568368-24568442)
chr4 (239-283)||(1621292-1621336)
chr4 (239-315)||(6882338-6882414)
chr4 (239-315)||(6912074-6912150)
chr4 (239-315)||(18502493-18502569)
chr4 (352-424)||(30202275-30202347)
chr4 (239-315)||(43244032-43244108)
chr4 (351-426)||(5814575-5814650)
chr4 (240-303)||(8712914-8712977)
chr4 (239-298)||(24100544-24100603)
chr4 (240-299)||(25658571-25658630)
chr4 (242-293)||(33288811-33288862)
chr4 (240-315)||(41837708-41837783)
chr4 (240-303)||(55600198-55600261)
chr4 (240-290)||(7084361-7084411)
chr4 (241-315)||(44756692-44756766)
chr4 (240-306)||(56172216-56172282)
chr4 (239-293)||(56236482-56236536)
chr4 (239-292)||(12520015-12520068)
chr4 (240-305)||(13169112-13169177)
chr4 (353-426)||(14346660-14346733)
chr4 (244-293)||(31522362-31522411)
chr4 (351-424)||(38943959-38944032)
chr4 (242-299)||(50274378-50274435)
[»] scaffold0321 (2 HSPs)
scaffold0321 (352-426)||(6942-7016)
scaffold0321 (239-315)||(6780-6857)
[»] scaffold0155 (1 HSPs)
scaffold0155 (238-298)||(35486-35546)
[»] scaffold0001 (1 HSPs)
scaffold0001 (240-299)||(403900-403959)
[»] scaffold0432 (2 HSPs)
scaffold0432 (352-426)||(2254-2328)
scaffold0432 (242-299)||(2102-2159)
[»] scaffold0722 (1 HSPs)
scaffold0722 (239-300)||(5191-5252)
[»] scaffold0294 (1 HSPs)
scaffold0294 (239-315)||(3718-3794)
[»] scaffold0219 (1 HSPs)
scaffold0219 (350-404)||(21227-21281)
[»] scaffold0157 (1 HSPs)
scaffold0157 (239-292)||(843-896)
[»] scaffold0024 (1 HSPs)
scaffold0024 (243-300)||(36912-36969)


Alignment Details
Target: chr8 (Bit Score: 416; Significance: 0; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 261 - 759
Target Start/End: Original strand, 13273767 - 13274267
Alignment:
Q  261 tcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagataaaatgttgacaatgcaaaatctccaaaatatgact 360  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||| |||||  | |||||||||| |||||||||||    
T  13273767 tcattcaagtttatag-atacattgatacaatataaatttaaagtcgttaaaaatgtaaaggatgaaacgttgaagacgcaaaatctctaaaatatgact 13273865  T
Q  361 atattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgatagatagctcgaacattttgaaatacaagaccatc 460  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13273866 atatttaaatctctagaatacttgtgtctccgaatctgaaacgttaccgactcgaaagtcattgatagatagctcaaacattttgaaatacaagaccatc 13273965  T
Q  461 atcattttaaatcaacttgcattaaggaatagtttgaccacgagatttttaaaataaataagcctctttaaaaataagatcaccatcaatagaatggatc 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13273966 atcattttaaatcaacttgcattaaggaatagtttgaccacgagatttttaaaataaataagcctctttaaaaataagatcaccatcaatagaatggatc 13274065  T
Q  561 tacatatactagtctat---gatccttcacaataagaacaatgactcttgaaggtacataggaagattaggaaaattctgcaaaatcgagttaggacata 657  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  13274066 tacatatactagtttattaggatccttcacaataagaacaatgactcttgaaggtacataggaagattaggaaaattcggcaaaatcgagttaggatata 13274165  T
Q  658 cacataatcttcactcaaaaaaggattccctaagccaattaacatcccaaaactgaatagaattaccatcacaaagcttccataaaaaattatagtgaat 757  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13274166 cacataatcttcactcaaaaaaggattccctaagccaattaacatcccaaaactgaatagaattaccatcacaaagcttccataaaaaattatagtgaat 13274265  T
Q  758 at 759  Q
    ||    
T  13274266 at 13274267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 242 - 316
Target Start/End: Complemental strand, 2968982 - 2968908
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacg 316  Q
    ||||||||||||||||||||||||||| || ||||  ||||| ||||||||| | ||| ||||||||||||||||    
T  2968982 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacatattcaaagtcgttaaaaacg 2968908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 14600357 - 14600433
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||| |||||||||| || ||||  ||||| ||||||||| ||||||||| ||| |||||||    
T  14600357 gacaaaaataaacgatatttattcattcaaattaatagagtacatcgatacaatacaaatttaaattcgctaaaaac 14600433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 10334945 - 10334870
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||| ||||||||||| || ||||  |||||||||||||| |||||| ||| ||| |||||||    
T  10334945 acaaaaataaacgatatccattcattcaaattgatagagtacattgatacaatgtaaattcaaattcgctaaaaac 10334870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 37613105 - 37613030
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  || || ||||||||| ||||| ||| |||||||||||    
T  37613105 acaaaaataaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattcaaattcgttaaaaac 37613030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 4757615 - 4757542
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||| |||||||||||||||||||||| || ||||  ||||||||||||||| |||| |||| ||| |||||||    
T  4757615 aaaactaaacgatattcattcattcaaattgatagagtacattgatacaatacaaatctaaattcgctaaaaac 4757542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 13570426 - 13570511
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagat 324  Q
    ||||||||||||||||||||||||||| || || ||||  || || ||||||||| ||||||||| | |||||||||  |||||||    
T  13570426 gacaaaaataaacgatattcattcatttaaattgatagagtatatcgatacaatacaaatttaaatttgttaaaaacaaaaaagat 13570511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 2234129 - 2234205
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| |||| |||| ||||| ||| ||| |||||||    
T  2234129 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaac 2234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 21472013 - 21471950
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagt 305  Q
    ||||||||| ||||||| |||||||||||||||||  || |||||||||||| ||||| |||||    
T  21472013 aaaaataaaagatattctttcattcaagtttatagactatattgatacaatacaaattcaaagt 21471950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 24790829 - 24790888
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  24790829 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 24790888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 30026541 - 30026616
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||||||||||| |||||||||| || ||||  || |||||||||||| ||||| ||| ||| ||||||    
T  30026541 gacaaaaataaacgatatttattcattcaaattgatagagtatattgatacaatacaaattcaaattcgctaaaaa 30026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 5526271 - 5526197
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||||||||||||| |||||||||| || ||||  ||||| |||||||||||| || ||| ||| ||||||    
T  5526271 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatataagttcaaattcgctaaaaa 5526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 7282019 - 7281946
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||  | |||||||  || || |||| |||||||||||||||||  |||||||    
T  7282019 aaaaataaacgatattcattcattttaatttatagagtatatcgatataatataaatttaaagtctctaaaaac 7281946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 31202919 - 31202842
Alignment:
Q  238 ggacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||||| || ||||  ||||| |||| |||| ||||  ||| ||| |||||||    
T  31202919 ggacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaac 31202842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 38545478 - 38545535
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||||||||||||||||||| || ||||  || || |||||||||||||||    
T  38545478 aaaaataaacgatattcattcattcaaattgatagagtatatcgatacaatataaatt 38545535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 9502038 - 9501978
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||| |||||||||||||||||||||| || ||||  ||||| ||||||||| |||||    
T  9502038 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 9501978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 5457519 - 5457460
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||| ||||||||||||||||| || ||||  ||||| |||| ||||||||||    
T  5457519 acaaaaataaatgatattcattcattcaaattgatagagtacatcgatataatataaatt 5457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 7579514 - 7579573
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||| |||| ||||||||||||||||| || ||||  ||||| ||||||||||||||    
T  7579514 gacaaaactaaatgatattcattcattcaaattgatagagtacatcgatacaatataaat 7579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 8054474 - 8054533
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||| ||||||||||||||||| || |||| |||||| |||| |||| |||||    
T  8054474 acaaaaataaatgatattcattcattcaaattgatagaatacatcgatataatacaaatt 8054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 20993262 - 20993199
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaa 302  Q
    ||||||||||||| |||||||||||||||| || ||||  | ||| |||| |||||||||||||    
T  20993262 gacaaaaataaactatattcattcattcaaattgatagattgcatcgatataatataaatttaa 20993199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 32778782 - 32778857
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    |||||||||||||||||| |||| ||||||||  || ||||  |||||||| |||  |||||| ||||||||||||    
T  32778782 aaatatgactatattcaagtctccagaatactcatgtctccagatctgcaaagttgacgacgcaaaagtcattgat 32778857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 1809901 - 1809951
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaata 293  Q
    |||||||||||||||||||||||||| || ||||  ||||| |||||||||    
T  1809901 aaaataaacgatattcattcattcaaattgatagagtacatcgatacaata 1809951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 4021219 - 4021145
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||||||  |||||||||||||||| || ||    ||||| ||||||||||||||||||| ||| ||||||    
T  4021219 acaaaaataaattatattcattcattcaaattgattatgtacatcgatacaatataaatttaaaatcgctaaaaa 4021145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 10148405 - 10148347
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||| |||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  10148405 acaaaaataaacaatattcattcattcaaattgatagattacatcgatacaatacaaat 10148347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 41362200 - 41362143
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||||||||||||||||||| || ||||  |||||  |||||||| |||||    
T  41362200 aaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatt 41362143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 5e-95; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 17731825 - 17732025
Alignment:
Q  25 ttaatagttcgaatgatcaattaaacattctatttaaatacaagatttgttgggtatttgtttcttatatgttgaaaagaacaactctaacccatttaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17731825 ttaatagttcgaatgatcaattaaacattctatttaaatacaagatttgttgggtatttgtttcttatacgttgaaaagaacaactctaacccatttaaa 17731924  T
Q  125 ttatgaacattatacacaatatatttaatgaaaataattagattttgattaaaattatacgtatcaatgtttgcggtttcaaattgtaacaacatgctta 224  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  17731925 ttatgaacattataaacaatatcttgaatgaaaataattagattttgattaaaattatacgtattaatgtttgcggtttcaaattgtaacaatatgctta 17732024  T
Q  225 t 225  Q
    |    
T  17732025 t 17732025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 17591442 - 17591521
Alignment:
Q  140 acaatatatttaatgaaaataattagattttgattaaaattatacgtatcaatgtttgcggtttcaaattgtaacaacat 219  Q
    |||||||||||||||||| || ||| |||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||    
T  17591442 acaatatatttaatgaaattagttaaattttgattaaaattataggtatcgatgtttgcgatttcaaattgcaacaacat 17591521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 6635718 - 6635642
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||| ||||||||||||| || ||||  ||||| ||||||||||||||| ||| |||||||||||    
T  6635718 gacaaaaataaacgattttcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgttaaaaac 6635642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 9196683 - 9196746
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaa 303  Q
    ||||||||||||||||||||||||||||| || ||||  |||||||||| ||||||||||||||    
T  9196683 acaaaaataaacgatattcattcattcaaattgatagagtacattgatataatataaatttaaa 9196746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 32309965 - 32309891
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||||||||||||| |||||||||| || ||||  ||||| |||| |||||||||| ||||||||||||||    
T  32309965 acaaaaataaacgatattgattcattcaaattgatagagtacatcgatataatataaattcaaagtcgttaaaaa 32309891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 7151265 - 7151181
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagat 324  Q
    |||||||||||||||||||||||||| || |  ||||  || |||||||||||| ||||| |||||||||||||||  |||||||    
T  7151265 acaaaaataaacgatattcattcattaaaatcgatagagtaaattgatacaatacaaattcaaagtcgttaaaaacaaaaaagat 7151181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 18654251 - 18654176
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||| |||||||||||||||||| || ||||  ||||||||||||||||||||  ||| ||| |||||||    
T  18654251 acaaaaataagcgatattcattcattcaaattgatagactacattgatacaatataaatccaaattcgctaaaaac 18654176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 3740798 - 3740726
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||| || ||||  ||||||||||||||  ||||| ||| ||| |||||||    
T  3740798 aaaataaacgatattcattcattcaaattgatagagtacattgatacaatccaaattcaaattcgctaaaaac 3740726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 11734496 - 11734572
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || |||   ||||| ||||||||| ||||| ||| ||| |||||||    
T  11734496 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaattcaaattcgctaaaaac 11734572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 17095892 - 17095968
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||| |||||||||||||| || ||||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  17095892 gacaaaaataaacgacattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaac 17095968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 17331798 - 17331722
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  17331798 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 17331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 6639448 - 6639374
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtt--tataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||||||||||||||||||| ||  || || |||||| |||||||||||||||| || ||| ||||||    
T  6639448 aaaaataaacgatattcattcattcaaattggtagagtatacatcgatacaatataaatttcaaatcgctaaaaa 6639374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 23881767 - 23881826
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  23881767 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 23881826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 34431533 - 34431458
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  34431533 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 34431458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 13677552 - 13677510
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacatt 284  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  13677552 aaaaataaacgatattcattcattcaagttgatagaatacatt 13677510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 39531060 - 39531114
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatat 294  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||||    
T  39531060 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatat 39531114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 6635557 - 6635485
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    ||||||| ||||||||||||||  |||||||  || ||||| ||||||||||||  |||||| ||||||||||    
T  6635557 aatatgattatattcaaatctccggaatactcatgtctccggatctgcaacgttgacgacgccaaagtcattg 6635485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 19200247 - 19200315
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcg 307  Q
    ||||||||||||| |||||||||||||||| || |||   ||||| ||||||| |||||| ||||||||    
T  19200247 gacaaaaataaacaatattcattcattcaaattaataaagtacatcgatacaacataaatctaaagtcg 19200315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 26294080 - 26294004
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| |  ||||  ||| | ||||||||| ||||| ||| ||| |||||||    
T  26294080 gacaaaaataaacgatattcattcattcaaatagatagagtacgtcgatacaatacaaattcaaattcgctaaaaac 26294004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 37219450 - 37219398
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    |||||||||||||| |||||||||||||| || ||||  ||||||||||||||    
T  37219450 acaaaaataaacgaaattcattcattcaaattgatagagtacattgatacaat 37219398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 39179496 - 39179572
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || |||   ||||| ||||||||| ||||  ||| ||| |||||||    
T  39179496 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaac 39179572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 42396164 - 42396220
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||||||||||||||||||| || |||| ||| || ||||||||| ||||    
T  42396164 aaaaataaacgatattcattcattcaaattgatagaatatatcgatacaatacaaat 42396220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 6681528 - 6681587
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||| | || ||||  ||||| ||||||||| ||||    
T  6681528 gacaaaaataaacgatattcattcattctaattgatagagtacatcgatacaatacaaat 6681587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 7771473 - 7771548
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||| |||||||||| || |||   ||||| ||||||||| |||| |||| ||| |||||||    
T  7771473 acaaaaataaacgatatttattcattcaaattgatatagtacatcgatacaatacaaatctaaattcgctaaaaac 7771548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 20483655 - 20483580
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| |||| |||| ||||  ||| ||| |||||||    
T  20483655 acaaaaataaacgatattcattcattcaaattaatagagtacatcgatataatacaaatccaaattcgctaaaaac 20483580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 26294726 - 26294801
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||| ||||||||||||||| || ||||  || || ||||||||| |||| |||| ||| |||||||    
T  26294726 acaaaaataaacggtattcattcattcaaattgatagagtatatcgatacaatacaaatctaaattcgctaaaaac 26294801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 42505065 - 42505124
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||||||||||||||||||||| || ||||  |||||  |||||||| |||||    
T  42505065 acaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatt 42505124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 42781471 - 42781396
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||||||||||| ||| |||||| || ||||  | ||| ||||||||| ||||| ||||||| ||||||    
T  42781471 gacaaaaataaacgatatttatttattcaaattgatagagtgcatcgatacaatacaaattcaaagtcgctaaaaa 42781396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 17687602 - 17687548
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataa 296  Q
    |||||||||||||||||||||||||||  |||| |  ||||||| ||||||||||    
T  17687602 aaaaataaacgatattcattcattcaaaattattgagtacattgttacaatataa 17687548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 4726668 - 4726717
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgata 288  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||||||||    
T  4726668 gacaaaaataaatgatattcattcattcaaattgatagagtacattgata 4726717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 6281511 - 6281438
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||| |||||||||||||||||||||| || ||||  || || ||||||||| ||||| ||| ||| |||||||    
T  6281511 aaaagtaaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattcaaattcgctaaaaac 6281438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 6681688 - 6681741
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgtt 405  Q
    ||||||||||||||||| ||||  |||||||  || ||||||||||||||||||    
T  6681688 aatatgactatattcaagtctccggaatactcatgtctccgaatctgcaacgtt 6681741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 14910341 - 14910370
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  14910341 gacaaaaataaacgatattcattcattcaa 14910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 17218169 - 17218112
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||| ||||||||||||||||| || ||||  ||||| ||||||||| |||||    
T  17218169 aaaaataaatgatattcattcattcaaattgatagagtacatcgatacaataaaaatt 17218112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 26905303 - 26905376
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||| |||||||||||||| || || |||  |||| ||||||||||| ||||||| | ||| |||||||    
T  26905303 aaaaataaatgatattcattcattaaaattgatataataccttgatacaatacaaatttatattcgctaaaaac 26905376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 33164120 - 33164149
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  33164120 gacaaaaataaacgatattcattcattcaa 33164149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 40775210 - 40775157
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||| ||||||||    
T  40775210 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaat 40775157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 42609626 - 42609597
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  42609626 gacaaaaataaacgatattcattcattcaa 42609597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 14735346 - 14735267
Alignment:
Q  140 acaatatatttaatgaaaataattagattttgattaaaattatacgtatcaatgtttgcggtttcaaattgtaacaacat 219  Q
    |||||||||||||||||| || ||| |||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||    
T  14735346 acaatatatttaatgaaattagttaaattttgattaaaattataggtatcgatgtttgcgatttcaaattgcaacaacat 14735267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 3266843 - 3266768
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||| |||||||||||||||| || |||   ||||||||||||||| ||||| ||| |||||||||||    
T  3266843 acaaaaataaacaatattcattcattcaaattgataaagtacattgatacaatacaaattcaaattcgttaaaaac 3266768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 9785787 - 9785728
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||| ||||| ||||||||| ||||    
T  9785787 gacaaaaataaacgatattcattcattcaaattgatagggtacatcgatacaatacaaat 9785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 32643432 - 32643362
Alignment:
Q  245 aataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||| ||||  ||||  ||||||||||||||  ||| |||||||||||    
T  32643432 aataaacgatattcattcattcaagttgatagagtacaccgatacaatataaatccaaattcgttaaaaac 32643362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 38277266 - 38277208
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||||||||||||||||||||| || ||||  ||||||||||| ||||||||    
T  38277266 acaaaaataaacgatattcattcattcaaattgatagagtacattgatacgatataaat 38277208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 6667865 - 6667789
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||   |||| ||||||||| ||||| ||| ||| |||||||    
T  6667865 gacaaaaataaacgatattcattcattcaaattgatagagcacatcgatacaatacaaattcaaattcgctaaaaac 6667789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 21991132 - 21991056
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  21991132 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 21991056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 4621032 - 4621107
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||  ||||  ||| |||||||||||    
T  4621032 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaattcaaatccaaattcgttaaaaac 4621107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 37593552 - 37593477
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || || |  ||||| ||||||||| |||| |||| ||| |||||||    
T  37593552 acaaaaataaacgatattcattcattcaaattgatggagtacatcgatacaatacaaatctaaattcgctaaaaac 37593477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 42603435 - 42603506
Alignment:
Q  244 aaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||| ||||||||||||| || ||||  ||||| ||||||||||||||| ||| ||| |||||||    
T  42603435 aaataaacgatgttcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaac 42603506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 45949489 - 45949564
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||||||| |||||||  ||||| |  |||||||| ||||||||||||  |||||| ||||||||||||    
T  45949489 aaatatgactatattaaaatctccggaatagtcatgcctccggatctgcaacgttgacgacgccaaagtcattgat 45949564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 24319877 - 24319959
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagat 324  Q
    |||||||||||||||||||||||| || || ||||  ||||| ||||||||| |||| |||| ||| |||||||  |||||||    
T  24319877 aaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaaaagat 24319959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 44482530 - 44482588
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| |||| |||||||||    
T  44482530 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatataaat 44482588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 11833485 - 11833428
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||||||||||||||||||| || ||||  ||||| ||||||||| |||||    
T  11833485 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 11833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 25112955 - 25112882
Alignment:
Q  241 caaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||||||| ||||||||||||  | ||||  ||||| ||||||||||||| | ||||||| ||||||    
T  25112955 caaaaataaacgatagtcattcattcaaaatgatagagtacatcgatacaatataaaatcaaagtcgctaaaaa 25112882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 36578995 - 36579068
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||| ||||| || ||||  |||||| ||| |||||||||| ||| ||| |||||||    
T  36578995 aaaaataaacgatattcattcgttcaaattgatagagtacattaatataatataaattcaaattcgctaaaaac 36579068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 45688124 - 45688177
Alignment:
Q  162 ttagattttgattaaaattatacgtatcaatgtttgcggtttcaaattgtaaca 215  Q
    ||||||||| |||||| |||||||||| |||||||| | |||||||||||||||    
T  45688124 ttagattttaattaaatttatacgtataaatgtttgtgatttcaaattgtaaca 45688177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 2623062 - 2622998
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaa 303  Q
    |||||||||||||||||||||||||||||| || ||||  |||||  ||| ||||||||| ||||    
T  2623062 gacaaaaataaacgatattcattcattcaaattgatagagtacatctatataatataaatctaaa 2622998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 8180267 - 8180195
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||| || ||||  |||||| |||||||| ||||  ||| ||| |||||||    
T  8180267 aaaataaacgatattcattcattcaaattgatagagtacattcatacaatacaaatccaaattcgctaaaaac 8180195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 26017323 - 26017383
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||| |||| ||||||||||    
T  26017323 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatataatataaatt 26017383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 26771182 - 26771257
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttatagg--atacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||| |||| |||||||||||||| ||||| ||||   |||| ||||||||||||||||| ||||||| |||||||    
T  26771182 aaaagtaaatgatattcattcatttaagttgatagagtatactttgatacaatataaattcaaagtcggtaaaaac 26771257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 31254785 - 31254857
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||| ||||||||||||||||| || ||||  ||||| ||||||||| ||||| ||||| | ||||||    
T  31254785 aaaaataaaggatattcattcattcaaattgatagattacatcgatacaatacaaattcaaagttgctaaaaa 31254857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 41288426 - 41288366
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||||||||||| ||||||||| || ||||  ||||| ||||||||| |||||    
T  41288426 gacaaaaataaacgatattctttcattcaaattgatagagtacatcgatacaatacaaatt 41288366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 46025706 - 46025782
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || |||   ||||| ||||||||| ||||  ||| ||| |||||||    
T  46025706 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaac 46025782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 9137260 - 9137185
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||| |||||| ||||  |||||||| || ||||| ||||||||||||  |||||| ||||||| ||||    
T  9137260 aaatatgactaaattcaagtctccggaatacttatgtctccggatctgcaacgttgacgacgccaaagtcaatgat 9137185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 10574831 - 10574760
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||| ||||||||||||||||| || ||||  |||||  ||||||||||||| |||| ||| ||||||    
T  10574831 aaaataaatgatattcattcattcaaattgatagagtacatcaatacaatataaatctaaattcgctaaaaa 10574760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 15017104 - 15017179
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||| ||||||||||| ||| |||||| || |||  |||||| ||||||||| ||||| ||| ||||||||||    
T  15017104 gacaaaattaaacgatatttattgattcaaattgataaaatacatcgatacaatacaaattcaaattcgttaaaaa 15017179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 21954635 - 21954710
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    |||||||||||||||||| | ||  |||||||  || ||||| ||||||||||||  |||||| ||||||||||||    
T  21954635 aaatatgactatattcaagtgtccggaatactcatgactccggatctgcaacgttgacgacgccaaagtcattgat 21954710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 22751849 - 22751791
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||| |||||| ||||| ||||||||||||  ||||| |||||||||||||||    
T  22751849 acaaaaataaatgatatt-attcactcaagtttatagagtacatcgatacaatataaatt 22751791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 29352530 - 29352455
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    |||||||||||||||||| ||| | |||||||  |  ||||| ||||||||||||  |||||| ||||||||||||    
T  29352530 aaatatgactatattcaagtctttggaatactcatctctccggatctgcaacgttgacgacgcaaaagtcattgat 29352455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 36253400 - 36253341
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||||||||| |||||||||||| || ||||  ||||| ||||||||| ||||    
T  36253400 gacaaaaataaacgatactcattcattcaaattgatagagtacatcgatacaatacaaat 36253341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 38114769 - 38114831
Alignment:
Q  162 ttagattttgattaaaattatacgtatcaatgtttgcggtttcaaattgtaacaacatgcttat 225  Q
    |||||||||||||||| | ||| |||| |||||||| | ||||||||||||||||||| |||||    
T  38114769 ttagattttgattaaagt-atatgtataaatgtttgtgatttcaaattgtaacaacatccttat 38114831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 39532627 - 39532702
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||| |||||||||| || ||||  ||||  ||||||||| ||||| ||| ||| |||||||    
T  39532627 acaaaaataaacgatattaattcattcaaattgatagagtacaccgatacaatacaaattcaaattcgctaaaaac 39532702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 10037921 - 10037975
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaa 297  Q
    ||||||||  |||||||||| ||||| || |||| ||||||||||||||||||||    
T  10037921 aaaataaaatatattcattctttcaaattgatagaatacattgatacaatataaa 10037975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 21603927 - 21603853
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||| |||||||||||||||||||| || ||||  |||||  |||||||| ||||| ||| || |||||||    
T  21603927 acaaaaattaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcattaaaaa 21603853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 239 - 313
Target Start/End: Complemental strand, 23808796 - 23808722
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaa 313  Q
    |||||||||||||||||||||||||||||| || | ||  || || ||||||||| |||| |||| ||| |||||    
T  23808796 gacaaaaataaacgatattcattcattcaaattgagagagtatatcgatacaatacaaatctaaattcgctaaaa 23808722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 37375709 - 37375782
Alignment:
Q  241 caaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||| || ||||  |||| |||||||||| ||||  ||| ||| |||||||    
T  37375709 caaaaataaacgatattcattcattcaaattgatagagtaca-tgatacaatacaaatccaaattcgctaaaaac 37375782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 314
Target Start/End: Original strand, 39989841 - 39989915
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||| ||||||||| ||||||| || ||||  ||| |  |||||||||||||||||||| | ||||||    
T  39989841 acaaaaataaatgatattcatgcattcaaattgatagagtacgtcaatacaatataaatttaaagttgctaaaaa 39989915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 48304044 - 48304102
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||||||||||||||||||||| || |||   ||||| ||||||||| ||||    
T  48304044 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaat 48304102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 48643477 - 48643527
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatac 289  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| |||||    
T  48643477 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatac 48643527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 5468258 - 5468174
Alignment:
Q  143 atatatttaatgaaaataattagattttgattaaaatta--tacgtatcaatgtttgcggtttcaaattgtaacaacatgcttat 225  Q
    |||| ||| |||||| |||||||||||||| ||||||||  | |||||  ||||||| | || |||||||||||||||| |||||    
T  5468258 atattttttatgaaactaattagattttgaataaaattatgtgcgtatagatgtttgtgattacaaattgtaacaacatacttat 5468174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 3365 - 3289
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||||||||||||| ||| |||||||    
T  3365 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaatttaaattcgctaaaaac 3289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 3e-16; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 55455332 - 55455256
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||||||||||||| ||||| ||| ||| |||||||    
T  55455332 gacaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaattcaaattcgctaaaaac 55455256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 13701661 - 13701737
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  13701661 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaac 13701737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 48401559 - 48401487
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||||||||||||||||||| || ||||  ||||| ||||||||||||||| ||| ||| ||||||    
T  48401559 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaa 48401487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 11225798 - 11225727
Alignment:
Q  244 aaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||| || |||  ||| || ||||||||| ||||||||||| |||||||||    
T  11225798 aaataaacgatattcattcattcaaattgatataatatatcgatacaatagaaatttaaagttgttaaaaac 11225727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 49627764 - 49627839
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||||||||  ||| ||| |||||||    
T  49627764 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaac 49627839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 2192545 - 2192473
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||| ||| ||| ||||||    
T  2192545 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 2192473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 426
Target Start/End: Complemental strand, 4019895 - 4019827
Alignment:
Q  358 actatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||| |||| ||||||||  |||||||| ||||||||||||  |||||| ||||||||||||    
T  4019895 actatattcaagtctccagaatactcatgcctccggatctgcaacgttgacgacgccaaagtcattgat 4019827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 14585932 - 14585856
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  |||||  |||||||| ||||| ||| ||| |||||||    
T  14585932 gacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaac 14585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 39610676 - 39610601
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||| |||||||||||||||||| || ||||  ||||||||||||||| ||||| ||| ||| |||||||    
T  39610676 gacaaaaataa-cgatattcattcattcaaattaatagagtacattgatacaatacaaattcaaattcgctaaaaac 39610601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 105707 - 105766
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||||| |||||||||||||||| || ||||  ||||||||||||||| ||||    
T  105707 gacaaaaataaacaatattcattcattcaaattgatagagtacattgatacaatacaaat 105766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 11819554 - 11819495
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  11819554 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 11819495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 41867993 - 41868068
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||| ||||||||||| || ||||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  41867993 acaaaaataaacgatatgcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaac 41868068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 53155090 - 53155165
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||| || || ||||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  53155090 acaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaac 53155165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 55090359 - 55090434
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  55090359 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 55090434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 7658453 - 7658399
Alignment:
Q  252 gatattcattcattcaagtttataggatacattgatacaatataaatttaaagtc 306  Q
    ||||||||||||||||| || |||   ||||||||||||||||||||||||||||    
T  7658453 gatattcattcattcaaattgatatagtacattgatacaatataaatttaaagtc 7658399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 240 - 314
Target Start/End: Original strand, 25111829 - 25111903
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||| ||||||||||||||||| || ||||  ||||| |||| |||||||||| |||||  |||||||    
T  25111829 acaaaaataaatgatattcattcattcaaattaatagagtacatcgatataatataaattcaaagttattaaaaa 25111903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 3457389 - 3457316
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||| || || ||||  ||||||||||||||| ||||  ||| ||| |||||||    
T  3457389 aaaaataaacgatattcattcatttaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaac 3457316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 7639963 - 7640036
Alignment:
Q  142 aatatatttaatgaaaataattagattttgattaaaattatacgtatcaatgtttgcggtttcaaattgtaaca 215  Q
    ||||| ||| |||||| || ||| ||||||||| |||||||||||||  ||||||||| ||| |||||||||||    
T  7639963 aatattttttatgaaattagttatattttgattgaaattatacgtatagatgtttgcgattttaaattgtaaca 7640036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 19861099 - 19861152
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgtt 405  Q
    ||||||||||||||||| |||||||||||||  || ||||| ||||||||||||    
T  19861099 aatatgactatattcaagtctctagaatactcatgtctccggatctgcaacgtt 19861152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 30293245 - 30293188
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||||||||||||| |||| || |||| ||| |||||||||||| |||||    
T  30293245 aaaaataaacgatattcattcaatcaaattgatagaatatattgatacaatacaaatt 30293188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 31462417 - 31462490
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||| |||||||||||||||||||||| || |||   ||||| ||||||||| ||||||||| ||| |||||||    
T  31462417 aaaagtaaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatttaaattcgctaaaaac 31462490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 34960591 - 34960663
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||| || ||| || |||| ||||||||||||||  ||| ||| |||||||    
T  34960591 aaaaataaacgatattcattcattcaaattgata-gacacatcgatacaatataaatccaaattcgctaaaaac 34960663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 424
Target Start/End: Original strand, 49627914 - 49627987
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    |||||||||||||||||  ||||| |||||||  || ||||| ||||||||||||  |||||| ||||||||||    
T  49627914 aaatatgactatattcatgtctctggaatactcatgtctccggatctgcaacgttgacgacgccaaagtcattg 49627987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 50981128 - 50981201
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||| || ||||  |||||  ||| | || ||||||||||||| |||||||    
T  50981128 aaaaataaacgatattcattcattcaaattgatagagtacatcaatatagtacaaatttaaagtcgctaaaaac 50981201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 51084262 - 51084335
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||| || ||||  |||||  ||| | || ||||||||||||| |||||||    
T  51084262 aaaaataaacgatattcattcattcaaattgatagagtacatcaatatagtacaaatttaaagtcgctaaaaac 51084335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 424
Target Start/End: Complemental strand, 55446367 - 55446294
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    |||||||||||||||||| |||  ||||||||  || ||||| ||||||||||||  |||||| ||||||||||    
T  55446367 aaatatgactatattcaagtcttcagaatactcatgactccggatctgcaacgttgacgacgctaaagtcattg 55446294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 424
Target Start/End: Complemental strand, 55455181 - 55455108
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    |||||||||||||||||  ||||  |||||||  || ||||| ||||||||||||| |||||| ||||||||||    
T  55455181 aaatatgactatattcatgtctccggaatactcatgtctccggatctgcaacgttaacgacgccaaagtcattg 55455108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 19148446 - 19148370
Alignment:
Q  239 gacaaaaataaacgatatt-cattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||||||||||| ||||||||||| || ||||  ||||| ||||||||| ||||| ||| ||| ||||||    
T  19148446 gacaaaaataaacgatatttcattcattcaaattgatagtgtacatcgatacaatacaaattcaaattcgctaaaaa 19148370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 30155949 - 30156025
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||| |||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  30155949 gacaaaaataaacgatactcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 30156025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 32080426 - 32080498
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||| ||||||||| || ||||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  32080426 aaaataaacgatattctttcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaac 32080498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 33637864 - 33637788
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || |||   ||||| ||||||||| ||||  ||| ||| |||||||    
T  33637864 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaac 33637788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 40883538 - 40883610
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||| |||||||||||||||| || ||||  ||||||||||||||| ||||  ||| ||| |||||||    
T  40883538 aaaataaacaatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaac 40883610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 315
Target Start/End: Original strand, 4817548 - 4817615
Alignment:
Q  248 aaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||| ||||| |||||||||| || ||||  ||||||| ||||||||||||| ||| |||||||||||    
T  4817548 aaacaatatttattcattcaaattgatagagtacattggtacaatataaattcaaattcgttaaaaac 4817615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 19645660 - 19645585
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||||||||||||||||||||||||| || ||||  |||||  |||||||  ||||| ||| ||| ||||||    
T  19645660 gacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaattcaaattcaaattcgctaaaaa 19645585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 24483355 - 24483414
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| |||| |||| ||||    
T  24483355 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatagaatacaaat 24483414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 38379414 - 38379489
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||| |||||||||||| ||| |||||| || |||   ||||||||||||||| ||||| ||||| |||||||||    
T  38379414 acaaacataaacgatatttatttattcaaattgataaagtacattgatacaatacaaattcaaagttgttaaaaac 38379489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 36623923 - 36623981
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||| ||||||||||||||||| || ||||  ||||| | ||||||||||||    
T  36623923 acaaaaataaatgatattcattcattcaaattgatagagtacatcggtacaatataaat 36623981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 40012930 - 40013007
Alignment:
Q  238 ggacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||| |||||||||| || ||||  || || ||||||||| ||||  ||| ||| |||||||    
T  40012930 ggacaaaaataaacgatatttattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaac 40013007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 45047967 - 45047890
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacg 316  Q
    |||||||||||| ||||||||||||||||| || ||||  || || ||||||||| ||||  ||| ||| ||||||||    
T  45047967 gacaaaaataaatgatattcattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaacg 45047890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 48212800 - 48212727
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||| ||||| |||||||| | || ||||  ||||| ||| ||||| ||||| |||||||||||||||    
T  48212800 aaaaataaacaatatttattcattccaattgatagagtacatcgatgcaatacaaattcaaagtcgttaaaaac 48212727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 53126293 - 53126264
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  53126293 gacaaaaataaacgatattcattcattcaa 53126264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 33012517 - 33012442
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||||||| ||| |||||||    
T  33012517 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatttaaattcgctaaaaac 33012442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 239 - 317
Target Start/End: Complemental strand, 13113481 - 13113403
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgt 317  Q
    ||||||||||||||||||| ||||||| || || |||| |||||| |||| |||||||||| |||||||||| ||||||    
T  13113481 gacaaaaataaacgatatttattcatttaaattgatagaatacatcgatataatataaattcaaagtcgttataaacgt 13113403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 35333974 - 35333890
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagat 324  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| |||||||||||  |||||||    
T  35333974 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaaaagat 35333890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 36868478 - 36868402
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  || || |||| |||||||||||||| ||| |||||||    
T  36868478 gacaaaaataaacgatattcattcattcaaattgatagagtatatcgatataatataaatttaaattcgctaaaaac 36868402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 16570803 - 16570728
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||||||| ||||||||||||||||| || | ||  | ||||||||||||| ||||||||||||| ||||||    
T  16570803 gacaaaaataaatgatattcattcattcaaattaaaagtgttcattgatacaatacaaatttaaagtcggtaaaaa 16570728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 3527456 - 3527392
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaa 303  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| |||| ||||    
T  3527456 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatctaaa 3527392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 5754748 - 5754676
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||| || |||| |||||| |||| |||| ||||| ||| ||| |||||||    
T  5754748 aaaataaacgatattcattcattcaaattgatagaatacatcgatataatacaaattcaaattcgctaaaaac 5754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 13878660 - 13878736
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  13878660 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaac 13878736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 14018785 - 14018861
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  14018785 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaac 14018861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 16136548 - 16136472
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| |||| |||| |||| |||| ||| |||||||    
T  16136548 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaatctaaattcgctaaaaac 16136472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 25068311 - 25068235
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  25068311 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 25068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 27666006 - 27665942
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaa 303  Q
    ||||||||||||| |||||||||||||| | || |||| ||||||| |||||||| |||||||||    
T  27666006 gacaaaaataaacaatattcattcattctaattgatagaatacatttatacaatacaaatttaaa 27665942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 43696338 - 43696262
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  |||||  |||||||| |||| |||| ||| |||||||    
T  43696338 gacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatctaaattcgctaaaaac 43696262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 17267777 - 17267836
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||||||||||||||| |||||| || ||||  ||||||||||||||| ||||    
T  17267777 gacaaaaataaacgatattcatttattcaaattgatagagtacattgatacaatacaaat 17267836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 20560785 - 20560860
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  20560785 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 20560860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 29543262 - 29543203
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| |||||    
T  29543262 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 29543203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 26491751 - 26491697
Alignment:
Q  238 ggacaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    ||||||||| ||||||||||||||||||||| || |||| |||||| ||||||||    
T  26491751 ggacaaaaacaaacgatattcattcattcaaattgatagaatacatcgatacaat 26491697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 424
Target Start/End: Complemental strand, 4732380 - 4732307
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    |||||||||||||||||| ||||  |||||||  || ||||| ||||||||||||  |||||| ||||||||||    
T  4732380 aaatatgactatattcaagtctccggaatactcatgtctccggatctgcaacgttgacgacgctaaagtcattg 4732307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 7071429 - 7071502
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||| ||||||||||||||||||||| || ||||  ||||||||||||||| ||||  ||| ||| |||||||    
T  7071429 aaaaaaaaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaac 7071502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 4703601 - 4703533
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcg 307  Q
    |||||||||||||||||||||||||| ||| || | ||  ||||| ||||||||| ||||| |||||||    
T  4703601 gacaaaaataaacgatattcattcatccaaattgacagagtacatcgatacaatacaaattcaaagtcg 4703533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 4739799 - 4739723
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||| |||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  4739799 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 4739723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 11798339 - 11798415
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaa-tctgcaacgttaccgacgcgaaagtcattgat 426  Q
    |||||||||||||||||| |||| | ||||||  || ||||||| |||||||||||  |||||| ||||||||||||    
T  11798339 aaatatgactatattcaagtctccataatactcatgtctccgaaatctgcaacgttgacgacgcaaaagtcattgat 11798415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 12890768 - 12890844
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||| |||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  12890768 gacaaaaataaacgatattcattaattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 12890844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 15920323 - 15920263
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||| ||||||||| |||||    
T  15920323 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 15920263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 27096159 - 27096099
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||||||||||||||||||||| || || |  ||||| ||||||||| |||||    
T  27096159 gacaaaaataaacgatattcattcattcaaattgatggagtacatagatacaatacaaatt 27096099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 34962888 - 34962960
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    |||||||||||||||||||||| ||||| ||  || || || ||||||||||||  |||||| ||||||||||    
T  34962888 aatatgactatattcaaatctccagaatcctcatgtcttcggatctgcaacgttgacgacgccaaagtcattg 34962960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 38384117 - 38384193
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || |||    |||| ||||||||| ||||| ||| ||| |||||||    
T  38384117 gacaaaaataaacgatattcattcattcaaattgataaagcacatcgatacaatacaaattcaaattcgctaaaaac 38384193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 43473796 - 43473872
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||| |||||||||||||||||||||| |  |||  ||||||||||| |||||||||  ||| ||| |||||||    
T  43473796 gacaaaagtaaacgatattcattcattcaaatcgatataatacattgatataatataaatccaaattcgctaaaaac 43473872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 44942752 - 44942692
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaa 303  Q
    |||||||||||||||||||||||||| || ||||  ||||| ||||||||| |||| ||||    
T  44942752 aaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatctaaa 44942692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 11798189 - 11798264
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||| ||||||||||||||||||||| || || ||||  ||||| ||||||||  ||||| ||||||| ||||||    
T  11798189 gacaacaataaacgatattcattcatttaaattgatagagtacatcgatacaattcaaattcaaagtcgctaaaaa 11798264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 17767377 - 17767452
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    |||||||||||||||||| |||| | ||||||  || ||||| ||||||||||||  ||||||  |||||||||||    
T  17767377 aaatatgactatattcaagtctcaataatactcatgtctccggatctgcaacgttgacgacgcagaagtcattgat 17767452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 18089064 - 18089139
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || |||   ||||| ||||||||| ||||  ||| ||| |||||||    
T  18089064 acaaaaataaacgatattcattcattcaaattgatatagtacatcgatacaatacaaatccaaattcgctaaaaac 18089139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 20570427 - 20570352
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||| |||||||||||||||| |||| ||||| |||  |||||||||||||||  ||||| ||| ||| |||||||    
T  20570427 acaacaataaacgatattcatccatttaagttgataaaatacattgatacaattcaaattcaaaatcgctaaaaac 20570352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 28230749 - 28230824
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||| ||||||||| ||  |||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  28230749 acaaaaataaacgatattcgttcattcaaattgttagagtacatcgatacaatacaaattcaaattcgctaaaaac 28230824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 34416414 - 34416473
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||| | || ||||  ||||| ||||||||| ||||    
T  34416414 gacaaaaataaacgatattcattcattcgaattgatagagtacatcgatacaatacaaat 34416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 40038975 - 40039050
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||| ||||||||||  || |||   ||||| ||||||||| ||||| |||||| ||||||||    
T  40038975 acaaaaataaacgatatccattcattcatattgataaagtacatcgatacaataaaaattcaaagtcattaaaaac 40039050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 352 - 426
Target Start/End: Complemental strand, 5754591 - 5754517
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||||||||  ||||  |||||||| || ||||| ||||||||||||  |||| | ||||||||||||    
T  5754591 aatatgactatattcatgtctccggaatacttatgtctccggatctgcaacgttgacgacaccaaagtcattgat 5754517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 17792920 - 17792854
Alignment:
Q  246 ataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaa 312  Q
    |||||||||||||||| |||||| || |||   ||||| ||||||||| ||||| ||||||||||||    
T  17792920 ataaacgatattcattaattcaaattgataaagtacatcgatacaatacaaattcaaagtcgttaaa 17792854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 28261558 - 28261632
Alignment:
Q  241 caaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||| |||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  28261558 caaaaataaacaatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgataaaaac 28261632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 351 - 405
Target Start/End: Complemental strand, 31811881 - 31811827
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgtt 405  Q
    |||||||||||||||||| ||||| |||||||  || ||| ||||||||||||||    
T  31811881 aaatatgactatattcaagtctctggaatactcatgtctctgaatctgcaacgtt 31811827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 424
Target Start/End: Original strand, 9689796 - 9689869
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    |||||||||||||||||  ||||| |||||||| || ||||| |||||||| | |  |||||| ||||||||||    
T  9689796 aaatatgactatattcatgtctctggaatacttatgtctccggatctgcaatgctgacgacgccaaagtcattg 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 12705153 - 12705080
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||| ||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  12705153 aaaaataaaggatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 12705080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 16136387 - 16136334
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgtt 405  Q
    |||||||||||||||| |||||  |||||||  || ||||||||||||||||||    
T  16136387 aatatgactatattcatatctccggaatactcatgtctccgaatctgcaacgtt 16136334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 33055809 - 33055838
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  33055809 gacaaaaataaacgatattcattcattcaa 33055838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 426
Target Start/End: Complemental strand, 37883955 - 37883882
Alignment:
Q  353 atatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||||| || | |||||||||||  || ||||| ||||||||||||  |||| | ||||||||||||    
T  37883955 atatgactatatttaagtatctagaatactcatgtctccgtatctgcaacgttgacgactccaaagtcattgat 37883882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 25032757 - 25032830
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||| ||||||| |||||||    
T  25032757 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaagtcgctaaaaac 25032830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 12872076 - 12872017
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||||||||||||| ||||    
T  12872076 gacaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaat 12872017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 42491338 - 42491264
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||||||| |||||||||||||||| || ||||  ||||| ||||||||||||||| ||| ||| ||||||    
T  42491338 acaaaaataaacaatattcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgataaaaa 42491264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 3233238 - 3233165
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||| || ||||  ||||| ||||||||||||||  ||| ||| |||||||    
T  3233238 aaaaataaacgatattcattcattcaaattgatagattacatcgatacaatataaatccaaattcgctaaaaac 3233165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 16141081 - 16141005
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||| ||| || ||||  ||||| ||||||||| ||||  ||| |||||||||||    
T  16141081 gacaaaaataaacgatattcattcatccaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaac 16141005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 29205738 - 29205662
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  29205738 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaataaaaatccaaattcgctaaaaac 29205662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 4882028 - 4882087
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  4882028 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 4882087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 10188542 - 10188617
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||  |||||||||||||||| || ||||  ||||||| ||||||| ||||| ||||||| |||||||    
T  10188542 acaaaaataaataatattcattcattcaaattaatagagtacattggtacaatacaaattcaaagtcgctaaaaac 10188617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 10305032 - 10304973
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||| ||||||||||||||||| || ||||  ||||| |||||||||||||||    
T  10305032 acaaaaataaaggatattcattcattcaaattgatagattacatcgatacaatataaatt 10304973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 29938662 - 29938595
Alignment:
Q  247 taaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||| ||||||||||||| ||||||||||  ||||| ||||||||| ||||| ||||||| ||||||    
T  29938662 taaacaatattcattcatttaagtttatagagtacatcgatacaatacaaattcaaagtcgctaaaaa 29938595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 30678708 - 30678633
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||  |||| || |||| ||| || ||||||||| ||||| ||||| |||||||||    
T  30678708 acaaaaataaacgatattcattccatcaaattgatagaatatatcgatacaatacaaattcaaagttgttaaaaac 30678633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 44517618 - 44517559
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  44517618 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 44517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 33486690 - 33486772
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagat 324  Q
    ||||| ||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| |||||||||||  |||||||    
T  33486690 aaaaaaaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaaaagat 33486772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 13969305 - 13969358
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    |||||||||||| ||||||||||||||||| || |||| |||||| ||||||||    
T  13969305 gacaaaaataaatgatattcattcattcaaattgatagaatacatcgatacaat 13969358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 11121424 - 11121372
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    ||||||||||| ||||||||||||||||| || |||| |||||| ||||||||    
T  11121424 acaaaaataaatgatattcattcattcaaattgatagaatacatcgatacaat 11121372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 15390903 - 15390979
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||| |||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  15390903 gacaaaaataaacgatatttattcattcaacttgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 15390979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 25689507 - 25689579
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||| ||||||||| |||||||||| || ||||  || |||||||||||| ||||| ||||||| ||||||    
T  25689507 aaaaatgaacgatatttattcattcaaattgatagagtatattgatacaatacaaattcaaagtcgctaaaaa 25689579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 28677790 - 28677866
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||| |||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  28677790 gacaaaaataaacgatattcatttattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 28677866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 32784549 - 32784473
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||| ||||||||| |||||| || ||||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  32784549 gacaaaaataaactatattcattaattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaac 32784473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 42276664 - 42276592
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    ||||||||||||||||  ||||  |||||||  || ||||||||||||||||||  |||||| ||||||||||    
T  42276664 aatatgactatattcatgtctccggaatactcatgtctccgaatctgcaacgttgacgacgccaaagtcattg 42276592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 11877114 - 11877189
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||| ||||||||| ||| |||| |||| | ||||||| | | ||| ||||| |||||||||    
T  11877114 acaaaaataaacgatattaattcattcatgttgatagaatacgtcgatacaacacatattcaaagttgttaaaaac 11877189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 37822015 - 37822090
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||| |||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  37822015 acaaaaataaacgatattcattcactcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 37822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 47551399 - 47551324
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    |||||||||||||||||| |||| ||||||||  ||  |||| ||||||||||||  |||||  ||||||||||||    
T  47551399 aaatatgactatattcaagtctccagaatactcatgtttccggatctgcaacgttgacgacgtcaaagtcattgat 47551324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 10599331 - 10599259
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||| || ||||||| |||||||||| ||||| |  ||||| ||||||||| ||||| |||||||||||||||    
T  10599331 aaaaagaagcgatatttattcattcaaatttattgagtacatcgatacaata-aaattcaaagtcgttaaaaac 10599259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 10627475 - 10627446
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  10627475 gacaaaaataaacgatattcattcattcaa 10627446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 11546025 - 11546086
Alignment:
Q  153 tgaaaataattagattttgattaaaattatacgtatcaatgtttgcggtttcaaattgtaac 214  Q
    ||||| || ||||||||||||||||||||||||||| ||| |||    ||||||||||||||    
T  11546025 tgaaattagttagattttgattaaaattatacgtataaatatttttaatttcaaattgtaac 11546086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 13152897 - 13152868
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  13152897 gacaaaaataaacgatattcattcattcaa 13152868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 13488190 - 13488275
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagataaa 327  Q
    ||||||||  ||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||  ||||||||||    
T  13488190 aaaaataattgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaagataaa 13488275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 17348042 - 17347981
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaa 303  Q
    |||||||||||||||||| ||||| || || ||||  ||||| |||| ||||||||||||||    
T  17348042 aaaaataaacgatattcactcatttaaattgatagagtacatcgatataatataaatttaaa 17347981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 424
Target Start/End: Complemental strand, 18343922 - 18343849
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    |||||||||||||||||| ||||  |||| ||  || ||||| ||||||||||||  |||||| ||||||||||    
T  18343922 aaatatgactatattcaagtctccggaatcctcatgtctccggatctgcaacgttgacgacgccaaagtcattg 18343849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 26200029 - 26200000
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  26200029 gacaaaaataaacgatattcattcattcaa 26200000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 26771552 - 26771495
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||| ||||||||||||||||| || ||||  ||||| ||||||||| |||||    
T  26771552 aaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 26771495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 46589597 - 46589544
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||| ||||||||    
T  46589597 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaat 46589544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 30813527 - 30813451
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  30813527 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaac 30813451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 15589776 - 15589835
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||||||||    
T  15589776 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaat 15589835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 19402504 - 19402579
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| |||||||||||    
T  19402504 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaac 19402579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 31680890 - 31680816
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||| ||||| ||||| ||||||||||||| ||||  || |||||||||||| |||| |||||||||||||||    
T  31680890 acaaaagtaaacaatatttattcattcaagttgatagagtatattgatacaatacaaatctaaagtcgttaaaaa 31680816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 5527301 - 5527374
Alignment:
Q  241 caaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||||| ||||||||||||||| | || ||||  |||||  |||||||||||||| ||||||||||||||    
T  5527301 caaaaataaatgatattcattcattcgaattgatagagtacatcaatacaatataaattcaaagtcgttaaaaa 5527374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 2304489 - 2304577
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagataaa 327  Q
    ||||||| ||||||||||||||||||| || || ||||  ||||| ||| ||||| ||||||||| ||| |||||||  ||||||||||    
T  2304489 gacaaaagtaaacgatattcattcatttaaattgatagagtacatcgatgcaatacaaatttaaattcgctaaaaacaaaaaagataaa 2304577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 2488592 - 2488516
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||| |||||||||| || ||||  ||||| ||||||||| ||||  |||||| ||||||||    
T  2488592 gacaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatccaaagtcattaaaaac 2488516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 5545129 - 5545069
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||| ||||||||||||||||| || ||||  |||||||||||||| ||||||    
T  5545129 gacaaaaataaatgatattcattcattcaaattgatagagtacattgatacaatgtaaatt 5545069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 23654719 - 23654643
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  23654719 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 23654643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 12653970 - 12654045
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| || |  ||||||| |||||||    
T  12653970 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaattccaaagtcgctaaaaac 12654045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 12654120 - 12654195
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    |||||||||||||||||| ||||  |||||||  || ||||||||||||||||||   ||||| ||||||||||||    
T  12654120 aaatatgactatattcaagtctccggaatactcatgtctccgaatctgcaacgttgatgacgccaaagtcattgat 12654195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 4660898 - 4660844
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaata 293  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| |||||||||    
T  4660898 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaata 4660844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 4394079 - 4394007
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    ||||||||||||||||| ||||  |||||||  || ||||| ||||||||||||  |||||| ||||||||||    
T  4394079 aatatgactatattcaagtctcatgaatactcatgtctccggatctgcaacgttgacgacgccaaagtcattg 4394007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 5146396 - 5146320
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| |||| |||| ||||  ||| ||| |||||||    
T  5146396 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaac 5146320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 20496641 - 20496589
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    ||||||||||| ||||||||||||||||| || ||||  ||||||||||||||    
T  20496641 acaaaaataaatgatattcattcattcaaattgatagcgtacattgatacaat 20496589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 31705635 - 31705575
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||||||||||||||||||| || || ||||  ||||| ||||||||| |||||    
T  31705635 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatt 31705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 316
Target Start/End: Original strand, 31936285 - 31936361
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacg 316  Q
    ||||||||||||||||||| ||||||||| || ||||  ||||| ||||||||| | || |||| ||| ||||||||    
T  31936285 acaaaaataaacgatattcgttcattcaaattgatagagtacatagatacaatacatatctaaattcgctaaaaacg 31936361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 35219564 - 35219640
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| ||  |||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  35219564 gacaaaaataaacgatattcattcattcaaattggtagagtacatcgatacaatacaaatccaaattcgctaaaaac 35219640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 1106514 - 1106573
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||  || ||||  ||||| ||||||||| ||||    
T  1106514 gacaaaaataaacgatattcattcattcagattgatagagtacatcgatacaatacaaat 1106573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 4394240 - 4394181
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||| | |||||||||||||||||| || ||||  ||||||||||||||| ||||    
T  4394240 gacaaaaatgagcgatattcattcattcaaattgatagagtacattgatacaatacaaat 4394181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 12481030 - 12481089
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || |||   ||||| ||||||||| ||||    
T  12481030 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaat 12481089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 8693323 - 8693381
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||| |||||||||| || ||||  ||||| ||||||||| ||||    
T  8693323 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaat 8693381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 352 - 426
Target Start/End: Original strand, 13871438 - 13871512
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||||||||  ||||  |||||||  || ||||| ||||||||||||  |||||| ||||||||||||    
T  13871438 aatatgactatattcatgtctccggaatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgat 13871512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 2304650 - 2304703
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgtt 405  Q
    ||||||||||||||||| | |||||||||||  || ||||| ||||||||||||    
T  2304650 aatatgactatattcaagtatctagaatactcatgtctccggatctgcaacgtt 2304703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 6419533 - 6419606
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||| |||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  6419533 aaaagtaaacgatattcattcattcaaattgatagactacatcgatacaatacaaatccaaattcgctaaaaac 6419606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 14731070 - 14731001
Alignment:
Q  244 aaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaa 313  Q
    ||||||| ||||||||||||||||| || |||  |||||| ||||||||| | ||| ||||||| |||||    
T  14731070 aaataaatgatattcattcattcaaattgataacatacatcgatacaatacatattcaaagtcgctaaaa 14731001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 21507505 - 21507534
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaa 268  Q
    ||||||||||||||||||||||||||||||    
T  21507505 gacaaaaataaacgatattcattcattcaa 21507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 8517111 - 8517186
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||||||||||||| ||||  ||| ||| |||||||    
T  8517111 acaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaac 8517186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 23964116 - 23964058
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaattt 300  Q
    ||||||||||||||||||||||||||| || | |  |||||||||||||||||||||||    
T  23964116 aaaaataaacgatattcattcattcaaattgagataatacattgatacaatataaattt 23964058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 7060781 - 7060708
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||| || ||||  ||||||||||||||| ||||  ||| ||| |||||||    
T  7060781 aaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaac 7060708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 20887408 - 20887493
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaacgtaaaagat 324  Q
    ||||||||||||||||||||||||||| || || ||||  ||||| ||||||||||||||  ||| ||| |||||||  |||||||    
T  20887408 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaacaaaaaagat 20887493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 50080829 - 50080902
Alignment:
Q  152 atgaaaataattagattttgattaaaattatacgtatcaatgtttgcggtttcaaattgtaacaacatgcttat 225  Q
    |||||| || |||||||||||||||||||||| ||||  | ||||| | ||||||||||||||| |||||||||    
T  50080829 atgaaattagttagattttgattaaaattatatgtatggacgtttgtgatttcaaattgtaacatcatgcttat 50080902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 7083475 - 7083547
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    |||||||||||||||||||||| |||| || ||||  ||||| ||||||||||||||| ||| ||| ||||||    
T  7083475 aaaaataaacgatattcattcactcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaa 7083547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 24611449 - 24611525
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||| |||| ||||||||||||||||| || ||||  ||||||||||||||| |||| |||| ||| |||||||    
T  24611449 gacaaaagtaaatgatattcattcattcaaattgatagagtacattgatacaatacaaatctaaattcgctaaaaac 24611525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 27091178 - 27091102
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||| |||||||||| || ||||  ||||| ||||||||| ||||  |||||| ||||||||    
T  27091178 gacaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatccaaagtcattaaaaac 27091102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 29266555 - 29266615
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||| |||||||||||||||||||||| || ||||  ||||||||||||||| |||||    
T  29266555 gacaaaagtaaacgatattcattcattcaaattgatagagtacattgatacaatacaaatt 29266615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 42198023 - 42197963
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| |||||    
T  42198023 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 42197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 393926 - 394001
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || |||   ||||| ||||||||| ||||  ||| |||||||||||    
T  393926 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgttaaaaac 394001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 477673 - 477748
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| |  ||||  |||||||||||| || ||||| ||| ||| |||||||    
T  477673 acaaaaataaacgatattcattcattcaaatcgatagagtacattgatacagtacaaattcaaattcgctaaaaac 477748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 13966013 - 13965954
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  13966013 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 13965954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 45350722 - 45350797
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  45350722 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 45350797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 45360201 - 45360276
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  45360201 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 45360276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 24826108 - 24826034
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaa 314  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| |||| |||| ||||  ||| ||||||||||    
T  24826108 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatagaatacaaatccaaattcgttaaaaa 24826034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 14346880 - 14346827
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    |||||||||||||||||||||||||||||| || ||||  ||||| ||||||||    
T  14346880 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaat 14346827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 24568368 - 24568442
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||  ||||||||||||||||| || ||||  ||||| ||||||||||||||| ||| ||| |||||||    
T  24568368 gacaaaaataa--gatattcattcattcaaattgatagattacatcgatacaatataaattcaaattcgctaaaaac 24568442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 1621292 - 1621336
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacat 283  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||    
T  1621292 gacaaaaataaaggatattcattcattcaaatttatagaatacat 1621336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 6882414 - 6882338
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||| |||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  6882414 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 6882338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 6912150 - 6912074
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||| ||||||||||||||| || ||||  |||||  |||||||| ||||| ||| ||| |||||||    
T  6912150 gacaaaaataaacgttattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaac 6912074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 18502493 - 18502569
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||||||||||||||||||||||| || || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  18502493 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac 18502569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 30202347 - 30202275
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    ||||||||||||||||| |||| |||||| |  || ||||| ||||||||||||  |||||| ||||||||||    
T  30202347 aatatgactatattcaagtctccagaataatcatgtctccggatctgcaacgttgacgacgccaaagtcattg 30202275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 43244032 - 43244108
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||||||||| || ||||  ||||  ||||||||| ||||  ||| ||| |||||||    
T  43244032 gacaaaaataaacgatattcattcattcaaattgatagagtacaccgatacaatacaaatccaaattcgctaaaaac 43244108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 5814650 - 5814575
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    |||||||||||||||||| |||| ||||||||  || ||| | ||||||||||||   ||||| ||||||||||||    
T  5814650 aaatatgactatattcaagtctccagaatactcatgtctctggatctgcaacgttgatgacgccaaagtcattgat 5814575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 8712977 - 8712914
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaa 303  Q
    |||||||||||||||||| |||||||||| || ||||  ||||| ||||||||| |||| ||||    
T  8712977 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatctaaa 8712914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 24100603 - 24100544
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  24100603 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaat 24100544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 25658630 - 25658571
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||| |||||||||||||||| || | |  |||||||||||||||| |||||    
T  25658630 acaaaaataaacaatattcattcattcaaattgacaaaatacattgatacaatacaaatt 25658571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 33288811 - 33288862
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaata 293  Q
    ||||||||||||||||||||||||||| || || |||||||  |||||||||    
T  33288811 aaaaataaacgatattcattcattcaaattaattggatacaccgatacaata 33288862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 41837783 - 41837708
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||| | |||||||||| || ||||  |||||  ||||| || ||||| |||||||||||||||    
T  41837783 acaaaaataaacgataattattcattcaaattgatagagtacatcaatacactacaaattcaaagtcgttaaaaac 41837708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 55600198 - 55600261
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaa 303  Q
    ||||||||||||||||||||||||||||| || ||||  | ||| ||||||||| |||| ||||    
T  55600198 acaaaaataaacgatattcattcattcaaattgatagagtgcatcgatacaatacaaatctaaa 55600261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 7084411 - 7084361
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgataca 290  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||    
T  7084411 acaaaaataaacgatattcattcattcaaattgatagagtacatcgataca 7084361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 44756692 - 44756766
Alignment:
Q  241 caaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||||||||||||||||||||| ||| || ||||  ||||| | ||||||| ||||| ||| ||| |||||||    
T  44756692 caaaaataaacgatattcattcatccaaattgatagagtacatcggtacaatagaaattcaaattcgctaaaaac 44756766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 56172282 - 56172216
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtc 306  Q
    ||||||||||| |||||||||  |||||| || ||||  ||||||||||||||| |||| |||||||    
T  56172282 acaaaaataaatgatattcatgtattcaaattgatagactacattgatacaatacaaatataaagtc 56172216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 56236482 - 56236536
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaata 293  Q
    |||||||||||| ||||||||||||||||| || ||||  ||||| |||||||||    
T  56236482 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaata 56236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 12520068 - 12520015
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    |||||||||||| |||||||||| |||||| |||||||  ||||| ||||||||    
T  12520068 gacaaaaataaatgatattcatttattcaaatttatagagtacatcgatacaat 12520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 13169112 - 13169177
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagt 305  Q
    |||||||||||||||||||| | |||||| || |||   |||||  ||||||||||||||||||||    
T  13169112 acaaaaataaacgatattcaataattcaaattgataaagtacatcaatacaatataaatttaaagt 13169177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 426
Target Start/End: Complemental strand, 14346733 - 14346660
Alignment:
Q  353 atatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||||| || ||||||||||||   || ||||| ||||||||||||  |||| | ||||||||||||    
T  14346733 atatgactatatttaagtctctagaatacacatggctccggatctgcaacgttgacgactccaaagtcattgat 14346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 31522411 - 31522362
Alignment:
Q  244 aaataaacgatattcattcattcaagtttataggatacattgatacaata 293  Q
    ||||||||||||||||||||||||| || ||||  ||||| |||||||||    
T  31522411 aaataaacgatattcattcattcaaattgatagagtacatcgatacaata 31522362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 424
Target Start/End: Original strand, 38943959 - 38944032
Alignment:
Q  351 aaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattg 424  Q
    |||||||||||||||||  ||||  ||||||| ||| ||||| ||||||||||||  | |||| ||||||||||    
T  38943959 aaatatgactatattcatgtctccggaatactcgtgtctccggatctgcaacgttgacaacgccaaagtcattg 38944032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 50274378 - 50274435
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    |||||||||||||||| ||||||| || || |||   |||||||||||||||||||||    
T  50274378 aaaaataaacgatatttattcatttaaattaataaagtacattgatacaatataaatt 50274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 352 - 426
Target Start/End: Original strand, 6942 - 7016
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||||||||  |||| ||||||||  || ||||| ||||||||||||| |||||| ||||||||||||    
T  6942 aatatgactatattcatgtctcaagaatactcatgtctccggatctgcaacgttaacgacgccaaagtcattgat 7016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 6780 - 6857
Alignment:
Q  239 gacaaaaataaacgatattcattca-ttcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    |||||| |||||||||||||||||| ||||| || ||||  ||||| ||||||||| ||||| ||| ||| |||||||    
T  6780 gacaaatataaacgatattcattcatttcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaac 6857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 35546 - 35486
Alignment:
Q  238 ggacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaat 298  Q
    ||||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  35546 ggacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 35486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 403900 - 403959
Alignment:
Q  240 acaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||||||||||||||||||||| || ||||  ||||| ||||||||| |||||    
T  403900 acaaaaataaacgatattcattcattcaaattaatagagtacatcgatacaatacaaatt 403959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 352 - 426
Target Start/End: Original strand, 2254 - 2328
Alignment:
Q  352 aatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgttaccgacgcgaaagtcattgat 426  Q
    ||||||||||||||||| |||| ||||||||  || ||||| ||||||||| ||  |||||| ||||||||||||    
T  2254 aatatgactatattcaagtctccagaatactcatgtctccggatctgcaacattgacgacgccaaagtcattgat 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 2102 - 2159
Alignment:
Q  242 aaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatt 299  Q
    ||||||||||||||||||||||||||| || |||   ||||| ||||||||| |||||    
T  2102 aaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatt 2159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 5191 - 5252
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaattt 300  Q
    |||||||||||| ||||||||||||||||| |||||||  ||||| |||| |||| ||||||    
T  5191 gacaaaaataaatgatattcattcattcaaatttatagagtacatcgatataatacaaattt 5252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 3718 - 3794
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaatataaatttaaagtcgttaaaaac 315  Q
    ||||||| |||||||||||||||||||||| || ||||  ||||| ||||||||| ||||  ||| ||| |||||||    
T  3718 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcggtaaaaac 3794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 21281 - 21227
Alignment:
Q  350 aaaatatgactatattcaaatctctagaatacttgtgcctccgaatctgcaacgt 404  Q
    ||||||||||||||||||| |||| ||||||||  || ||||||||| |||||||    
T  21281 aaaatatgactatattcaagtctccagaatactcatgtctccgaatcggcaacgt 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 843 - 896
Alignment:
Q  239 gacaaaaataaacgatattcattcattcaagtttataggatacattgatacaat 292  Q
    |||||||||||| |||||||||| |||||| |||||||  ||||| ||||||||    
T  843 gacaaaaataaatgatattcatttattcaaatttatagagtacatcgatacaat 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 36969 - 36912
Alignment:
Q  243 aaaataaacgatattcattcattcaagtttataggatacattgatacaatataaattt 300  Q
    |||||||| ||||||||||||||||| || ||||  |||||||||| ||| |||||||    
T  36969 aaaataaaagatattcattcattcaaattgatagagtacattgatataatgtaaattt 36912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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