View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17594_low_1 (Length: 2066)

Name: NF17594_low_1
Description: NF17594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17594_low_1
NF17594_low_1
[»] chr6 (54 HSPs)
chr6 (61-2048)||(22702948-22704935)
chr6 (61-620)||(21401709-21402254)
chr6 (61-627)||(29490812-29491385)
chr6 (290-620)||(21396653-21396983)
chr6 (219-620)||(34375873-34376270)
chr6 (219-627)||(24191126-24191531)
chr6 (219-627)||(24192223-24192628)
chr6 (231-609)||(34142041-34142418)
chr6 (231-609)||(34154657-34155034)
chr6 (219-609)||(31981528-31981904)
chr6 (219-609)||(2817901-2818277)
chr6 (61-336)||(22697772-22698044)
chr6 (408-620)||(22698172-22698386)
chr6 (1540-1999)||(20736883-20737341)
chr6 (61-208)||(2817401-2817548)
chr6 (61-208)||(34142781-34142928)
chr6 (61-208)||(34155397-34155544)
chr6 (471-584)||(19478138-19478251)
chr6 (474-584)||(13605087-13605197)
chr6 (61-208)||(6727777-6727924)
chr6 (61-208)||(34376464-34376611)
chr6 (61-208)||(24190654-24190802)
chr6 (61-208)||(31983475-31983622)
chr6 (347-467)||(6728285-6728394)
chr6 (473-585)||(10642698-10642811)
chr6 (481-584)||(3901902-3902006)
chr6 (477-574)||(12182998-12183096)
chr6 (478-574)||(5600971-5601068)
chr6 (541-614)||(6728397-6728472)
chr6 (474-584)||(17281558-17281669)
chr6 (471-584)||(31476007-31476120)
chr6 (471-584)||(31495833-31495946)
chr6 (471-584)||(31501219-31501332)
chr6 (11-57)||(22699738-22699784)
chr6 (471-584)||(29325525-29325639)
chr6 (479-574)||(11570749-11570845)
chr6 (471-574)||(31515723-31515826)
chr6 (481-584)||(5740792-5740896)
chr6 (479-574)||(12406353-12406449)
chr6 (479-554)||(17964559-17964635)
chr6 (479-574)||(24589164-24589260)
chr6 (479-574)||(33687603-33687699)
chr6 (219-272)||(6728193-6728246)
chr6 (479-574)||(2700106-2700202)
chr6 (479-574)||(6407860-6407956)
chr6 (479-574)||(12688970-12689066)
chr6 (531-574)||(11428042-11428085)
chr6 (478-574)||(6112972-6113068)
chr6 (479-574)||(8747781-8747877)
chr6 (479-574)||(13736678-13736774)
chr6 (479-574)||(21309030-21309126)
chr6 (479-553)||(16836156-16836231)
chr6 (544-582)||(12662673-12662711)
chr6 (539-584)||(11956762-11956807)
[»] chr4 (75 HSPs)
chr4 (61-627)||(8984987-8985553)
chr4 (61-627)||(13700457-13701023)
chr4 (61-627)||(8979867-8980433)
chr4 (61-627)||(21299415-21299981)
chr4 (61-620)||(21304535-21305094)
chr4 (61-627)||(54991433-54991989)
chr4 (219-627)||(41393192-41393584)
chr4 (209-627)||(51019117-51019521)
chr4 (219-614)||(53797589-53797970)
chr4 (61-355)||(54990392-54990686)
chr4 (219-625)||(9763771-9764167)
chr4 (219-609)||(13710634-13711010)
chr4 (219-609)||(13695124-13695503)
chr4 (219-609)||(47046060-47046438)
chr4 (87-336)||(39999363-39999609)
chr4 (87-336)||(40004321-40004567)
chr4 (87-336)||(54343497-54343743)
chr4 (87-336)||(54348651-54348897)
chr4 (87-291)||(36359664-36359868)
chr4 (87-336)||(36354436-36354682)
chr4 (408-627)||(36359239-36359460)
chr4 (408-620)||(54348309-54348523)
chr4 (407-627)||(36354121-36354343)
chr4 (408-620)||(40003979-40004193)
chr4 (408-620)||(39999021-39999235)
chr4 (408-620)||(54343155-54343369)
chr4 (87-208)||(53798329-53798450)
chr4 (61-208)||(41393858-41394005)
chr4 (471-582)||(653035-653146)
chr4 (87-208)||(51018732-51018853)
chr4 (61-208)||(9763273-9763420)
chr4 (61-208)||(13695757-13695904)
chr4 (61-208)||(13711370-13711517)
chr4 (471-584)||(10120801-10120914)
chr4 (635-761)||(12889052-12889179)
chr4 (61-208)||(4207042-4207188)
chr4 (88-208)||(47045647-47045767)
chr4 (471-572)||(8083019-8083121)
chr4 (474-583)||(24490022-24490132)
chr4 (479-574)||(37259877-37259973)
chr4 (479-574)||(31269033-31269129)
chr4 (477-585)||(34644546-34644655)
chr4 (479-574)||(5271419-5271515)
chr4 (479-574)||(13521992-13522088)
chr4 (479-574)||(31273520-31273616)
chr4 (479-574)||(33463356-33463452)
chr4 (479-574)||(37264564-37264660)
chr4 (11-57)||(13699067-13699113)
chr4 (11-57)||(21301325-21301371)
chr4 (11-57)||(36357870-36357916)
chr4 (11-57)||(40002798-40002844)
chr4 (11-57)||(54346932-54346978)
chr4 (500-584)||(39319621-39319706)
chr4 (479-574)||(31765885-31765981)
chr4 (454-583)||(5928194-5928324)
chr4 (11-57)||(8981777-8981823)
chr4 (479-584)||(10318779-10318885)
chr4 (11-57)||(13702945-13702991)
chr4 (473-585)||(17359525-17359633)
chr4 (479-574)||(8693710-8693806)
chr4 (479-574)||(16421028-16421124)
chr4 (477-568)||(30564412-30564504)
chr4 (479-572)||(31729387-31729481)
chr4 (417-462)||(54990687-54990732)
chr4 (479-574)||(2819843-2819939)
chr4 (479-574)||(12823895-12823991)
chr4 (507-582)||(34560489-34560565)
chr4 (479-574)||(55251719-55251814)
chr4 (480-574)||(42758756-42758851)
chr4 (473-574)||(3998051-3998152)
chr4 (479-574)||(33468973-33469069)
chr4 (818-874)||(54221327-54221382)
chr4 (479-572)||(19101978-19102072)
chr4 (478-563)||(31298384-31298469)
chr4 (479-563)||(8030476-8030561)
[»] chr5 (63 HSPs)
chr5 (61-627)||(17510005-17510571)
chr5 (61-620)||(42019527-42020086)
chr5 (87-627)||(17504900-17505440)
chr5 (87-627)||(41858541-41859071)
chr5 (87-497)||(43579737-43580147)
chr5 (280-627)||(41853496-41853842)
chr5 (219-628)||(36253772-36254177)
chr5 (219-627)||(1413806-1414200)
chr5 (61-361)||(42024566-42024866)
chr5 (219-620)||(26709056-26709444)
chr5 (219-620)||(26978790-26979178)
chr5 (219-609)||(24776563-24776945)
chr5 (219-609)||(24771108-24771487)
chr5 (87-197)||(41853846-41853956)
chr5 (88-208)||(1413100-1413220)
chr5 (471-582)||(13582682-13582793)
chr5 (471-582)||(14374127-14374238)
chr5 (471-582)||(24435861-24435972)
chr5 (87-208)||(36254517-36254638)
chr5 (471-579)||(7805066-7805174)
chr5 (61-208)||(24770605-24770752)
chr5 (92-208)||(26709688-26709804)
chr5 (92-208)||(26979422-26979538)
chr5 (627-762)||(36607037-36607173)
chr5 (118-208)||(24776116-24776206)
chr5 (479-585)||(28857850-28857958)
chr5 (479-574)||(37248795-37248891)
chr5 (479-574)||(26667271-26667367)
chr5 (479-574)||(26938868-26938964)
chr5 (479-574)||(29167973-29168069)
chr5 (416-574)||(36428708-36428867)
chr5 (479-574)||(556694-556790)
chr5 (479-574)||(561466-561562)
chr5 (479-574)||(7451757-7451853)
chr5 (479-574)||(12103024-12103120)
chr5 (479-574)||(36423636-36423732)
chr5 (479-574)||(36937511-36937607)
chr5 (479-574)||(36942265-36942361)
chr5 (11-57)||(17508630-17508676)
chr5 (473-582)||(21323960-21324069)
chr5 (473-582)||(31731535-31731644)
chr5 (479-592)||(31986708-31986822)
chr5 (11-57)||(41857149-41857195)
chr5 (11-57)||(42023542-42023588)
chr5 (687-783)||(27631376-27631473)
chr5 (475-574)||(13301482-13301581)
chr5 (479-574)||(32461549-32461645)
chr5 (479-574)||(39518409-39518505)
chr5 (479-574)||(39523048-39523144)
chr5 (479-574)||(42001433-42001529)
chr5 (11-57)||(24772849-24772895)
chr5 (479-574)||(6514601-6514697)
chr5 (479-574)||(10759820-10759915)
chr5 (479-574)||(12045139-12045235)
chr5 (479-574)||(12501899-12501995)
chr5 (479-574)||(41996664-41996760)
chr5 (479-574)||(3665931-3666027)
chr5 (479-574)||(12041932-12042028)
chr5 (479-574)||(12102831-12102927)
chr5 (481-574)||(40147894-40147988)
chr5 (479-574)||(6155419-6155515)
chr5 (483-574)||(25689296-25689388)
chr5 (533-574)||(20181118-20181159)
[»] scaffold0517 (2 HSPs)
scaffold0517 (87-627)||(3510-4050)
scaffold0517 (11-57)||(2120-2166)
[»] chr1 (53 HSPs)
chr1 (87-629)||(37409145-37409687)
chr1 (87-627)||(37404026-37404564)
chr1 (87-627)||(27716390-27716930)
chr1 (87-594)||(11250731-11251228)
chr1 (61-559)||(27711319-27711836)
chr1 (219-614)||(5730065-5730446)
chr1 (219-609)||(3584566-3584942)
chr1 (334-627)||(11387666-11387978)
chr1 (209-627)||(48246427-48246823)
chr1 (87-290)||(34317840-34318043)
chr1 (87-336)||(36684270-36684516)
chr1 (321-614)||(5724939-5725221)
chr1 (408-620)||(36684644-36684858)
chr1 (415-626)||(34318160-34318373)
chr1 (61-208)||(5725365-5725512)
chr1 (61-208)||(3585301-3585448)
chr1 (62-208)||(5730771-5730917)
chr1 (471-582)||(10106095-10106206)
chr1 (471-584)||(39747157-39747270)
chr1 (87-208)||(48245998-48246119)
chr1 (471-582)||(13890805-13890916)
chr1 (471-584)||(38734265-38734378)
chr1 (473-584)||(26651160-26651271)
chr1 (471-584)||(5602417-5602530)
chr1 (471-584)||(14582089-14582202)
chr1 (87-146)||(50959010-50959069)
chr1 (479-574)||(10135455-10135551)
chr1 (471-584)||(19422866-19422983)
chr1 (473-582)||(41097946-41098055)
chr1 (479-574)||(51041463-51041557)
chr1 (11-57)||(27715000-27715046)
chr1 (479-574)||(19799013-19799109)
chr1 (479-574)||(23192817-23192913)
chr1 (479-574)||(25188272-25188368)
chr1 (473-574)||(33055038-33055139)
chr1 (479-574)||(16035607-16035703)
chr1 (479-574)||(16649613-16649708)
chr1 (479-570)||(33301180-33301272)
chr1 (479-574)||(40165979-40166075)
chr1 (479-574)||(47451225-47451321)
chr1 (479-574)||(47455386-47455482)
chr1 (11-57)||(37405908-37405954)
chr1 (586-627)||(27711274-27711315)
chr1 (539-579)||(8267891-8267931)
chr1 (479-574)||(10140088-10140184)
chr1 (657-709)||(17031981-17032033)
chr1 (11-57)||(5728674-5728721)
chr1 (531-574)||(25855170-25855213)
chr1 (501-574)||(3094113-3094187)
chr1 (511-574)||(4632958-4633022)
chr1 (479-574)||(12259995-12260091)
chr1 (482-572)||(39588370-39588461)
chr1 (541-574)||(16832100-16832133)
[»] chr3 (83 HSPs)
chr3 (94-627)||(17368666-17369199)
chr3 (87-620)||(55128743-55129276)
chr3 (219-609)||(54270609-54270986)
chr3 (219-609)||(34128923-34129299)
chr3 (219-609)||(4117345-4117730)
chr3 (219-614)||(3482166-3482560)
chr3 (219-609)||(17357801-17358179)
chr3 (219-614)||(3476699-3477083)
chr3 (219-620)||(10321396-10321784)
chr3 (1540-2002)||(32238112-32238575)
chr3 (61-336)||(20090191-20090463)
chr3 (61-336)||(20095316-20095588)
chr3 (87-336)||(15762585-15762831)
chr3 (87-336)||(15767746-15767992)
chr3 (1633-2048)||(32222905-32223321)
chr3 (408-627)||(30341773-30341993)
chr3 (408-616)||(20090591-20090801)
chr3 (408-616)||(20095716-20095926)
chr3 (408-620)||(15762959-15763173)
chr3 (408-620)||(15768120-15768334)
chr3 (471-609)||(17364028-17364168)
chr3 (61-208)||(3481649-3481796)
chr3 (87-208)||(34128437-34128558)
chr3 (87-208)||(17358566-17358686)
chr3 (87-208)||(30338126-30338247)
chr3 (61-208)||(30341204-30341351)
chr3 (87-208)||(54271312-54271433)
chr3 (471-584)||(13022017-13022130)
chr3 (471-584)||(33089335-33089448)
chr3 (118-208)||(3476249-3476339)
chr3 (118-208)||(4117007-4117097)
chr3 (471-584)||(38436983-38437096)
chr3 (471-584)||(53119517-53119630)
chr3 (471-584)||(20810362-20810475)
chr3 (1541-1698)||(32238584-32238741)
chr3 (471-584)||(26962049-26962162)
chr3 (478-585)||(2617255-2617363)
chr3 (477-574)||(21494300-21494398)
chr3 (479-574)||(758368-758464)
chr3 (479-574)||(23666123-23666219)
chr3 (479-574)||(24038371-24038467)
chr3 (479-574)||(39775728-39775824)
chr3 (479-574)||(8069677-8069772)
chr3 (473-582)||(10586177-10586286)
chr3 (479-574)||(3672583-3672679)
chr3 (479-574)||(3692615-3692711)
chr3 (479-574)||(14438695-14438791)
chr3 (479-574)||(18467222-18467318)
chr3 (479-574)||(20520051-20520147)
chr3 (479-574)||(49971424-49971520)
chr3 (495-572)||(1688902-1688980)
chr3 (11-57)||(3478439-3478485)
chr3 (11-57)||(15764511-15764557)
chr3 (11-57)||(17362634-17362680)
chr3 (11-57)||(17367276-17367322)
chr3 (11-57)||(20092142-20092188)
chr3 (477-585)||(27605133-27605242)
chr3 (219-307)||(30338506-30338595)
chr3 (479-574)||(7571218-7571314)
chr3 (479-573)||(8883168-8883263)
chr3 (528-574)||(25726843-25726889)
chr3 (473-581)||(795399-795508)
chr3 (479-574)||(3033641-3033737)
chr3 (479-574)||(3418992-3419088)
chr3 (479-570)||(12112641-12112733)
chr3 (479-574)||(18472005-18472100)
chr3 (479-574)||(29350237-29350333)
chr3 (686-740)||(49359192-49359247)
chr3 (481-549)||(26706808-26706877)
chr3 (479-574)||(32474680-32474774)
chr3 (479-574)||(8887927-8888023)
chr3 (479-574)||(12965873-12965969)
chr3 (500-582)||(31002689-31002771)
chr3 (472-582)||(45904442-45904552)
chr3 (522-584)||(6024109-6024171)
chr3 (484-557)||(25023929-25024003)
chr3 (479-547)||(1741109-1741178)
chr3 (479-574)||(29715641-29715737)
chr3 (531-574)||(27708875-27708918)
chr3 (219-270)||(30341720-30341771)
chr3 (539-574)||(53358242-53358277)
chr3 (244-289)||(10321816-10321861)
chr3 (479-520)||(27708988-27709029)
[»] chr2 (50 HSPs)
chr2 (61-627)||(40392266-40392832)
chr2 (87-627)||(40518075-40518620)
chr2 (219-627)||(28751483-28751877)
chr2 (87-336)||(42728175-42728421)
chr2 (88-291)||(42723007-42723210)
chr2 (87-336)||(44096596-44096842)
chr2 (87-278)||(44754161-44754352)
chr2 (87-278)||(44759327-44759518)
chr2 (90-278)||(40519929-40520122)
chr2 (408-620)||(42723380-42723594)
chr2 (408-620)||(42728549-42728763)
chr2 (408-628)||(44096246-44096468)
chr2 (408-620)||(44754525-44754739)
chr2 (408-620)||(44759691-44759905)
chr2 (61-208)||(4162895-4163042)
chr2 (61-208)||(28751021-28751168)
chr2 (219-398)||(4163331-4163507)
chr2 (474-584)||(42914632-42914742)
chr2 (635-761)||(36594228-36594355)
chr2 (476-574)||(5089278-5089376)
chr2 (479-574)||(30658262-30658358)
chr2 (479-574)||(9180724-9180820)
chr2 (479-574)||(10160724-10160820)
chr2 (479-574)||(1934993-1935089)
chr2 (479-574)||(9189803-9189899)
chr2 (479-574)||(18344430-18344526)
chr2 (473-574)||(11658882-11658984)
chr2 (11-57)||(42724940-42724986)
chr2 (11-57)||(44756092-44756138)
chr2 (502-582)||(19538377-19538458)
chr2 (479-582)||(6297886-6297989)
chr2 (479-574)||(30650928-30651024)
chr2 (502-582)||(28854996-28855077)
chr2 (479-574)||(12796924-12797020)
chr2 (479-574)||(19578414-19578510)
chr2 (479-574)||(19892466-19892562)
chr2 (479-574)||(25478297-25478393)
chr2 (479-574)||(25497325-25497421)
chr2 (479-574)||(31326738-31326834)
chr2 (576-615)||(4163525-4163564)
chr2 (473-574)||(39542901-39543004)
chr2 (481-574)||(29677380-29677474)
chr2 (478-574)||(160040-160137)
chr2 (477-561)||(28945181-28945266)
chr2 (479-574)||(7737851-7737947)
chr2 (479-570)||(35601925-35602017)
chr2 (483-574)||(42926763-42926857)
chr2 (530-578)||(22844814-22844862)
chr2 (479-584)||(29907368-29907470)
chr2 (483-584)||(39542509-39542611)
[»] chr7 (64 HSPs)
chr7 (219-614)||(2234384-2234765)
chr7 (219-627)||(16539166-16539559)
chr7 (219-627)||(16626103-16626496)
chr7 (219-620)||(21080793-21081182)
chr7 (219-614)||(42571904-42572286)
chr7 (219-609)||(12934363-12934738)
chr7 (219-614)||(43892816-43893210)
chr7 (219-609)||(17495367-17495744)
chr7 (219-609)||(17557470-17557847)
chr7 (231-609)||(32212419-32212784)
chr7 (61-336)||(33238296-33238568)
chr7 (219-614)||(19309365-19309746)
chr7 (87-336)||(47994094-47994340)
chr7 (61-291)||(33243515-33243745)
chr7 (87-336)||(47999269-47999515)
chr7 (383-614)||(47177024-47177256)
chr7 (1540-2029)||(2040476-2040959)
chr7 (408-620)||(33237954-33238168)
chr7 (408-620)||(33243131-33243345)
chr7 (408-616)||(47998931-47999141)
chr7 (408-618)||(47993754-47993966)
chr7 (61-208)||(21080321-21080468)
chr7 (87-208)||(2233978-2234099)
chr7 (507-628)||(22857715-22857836)
chr7 (61-208)||(32211965-32212112)
chr7 (61-208)||(42572600-42572747)
chr7 (87-208)||(17496100-17496221)
chr7 (87-208)||(17556993-17557114)
chr7 (61-208)||(12935084-12935231)
chr7 (61-208)||(19308876-19309023)
chr7 (471-584)||(9973452-9973565)
chr7 (61-208)||(47176496-47176643)
chr7 (471-584)||(24528344-24528457)
chr7 (471-572)||(33226416-33226517)
chr7 (87-201)||(16538699-16538813)
chr7 (87-201)||(16626849-16626963)
chr7 (61-208)||(43893542-43893689)
chr7 (627-733)||(5888351-5888458)
chr7 (471-584)||(28292496-28292607)
chr7 (61-140)||(47544749-47544828)
chr7 (479-574)||(4579507-4579603)
chr7 (481-574)||(3357634-3357728)
chr7 (473-582)||(27256234-27256343)
chr7 (479-583)||(8076040-8076145)
chr7 (479-574)||(9650967-9651063)
chr7 (479-574)||(23246933-23247029)
chr7 (479-574)||(23866067-23866163)
chr7 (479-574)||(26341198-26341294)
chr7 (635-706)||(36935090-36935161)
chr7 (11-57)||(33241732-33241778)
chr7 (11-57)||(47997529-47997575)
chr7 (479-583)||(12254069-12254174)
chr7 (219-307)||(47176904-47176993)
chr7 (479-574)||(4930232-4930328)
chr7 (479-574)||(13314236-13314332)
chr7 (479-574)||(44423137-44423233)
chr7 (479-574)||(10388367-10388461)
chr7 (479-574)||(8268292-8268388)
chr7 (479-574)||(44510677-44510773)
chr7 (477-574)||(19640298-19640395)
chr7 (477-582)||(40865351-40865456)
chr7 (479-574)||(27238241-27238337)
chr7 (496-570)||(42627214-42627289)
chr7 (528-574)||(16372397-16372443)
[»] scaffold0594 (2 HSPs)
scaffold0594 (219-627)||(8962-9356)
scaffold0594 (61-208)||(8534-8681)
[»] scaffold0060 (3 HSPs)
scaffold0060 (209-629)||(36956-37361)
scaffold0060 (150-208)||(37654-37712)
scaffold0060 (473-582)||(47851-47960)
[»] chr8 (63 HSPs)
chr8 (219-620)||(21643835-21644222)
chr8 (209-627)||(24884660-24885064)
chr8 (305-609)||(17955626-17955919)
chr8 (219-609)||(43998984-43999360)
chr8 (339-620)||(42514245-42514515)
chr8 (87-336)||(32010820-32011066)
chr8 (87-336)||(32015994-32016240)
chr8 (61-316)||(2165394-2165650)
chr8 (408-627)||(32015645-32015866)
chr8 (1540-1979)||(33956815-33957273)
chr8 (219-493)||(21643395-21643652)
chr8 (61-208)||(43998546-43998693)
chr8 (61-208)||(17955134-17955281)
chr8 (87-208)||(24885324-24885445)
chr8 (471-584)||(19430004-19430117)
chr8 (471-584)||(19435506-19435619)
chr8 (471-584)||(19566153-19566266)
chr8 (471-584)||(19571655-19571768)
chr8 (471-574)||(33616719-33616822)
chr8 (219-386)||(21641520-21641684)
chr8 (219-386)||(21641895-21642059)
chr8 (219-386)||(21642270-21642434)
chr8 (219-386)||(21643020-21643184)
chr8 (61-208)||(42513848-42513995)
chr8 (219-386)||(21642645-21642809)
chr8 (471-584)||(31030518-31030631)
chr8 (635-761)||(20519763-20519890)
chr8 (635-761)||(38148632-38148759)
chr8 (118-208)||(21641184-21641273)
chr8 (517-627)||(32010483-32010595)
chr8 (478-584)||(13584340-13584454)
chr8 (479-574)||(31449866-31449962)
chr8 (479-574)||(38182237-38182333)
chr8 (479-574)||(44925923-44926019)
chr8 (11-57)||(21645574-21645620)
chr8 (11-57)||(32014255-32014301)
chr8 (479-574)||(15875668-15875764)
chr8 (479-574)||(19166633-19166729)
chr8 (479-574)||(40125885-40125981)
chr8 (408-462)||(32010605-32010659)
chr8 (479-574)||(17025934-17026030)
chr8 (479-574)||(17556426-17556522)
chr8 (479-574)||(18876367-18876462)
chr8 (479-574)||(24090626-24090722)
chr8 (479-574)||(33416546-33416642)
chr8 (227-290)||(42514182-42514245)
chr8 (481-574)||(1807471-1807565)
chr8 (479-576)||(2965627-2965725)
chr8 (473-574)||(37771711-37771812)
chr8 (479-574)||(43302718-43302815)
chr8 (479-574)||(17953873-17953969)
chr8 (479-574)||(34118465-34118561)
chr8 (479-574)||(36683578-36683674)
chr8 (531-574)||(40130739-40130782)
chr8 (479-572)||(1910969-1911063)
chr8 (481-574)||(28559656-28559750)
chr8 (507-574)||(34818726-34818794)
chr8 (477-579)||(25367991-25368093)
chr8 (501-574)||(4238337-4238411)
chr8 (501-574)||(4243076-4243150)
chr8 (655-696)||(9518434-9518476)
chr8 (541-574)||(15951584-15951617)
chr8 (1463-1508)||(33957324-33957369)
[»] scaffold0166 (5 HSPs)
scaffold0166 (219-614)||(13493-13877)
scaffold0166 (219-609)||(18946-19328)
scaffold0166 (61-208)||(12986-13133)
scaffold0166 (118-208)||(18500-18590)
scaffold0166 (11-57)||(15233-15279)
[»] scaffold0014 (5 HSPs)
scaffold0014 (87-336)||(31839-32085)
scaffold0014 (408-627)||(31492-31711)
scaffold0014 (87-336)||(26667-26913)
scaffold0014 (408-620)||(26325-26539)
scaffold0014 (11-57)||(30102-30148)
[»] scaffold0055 (2 HSPs)
scaffold0055 (87-336)||(3318-3564)
scaffold0055 (408-627)||(3003-3224)
[»] scaffold0052 (2 HSPs)
scaffold0052 (87-336)||(80971-81217)
scaffold0052 (408-627)||(81311-81532)
[»] scaffold0011 (2 HSPs)
scaffold0011 (471-572)||(1567-1668)
scaffold0011 (471-584)||(7036-7149)
[»] scaffold0132 (2 HSPs)
scaffold0132 (472-584)||(2765-2877)
scaffold0132 (472-584)||(10725-10837)
[»] scaffold0067 (1 HSPs)
scaffold0067 (479-584)||(33968-34074)
[»] scaffold0352 (1 HSPs)
scaffold0352 (479-574)||(7103-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (479-574)||(9887-9983)
[»] scaffold0002 (1 HSPs)
scaffold0002 (479-574)||(4073-4169)
[»] scaffold0165 (1 HSPs)
scaffold0165 (11-57)||(15542-15588)
[»] scaffold0061 (1 HSPs)
scaffold0061 (473-582)||(45776-45885)
[»] scaffold0020 (1 HSPs)
scaffold0020 (473-574)||(1220-1321)
[»] scaffold0017 (1 HSPs)
scaffold0017 (473-582)||(152902-153011)
[»] scaffold0045 (1 HSPs)
scaffold0045 (479-574)||(83065-83161)
[»] scaffold0012 (1 HSPs)
scaffold0012 (479-574)||(166086-166182)
[»] scaffold0057 (1 HSPs)
scaffold0057 (479-568)||(35639-35729)
[»] scaffold0018 (1 HSPs)
scaffold0018 (474-562)||(171711-171798)


Alignment Details
Target: chr6 (Bit Score: 1891; Significance: 0; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 1891; E-Value: 0
Query Start/End: Original strand, 61 - 2048
Target Start/End: Original strand, 22702948 - 22704935
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22702948 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 22703047  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703048 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 22703147  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  22703148 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttattg 22703247  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  22703248 agtggtctacgtaccatattagagtggttttttgaaacttttcgaaaaccatattgaggtgttattctcgagtgatttctgacagtgcagcctttaatcg 22703347  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22703348 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgac 22703447  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaacactactgaataggatgagggacgccggagatgag 660  Q
     |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  22703448 ataatcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaacactaccgaataggatgagggacgccggaggtgag 22703547  T
Q  661 gtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaatagtgttggatttgaggaaaagcgaaaaccgaggtgtggttt 760  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703548 gtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaatagtgttggatttgaggaaaagcgaaaaccgaggtgtggttt 22703647  T
Q  761 tagagagagaacaaaggttttagtttagaaacggtggtgcagaaacaagctaggaaagtttatgattactcaaccgataaagatggaattgaaacggcgg 860  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703648 tagagagagaacaaaggtttttgtttagaaacggtggtgcagaaacaagctaggaaagtttatgattactcaaccgataaagatggaattgaaacggcgg 22703747  T
Q  861 tattagggcaccactccttattgaaaatcttctaaaacacacaatattcatttaaaatattatattttcacaaatttgaatgaccttaaaattataacta 960  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703748 tattagggcaccactccttattgaaaatcttctaaaacacacaatattcatttaaaatattatattttcacaaatttgaatgaccttaaaattataacta 22703847  T
Q  961 atactgcagaacacacgctgcagggtcatacatgaaatggtgaagtagtgactacaatatgcttaaaaaacagtacgtatttctcagattctcaatagat 1060  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703848 atactgcagaacacacgctgcagggccatacatgaaatggtgaagtagtgactacaatatgcttaaaaaacagtacgtatttctcagattctcaatagat 22703947  T
Q  1061 gtgcggaatatggtattaaaacctcacattctaacatggaaatagaaaaaaccacattaagaataatcattttattactcgtgaaatatcttgaagataa 1160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703948 gtgcggaatatggtattaaaacctcacattctaacatggaaatagaaaaaaccacattaagaataatcattttattactcgtgaaatatcttgaagataa 22704047  T
Q  1161 cacttatatctcatgatatcttaaagtacttgtaaaagtcattttataatctaaccaactttggtaactagttatacaatctaaccaagtttagtaacta 1260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704048 cacttatatctcatgatatcttaaagtacttgtaaaagtcattttataatctaaccaactttggtaactagttatacaatctaaccaagtttagtaacta 22704147  T
Q  1261 gtttcaacttcaataaaagggctaaccttgtcaatcttatccttctgctcaggagcataacaaaaccattttcattatcaaaaacagaagcatcttcaag 1360  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704148 gtttcaacttcaataaaagggctaaccttgtcaatcttatccttcttctcaggagcataacaaaaccattttcattatcaaaaacagaagcatcttcaag 22704247  T
Q  1361 ttttaatgatatgtgtatgttgatatcctttagaaaactagcaagagaacgcagcaggaattggttacctcagttagatatccccgttttggaattggtt 1460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704248 ttttaatgatatgtgtatgttgatatcctttagaaaactagcaagagaacgcagcaggaattggttacctcagttagatatccccgttttggaattggtt 22704347  T
Q  1461 accgatgatgtgaaccctcttgaagtggagagaacgcagcaggaatctcgatacgacagtgttccaatgcttcatggaattatgtagagcacgttgacgt 1560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704348 accgatgatgtgaaccctcttgaagtggagagaacgcagcaggaatctcgatacgacagtgttccaatgcttcatggaattatgtagagcacgttgacgt 22704447  T
Q  1561 gtatgagaattttgaaggagctaccttggatttggttagggaggtcaacaattcactggttctgaacattgtagtgaacgaggaagacactgcctcttct 1660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704448 gtatgagaattttgaaggagctaccttggatttggttagggaggtcaacaattcactggttctgaacattgtagtgaacgaggaagacactgcctcttct 22704547  T
Q  1661 aaagacatgccctcgaccatagttgttcatccacaccatattgcagtgcacaaagtccctacaacaccgattgatggttcagtcacaccagcctatgcca 1760  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704548 aaagacatgccctcgaccatagttgttcacccacaccatattgcggtgcacaaagtccctacaacaccgattgatggttcagtcacaccagcctatgcca 22704647  T
Q  1761 ttaattcggttctagacccgtcgcaacagtccctgcctttgttgcagactgggttctcatgaacagcaacatatgcacacaaatcctgctgacagatgat 1860  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704648 ttaattcggttctagacccgtcgcaacagtccctgcctttgttgcagactgggttctcatgaacagcaacatatgcacacaaatcctgctgacagatgat 22704747  T
Q  1861 gcagttccattagctgcggccagtgtgtttagctcggctcccgttgcaagttcattagccacgcatgaagttggtcttgtgcagcatagtaatccaagga 1960  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704748 gcagttccattagctgcggccagtgtgtttagctcggctcccgttgcaagttcattagccacgcatgaagttggtcttgtgcagcatagtaatccaagga 22704847  T
Q  1961 ttcaacatgctatggagctttgacagtgaatcaaagactataacaagagggcagctgaacctcctttcattcctgtcttgtctaaaaa 2048  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704848 ttcaacatgctatggagctttgacagtgaatcaaagactataacaagagggcagctgaacctcctttcattcctgtcttgtctaaaaa 22704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 61 - 620
Target Start/End: Complemental strand, 21402254 - 21401709
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21402254 ggaacactagtgtataatgaaaaaaacttggagtatagtagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21402155  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  21402154 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagcttgggaatagtattcatcactcaaaaac 21402055  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    | |||||||||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21402054 taagaatcgaatactcttctttggttttctctcctctcttctccctcctgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21401955  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21401954 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 21401855  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| |               ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21401854 tacagttag--------------aatcctggagacggcgcggttgctagtctaccttccacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 21401769  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 620  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  21401768 ctggtcgtgactcatcccggtaatagtttcaaagctctatcgtaattttcaaattacaaa 21401709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 61 - 627
Target Start/End: Original strand, 29490812 - 29491385
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29490812 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcttttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 29490911  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcggg--aata----gtattc-ttcact 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    ||||    || ||  ||||||    
T  29490912 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagag-tggtttaaatactcagttttggttcact 29491010  T
Q  254 ccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttgg 353  Q
    ||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  29491011 ccaaaactgagaatcaaatactcttctctgattttatctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttttttcctccttctttgg 29491110  T
Q  354 tttatcgagtggtctacgtaccatattagagtggtttt-tcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcc 452  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29491111 tttatcgagtggtctacgtaccatattagagtggttttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcc 29491210  T
Q  453 tttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag 552  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29491211 tttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag 29491310  T
Q  553 aaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  29491311 aaagcgacttggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacacaaacaaca 29491385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 290 - 620
Target Start/End: Complemental strand, 21396983 - 21396653
Alignment:
Q  290 tctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtt 389  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396983 tctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtt 21396884  T
Q  390 tttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcct 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  21396883 tttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcct 21396784  T
Q  490 ggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagttt 589  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396783 ggagatggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagttt 21396684  T
Q  590 caaagctctgtcgtaattttcaaattacaaa 620  Q
    |||||||||||||||||||||||||||||||    
T  21396683 caaagctctgtcgtaattttcaaattacaaa 21396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 219 - 620
Target Start/End: Complemental strand, 34376270 - 34375873
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  34376270 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 34376175  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  ||||||| |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||    
T  34376174 tgttgacgaaccgttcttttcttcctccctctttggtttctcgagtggtctgcgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactga 34376076  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  34376075 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctaatctacgtt 34375976  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  34375975 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccgataatagtttcaaaactccgtcgtaattttcaaattac 34375876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 219 - 627
Target Start/End: Original strand, 24191126 - 24191531
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24191126 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 24191221  T
Q  318 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  24191222 tgttgacgaaccgtttttttctttcctccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 24191320  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||||    
T  24191321 aggtgttattctcgagagatttctggcagtgcagcctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttactagtctacct 24191420  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttca-aagctctgtcgtaattttcaaatt 615  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  24191421 tgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagcttcataagctctgtcgtaa-tttcaaatt 24191519  T
Q  616 acaaatacaaca 627  Q
    ||||| ||||||    
T  24191520 acaaaaacaaca 24191531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 219 - 627
Target Start/End: Original strand, 24192223 - 24192628
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24192223 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 24192318  T
Q  318 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  24192319 tgttgacgaaccgtttttttctttcctccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 24192417  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  24192418 aggtgttattctcgagagatttctggcagtgcagcctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 24192517  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttca-aagctctgtcgtaattttcaaatt 615  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  24192518 tgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagcttcataagctctgtcgtaa-tttcaaatt 24192616  T
Q  616 acaaatacaaca 627  Q
     |||| ||||||    
T  24192617 tcaaaaacaaca 24192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 231 - 609
Target Start/End: Complemental strand, 34142418 - 34142041
Alignment:
Q  231 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 329  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    ||||| ||||||||||||    
T  34142418 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttgtgttgacgaacc 34142323  T
Q  330 gttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 428  Q
    ||||||| ||| |||||||||||||||| |||||| |||| || ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  34142322 gttcttttcttccctccttctttggtttctcgagttgtctgcgaaccatattagagtggtttttcgaa--ttttcgaaa-ccatactgaggtgttattct 34142226  T
Q  429 cgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag 528  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34142225 cgagcgatttctagcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgg 34142126  T
Q  529 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc----aaagctctgtcgtaatttt 609  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    | |||||||||||||||||    
T  34142125 gtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaacagtttcatatatagctctgtcgtaatttt 34142041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 231 - 609
Target Start/End: Complemental strand, 34155034 - 34154657
Alignment:
Q  231 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 329  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    ||||| ||||||||||||    
T  34155034 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttgtgttgacgaacc 34154939  T
Q  330 gttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 428  Q
    ||||||| ||| |||||||||||||||| |||||| |||| || ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  34154938 gttcttttcttccctccttctttggtttctcgagttgtctgcgaaccatattagagtggtttttcgaa--ttttcgaaa-ccatactgaggtgttattct 34154842  T
Q  429 cgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag 528  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34154841 cgagcgatttctagcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgg 34154742  T
Q  529 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc----aaagctctgtcgtaatttt 609  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    | |||||||||||||||||    
T  34154741 gtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaacagtttcatatatagctctgtcgtaatttt 34154657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 31981904 - 31981528
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  31981904 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 31981809  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 416  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  31981808 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 31981720  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctac 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||||||||||||||||||||||||||    
T  31981719 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttttagaatctggcctgttttatcctggagacggcgcggttgctagtctac 31981620  T
Q  515 cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  31981619 cttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaa---tttcgaagctctgtcgtaatttt 31981528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 2817901 - 2818277
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| ||||||||||||||   |||||| ||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  2817901 tataaatagagagctcgggaatgagattctttactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 2817996  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  2817997 tgttgacgaaccgttcttttcttcctccttgtttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 2818085  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||   | ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  2818086 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagaaagaatctgagctgttttatcctggagacggcgcggtttctagtctacctt 2818185  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  2818186 gcacaacttaggtagtaacgcaaaacgtcttaaagaaagcgacctggtcgtgattcacctcggtaatagtttcaaagctctgtcgtaatttt 2818277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 61 - 336
Target Start/End: Original strand, 22697772 - 22698044
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697772 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 22697871  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697872 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 22697971  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  22697972 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 22698044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 155; E-Value: 2e-81
Query Start/End: Original strand, 408 - 620
Target Start/End: Original strand, 22698172 - 22698386
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  22698172 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 22698271  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  22698272 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 22698371  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  22698372 ttttcaaattacaaa 22698386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 138; E-Value: 3e-71
Query Start/End: Original strand, 1540 - 1999
Target Start/End: Complemental strand, 20737341 - 20736883
Alignment:
Q  1540 ttatgtagagcacgttgacgtgtatgagaattttgaaggagctaccttggatttggttagggaggtcaacaattcactggttctgaacattgtagtgaac 1639  Q
    |||||||||||| ||||||||| ||||||||||||| || ||||||||||||| | |||||||||| | |  ||| | |||| |||||||||||||| ||    
T  20737341 ttatgtagagcatgttgacgtgcatgagaattttgatggcgctaccttggattcgattagggaggtgagctcttcgccggttttgaacattgtagtgcac 20737242  T
Q  1640 gaggaagacactgcctcttctaaagacatgccctcgaccatagttgttcatccacaccatattgcagtgcacaaagtccctacaacaccgattgatggtt 1739  Q
    ||||||| |||| ||||||||||||||||||||||  |||||||| | ||||  ||||||||||  ||||||| | |||||  | ||| ||| ||| |||    
T  20737241 gaggaagtcacttcctcttctaaagacatgccctcagccatagttttgcatctgcaccatattgtggtgcacacactccctgtagcactgatagatagtt 20737142  T
Q  1740 cagtcacaccagcctatgccattaattcggttctaga-cccgtcgcaacagtccctgcctttgttgcagactgggttctcatgaacagcaacatatgcac 1838  Q
    ||||||||| |||||||||||||||||| |||| ||| ||| || || | |  || | ||||||||||||||  || | | || ||| |||| || ||||    
T  20737141 cagtcacacaagcctatgccattaattcagttccagaccccttcccagccg--cccgtctttgttgcagactcagtacacgtggacaacaacttaggcac 20737044  T
Q  1839 acaaatcctgctgacagatgatgcagttccattagctgcggccagtgtgtttagctcggctcccgttgcaagttcattagccacgcatgaagttggtctt 1938  Q
    |||||| |||||||||  |||||   |||||  |||| || ||| ||||| |||||||| |||| |||  | |||||||||||| |||||||||||| ||    
T  20737043 acaaattctgctgacacctgatgtgattccagcagctacgaccattgtgtctagctcggatcccattgacaattcattagccacacatgaagttggtatt 20736944  T
Q  1939 gtgcagcatagtaatccaaggattcaacatgctatggagctttgacagtgaatcaaagact 1999  Q
    | | | || |||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  20736943 gcgtatcacagtaatccaaggattcaacatgatatggagctttggcagcgaatcaaagact 20736883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 5e-48
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 2817401 - 2817548
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2817401 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 2817500  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2817501 aattgaaaatttaatgtcccacattgggtagatcacacactctagtag 2817548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 1e-45
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 34142928 - 34142781
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34142928 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 34142829  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34142828 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 34142781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 95; E-Value: 1e-45
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 34155544 - 34155397
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34155544 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 34155445  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34155444 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 34155397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 90; E-Value: 1e-42
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 19478251 - 19478138
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19478251 atctgggctgttttatcgtggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19478152  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  19478151 ctcaacccggtaat 19478138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 474 - 584
Target Start/End: Original strand, 13605087 - 13605197
Alignment:
Q  474 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactc 573  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  13605087 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactc 13605186  T
Q  574 accccggtaat 584  Q
    | |||||||||    
T  13605187 aacccggtaat 13605197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 79; E-Value: 4e-36
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 6727777 - 6727924
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  6727777 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 6727876  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6727877 aattgaaaattttatgttccacattgggtagatcacacactctagtag 6727924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 79; E-Value: 4e-36
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 34376611 - 34376464
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  34376611 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 34376512  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  34376511 aattgaaaattttatgtcccacattgggtagataacacactctagtag 34376464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 3e-34
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 24190654 - 24190802
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  24190654 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 24190753  T
Q  161 aattgaaaa-ttttatgtcccacatcgggtagatcacacactctagtag 208  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24190754 aattgaaaatttttatgtcccacattgggtagatcacacactctagtag 24190802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 31983622 - 31983475
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||| ||||||||||||||    
T  31983622 ggaacactagtgtatattggcaaaaacttggagtatactagtttttatgaggagacattggaatgtaaacacaatgatgtagaaattagtgtaaagtgtg 31983523  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  31983522 aattgaaaattttatgtcccgcattgggtagatcacacactctagtag 31983475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 6e-29
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 6728285 - 6728394
Alignment:
Q  347 tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagt 446  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||           |||| ||||||||||||||||||||||||||||||||    
T  6728285 tctttggtttctcgagtggtctacgtgccatattagactggtttttcgaaac-----------catactgaggtgttattctcgagcgatttctggcagt 6728373  T
Q  447 gcagcctttaatcgtacagtt 467  Q
    |||||||||||||||||||||    
T  6728374 gcagcctttaatcgtacagtt 6728394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 473 - 585
Target Start/End: Complemental strand, 10642811 - 10642698
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||| |||||||||| |||| ||||||||||| |||||||||||||||||| | || ||||||| ||||||||||||||||||||||| | ||||||||    
T  10642811 ctgggatgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgac 10642712  T
Q  572 tcaccccggtaata 585  Q
    ||| ||||||||||    
T  10642711 tcaacccggtaata 10642698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 1e-27
Query Start/End: Original strand, 481 - 584
Target Start/End: Complemental strand, 3902006 - 3901902
Alignment:
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 579  Q
    ||||||||||||| ||||||||||| || |||||||||||||| ||| | ||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccg 3901907  T
Q  580 gtaat 584  Q
    |||||    
T  3901906 gtaat 3901902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 12182998 - 12183096
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||| |||||| || |||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  12182998 gctgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 12183096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 478 - 574
Target Start/End: Original strand, 5600971 - 5601068
Alignment:
Q  478 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||| ||||| ||||||||||| || |||||||| ||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  5600971 ctgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5601068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 541 - 614
Target Start/End: Original strand, 6728397 - 6728472
Alignment:
Q  541 aacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 614  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||| ||||    
T  6728397 aacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctatcgtaatttttaaat 6728472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 6e-20
Query Start/End: Original strand, 474 - 584
Target Start/End: Original strand, 17281558 - 17281669
Alignment:
Q  474 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 572  Q
    ||||||||||||||||  || ||  ||||||| ||||||||||| ||||| |  || ||||||||||||||||||||||||||||||| || ||||||||    
T  17281558 tgggctgttttatcctaaaggcgatgcggttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtgact 17281657  T
Q  573 caccccggtaat 584  Q
    || |||||||||    
T  17281658 caacccggtaat 17281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 31476007 - 31476120
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||| ||||||||||||||||||||||| ||||| ||||  |||||||| ||||||  ||||||||| |||| ||||||||  ||| ||||| ||||||    
T  31476007 atctgagctgttttatcctggagacggcgtggttgttagttgaccttgcataacttaaatagtgccgccaaacatcttaaagtgagcaacctgatcgtga 31476106  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  31476107 ctcaacccgataat 31476120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 31495833 - 31495946
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| ||||| || ||| |||||||||| |||| | ||||||  ||| ||||| ||||||    
T  31495833 atctgggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtga 31495932  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  31495933 ctcaacccgataat 31495946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 31501219 - 31501332
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| ||||| || ||| |||||||||| |||| | ||||||  ||| ||||| ||||||    
T  31501219 atctgggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtga 31501318  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  31501319 ctcaacccgataat 31501332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 22699738 - 22699784
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22699738 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 22699784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 29325639 - 29325525
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 569  Q
    ||||||||| ||||||| ||||| || | | |||| ||||||||||||||||| ||||||||||| ||  |||||||||||| | |||||| || |||||    
T  29325639 atctgggctattttatcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaaagagcgacttgatcgtg 29325540  T
Q  570 actcaccccggtaat 584  Q
    ||||| |||||||||    
T  29325539 actcaacccggtaat 29325525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 11570749 - 11570845
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| | |||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||| ||||||||    
T  11570749 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactca 11570845  T

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Target: chr6; HSP #37
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 471 - 574
Target Start/End: Original strand, 31515723 - 31515826
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    |||| |||||||||||||||||||||||| ||||| |||| ||| ||||| || ||| |||||||||| |||| | ||||||  ||| ||||| ||||||    
T  31515723 atctaggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtga 31515822  T
Q  571 ctca 574  Q
    ||||    
T  31515823 ctca 31515826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 584
Target Start/End: Original strand, 5740792 - 5740896
Alignment:
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 579  Q
    ||||||||| | | ||||||||||| ||||| ||||||||||| |||  |||||| || ||||||||||||||| || ||||| ||| ||||||| ||||    
T  5740792 ttttatcctagtggcggcgcggttgatagtccaccttgcacaaacttgagtagtgtcgtgaaacgtcttaaagagagtgacctagtcatgactcaacccg 5740891  T
Q  580 gtaat 584  Q
    |||||    
T  5740892 gtaat 5740896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 12406353 - 12406449
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| || || ||||| | ||| |||||| ||||||||||||| ||| | |||| ||||||||||| |||| ||||||||||||||||||||    
T  12406353 tgttttatcatgaaggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacgtctttaagagagcgacctggtcgtgactca 12406449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 554
Target Start/End: Original strand, 17964559 - 17964635
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaa 554  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || || ||||||| |||||||||||||||||    
T  17964559 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagaa 17964635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 24589164 - 24589260
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||| || ||  |||| | |||||||| ||||||| ||||| ||| ||||||||||    
T  24589164 tgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgactca 24589260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 33687603 - 33687699
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||||||||  ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||| || |||||    
T  33687603 tgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtggtaactca 33687699  T

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Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 6728193 - 6728246
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaat 272  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||    
T  6728193 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaat 6728246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 2700106 - 2700202
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||  ||||| ||||| ||||||  ||||||||| || |   |||||| |||||||||||||||| ||||| ||||||||||||||    
T  2700106 tgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 2700202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 6407860 - 6407956
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| | ||| |||| || ||  |||||| ||||||||||| |||| ||||||||| ||||||||||    
T  6407860 tgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctgatcgtgactca 6407956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 12689066 - 12688970
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  || || |||  | | |||||||||||||| || ||||||||| |||||||    
T  12689066 tgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagagagtgacctggtcatgactca 12688970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 531 - 574
Target Start/End: Complemental strand, 11428085 - 11428042
Alignment:
Q  531 agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  11428085 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 11428042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 574
Target Start/End: Original strand, 6112972 - 6113068
Alignment:
Q  478 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||||||| || | |||||  ||||||||||||||||| || ||||| || || ||  ||||||||||||||| ||||| ||||||||||    
T  6112972 ctgttttatcctggaggcg-cacggttattagtctaccttgcacaatttcaggtaatgtcgtgattcgtcttaaagaaagcaacctgatcgtgactca 6113068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 8747877 - 8747781
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| |||||  |||| ||| ||  ||||||||| || ||  |||| | || ||||||||||||| ||||||||||||||||||||    
T  8747877 tgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactca 8747781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 13736678 - 13736774
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| | | | ||||| |||||| ||||||||||  ||||| |||||| ||||||||| |||||| || |||||||| | ||||||    
T  13736678 tgttttatcctggaggcagtgtggttggtagtcttccttgcacaattttaggcagtgccacgaaacgtcgtaaagagagggacctggtggcgactca 13736774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 21309126 - 21309030
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| | ||||||||  || || ||||||  ||||||||||||||| |||||  |||| ||||||||    
T  21309126 tgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagagagcgatatggtagtgactca 21309030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 553
Target Start/End: Original strand, 16836156 - 16836231
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaga 553  Q
    ||||||||||||||| ||||| ||||| |||||| ||||| ||||  || || |||||| ||||||||||||||||    
T  16836156 tgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 12662673 - 12662711
Alignment:
Q  544 gtcttaaagaaagcgacctggtcgtgactcaccccggta 582  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  12662673 gtcttaaagaaagcgacctggttgtgactcaacccggta 12662711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 539 - 584
Target Start/End: Original strand, 11956762 - 11956807
Alignment:
Q  539 gaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaat 584  Q
    ||||||||||||||| |||||||||||| ||||||| |||| ||||    
T  11956762 gaaacgtcttaaagagagcgacctggtcatgactcaacccgataat 11956807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 526; Significance: 0; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 61 - 627
Target Start/End: Original strand, 8984987 - 8985553
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8984987 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8985086  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985087 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 8985186  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8985187 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 8985286  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985287 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 8985386  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985387 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 8985486  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8985487 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaacacaaca 8985553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 61 - 627
Target Start/End: Complemental strand, 13701023 - 13700457
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13701023 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 13700924  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700923 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 13700824  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13700823 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 13700724  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700723 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 13700624  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700623 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 13700524  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13700523 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 13700457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 61 - 627
Target Start/End: Original strand, 8979867 - 8980433
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979867 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8979966  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8979967 aattgaaaattttatgtcccatatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgagaatagtattcttcactccaaaac 8980066  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8980067 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 8980166  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980167 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 8980266  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980267 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 8980366  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8980367 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 8980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 61 - 627
Target Start/End: Original strand, 21299415 - 21299981
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21299415 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtg 21299514  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21299515 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaaaac 21299614  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21299615 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21299714  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299715 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 21299814  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299815 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 21299914  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21299915 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 21299981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 515; E-Value: 0
Query Start/End: Original strand, 61 - 620
Target Start/End: Original strand, 21304535 - 21305094
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304535 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21304634  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304635 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 21304734  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21304735 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21304834  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21304835 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 21304934  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21304935 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaaagtcttaaagaaagcgac 21305034  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21305035 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 21305094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 61 - 627
Target Start/End: Complemental strand, 54991989 - 54991433
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991989 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 54991890  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  54991889 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgaaagctcgggaatagtattcttcacttcaaaac 54991790  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  54991789 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttcttttctccttctttggtttatcg 54991690  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    |||||| ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991689 agtggtttacgtaccatattagagtggtttttc----------gaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 54991600  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991599 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 54991500  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  54991499 ctggtcgtgactcaccccggtaatagtttcaaagctttgtcgtaattttcaaattacaaaaacaaca 54991433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 219 - 627
Target Start/End: Complemental strand, 41393584 - 41393192
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 318  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| || ||| ||||| ||    ||||| |    
T  41393584 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctcccc-ctcatctccatc----ggtttgt 41393490  T
Q  319 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgag 418  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||           |||||||||    
T  41393489 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgaaccatattagagtggtttttcgaaac-----------catattgag 41393401  T
Q  419 gtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41393400 gtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgtgctgttttatcctggagacggcgcggttgctagtctaccttg 41393301  T
Q  519 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 618  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41393300 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 41393201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 209 - 627
Target Start/End: Original strand, 51019117 - 51019521
Alignment:
Q  209 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 307  Q
    ||||||||  ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  51019117 aaatcctctctataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 51019216  T
Q  308 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 407  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||             
T  51019217 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac--------- 51019303  T
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
      |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  51019304 --catattgaagtgttattctcgagcgatttctggcaatgcagcatttaatcgtacagttagaatctgggatgttttatcctggagacggcgcggttgct 51019401  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51019402 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 51019501  T
Q  608 ttcaaattacaaatacaaca 627  Q
    |||||||||||||| |||||    
T  51019502 ttcaaattacaaattcaaca 51019521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 219 - 614
Target Start/End: Complemental strand, 53797970 - 53797589
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  53797970 tataaatagagagctcgggattagcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 53797875  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    ||||||||||| |||||||  |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||           ||||||||    
T  53797874 tgttgacgaactgttcttttcttcctccttctttggttttttgagtggtctacgtgccatattagagtggtttttcgaaac-----------catattga 53797786  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  53797785 ggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 53797686  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 614  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53797685 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 53797589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 234; E-Value: 1e-128
Query Start/End: Original strand, 61 - 355
Target Start/End: Original strand, 54990392 - 54990686
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    ||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54990392 ggaacactaatgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagtgtg 54990491  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  54990492 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaattctccttataaattgagagctcgggtatagtattcttcactccaaaac 54990591  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtt 355  Q
    |||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54990592 tgagaatcaaatactcttctcttgttttctctcctctctactccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtt 54990686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 219 - 625
Target Start/End: Original strand, 9763771 - 9764167
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 318  Q
    ||||||| |||||||||||| | ||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| |||  ||  ||||||||||| |    
T  9763771 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctcccct-tctcatc--tcccgcggtttgt 9763867  T
Q  319 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggttttt-cgaaacttttcgaaaaccatattga 417  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||| ||       |||||||||||||||| ||||||||||||||| |||||||||    
T  9763868 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtata-------tattagagtggttttttcgaaacttttcgaaa-ccatattga 9763959  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  9763960 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctagagacggtgcggttgttagtctacctt 9764059  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 617  Q
    ||||||||||||||||||| |||||| |||||||| | |||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||||    
T  9764060 gcacaacttaggtagtgccacgaaacatcttaaagtaggcgacctggtcgtgactctccctggtaatagtttcaaacctccgtcgtaattttcaaattac 9764159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 13711010 - 13710634
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13711010 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 13710915  T
Q  318 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  13710914 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 13710826  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  13710825 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 13710726  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  13710725 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcga-ctggtcgtgactcaccccggtaatattttcgaagctccgtcgtaatttt 13710634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 209; E-Value: 1e-113
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 13695503 - 13695124
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13695503 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 13695408  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 416  Q
    ||||||| |||| ||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  13695407 tgttgacaaaccattcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 13695319  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctac 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   | |||| |||||||||||||||||||||||||||||||||||||||    
T  13695318 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttttagaatctaggctgttttatcctggagacggcgcggttgctagtctac 13695219  T
Q  515 cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||    
T  13695218 cttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcaccccggtaatattttcgaagctccctcgtaatttt 13695124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 47046060 - 47046438
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||  |||| |||||||||||| ||| ||| ||||||||  |    ||     
T  47046060 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcatcttctctggttttctccccttctcatctccctcagg----ttg 47046155  T
Q  318 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    ||||||||||||||||||| ||| ||||| |||||||||| ||| ||||||| ||| |||||||||||||||||| ||||||||||||||| ||||| ||    
T  47046156 tgttgacgaaccgttcttttcttccctccctctttggtttctcgggtggtctgcgtgccatattagagtggtttt-cgaaacttttcgaaa-ccatactg 47046253  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    |||||||||||||||||||||||||||||||         ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  47046254 aggtgttattctcgagcgatttctggcagtg---------atcgtacagtttgaatctgagctgttttatcctggagacggcgcggttgctagtctacct 47046344  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaatttt 609  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||| ||||    
T  47046345 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccccggtaattgttccaaaagctctgtcgtattttt 47046438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 39999609 - 39999363
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39999609 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 39999510  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39999509 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 39999410  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  39999409 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 39999363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 40004567 - 40004321
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40004567 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 40004468  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40004467 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 40004368  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  40004367 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 40004321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 54343743 - 54343497
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54343743 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 54343644  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54343643 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 54343544  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  54343543 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 54343497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 54348897 - 54348651
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54348897 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 54348798  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54348797 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 54348698  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  54348697 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 54348651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 181; E-Value: 6e-97
Query Start/End: Original strand, 87 - 291
Target Start/End: Complemental strand, 36359868 - 36359664
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36359868 cttggagtatactagtgagtttgtggagcctttgaaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36359769  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36359768 ggtagatcacacactctagtagaaattctccttataaattgagagctcaggaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 36359669  T
Q  287 ttctc 291  Q
    |||||    
T  36359668 ttctc 36359664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 179; E-Value: 9e-96
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 36354682 - 36354436
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36354682 cttggagtatactagtgaatttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36354583  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36354582 ggtagatcacacactctagtagaaatcctctttataaattgagagctcagaaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 36354483  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  36354482 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 36354436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 158; E-Value: 3e-83
Query Start/End: Original strand, 408 - 627
Target Start/End: Complemental strand, 36359460 - 36359239
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  36359460 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 36359361  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa-gctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||  ||||| |    
T  36359360 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaggctccatcgtata 36359261  T
Q  606 ttttcaaattacaaatacaaca 627  Q
    ||||||||||||||| ||||||    
T  36359260 ttttcaaattacaaaaacaaca 36359239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 155; E-Value: 2e-81
Query Start/End: Original strand, 408 - 620
Target Start/End: Complemental strand, 54348523 - 54348309
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  54348523 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 54348424  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  54348423 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 54348324  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  54348323 ttttcaaattacaaa 54348309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 407 - 627
Target Start/End: Complemental strand, 36354343 - 36354121
Alignment:
Q  407 aaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgc 506  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  36354343 aaccatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgc 36354244  T
Q  507 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa-gctctgtcgta- 604  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||  |||||     
T  36354243 tagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccgataatagtttcaaaggctccatcgtat 36354144  T
Q  605 attttcaaattacaaatacaaca 627  Q
    ||||| |||||||||| ||||||    
T  36354143 atttttaaattacaaaaacaaca 36354121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 408 - 620
Target Start/End: Complemental strand, 40004193 - 40003979
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  40004193 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 40004094  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  40004093 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 40003994  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  40003993 ttttcaaattacaaa 40003979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 147; E-Value: 1e-76
Query Start/End: Original strand, 408 - 620
Target Start/End: Complemental strand, 39999235 - 39999021
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  39999235 accatatcgaggtgtcattctcgagcgatttctggcagtgtagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 39999136  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  39999135 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 39999036  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  39999035 ttttcaaattacaaa 39999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 147; E-Value: 1e-76
Query Start/End: Original strand, 408 - 620
Target Start/End: Complemental strand, 54343369 - 54343155
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||||||||||||||||    
T  54343369 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctgtagacggcgcggttgct 54343270  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  54343269 agtctaccttgcacaattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 54343170  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  54343169 ttttcaaattacaaa 54343155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 8e-50
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 53798450 - 53798329
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  53798450 cttggagtatactagttggtttgtggagcctttggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcctacattg 53798351  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  53798350 ggtagatcacacactctagtag 53798329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 1e-45
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 41394005 - 41393858
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41394005 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtgaagcctttggaatgtaaacacaaggatggaaaaactagtgtaaagtgtg 41393906  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  41393905 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 41393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 2e-41
Query Start/End: Original strand, 471 - 582
Target Start/End: Complemental strand, 653146 - 653035
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  653146 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 653047  T
Q  571 ctcaccccggta 582  Q
    |||| |||||||    
T  653046 ctcatcccggta 653035  T

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Target: chr4; HSP #30
Raw Score: 86; E-Value: 3e-40
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 51018732 - 51018853
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||| |||||||||   | ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  51018732 cttggaatatactagttgttatgtggagactttggaatgtacacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 51018831  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  51018832 ggtagatcacacactctagtag 51018853  T

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Target: chr4; HSP #31
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 9763273 - 9763420
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||  ||    
T  9763273 ggaacactagtgtatattggcataaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagcatg 9763372  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  9763373 aattgaaaattttatgtcccacattgagtagatcacacactctagtag 9763420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 13695904 - 13695757
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13695904 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13695805  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13695804 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13695757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 13711517 - 13711370
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13711517 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13711418  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13711417 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 7e-38
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 10120801 - 10120914
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  10120801 atctgggctattttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtga 10120900  T
Q  571 ctcaccccggtaat 584  Q
    |||| || ||||||    
T  10120901 ctcaacctggtaat 10120914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 76; E-Value: 3e-34
Query Start/End: Original strand, 635 - 761
Target Start/End: Original strand, 12889052 - 12889179
Alignment:
Q  635 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaatagt-gttggatttga 733  Q
    |||||||||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  12889052 ataggatgagggacaccggaggtgaggtgatgcggaggcctcgcctcgtcgcaccaccaccatttggatctacatcgtgatggatagtggttggatttga 12889151  T
Q  734 ggaaaagcgaaaaccgaggtgtggtttt 761  Q
    || |||| | |||||  | |||||||||    
T  12889152 gggaaaggggaaaccacgatgtggtttt 12889179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 4207188 - 4207042
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||| ||||| |||| ||||||||||||||||||||    
T  4207188 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaa-cacaatgatgtagaaactagtgtaaagtgtg 4207090  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4207089 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 4207042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 1e-27
Query Start/End: Original strand, 88 - 208
Target Start/End: Original strand, 47045647 - 47045767
Alignment:
Q  88 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 187  Q
    |||||||||||||||   | || |||| | || |||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||| ||    
T  47045647 ttggagtatactagttgttatgaggagacattagaatgtaaacacaatgaaatagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 47045746  T
Q  188 gtagatcacacactctagtag 208  Q
     ||||||||||||||||||||    
T  47045747 atagatcacacactctagtag 47045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 471 - 572
Target Start/End: Original strand, 8083019 - 8083121
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 569  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||| | |||||||| ||||||||||||||| ||||||||| |||||    
T  8083019 atctgggctgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtg 8083118  T
Q  570 act 572  Q
    |||    
T  8083119 act 8083121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 24490132 - 24490022
Alignment:
Q  474 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 572  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||| |||   ||||| |||||||||||||||||| ||||| ||||||||||||    
T  24490132 tgggctgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgact 24490033  T
Q  573 caccccggtaa 583  Q
    || ||||||||    
T  24490032 caacccggtaa 24490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 37259877 - 37259973
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || | |||||||| |||||||||||||||||||||||||||||||||||||    
T  37259877 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgactca 37259973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 6e-23
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 31269129 - 31269033
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  31269129 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31269033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 4e-21
Query Start/End: Original strand, 477 - 585
Target Start/End: Complemental strand, 34644655 - 34644546
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcac 575  Q
    |||||||||||||| || ||||||||||| |||| |||||| |||||  | || ||||| ||||||||||||||||||||||||| || ||||||||||     
T  34644655 gctgttttatcctgtaggcggcgcggttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactcaa 34644556  T
Q  576 cccggtaata 585  Q
    ||||||||||    
T  34644555 cccggtaata 34644546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 5271419 - 5271515
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  5271419 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 5271515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 13521992 - 13522088
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  13521992 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 13522088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 31273616 - 31273520
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  31273616 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31273520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 33463356 - 33463452
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| |||||  | ||| ||||||||||||| ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  33463356 tgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 33463452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 37264564 - 37264660
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||| || || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  37264564 tgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 37264660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 13699113 - 13699067
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13699113 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 13699067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 21301325 - 21301371
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21301325 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 21301371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 36357916 - 36357870
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36357916 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 36357870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 40002844 - 40002798
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40002844 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 40002798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 54346978 - 54346932
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  54346978 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 54346932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 500 - 584
Target Start/End: Complemental strand, 39319706 - 39319621
Alignment:
Q  500 cggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaat 584  Q
    |||||| |||||||||||||||||  | | |||||| || ||||||||||||||||||||||||| |||||||||| |||||||||    
T  39319706 cggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctgatcgtgactcaacccggtaat 39319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 31765981 - 31765885
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  || || |||||| |||||||||||||||| || |||||||| ||||||||    
T  31765981 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctggttgtgactca 31765885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 454 - 583
Target Start/End: Original strand, 5928194 - 5928324
Alignment:
Q  454 ttaatcgtacagttggcatctgggct-gttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaa 551  Q
    ||||||| ||||||| || ||||||| |||||||||||||| ||| | ||||| |||||| |||||||||| || | | |||||| | |||| |||||||    
T  5928194 ttaatcgaacagttg-cagctgggcttgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaa 5928292  T
Q  552 gaaagcgacctggtcgtgactcaccccggtaa 583  Q
    || |||||||||||||||||||| || |||||    
T  5928293 gagagcgacctggtcgtgactcaacctggtaa 5928324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 8981777 - 8981823
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8981777 catcactaagaatggtatttttgttgggaaagggtacgccattgatg 8981823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 479 - 584
Target Start/End: Original strand, 10318779 - 10318885
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 577  Q
    |||| |||||| ||| ||||||||||| ||||||||||||||||| ||| | ||    ||||||| |||||||||| |||||| ||||||||||||| ||    
T  10318779 tgttctatcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtcttaaagagagcgacatggtcgtgactcaacc 10318878  T
Q  578 cggtaat 584  Q
    |||||||    
T  10318879 cggtaat 10318885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 13702991 - 13702945
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  13702991 catcactaagaatggtacttttgttgggaaagggtacgccactgatg 13702945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 473 - 585
Target Start/End: Complemental strand, 17359633 - 17359525
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||| ||||| |||||||||  ||||| |||| |||||||||||| |||| ||  |||||||||| |||||||||||||||||||||     |||||||    
T  17359633 ctgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtcttaaagaaagcga-----tcgtgac 17359539  T
Q  572 tcaccccggtaata 585  Q
    ||| ||||||||||    
T  17359538 tcaacccggtaata 17359525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 8693806 - 8693710
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||| ||| ||||| ||||| |||| |  ||||||||| || || ||| ||| |||||||||||||||| ||||||||||||||||||||    
T  8693806 tgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgactca 8693710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 16421124 - 16421028
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||| || ||||| ||||| |||||| |||||||||| || ||  |||||| ||||| ||||||| || ||||||||||||||||||||    
T  16421124 tgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgactca 16421028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 477 - 568
Target Start/End: Original strand, 30564412 - 30564504
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 568  Q
    ||||||||||||| ||| |||| |  ||| ||||||||||||||||| || || |||||||||||||||||||| ||| |||||||| |||||    
T  30564412 gctgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcgacctagtcgt 30564504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 572
Target Start/End: Original strand, 31729387 - 31729481
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 572  Q
    ||||||||||||||| ||||| | ||| | |||| |||||||||| || || ||||||| |||||||||||||||| ||||||||| || |||||    
T  31729387 tgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctgatcatgact 31729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 462
Target Start/End: Original strand, 54990687 - 54990732
Alignment:
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgta 462  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  54990687 aggtgttattctcgagcaatttctggtagtgcagcctttaatcgta 54990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 2819939 - 2819843
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||  ||||  ||| | ||||||||||||||||| || ||  ||| || |||||| ||||||||||| ||||||||||||||||||    
T  2819939 tgttttatcctggacgcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactca 2819843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 12823895 - 12823991
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||| |  ||||||||| || ||  |||||| ||||| |||||||||| |||||||||||| |||||||    
T  12823895 tgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactca 12823991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 34560565 - 34560489
Alignment:
Q  507 tagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 582  Q
    |||||||||||||| || || || |||||||| ||   ||||||||||||||||||||||||||||||| |||||||    
T  34560565 tagtctaccttgcataatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccggta 34560489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 55251814 - 55251719
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||||||  |||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||| | ||||||||||||||||||||    
T  55251814 tgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 55251719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 574
Target Start/End: Original strand, 42758756 - 42758851
Alignment:
Q  480 gttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||| |||||| || || ||||| ||||||  ||||||||| || ||  |||||| |||||| ||||||||| ||||||||||||||||||||    
T  42758756 gttttattctggaggcgacgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactca 42758851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 473 - 574
Target Start/End: Original strand, 3998051 - 3998152
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||| ||||||||||||||| |  | |||||| |||||||| |||||||| || || |||||||| ||    |||||||||||||||||||||||||||    
T  3998051 ctgggttgttttatcctggaggca-cacggttgttagtctactttgcacaatttcgggtagtgccgtgatttatcttaaagaaagcgacctggtcgtgac 3998149  T
Q  572 tca 574  Q
    |||    
T  3998150 tca 3998152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 33468973 - 33469069
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| |||||  |||| |||||  ||||| ||||||||||||| ||  |||||| | |||||||||||||| | |||||| |||||||||||    
T  33468973 tgttttatcatggaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagtcgtgactca 33469069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 818 - 874
Target Start/End: Original strand, 54221327 - 54221382
Alignment:
Q  818 gtttatgattactcaaccgataaagatggaattgaaacggcggtattagggcaccac 874  Q
    ||||||||| ||||||| |||||| ||| | ||||||||||||||||||||||||||    
T  54221327 gtttatgataactcaactgataaa-atgcatttgaaacggcggtattagggcaccac 54221382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 572
Target Start/End: Complemental strand, 19102072 - 19101978
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 572  Q
    ||||||||||||||| || || ||||| ||||||   |||||||| || | |||||||| |||||||||||||| | || ||||| |||||||||    
T  19102072 tgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagagtgacctcgtcgtgact 19101978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 563
Target Start/End: Original strand, 31298384 - 31298469
Alignment:
Q  478 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctg 563  Q
    |||||||||||||||| || | | |||| |||||||||||||||||  | | |||||| |  |||||||||||||||||||||||||    
T  31298384 ctgttttatcctggaggcg-cacagttgttagtctaccttgcacaaactcgagtagtgtcatgaaacgtcttaaagaaagcgacctg 31298469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 563
Target Start/End: Original strand, 8030476 - 8030561
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctg 563  Q
    ||||||||||||||| | |||  |||| ||||||| |||||||||  || || |||||| | |||||||||||||| |||||||||    
T  8030476 tgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctg 8030561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 514; Significance: 0; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 61 - 627
Target Start/End: Complemental strand, 17510571 - 17510005
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510571 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 17510472  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510471 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 17510372  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17510371 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 17510272  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510271 agtggtctacgtaccatattagagtggtttttcgaaattttttgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 17510172  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510171 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 17510072  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  17510071 ctggtcgtgactcaccccggtaatggtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 17510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 61 - 620
Target Start/End: Complemental strand, 42020086 - 42019527
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  42020086 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactaatgtaaaatgtg 42019987  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019986 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 42019887  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  42019886 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccattctttctttcctccttctttggtttatcg 42019787  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019786 agtggtttacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 42019687  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019686 tacagttagaatctgggctgttttatcctggagacggcacggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 42019587  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42019586 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaaatacaaa 42019527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 87 - 627
Target Start/End: Complemental strand, 17505440 - 17504900
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  17505440 cttggaatatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaactattgtaaagtgtgaattgaaaattttatgtcccacatcg 17505341  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17505340 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 17505241  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505240 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 17505141  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  17505140 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagggatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 17505041  T
Q  487 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 586  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17505040 cctggagacgacgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccccggtaatag 17504941  T
Q  587 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  17504940 tttcaaagctctgtcataattttcaaattacaaaaacaaca 17504900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 87 - 627
Target Start/End: Complemental strand, 41859071 - 41858541
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  41859071 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaattagtgtaaagtgtgaattgaaaattctatgtcccacatcg 41858972  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41858971 ggtagatcacac--tctagtagaaattctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 41858874  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||| ||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  41858873 ttctcttctctcttc-------cgcggtttgtgttgacgaaccgttctttctttcctcattctttggtttatcgagtggtctacataccatattagagtg 41858781  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  41858780 gttttttgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 41858681  T
Q  487 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 586  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  41858680 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctgatcgtgactca-cccggtaatag 41858582  T
Q  587 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  41858581 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 41858541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 87 - 497
Target Start/End: Complemental strand, 43580147 - 43579737
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580147 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 43580048  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||| ||    
T  43580047 ggtagatcacatactctagtagaaatcctccttataaattgagagctcgggaatagtatttttcacaccaaaactgagaatcgaatactcttctctgatt 43579948  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43579947 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttattgagtggtctacgtaccatattagagtg 43579848  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  43579847 gtttttcgaaacttttcgaaaactatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 43579748  T
Q  487 cctggagacgg 497  Q
    |||||||||||    
T  43579747 cctggagacgg 43579737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 280 - 627
Target Start/End: Complemental strand, 41853842 - 41853496
Alignment:
Q  280 tctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatat 379  Q
    ||||||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41853842 tctggttttctctgctctcttctccctcccgcggtttgttttaacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatat 41853743  T
Q  380 tagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggct 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  41853742 tagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgtagcctttaatcgtacagttagaatctgggct 41853643  T
Q  480 gttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 579  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  41853642 gttttatcgtagagacggcgcggttgctagtctactttgcacaacttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactca-cccg 41853544  T
Q  580 gtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41853543 gtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 41853496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 219 - 628
Target Start/End: Complemental strand, 36254177 - 36253772
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 318  Q
    ||||||| ||||||| |||||| | ||||||||||||||||| ||||||||||| ||||| ||| |||||||| ||| |||  ||  |||| | |||| |    
T  36254177 tataaatagagagcttgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctagttttctc-cctttctcatc--tccctcagtttgt 36254081  T
Q  319 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgag 418  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36254080 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtttgcgtaccatattagagtggtttttcgaaacttttcgaaa-ccatattgag 36253982  T
Q  419 gtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 518  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36253981 gtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggaggcggcgcggttgctagtctaccttg 36253882  T
Q  519 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 618  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36253881 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 36253782  T
Q  619 aatacaacac 628  Q
    || |||||||    
T  36253781 aaaacaacac 36253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 219 - 627
Target Start/End: Original strand, 1413806 - 1414200
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||| ||||||||    |||||     
T  1413806 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctccccttctcatctccctc----ggtttg 1413901  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||           ||||||||    
T  1413902 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgc-taccatattagagtggtttttcgaaac-----------catattga 1413989  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||| |||||||||||||||||||||||||||||    
T  1413990 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgagttgttttatcttggagacggcgcggttgctagtctacctt 1414089  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaa-ttttcaaatta 616  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  1414090 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccagtaatagtttcaaagctttgtcgtaatttttcaaatta 1414189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 244; E-Value: 1e-134
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 42024866 - 42024566
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  42024866 ggaacactagtgtataatgaaaaaaacttgaagtatactagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaaatgtg 42024767  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42024766 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaat 42024667  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||    
T  42024666 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaatcgttctttctttcctccttctttggtttttcg 42024567  T
Q  361 a 361  Q
    |    
T  42024566 a 42024566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 219; E-Value: 1e-119
Query Start/End: Original strand, 219 - 620
Target Start/End: Complemental strand, 26709444 - 26709056
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||| |||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  26709444 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 26709349  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||| ||||| ||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  26709348 tgttgatgaaccattcttttcttcctccttctttggtttctcgagtggtctg-gtaccatattagagtggtttttcgaaac-----------catattga 26709261  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||||    
T  26709260 ggtgttattctcgagcgattactggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagatgacgcggttgctagtctacctt 26709161  T
Q  518 g--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 615  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26709160 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 26709061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 219; E-Value: 1e-119
Query Start/End: Original strand, 219 - 620
Target Start/End: Complemental strand, 26979178 - 26978790
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||| |||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  26979178 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 26979083  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||| ||||| ||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  26979082 tgttgatgaaccattcttttcttcctccttctttggtttctcgagtggtctg-gtaccatattagagtggtttttcgaaac-----------catattga 26978995  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||||    
T  26978994 ggtgttattctcgagcgattactggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagatgacgcggttgctagtctacctt 26978895  T
Q  518 g--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 615  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26978894 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 26978795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 24776563 - 24776945
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24776563 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 24776658  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 416  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  24776659 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 24776747  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgc---ggttgctagtc 511  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||   | ||||||||||||||||||||||||||||||   |||||||||||    
T  24776748 aggtgttattctcgagcgatttctggcagtgaatcctttaatcgtacagttttagaatctgggctgttttatcctggagacggcgccgcggttgctagtc 24776847  T
Q  512 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  24776848 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaatattttcgaagctctgtcgtaatttt 24776945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 178; E-Value: 4e-95
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 24771108 - 24771487
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||| ||| | |||||||| ||||||||||  |||||| || |||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24771108 tataaatagagagctcaggattggtattctttactccaaaaccaagaatcaaacactcttctctggttttctccccttctcatctccctc----ggtttg 24771203  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| | ||| | |||| |||| |||||||||||||||||  |         || ||||    
T  24771204 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcgatctgcataccgtatttgagtggtttttcgaaaccgt---------at-ttga 24771293  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctacc 515  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||   | ||||||| ||||||||||||||||||||||||||| |||||||||    
T  24771294 ggtgttattctcgagcgatttctagcagtgtagcctttaatcgtacagttttagaatctgggttgttttatcctggagacggcgcggttgttagtctacc 24771393  T
Q  516 ttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  24771394 ttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcatcccggtaatattttcgaagctctgtcgtaatttt 24771487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 2e-50
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 41853956 - 41853846
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41853956 cttggagtatactagggagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattctatgtcccacatcg 41853857  T
Q  187 ggtagatcaca 197  Q
    |||||||||||    
T  41853856 ggtagatcaca 41853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 2e-44
Query Start/End: Original strand, 88 - 208
Target Start/End: Original strand, 1413100 - 1413220
Alignment:
Q  88 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 187  Q
    |||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |     
T  1413100 ttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattga 1413199  T
Q  188 gtagatcacacactctagtag 208  Q
    |||||||||||||||||||||    
T  1413200 gtagatcacacactctagtag 1413220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 2e-41
Query Start/End: Original strand, 471 - 582
Target Start/End: Original strand, 13582682 - 13582793
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  13582682 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 13582781  T
Q  571 ctcaccccggta 582  Q
    |||| |||||||    
T  13582782 ctcatcccggta 13582793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 2e-41
Query Start/End: Original strand, 471 - 582
Target Start/End: Complemental strand, 14374238 - 14374127
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  14374238 atctgggctgttttatcctggagacggcgtggttgttagtctaccctgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 14374139  T
Q  571 ctcaccccggta 582  Q
    |||| |||||||    
T  14374138 ctcaacccggta 14374127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 2e-41
Query Start/End: Original strand, 471 - 582
Target Start/End: Original strand, 24435861 - 24435972
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  24435861 atctgggctgttttatcctggagacggcgtggttgatagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 24435960  T
Q  571 ctcaccccggta 582  Q
    |||| |||||||    
T  24435961 ctcatcccggta 24435972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 3e-40
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 36254638 - 36254517
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   | ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |    
T  36254638 cttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgttccacattg 36254539  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  36254538 ggtagatcacacactctagtag 36254517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 1e-39
Query Start/End: Original strand, 471 - 579
Target Start/End: Complemental strand, 7805174 - 7805066
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  7805174 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtga 7805075  T
Q  571 ctcaccccg 579  Q
    |||| ||||    
T  7805074 ctcaacccg 7805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 24770605 - 24770752
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  24770605 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 24770704  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  24770705 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 24770752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 3e-37
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 26709804 - 26709688
Alignment:
Q  92 agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtag 191  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26709804 agtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtag 26709705  T
Q  192 atcacacactctagtag 208  Q
    || ||||| | ||||||    
T  26709704 attacacattgtagtag 26709688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 3e-37
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 26979538 - 26979422
Alignment:
Q  92 agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtag 191  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26979538 agtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtag 26979439  T
Q  192 atcacacactctagtag 208  Q
    || ||||| | ||||||    
T  26979438 attacacattgtagtag 26979422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 7e-35
Query Start/End: Original strand, 627 - 762
Target Start/End: Complemental strand, 36607173 - 36607037
Alignment:
Q  627 actactgaataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaatagt-gtt 725  Q
    ||||| |||||||||||||||||||| || ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  36607173 actaccgaataggatgagggacgccgaaggtgaggtgatgcggaggccgcacctcgtcgcaccaccaccaattggatctacatcgtgatgaatagtggtt 36607074  T
Q  726 ggatttgaggaaaagcgaaaaccgaggtgtggtttta 762  Q
    | |||||||| |||| ||| ||   ||||||||||||    
T  36607073 gaatttgagggaaagggaatacgacggtgtggtttta 36607037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 24776116 - 24776206
Alignment:
Q  118 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24776116 ttggaatgtaaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 24776206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 479 - 585
Target Start/End: Complemental strand, 28857958 - 28857850
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 576  Q
    |||||||||||| || ||||| ||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  28857958 tgttttatcctgtaggcggcgtggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 28857859  T
Q  577 ccggtaata 585  Q
    |||||||||    
T  28857858 ccggtaata 28857850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 6e-23
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 37248795 - 37248891
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || |||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  37248795 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 37248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 26667367 - 26667271
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  26667367 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 26667271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 26938964 - 26938868
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  26938964 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 26938868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 29167973 - 29168069
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  29167973 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 29168069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 416 - 574
Target Start/End: Complemental strand, 36428867 - 36428708
Alignment:
Q  416 gaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggct-gttttatcctggagacggcgcggttgctagtctac 514  Q
    ||||||| |||||||||||||||    ||||||||   ||||||| |||||||  | ||||||| |||||||||||||| ||||| ||||| |||||| |    
T  36428867 gaggtgtaattctcgagcgattttctacagtgcagtagttaatcgaacagttgt-agctgggcttgttttatcctggaggcggcgtggttgatagtctgc 36428769  T
Q  515 cttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| || ||  ||| |||| |||||||||||||| ||||||||||||||||||||    
T  36428768 cttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtcgtgactca 36428708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 556790 - 556694
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  556790 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 561562 - 561466
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  561562 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 7451853 - 7451757
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| | ||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  7451853 tgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7451757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 12103120 - 12103024
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| |||||||||||||| |||||    
T  12103120 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtaactca 12103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 36423732 - 36423636
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||| |||||| ||||| ||||| |||||| |||||||||| || ||  ||||||||||||||||||||||| ||||||||||||| ||||||    
T  36423732 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgactca 36423636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 36937511 - 36937607
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  36937511 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 36937607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 36942265 - 36942361
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  36942265 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 36942361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 17508676 - 17508630
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17508676 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17508630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 21323960 - 21324069
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||| ||||    
T  21323960 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaagaaagcgacctggtcatgac 21324058  T
Q  572 tcaccccggta 582  Q
    ||| |||||||    
T  21324059 tcaacccggta 21324069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 473 - 582
Target Start/End: Complemental strand, 31731644 - 31731535
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||  ||   ||||||||||||||||||||||||||||    
T  31731644 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccctgatttgtcttaaagaaagcgacctggtcgtgac 31731546  T
Q  572 tcaccccggta 582  Q
    ||| |||||||    
T  31731545 tcaacccggta 31731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 479 - 592
Target Start/End: Complemental strand, 31986822 - 31986708
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 577  Q
    |||||||||||| || ||||||  ||| || ||||||||||| || ||  ||||||| |||||||||||||||||||||||||||  |||||||||| ||    
T  31986822 tgttttatcctgaaggcggcgcaattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtcttaaagaaagcgaccttatcgtgactcaacc 31986723  T
Q  578 cggtaatagtttcaa 592  Q
    || ||||| ||||||    
T  31986722 cgataatattttcaa 31986708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 41857195 - 41857149
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41857195 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 41857149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 42023588 - 42023542
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42023588 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 42023542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 687 - 783
Target Start/End: Complemental strand, 27631473 - 27631376
Alignment:
Q  687 accaccaccatttggatctacatcgtgatgaatagt-gttggatttgaggaaaagcgaaaaccgaggtgtggttttagagagagaacaaaggttttag 783  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||| |||| ||||||    ||||||||||| |||||| ||| |||||||||    
T  27631473 accaccacaatttggatttacatcgtgatgaatagtggttggatttgagggaaagggaaaacaatagtgtggttttacagagaggacagaggttttag 27631376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 475 - 574
Target Start/End: Original strand, 13301482 - 13301581
Alignment:
Q  475 gggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactc 573  Q
    ||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||||    
T  13301482 gggctgttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactc 13301580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 32461549 - 32461645
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  32461549 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 32461645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 39518505 - 39518409
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtag-tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| || ||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  39518505 tgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39518409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 39523144 - 39523048
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtag-tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  39523144 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 42001529 - 42001433
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||| ||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  42001529 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 42001433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 24772849 - 24772895
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  24772849 catcactaagaatggtatttttgttgggaaaaggtacgccactgatg 24772895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 6514601 - 6514697
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||| || || ||  |||||| |||||||||||||||| || ||| |||||||||||||    
T  6514601 tgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagagtgacttggtcgtgactca 6514697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 10759820 - 10759915
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  || || |||||| | |||||||||||| | ||||||||||||||||||||    
T  10759820 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa-agagcgacctggtcgtgactca 10759915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 12045139 - 12045235
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||| | ||||||  ||||||||| || ||  |||||| ||||||||||||||||  |||||||||||||||||||    
T  12045139 tgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactca 12045235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 12501899 - 12501995
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||   |||||||| || ||  |||||| |||||||||||||||| |||||||||||| |||||||    
T  12501899 tgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgactca 12501995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 41996760 - 41996664
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||| ||||| || ||  |||||| |||||||||||||||| ||| ||||||||||||||||    
T  41996760 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgactca 41996664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 3666027 - 3665931
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||| |||  |||| ||||| |||||| |||||||||| || ||  |||||| ||||||||||| |||| |||||||| |||||||||||    
T  3666027 tgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactca 3665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 12041932 - 12042028
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||| | ||||||| |  || ||  |||||| |||||||||||||||| | ||||||||||||||||||    
T  12041932 tgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactca 12042028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 12102831 - 12102927
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||| ||||| | ||||| |||||| |||||||||| || ||  |||||| | ||| |||||||||| |||||||| |||||||||||    
T  12102831 tgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagagcgacctagtcgtgactca 12102927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 574
Target Start/End: Complemental strand, 40147988 - 40147894
Alignment:
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||| ||||| ||||| ||||||  |||||||||  || || |||||| |||||| ||||||||| ||||||||| || |||||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctgatcatgactca 40147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 6155419 - 6155515
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||| | ||||| ||||||  |||| | || || ||  |||||| |||||||||||||||| ||||||||| ||||||||||    
T  6155419 tgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgactca 6155515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 574
Target Start/End: Original strand, 25689296 - 25689388
Alignment:
Q  483 ttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||| || ||| |||||||| ||||| |||||||| || || |  |||||||||||||| ||||||||||| |||  |||||||||||||    
T  25689296 ttatcctagatacgacgcggttgatagtcgaccttgcataaatttgaatagtgccgcgaaacatcttaaagaaaacgatatggtcgtgactca 25689388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 533 - 574
Target Start/End: Original strand, 20181118 - 20181159
Alignment:
Q  533 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||| |||||||||||||||| || |||||||||||||||||    
T  20181118 tgccacgaaacgtcttaaagagagtgacctggtcgtgactca 20181159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 509; Significance: 0; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 87 - 627
Target Start/End: Complemental strand, 4050 - 3510
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4050 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 3951  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3950 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 3851  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3850 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttttttctttcctccttctttggtttatcgagtggtctatgtaccatattagagtg 3751  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  3750 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 3651  T
Q  487 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 586  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3650 cctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 3551  T
Q  587 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  3550 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 3510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 2166 - 2120
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2166 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 2120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 507; Significance: 0; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 87 - 629
Target Start/End: Original strand, 37409145 - 37409687
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409145 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 37409244  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37409245 ggtagatcacacactctagtataaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 37409344  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37409345 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttttttctttcctccttctttggtttatcgagtggtctatgtaccatattagagtg 37409444  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  37409445 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 37409544  T
Q  487 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 586  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409545 cctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 37409644  T
Q  587 tttcaaagctctgtcgtaattttcaaattacaaatacaacact 629  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  37409645 tttcaaagctctgtcgtaattttcaaattacaaaaacaacact 37409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 87 - 627
Target Start/End: Original strand, 37404026 - 37404564
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404026 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 37404125  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37404126 ggtagatcacacactctagtagaaatcctccttataaattgagagcccgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 37404225  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404226 ttctctcctctcttctccctcccg--gtttgtgttgacgaaccgttatttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 37404323  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  37404324 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 37404423  T
Q  487 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 586  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404424 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 37404523  T
Q  587 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  37404524 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 37404564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 87 - 627
Target Start/End: Complemental strand, 27716930 - 27716390
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27716930 cttggagtatactagtgagtttgtggagcctttggaacgtaagcacaaggatggagaaactagtgtaaagtgtgaattgaaatttttatgtcccacatcg 27716831  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27716830 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgataatcgaatactcttatctggtt 27716731  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716730 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 27716631  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  27716630 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagtctttaatcgtacagttagaatctgggctgttttat 27716531  T
Q  487 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 586  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716530 cctggagacgacgctgttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 27716431  T
Q  587 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  27716430 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 27716390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 87 - 594
Target Start/End: Original strand, 11250731 - 11251228
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11250731 cttggagtataccagtgagtttgtggagtctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 11250830  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  11250831 gttagatcacacactctagtagaaatcctccttataaattgagagctcgtgaatagtattctttactccaaaattgagaatcgaatactcttctctggtt 11250930  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11250931 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtatcatattagagtg 11251030  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    ||          ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| | ||||||||||||||||    
T  11251031 gt----------ttttcgaaaaccatattgaggtgttattctcgagcgattactggcagtgcagtctttaatcgtacagttagaatctgggctgttttat 11251120  T
Q  487 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 586  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251121 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 11251220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 61 - 559
Target Start/End: Complemental strand, 27711836 - 27711319
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711836 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 27711737  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711736 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 27711637  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27711636 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 27711537  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711536 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 27711437  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttg-------------------ctagtctaccttgcacaacttaggtagtgccgcgaa 541  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||                   ||||||||||||||||||||||||||||||||||||    
T  27711436 tacagttagaatctgggctgttttatcctggagatggcgcggttgctaggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaa 27711337  T
Q  542 acgtcttaaagaaagcga 559  Q
    ||||||||||||||||||    
T  27711336 acgtcttaaagaaagcga 27711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 234; E-Value: 1e-128
Query Start/End: Original strand, 219 - 614
Target Start/End: Complemental strand, 5730446 - 5730065
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  5730446 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 5730351  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  5730350 tgttgacgaaccgttcttttattcctccttctttggtttctcgagtggtctgtgtaccatattagagtggtttttcgaaac-----------catattga 5730262  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| | | ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  5730261 ggtgttattctcgagcgatttttggcagtgtagcctttaatcgtacagatagaatctgtgctgttttatcctggagacggtgcggttgctagtctacctt 5730162  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 614  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5730161 gcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 5730065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 3584942 - 3584566
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||| ||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  3584942 tataaatagagagctcaggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 3584847  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  3584846 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 3584758  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  3584757 ggtgttattgtcgagcgatttatggtagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 3584658  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3584657 gcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 3584566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 334 - 627
Target Start/End: Original strand, 11387666 - 11387978
Alignment:
Q  334 tttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11387666 tttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagc 11387765  T
Q  434 gatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcct-------------------ggagacggcgcggttgctagtctac 514  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||                   |||||||||||||||||||||||||    
T  11387766 gatttctgccagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggcgcggttgctaggagacggcgcggttgctagtctac 11387865  T
Q  515 cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 614  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  11387866 cttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcaccccgataatagtttcaaagctctgttgtaattttcaaat 11387965  T
Q  615 tacaaatacaaca 627  Q
    |||||| ||||||    
T  11387966 tacaaaaacaaca 11387978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 207; E-Value: 1e-112
Query Start/End: Original strand, 209 - 627
Target Start/End: Original strand, 48246427 - 48246823
Alignment:
Q  209 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 307  Q
    ||||||||  ||||||| |||| ||||| ||| | |||||||||| |||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  48246427 aaatcctctctataaatagagacctcggaaatgggattcttcactacaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 48246526  T
Q  308 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 407  Q
        ||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||             
T  48246527 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttaccgagtggtctacgtaccatataagagtggttttttgaaac--------- 48246613  T
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
      ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||    
T  48246614 --catattgaggtgttattctcgagcgatttctggcaatgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgct 48246711  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |   ||||||||||||||||||||||||||||||||||| |||||| |    
T  48246712 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag-------ctctgtcgtgactcaccccggtaatagtttcaaagctctatcgtaa-t 48246803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 87 - 290
Target Start/End: Original strand, 34317840 - 34318043
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317840 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 34317939  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34317940 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 34318039  T
Q  287 ttct 290  Q
    ||||    
T  34318040 ttct 34318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 199; E-Value: 1e-107
Query Start/End: Original strand, 87 - 336
Target Start/End: Original strand, 36684270 - 36684516
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684270 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36684369  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36684370 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttgactccaaaactgagaatcgaatactcttctctggtt 36684469  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  36684470 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 36684516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 192; E-Value: 1e-103
Query Start/End: Original strand, 321 - 614
Target Start/End: Complemental strand, 5725221 - 5724939
Alignment:
Q  321 tgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggt 420  Q
    ||||||||| ||||||  ||||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||           |||||||||||    
T  5725221 tgacgaaccattcttttcttccttcttctttggtttctcgagtggcctgcgtaccatattagagtggtttttcgaaac-----------catattgaggt 5725133  T
Q  421 gttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgca 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5725132 gttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgtgctgttttatcctggagacggcgcggttgctagtctaccttgca 5725033  T
Q  521 caacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 614  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||    
T  5725032 caatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacctcgataataatttcaaagctctgtcgtaattttaaaat 5724939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 408 - 620
Target Start/End: Original strand, 36684644 - 36684858
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  36684644 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 36684743  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  36684744 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 36684843  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  36684844 ttttcaaattacaaa 36684858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 142; E-Value: 1e-73
Query Start/End: Original strand, 415 - 626
Target Start/End: Original strand, 34318160 - 34318373
Alignment:
Q  415 tgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctac 514  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||||||||||||||||||||||||||    
T  34318160 tgaggtgtcattttcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatttgggctgttttatcctggagacggcgcggttgctagtctac 34318259  T
Q  515 cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-attttcaa 612  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||||  ||||| ||||||||    
T  34318260 cttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtgactcatcccggtaatagtttcaaaagctccatcgtatattttcaa 34318359  T
Q  613 attacaaatacaac 626  Q
    |||||||| |||||    
T  34318360 attacaaaaacaac 34318373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 1e-57
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 5725512 - 5725365
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725512 ggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 5725413  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5725412 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 5725365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 8e-53
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 3585448 - 3585301
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3585448 ggaacactagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaaatgtg 3585349  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3585348 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 3585301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 8e-50
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 5730917 - 5730771
Alignment:
Q  62 gaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtga 161  Q
    ||||||||||||||||||        |||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  5730917 gaacactagtgtataatggaaaaaatttggagtatactagttggtttgtgaaacctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtga 5730818  T
Q  162 attgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  5730817 attgaaaattttatgtcccacattgggtagatcacacactctagtag 5730771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 2e-41
Query Start/End: Original strand, 471 - 582
Target Start/End: Complemental strand, 10106206 - 10106095
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  10106206 atctgggttgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 10106107  T
Q  571 ctcaccccggta 582  Q
    |||| |||||||    
T  10106106 ctcaacccggta 10106095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 3e-40
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 39747157 - 39747270
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  39747157 atctgggctgttttatcctggagacgacgtggttgctagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtga 39747256  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  39747257 ctcaacccgataat 39747270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 3e-40
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 48245998 - 48246119
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |    
T  48245998 cttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattaaaatttttatgtcccacattg 48246097  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  48246098 ggtagatcacacactctagtag 48246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 4e-39
Query Start/End: Original strand, 471 - 582
Target Start/End: Complemental strand, 13890916 - 13890805
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  13890916 atctgggctgttttatcctggagacggtgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtga 13890817  T
Q  571 ctcaccccggta 582  Q
    |||| |||||||    
T  13890816 ctcaacccggta 13890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 7e-38
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 38734378 - 38734265
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  38734378 atctggactgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 38734279  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  38734278 ctcaacccgataat 38734265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 3e-34
Query Start/End: Original strand, 473 - 584
Target Start/End: Original strand, 26651160 - 26651271
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 572  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||| ||||||||| || |||||||||||||||    
T  26651160 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgact 26651259  T
Q  573 caccccggtaat 584  Q
    || |||| ||||    
T  26651260 caacccgataat 26651271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 4e-33
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 5602417 - 5602530
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    |||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||||||||| ||||| ||||||||||    
T  5602417 atctggactgttttatcttggagacggcgtggttgttagtctaccttgcacaactagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtga 5602516  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  5602517 ctcaacccggtaat 5602530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 14582202 - 14582089
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    |||||| |||||||||||||||||||| | ||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||| |||| |    
T  14582202 atctggactgttttatcctggagacggtgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacttcttaaagagagcgacctgatcgtaa 14582103  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  14582102 ctcaacccgataat 14582089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 50959010 - 50959069
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaac 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50959010 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaagaatggagaaac 50959069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 10135551 - 10135455
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||| ||| ||||| ||||| | |||| |||||||||| || |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  10135551 tgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 10135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 19422866 - 19422983
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctac----cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 566  Q
    ||||||||| |||||||||||||| ||||  |||| ||||||||    |||||||||||| |||||||| ||||||||||||||||| ||||| ||| ||    
T  19422866 atctgggctattttatcctggagatggcgtagttgttagtctacctaccttgcacaacttgggtagtgcagcgaaacgtcttaaagagagcgatctgatc 19422965  T
Q  567 gtgactcaccccggtaat 584  Q
    |||||||| ||| |||||    
T  19422966 gtgactcaacccagtaat 19422983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 41097946 - 41098055
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  41097946 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 41098044  T
Q  572 tcaccccggta 582  Q
    ||| |||||||    
T  41098045 tcaacccggta 41098055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 51041463 - 51041557
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| || || |||||| |||||||||||||| | ||||||||||||||||||||    
T  51041463 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 51041557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 27715046 - 27715000
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27715046 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 27715000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 19799013 - 19799109
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || || ||||||| |||||||||||||||| ||||| ||| ||||||||||    
T  19799013 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgactca 19799109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 23192817 - 23192913
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||||||  |||| ||||| |||||| ||||| |||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  23192817 tgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23192913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 25188272 - 25188368
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| |||||||| | |||||| ||||||||||||||| |||| | ||||||||||||||| |||| |||||||| ||||| | ||||||||    
T  25188272 tgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttcttcaagaaagcaacctgatagtgactca 25188368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 574
Target Start/End: Complemental strand, 33055139 - 33055038
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| || | |||||| ||||||||||||||||| ||  |||||||||| ||   ||||||||||||||||| |||| |||||    
T  33055139 ctgggctgttttatcctggaggcg-cacggttgatagtctaccttgcacaaactcgggtagtgccgtgattagtcttaaagaaagcgacatggttgtgac 33055041  T
Q  572 tca 574  Q
    |||    
T  33055040 tca 33055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 16035703 - 16035607
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  |||||| |||||||| |||||||  |||||||||||||||||||    
T  16035703 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggtcgtgactca 16035607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 16649613 - 16649708
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||| |||| ||||| ||||| ||||||| ||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  16649613 tgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtcgtgactca 16649708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 33301180 - 33301272
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| | ||||||||||||||    
T  33301180 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtga 33301272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 40166075 - 40165979
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||| ||| |||||  |||| |||||| |||||||||| || ||  |||||| |||||||||||||||| |||||| |||||||||||||    
T  40166075 tgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactca 40165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 47451225 - 47451321
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactta-ggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||||| ||||| ||||| ||||||  ||||||||| ||  || ||||||  ||||||||||||||| ||||||||||||||||||||    
T  47451225 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 47451321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 47455386 - 47455482
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  47455386 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 47455482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 37405908 - 37405954
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  37405908 catcactaagaatgataattttgttgggaaagggtacgccactgatg 37405954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 586 - 627
Target Start/End: Complemental strand, 27711315 - 27711274
Alignment:
Q  586 gtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  27711315 gtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 27711274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 539 - 579
Target Start/End: Original strand, 8267891 - 8267931
Alignment:
Q  539 gaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 579  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  8267891 gaaacgtcttaaagaaagcgacctggtcgtgactcaacccg 8267931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 10140184 - 10140088
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||| |||  |||| ||||| | |||| |||||||||| || | |||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  10140184 tgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgactca 10140088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 657 - 709
Target Start/End: Complemental strand, 17032033 - 17031981
Alignment:
Q  657 tgaggtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacat 709  Q
    ||||||| |||||||||||| |||||||||||||||||||||  |||||||||    
T  17032033 tgaggtggtgcggaggctgctcctcgtcgcaccaccaccattaagatctacat 17031981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 5728721 - 5728674
Alignment:
Q  11 catcactaagaatggtattttt-gttgggaaagggtacgccactgatg 57  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5728721 catcactaagaatgatattttttgttgggaaagggtacgccactgatg 5728674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 531 - 574
Target Start/End: Complemental strand, 25855213 - 25855170
Alignment:
Q  531 agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  25855213 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 25855170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 501 - 574
Target Start/End: Complemental strand, 3094187 - 3094113
Alignment:
Q  501 ggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3094113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 574
Target Start/End: Original strand, 4632958 - 4633022
Alignment:
Q  511 ctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||| || || ||||||||| |||||||||||||| |||||| | |||||||||||    
T  4632958 ctaccttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactca 4633022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 12260091 - 12259995
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||  |||||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| |||||||| ||||    
T  12260091 tgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacatggtcgtgtctca 12259995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 572
Target Start/End: Original strand, 39588370 - 39588461
Alignment:
Q  482 tttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 572  Q
    ||||||||||||  |||| ||| | ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||| ||||||||    
T  39588370 tttatcctggagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 39588461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 541 - 574
Target Start/End: Complemental strand, 16832133 - 16832100
Alignment:
Q  541 aacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||| ||||||||||||||||||||    
T  16832133 aacgtcttaaagagagcgacctggtcgtgactca 16832100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 506; Significance: 0; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 94 - 627
Target Start/End: Complemental strand, 17369199 - 17368666
Alignment:
Q  94 tatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagat 193  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369199 tatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagat 17369100  T
Q  194 cacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctc 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17369099 cacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggttttctctc 17369000  T
Q  294 ctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttc 393  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368999 ctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttc 17368900  T
Q  394 gaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggag 493  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  17368899 gaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggag 17368800  T
Q  494 acggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368799 acggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa 17368700  T
Q  594 gctctgtcgtaattttcaaattacaaatacaaca 627  Q
    ||||||||||||||||||||||||||| ||||||    
T  17368699 gctctgtcgtaattttcaaattacaaaaacaaca 17368666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 87 - 620
Target Start/End: Complemental strand, 55129276 - 55128743
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55129276 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaag-atggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 55129178  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55129177 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 55129078  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55129077 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacataccatattagagtg 55128978  T
Q  387 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 486  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  55128977 gtttttcgaaacttttcgaaaaccatgttgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttgaaatctgggctgttttat 55128878  T
Q  487 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 586  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| |    
T  55128877 cctggagacggcgcggttgctagtctaccttacacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca-cccgataattg 55128779  T
Q  587 tttcaaa--gctctgtcgtaattttcaaattacaaa 620  Q
    |||||||  |||||||||||||||||||||||||||    
T  55128778 tttcaaaaggctctgtcgtaattttcaaattacaaa 55128743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 54270986 - 54270609
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  54270986 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 54270891  T
Q  318 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |  |||||||||||||||||||||           ||||||||||||    
T  54270890 tgttgacgaaccgttcttttcttccctccttctttggtttctcgagtggtctgcaaaccatattagagtggtttttc-----------aaaaccatattg 54270802  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||    
T  54270801 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtttgaatctgaactgttttatcctggagacggcgcggttgctagtctacct 54270702  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54270701 tgcacaacttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 54270609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 34128923 - 34129299
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| ||||| |||||| | | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  34128923 tataaatagagaggtcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 34129018  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  34129019 tgttgacgaaccgttcttttcttcatccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 34129107  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  34129108 ggtgttattctcgagcgatttctggtggtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 34129207  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34129208 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcagcccggtaatagtttcaaagctctgtcgtaatttt 34129299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 4117345 - 4117730
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  4117345 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 4117440  T
Q  318 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||  ||||||||| ||||| ||    
T  4117441 tgttgacgaaccgttcttttcttccctccttctttggtttctcgagtggtctatgaaccatattacagtggtttttcgaa--ttttcgaaa-ccatactg 4117537  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  4117538 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacagcgcggttgctagtctacct 4117637  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  4117638 tgcacaacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtgactcaccccagtaatattttcgaagctccgtcgtaatttt 4117730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 219 - 614
Target Start/End: Original strand, 3482166 - 3482560
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||| ||||||||    |||||     
T  3482166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctccccttctcatctccctc----ggtttg 3482261  T
Q  318 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    |||||||||||||||||||  |||||||| | ||||| || || |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  3482262 tgttgacgaaccgttcttttcttcctcctctatttggattctcaagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 3482360  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  3482361 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 3482460  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 614  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||||  ||| ||||||||||||||| ||||    
T  3482461 tgcacaaattaggtaatgccgcgaaaagtcttaaagaaagcgacctggtcgtgactcactccgataattgtttcaaaaaactctgtcgtaatttttaaat 3482560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 17358179 - 17357801
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| | | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17358179 tataaatagagagctcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 17358084  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  17358083 tgttgacgaaccgttcttttcttcttccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 17357995  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  17357994 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 17357895  T
Q  518 g--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |  ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  17357894 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtgactcacctcggtaatagtttcaaagctttgtcgtaatttt 17357801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 219 - 614
Target Start/End: Original strand, 3476699 - 3477083
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||   |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  3476699 tataaatagagagctcgggaatgggattcttcactccaaaaacaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 3476794  T
Q  318 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  3476795 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 3476883  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  3476884 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 3476983  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 614  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  3476984 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctgtcgtaatttttaaat 3477083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 219 - 620
Target Start/End: Complemental strand, 10321784 - 10321396
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| | | ||||||||||||||||| |||||| |||| ||||| || ||||||||| ||| ||| ||||||||    |||||     
T  10321784 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaattgaatcctcttctcaggttttctccccttctcatctccctc----ggtttg 10321689  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  10321688 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 10321600  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgtttt-atcctggagacggcgcggttgctagtctacct 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||  |||||||||||||||||||    
T  10321599 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatggaatctgggctgtttttattctggagacaacgcggttgctagtctacct 10321500  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatta 616  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||||||||||||||||||||     
T  10321499 tgcacaatttaagtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactgatcctggtaataatttcaaagctctgtcgtaattttcaaattc 10321400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 1540 - 2002
Target Start/End: Complemental strand, 32238575 - 32238112
Alignment:
Q  1540 ttatgtagagcacgttgacgtgtatgagaattttgaaggagctaccttggatttggttagggaggtcaacaattcactggttctgaacattgtagtgaac 1639  Q
    |||||||||| | ||||||||| ||||||||||||| || ||||||||||||| |||||||||||| | |  ||  | |||||||||||||| |||||||    
T  32238575 ttatgtagagaatgttgacgtgcatgagaattttgatggcgctaccttggattcggttagggaggtgagctttttgccggttctgaacattggagtgaac 32238476  T
Q  1640 gaggaagacactgcctcttctaaagacatgccctcgaccatagttgttcatccacaccatattgcagtgcacaaagtccctacaacaccgattgatggtt 1739  Q
     |||||| |||||||| ||||||||||||| ||||  | | || ||| ||||||||||||||||| ||||||||||||| ||||||   | |||||||||    
T  32238475 aaggaagtcactgcctattctaaagacatggcctcagcaacagctgtgcatccacaccatattgcggtgcacaaagtccgtacaactttggttgatggtt 32238376  T
Q  1740 cagtcacaccagcctatgccattaattcggttctagaccc-gtcgcaacagtccctgcctttgttgcagactgggttctcatgaacagcaacatatgcac 1838  Q
    || |||||||||||||||||||||||||||||  |||||| ||| ||  ||||||||||||||||||||||| ||||||| |  ||||||||||| ||||    
T  32238375 caatcacaccagcctatgccattaattcggtttcagaccccgtcccagtagtccctgcctttgttgcagactcggttctcgtagacagcaacataggcac 32238276  T
Q  1839 acaaatcctgctgacagatgatgcagttccattagctgcggccagtgtgtttagctcggctcccgttgcaagttcattagccacgcatgaagttggtctt 1938  Q
     |||||||||||||| ||||||||| |||||  || |||| ||| ||||| ||||||| ||||| || |||||||||| | | |||||||||||||| ||    
T  32238275 gcaaatcctgctgactgatgatgcatttccaacagttgcgaccattgtgtctagctcgtctcccatttcaagttcattggtctcgcatgaagttggtatt 32238176  T
Q  1939 gtgcagcatagtaatccaaggattcaacatgctatggagctttgacagtgaatcaaagactata 2002  Q
    ||||| || |||||||||||||||||||||| |||||||||||  ||| | |||||||||||||    
T  32238175 gtgcaacacagtaatccaaggattcaacatgatatggagctttcgcagcggatcaaagactata 32238112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 61 - 336
Target Start/End: Original strand, 20090191 - 20090463
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  20090191 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaagtgtg 20090290  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20090291 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 20090390  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  20090391 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 20090463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 61 - 336
Target Start/End: Original strand, 20095316 - 20095588
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  20095316 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaagtgtg 20095415  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20095416 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 20095515  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  20095516 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 20095588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 87 - 336
Target Start/End: Original strand, 15762585 - 15762831
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15762585 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 15762684  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15762685 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 15762784  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  15762785 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 15762831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 87 - 336
Target Start/End: Original strand, 15767746 - 15767992
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15767746 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 15767845  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15767846 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 15767945  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  15767946 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 15767992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1633 - 2048
Target Start/End: Complemental strand, 32223321 - 32222905
Alignment:
Q  1633 agtgaacgaggaagacactgcctcttctaaagacatgccctcgaccatagttgttcatccacaccatattgcagtgcacaaagtccctacaacaccgatt 1732  Q
    |||||||||||||| ||||||||||||||||||||||||||   | |||||||| ||||||||||||||||| ||||||| ||||||||||||  || ||    
T  32223321 agtgaacgaggaagtcactgcctcttctaaagacatgccctaagcaatagttgtgcatccacaccatattgcggtgcacacagtccctacaacttcggtt 32223222  T
Q  1733 gatggttcagtcacaccagcctatgccattaattcggttctagaccc-gtcgcaacagtccctgcctttgttgcagactgggttctcatgaacagcaaca 1831  Q
    ||| ||||| |||||| ||||||| |||||| |||||||| |||||| ||| |   ||||||||||||||||||||||| ||||||| |  |||||| ||    
T  32223221 gattgttcaatcacactagcctataccattagttcggttccagaccccgtctcggtagtccctgcctttgttgcagactcggttctcgtagacagcagca 32223122  T
Q  1832 tatgcacacaaatcctgctgacagatgatgcagttccattagctgcggccagtgtgtttagctcggctcccgttgcaagttcattagccacgcatgaagt 1931  Q
    || ||||  |||||||||| |||||||||||||||||| |||||||||||| ||||| | ||||||||||| ||| ||||||||| | | |||| |||||    
T  32223121 taggcacgtaaatcctgcttacagatgatgcagttccagtagctgcggccattgtgtcttgctcggctcccattgaaagttcattggtctcgcaagaagt 32223022  T
Q  1932 tggtcttgtgcagcatagtaatccaaggattcaacatgctatggagctttgacagtgaatcaaagactataacaagagggcagctgaacctcctttcatt 2031  Q
    |||| |||| ||||| |||||||||||||||||||||| ||||||||||||  || | |||||||||||| |||||||||| |||||| ||||||||| |    
T  32223021 tggtattgttcagcacagtaatccaaggattcaacatgatatggagctttggtagcggatcaaagactatgacaagagggccgctgaagctcctttcact 32222922  T
Q  2032 cctgtcttgtctaaaaa 2048  Q
    | ||||||||| |||||    
T  32222921 catgtcttgtcaaaaaa 32222905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 165; E-Value: 2e-87
Query Start/End: Original strand, 408 - 627
Target Start/End: Original strand, 30341773 - 30341993
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||| || |||||||||    
T  30341773 accatattgaggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggtgcggttgct 30341872  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 607  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  30341873 agtctaccttacacaatttaggtagtgccgcgaaacgtcttaaagaaagtgacctggtcgtgactcaccccgataatactttcaaagctctgtcgtaatt 30341972  T
Q  608 tt-caaattacaaatacaaca 627  Q
    || |||||| |||| ||||||    
T  30341973 ttccaaattccaaaaacaaca 30341993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 408 - 616
Target Start/End: Original strand, 20090591 - 20090801
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  20090591 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 20090690  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  20090691 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 20090790  T
Q  606 ttttcaaatta 616  Q
    |||||||||||    
T  20090791 ttttcaaatta 20090801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 408 - 616
Target Start/End: Original strand, 20095716 - 20095926
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  20095716 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 20095815  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  20095816 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 20095915  T
Q  606 ttttcaaatta 616  Q
    |||||||||||    
T  20095916 ttttcaaatta 20095926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 147; E-Value: 1e-76
Query Start/End: Original strand, 408 - 620
Target Start/End: Original strand, 15762959 - 15763173
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  15762959 accatatcgaggtgtaattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 15763058  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  15763059 agtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 15763158  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  15763159 ttttcaaattacaaa 15763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 143; E-Value: 3e-74
Query Start/End: Original strand, 408 - 620
Target Start/End: Original strand, 15768120 - 15768334
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  15768120 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 15768219  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||   ||||| |    
T  15768220 agtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccagtaatagtttcaaaagcttcatcgtata 15768319  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  15768320 ttttcaaattacaaa 15768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 126; E-Value: 4e-64
Query Start/End: Original strand, 471 - 609
Target Start/End: Complemental strand, 17364168 - 17364028
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--acttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  17364168 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 17364069  T
Q  569 gactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17364068 gactcaccccggtaatagtttcaaagctctgtcgtaatttt 17364028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 123; E-Value: 2e-62
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 3481649 - 3481796
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481649 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 3481748  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3481749 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 3481796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 106; E-Value: 3e-52
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 34128437 - 34128558
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34128437 cttggagtatactagttgatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 34128536  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  34128537 ggtagatcacacactctagtag 34128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 98; E-Value: 2e-47
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 17358686 - 17358566
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  17358686 cttggattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaa-tagtgtaaagtgtgaattgaaaattttatgtcccacattg 17358588  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  17358587 ggtagatcacacactctagtag 17358566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 2e-47
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 30338126 - 30338247
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  30338126 cttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacattg 30338225  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  30338226 ggtagatcacacactctagtag 30338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 95; E-Value: 1e-45
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 30341204 - 30341351
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30341204 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 30341303  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  30341304 aattgaaaattttatggcccacattaggtagatcacacactctagtag 30341351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 5e-45
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 54271433 - 54271312
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||| |||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  54271433 cttgaagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtctaaagtgtgaattgaaaattttatgtcccacattg 54271334  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  54271333 ggtagatcacacactctagtag 54271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 7e-38
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 13022130 - 13022017
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||    
T  13022130 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtga 13022031  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  13022030 ctcaacccgataat 13022017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 7e-38
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 33089335 - 33089448
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  33089335 atctgagctgttttatcctagagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33089434  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  33089435 ctcaacccggtaat 33089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 4e-36
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 3476249 - 3476339
Alignment:
Q  118 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3476249 ttggaatgtaaacacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3476339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 4e-36
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 4117007 - 4117097
Alignment:
Q  118 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4117007 ttggaatgtaaacacaatgatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4117097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 2e-35
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 38436983 - 38437096
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | ||||||| ||||||||||||||||||| |||||| ||||||    
T  38436983 atctgggctgttttatcctggagacggcgtggttgttagtctacctttcacaacttggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtga 38437082  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  38437083 ctcaacccggtaat 38437096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-35
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 53119630 - 53119517
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    |||||| |||||||||||| ||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||    
T  53119630 atctggcctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtga 53119531  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  53119530 ctcaacccggtaat 53119517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 4e-33
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 20810475 - 20810362
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||||||||| | ||||||||||||||    
T  20810475 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtga 20810376  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  20810375 ctcaacccgataat 20810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 4e-33
Query Start/End: Original strand, 1541 - 1698
Target Start/End: Complemental strand, 32238741 - 32238584
Alignment:
Q  1541 tatgtagagcacgttgacgtgtatgagaattttgaaggagctaccttggatttggttagggaggtcaacaattcactggttctgaacattgtagtgaacg 1640  Q
    ||||||||||| ||||||||| ||||||||||||| ||   |||||||||||  ||||||||||| | |  ||| | |||||||||||||| ||||||||    
T  32238741 tatgtagagcatgttgacgtgcatgagaattttgatggcattaccttggattcagttagggaggtgagctcttcgccggttctgaacattggagtgaacg 32238642  T
Q  1641 aggaagacactgcctcttctaaagacatgccctcgaccatagttgttcatccacacca 1698  Q
    |||||| |||||||||||||||||||||||||||  | | |||||| |||||||||||    
T  32238641 aggaagtcactgcctcttctaaagacatgccctcagcaacagttgtgcatccacacca 32238584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 1e-30
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 26962162 - 26962049
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||  |||||||| |||||||||||||||| ||||| ||||||||||    
T  26962162 atctgtgctgttttatcctggagacggcgtgtttgttagtctaccttgcacaacttgtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtga 26962063  T
Q  571 ctcaccccggtaat 584  Q
    |||| ||| |||||    
T  26962062 ctcaacccagtaat 26962049  T

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Target: chr3; HSP #37
Raw Score: 65; E-Value: 1e-27
Query Start/End: Original strand, 478 - 585
Target Start/End: Original strand, 2617255 - 2617363
Alignment:
Q  478 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacc 576  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||  | | |||||||||||||||||||||||||||||||| |||| |||||||| |    
T  2617255 ctgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaac 2617354  T
Q  577 ccggtaata 585  Q
    || ||||||    
T  2617355 cctgtaata 2617363  T

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Target: chr3; HSP #38
Raw Score: 55; E-Value: 9e-22
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 21494300 - 21494398
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||| || || || || ||||||||| ||||||||||||||||||||    
T  21494300 gctgttttatcccggagacggcgcggttgttagtctaccttgcacaaacttgggtactgtcgtgatacatcttaaagagagcgacctggtcgtgactca 21494398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 758368 - 758464
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || || ||||||| |||||||||||||||| ||||| ||||||||||||||    
T  758368 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 758464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 23666123 - 23666219
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  23666123 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23666219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 24038371 - 24038467
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  24038371 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 24038467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 39775728 - 39775824
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  39775728 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39775824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 6e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 8069772 - 8069677
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || |  |||||| |||||||||||||||| ||||||||||||||||||||    
T  8069772 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaatttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 8069677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 10586177 - 10586286
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  10586177 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 10586275  T
Q  572 tcaccccggta 582  Q
    ||| |||||||    
T  10586276 tcaacccggta 10586286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 3672679 - 3672583
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  3672679 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 3692711 - 3692615
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  3692711 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 14438695 - 14438791
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| | |||| |||||||||| || || ||||||| ||||||||||||||||  |||||||||||||||||||    
T  14438695 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgactca 14438791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 18467318 - 18467222
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||  |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  18467318 tgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 18467222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 20520147 - 20520051
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| || |||||||||||||||||    
T  20520147 tgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgactca 20520051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 49971424 - 49971520
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| | ||| |||||| |||||||||| || || ||||||| |||||||||||||||| | ||||||||||||||||||    
T  49971424 tgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactca 49971520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 495 - 572
Target Start/End: Original strand, 1688902 - 1688980
Alignment:
Q  495 cggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 572  Q
    ||||||| ||| || |||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  1688902 cggcgcgattgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtcttaaagaaagcgacctggtcgtgact 1688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 3478439 - 3478485
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3478439 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 3478485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 15764511 - 15764557
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15764511 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15764557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 17362680 - 17362634
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17362680 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17362634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 17367322 - 17367276
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17367322 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17367276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 20092142 - 20092188
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20092142 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 20092188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 477 - 585
Target Start/End: Original strand, 27605133 - 27605242
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcac 575  Q
    ||||||||||||| ||| ||| |  |||| ||||||||||||||||| ||  |||||||| |||||| |||||||||| |||||| |||||||||||||     
T  27605133 gctgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactcaa 27605232  T
Q  576 cccggtaata 585  Q
    || |||||||    
T  27605233 cctggtaata 27605242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 30338506 - 30338595
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcc-tctcttctccctc 307  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| || |||| ||||||||    
T  30338506 tataaatagagagctcgggatttggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 30338595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 7571218 - 7571314
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| | ||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  7571218 tgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7571314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 479 - 573
Target Start/End: Complemental strand, 8883263 - 8883168
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactc 573  Q
    ||||||||||||||| | ||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| |||||||||||||||||||    
T  8883263 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactc 8883168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 528 - 574
Target Start/End: Original strand, 25726843 - 25726889
Alignment:
Q  528 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  25726843 ggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 25726889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 473 - 581
Target Start/End: Original strand, 795399 - 795508
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgca-caacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||  ||||  || |||| || | ||||||||| | ||||||  |||||||||||    
T  795399 ctgggctgttttatcctggaggcggcacggttgttagtctaccttgcataaactctggcagtgtcgtgcaacgtcttacataaagcggtctggtcgtgac 795498  T
Q  572 tcaccccggt 581  Q
    ||| ||||||    
T  795499 tcaacccggt 795508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 3033737 - 3033641
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||| ||| ||| | ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  3033737 tgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3033641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 3419088 - 3418992
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||| ||  |||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| |||||| |||||||||||||    
T  3419088 tgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcgtgactca 3418992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 12112641 - 12112733
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||| ||| | ||||| ||||||  |||||||||||| ||  |||||| |||||||||||||||| |||||||| |||||||    
T  12112641 tgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgtga 12112733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 18472100 - 18472005
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  ||||| |||||| || ||| || |||||| ||||||||||||||||||||    
T  18472100 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacg-aacatcgtaaagagagcgacctggtcgtgactca 18472005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 29350333 - 29350237
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||  ||| | | |||| |||||||||| || ||  |||||| ||||||||||||||||||||||| |||||||||||||    
T  29350333 tgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgtgactca 29350237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 686 - 740
Target Start/End: Original strand, 49359192 - 49359247
Alignment:
Q  686 caccaccaccatttggatctacatcgtgatgaatagt-gttggatttgaggaaaag 740  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  49359192 caccaccaccatttggatctacatcgtgataaatagtggttggatttgagggaaag 49359247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 481 - 549
Target Start/End: Complemental strand, 26706877 - 26706808
Alignment:
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctta 549  Q
    ||||||||||||| |||||| |||| ||||||||||||||| ||||| | |||||| |||||||||||||    
T  26706877 ttttatcctggaggcggcgcagttgttagtctaccttgcacaaacttggatagtgctgcgaaacgtctta 26706808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 32474680 - 32474774
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  || || |||||| |||||||||||  ||| ||||||||||||||| ||||    
T  32474680 tgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt--agagagcgacctggtcgtggctca 32474774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 8888023 - 8887927
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  |||||  | |||||||||||||| ||||||||||||||||||||    
T  8888023 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgactca 8887927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 12965873 - 12965969
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  ||||||   |||||||||||||| ||||||||||| ||||||||    
T  12965873 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggttgtgactca 12965969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 582
Target Start/End: Complemental strand, 31002771 - 31002689
Alignment:
Q  500 cggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 582  Q
    |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||| ||||||||||| |||||||    
T  31002771 cggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacct-gtcgtgactcaacccggta 31002689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 472 - 582
Target Start/End: Original strand, 45904442 - 45904552
Alignment:
Q  472 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||| || |  | |||||| ||||||||||||||||| || || |||||| | ||   |||||||||||| |||| |||||||||    
T  45904442 tctgggctgttttatcctgaaggca-cacggttgttagtctaccttgcacaatttcgggtagtgctgtgatttgtcttaaagaaaacgacatggtcgtga 45904540  T
Q  571 ctcaccccggta 582  Q
    |||| |||||||    
T  45904541 ctcaacccggta 45904552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 522 - 584
Target Start/End: Complemental strand, 6024171 - 6024109
Alignment:
Q  522 aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaat 584  Q
    |||||||||||||||||||||||||||||| | || ||||||||| ||| ||| ||| |||||    
T  6024171 aacttaggtagtgccgcgaaacgtcttaaaaagagagacctggtcatgaatcaacccagtaat 6024109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 25023929 - 25024003
Alignment:
Q  484 tatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagc 557  Q
    |||||||||| |||| |||||| ||||||||||||||| |||| |||||||| || ||||||||| || ||||||    
T  25023929 tatcctggaggcggcacggttgttagtctaccttgcacaaactgaggtagtgtcgtgaaacgtctcaaggaaagc 25024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 1741109 - 1741178
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtct 547  Q
    ||||||||||||||| ||||||||||| || | | |||||||| |||| |||||||| ||||||||||||    
T  1741109 tgttttatcctggaggcggcgcggttgttaatttgccttgcacaaactcaggtagtgtcgcgaaacgtct 1741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 29715737 - 29715641
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||| ||| ||||| ||||| |||||| ||| |||||| || ||  |||| | |||||||||||||| | ||||| ||||||||||||||    
T  29715737 tgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactca 29715641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 531 - 574
Target Start/End: Complemental strand, 27708918 - 27708875
Alignment:
Q  531 agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||| |||||||||||||||| | ||||||||||||||||||    
T  27708918 agtgccacgaaacgtcttaaagagaacgacctggtcgtgactca 27708875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 30341720 - 30341771
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcga 270  Q
    ||||||| |||||||||||| | | ||||||||||||||||| |||||||||    
T  30341720 tataaatagagagctcgggattgggattcttcactccaaaaccgagaatcga 30341771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 539 - 574
Target Start/End: Complemental strand, 53358277 - 53358242
Alignment:
Q  539 gaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||||||||||||||||| |||||||||    
T  53358277 gaaacgtcttaaagaaagcgacctggccgtgactca 53358242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 10321861 - 10321816
Alignment:
Q  244 attcttcactccaaaactgagaatcgaatactcttatctggttttc 289  Q
    ||||||||| ||||||| ||||||||||| ||||| ||||||||||    
T  10321861 attcttcaccccaaaaccgagaatcgaatcctcttctctggttttc 10321816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 27709029 - 27708988
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgca 520  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||    
T  27709029 tgttttatcctggaggcggcgtggttgatagtctaccttgca 27708988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 470; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 61 - 627
Target Start/End: Complemental strand, 40392832 - 40392266
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  40392832 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttgcaatgtaaacataaggatggagaaactagtgtaaagtgtg 40392733  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392732 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 40392633  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 360  Q
    ||||||||||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40392632 tgagaatcgaatacttttctctgattttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 40392533  T
Q  361 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392532 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 40392433  T
Q  461 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 560  Q
    ||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       
T  40392432 tacagttagaatttgggctgttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacagt 40392333  T
Q  561 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    ||||||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||| ||||||    
T  40392332 ctggtcgtgactcaccccgataatagtttcaaaattctatcgtaattttcaaattacaaaaacaaca 40392266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 87 - 627
Target Start/End: Original strand, 40518075 - 40518620
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40518075 cttggagtataatagtgagtttgtggagcctttggaatataaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 40518174  T
Q  187 gg-tagatcacacactctagtagaaatcctccttat----aaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatc 281  Q
    || |||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  40518175 gggtagatcacacactctagtagaaatcctccttattaataaattgagagctcgtgaatagtattcttcactccaaaactgagaatcgaatactcttctc 40518274  T
Q  282 tggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttcttt-ggtttatcgagtggtctacgtaccatatt 380  Q
    | ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  40518275 ttgttttctctcctctcttctccctccagcggtttgtgttgacgaaccgttctttctt-cctccttcttttggtttatcgagtggtctacgtaccatatt 40518373  T
Q  381 agagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctg 480  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  40518374 agagtggtttttcgaaactttttgaaaaccatattgaggtgttattctcgagcgatttttggcagtgcagcctttaatcgtacagttagaatctgggctg 40518473  T
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccgg 580  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40518474 ttttatcctggagacggcgcggttgctagtctaccttgcactatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccgg 40518573  T
Q  581 taatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 627  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  40518574 taatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 40518620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 259; E-Value: 1e-143
Query Start/End: Original strand, 219 - 627
Target Start/End: Original strand, 28751483 - 28751877
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  28751483 tataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 28751578  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||           |||||||||||||    
T  28751579 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttc-----------aaaaccatattga 28751667  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  28751668 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggtgcggttgcttgtctacctt 28751767  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 617  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28751768 gcacaacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaattac 28751867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 199; E-Value: 1e-107
Query Start/End: Original strand, 87 - 336
Target Start/End: Original strand, 42728175 - 42728421
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728175 cttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 42728274  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42728275 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 42728374  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  42728375 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 42728421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 88 - 291
Target Start/End: Original strand, 42723007 - 42723210
Alignment:
Q  88 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 187  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723007 ttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 42723106  T
Q  188 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttt 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42723107 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggttt 42723206  T
Q  288 tctc 291  Q
    ||||    
T  42723207 tctc 42723210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 44096842 - 44096596
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44096842 cttggagtatactagtgagtttgtggagcatttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44096743  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  44096742 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 44096643  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  44096642 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 44096596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 184; E-Value: 9e-99
Query Start/End: Original strand, 87 - 278
Target Start/End: Original strand, 44754161 - 44754352
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754161 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44754260  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754261 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 44754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 180; E-Value: 2e-96
Query Start/End: Original strand, 87 - 278
Target Start/End: Original strand, 44759327 - 44759518
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44759327 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44759426  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44759427 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 44759518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 169; E-Value: 8e-90
Query Start/End: Original strand, 90 - 278
Target Start/End: Complemental strand, 40520122 - 40519929
Alignment:
Q  90 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatc-ggg 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40520122 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggg 40520023  T
Q  189 tagatcacacactctagtagaaatcctcctt----ataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 278  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520022 tagatcacacactctagtagaaatcctccttatgaataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 40519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 155; E-Value: 2e-81
Query Start/End: Original strand, 408 - 620
Target Start/End: Original strand, 42723380 - 42723594
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  42723380 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 42723479  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  42723480 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 42723579  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  42723580 ttttcaaattacaaa 42723594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 155; E-Value: 2e-81
Query Start/End: Original strand, 408 - 620
Target Start/End: Original strand, 42728549 - 42728763
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  42728549 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 42728648  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  42728649 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 42728748  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  42728749 ttttcaaattacaaa 42728763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 155; E-Value: 2e-81
Query Start/End: Original strand, 408 - 628
Target Start/End: Complemental strand, 44096468 - 44096246
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44096468 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44096369  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  44096368 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 44096269  T
Q  606 ttttcaaattacaaatacaacac 628  Q
    |||| |||||||||| |||||||    
T  44096268 tttttaaattacaaaaacaacac 44096246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 408 - 620
Target Start/End: Original strand, 44754525 - 44754739
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44754525 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44754624  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  44754625 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 44754724  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  44754725 ttttcaaattacaaa 44754739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 408 - 620
Target Start/End: Original strand, 44759691 - 44759905
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44759691 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44759790  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  44759791 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 44759890  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  44759891 ttttcaaattacaaa 44759905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 3e-55
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 4162895 - 4163042
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||| ||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4162895 ggaacactggtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 4162994  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4162995 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 4163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 2e-50
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 28751021 - 28751168
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751021 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 28751120  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  28751121 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 28751168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 100; E-Value: 1e-48
Query Start/End: Original strand, 219 - 398
Target Start/End: Original strand, 4163331 - 4163507
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  4163331 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 4163426  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaac 398  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  4163427 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac 4163507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 7e-41
Query Start/End: Original strand, 474 - 584
Target Start/End: Complemental strand, 42914742 - 42914632
Alignment:
Q  474 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactc 573  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  42914742 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgactc 42914643  T
Q  574 accccggtaat 584  Q
    | |||| ||||    
T  42914642 aacccgctaat 42914632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 3e-34
Query Start/End: Original strand, 635 - 761
Target Start/End: Original strand, 36594228 - 36594355
Alignment:
Q  635 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaatagt-gttggatttga 733  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  36594228 ataggatgagggacgacagaggtgaggtgttgcggaggccgcgcctcatcgcaccaccatcatttggatctacatcgtgattaatagtggttggatttga 36594327  T
Q  734 ggaaaagcgaaaaccgaggtgtggtttt 761  Q
    ||||||| |||||| | |||||||||||    
T  36594328 ggaaaagggaaaacggcggtgtggtttt 36594355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 476 - 574
Target Start/End: Complemental strand, 5089376 - 5089278
Alignment:
Q  476 ggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||    
T  5089376 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactca 5089278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 6e-23
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 30658358 - 30658262
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || | |||||||| |||||||||||||||| ||||||||||||||||||||    
T  30658358 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 30658262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 9180724 - 9180820
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  9180724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9180820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 10160724 - 10160820
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  10160724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 10160820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 1934993 - 1935089
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  1934993 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 1935089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 9189803 - 9189899
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||| ||||||||||||||||    
T  9189803 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgactca 9189899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 18344526 - 18344430
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||  |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  18344526 tgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 18344430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 473 - 574
Target Start/End: Original strand, 11658882 - 11658984
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    |||| |||||||||| ||||| ||| || |||| ||||||||||||||||| || | ||||||||| |||| ||||||||||||||||| ||||| ||||    
T  11658882 ctggactgttttatcatggaggcggtgcagttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaagaaagcgacttggtcatgac 11658981  T
Q  572 tca 574  Q
    |||    
T  11658982 tca 11658984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 42724940 - 42724986
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42724940 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 42724986  T

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Target: chr2; HSP #29
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 44756092 - 44756138
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44756092 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 44756138  T

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Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 502 - 582
Target Start/End: Complemental strand, 19538458 - 19538377
Alignment:
Q  502 gttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 582  Q
    |||| |||||||||||||||||  | || |||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  19538458 gttgttagtctaccttgcacaaactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtcgtgactcaacccggta 19538377  T

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Target: chr2; HSP #31
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 582
Target Start/End: Original strand, 6297886 - 6297989
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 577  Q
    ||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||||| ||    
T  6297886 tgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacc 6297984  T
Q  578 cggta 582  Q
    |||||    
T  6297985 cggta 6297989  T

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Target: chr2; HSP #32
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 30651024 - 30650928
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||| ||||||||||||||    
T  30651024 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 30650928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 502 - 582
Target Start/End: Complemental strand, 28855077 - 28854996
Alignment:
Q  502 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 582  Q
    |||| |||||||||||| |||| ||| | |||||||| ||||||||||||||||||||||| ||| |||||||| |||||||    
T  28855077 gttgttagtctaccttgtacaaacttggatagtgccgtgaaacgtcttaaagaaagcgaccgggttgtgactcaacccggta 28854996  T

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Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 12797020 - 12796924
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||||||||| ||||| ||||||  |||| |||| || ||  |||||| | |||||||||||||| ||||| ||||||||||||||    
T  12797020 tgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggtcgtgactca 12796924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 19578414 - 19578510
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||| ||||||| | ||  ||||| |||||| |||||||||| || |||||||||| | |||||||||||||| ||||| ||||||||||||||    
T  19578414 tgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggtcgtgactca 19578510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 19892466 - 19892562
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||   |||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  19892466 tgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtcgtgactca 19892562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 25478297 - 25478393
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||| |||||| ||||| ||||| |||||| |||||||||| || ||  |||| | |||||||||||||||| ||||||||||| ||||||||    
T  25478297 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgtgactca 25478393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 25497325 - 25497421
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  ||||   |||||||||||||||| ||||||||||||||||||||    
T  25497325 tgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgactca 25497421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 31326834 - 31326738
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||||||  |||| ||||| |||||| |||||||||| || ||  |||| |  ||||||||||||||| ||||||||||||||||||||    
T  31326834 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtcgtgactca 31326738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 576 - 615
Target Start/End: Original strand, 4163525 - 4163564
Alignment:
Q  576 cccggtaatagtttcaaagctctgtcgtaattttcaaatt 615  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4163525 cccggtaatagtttcaaagctctgtcgtaattttcaaatt 4163564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 473 - 574
Target Start/End: Complemental strand, 39543004 - 39542901
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtct-accttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||| ||||||||||||| |   ||||||| |||||| ||||| ||||| || | ||||||||| ||||||||||||||| ||||||||| ||||||    
T  39543004 ctgggctattttatcctggaggcaatgcggttgttagtcttaccttacacaaactcatgtagtgccgtgaaacgtcttaaagagagcgacctgatcgtga 39542905  T
Q  571 ctca 574  Q
    ||||    
T  39542904 ctca 39542901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 481 - 574
Target Start/End: Complemental strand, 29677474 - 29677380
Alignment:
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||| ||||| ||||| |||||| | |||||||| || ||  |||||| |||||||||||||||| |||||| || ||||||||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactca 29677380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 574
Target Start/End: Complemental strand, 160137 - 160040
Alignment:
Q  478 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||  |||| || |||||||| ||| ||||||||||||| || || ||||| || ||||||| ||||||| ||||||||||||||| ||||    
T  160137 ctgttttatctcggaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctca 160040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 561
Target Start/End: Complemental strand, 28945266 - 28945181
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacc 561  Q
    ||||||||||||||||| |  |||||||| |||| |||||||||| ||||   ||||||||||||||||||||||| ||| |||||    
T  28945266 gctgttttatcctggaggcaacgcggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaaaaaatcgacc 28945181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 7737851 - 7737947
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  |||||||||  || || |||||| | |||| ||||||||| |||||| |||||||||||||    
T  7737851 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgtgactca 7737947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 570
Target Start/End: Complemental strand, 35602017 - 35601925
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  |||||| |||||||||||||| | ||||||||||||||||    
T  35602017 tgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtga 35601925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 574
Target Start/End: Original strand, 42926763 - 42926857
Alignment:
Q  483 ttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaac--gtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||| ||||| ||||| |||||||||||||||||  || || |||||| ||||||  |||||||||| |||| |||| ||||||||||    
T  42926763 ttatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagagcggcctgatcgtgactca 42926857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 578
Target Start/End: Complemental strand, 22844862 - 22844814
Alignment:
Q  530 tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacccc 578  Q
    ||||| || |||| ||||||||||||||||| |||||||||||||||||    
T  22844862 tagtggcgtgaaatgtcttaaagaaagcgacatggtcgtgactcacccc 22844814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 584
Target Start/End: Original strand, 29907368 - 29907470
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacccc 578  Q
    ||||||||||||||| |||||  |||| |||   ||||| ||||| ||   ||||| |||||||||||||||| | | |||||||||||||||| | |||    
T  29907368 tgttttatcctggaggcggcgtagttgatag---accttacacaattttaatagtgtcgcgaaacgtcttaaaaagatcgacctggtcgtgacttaaccc 29907464  T
Q  579 ggtaat 584  Q
    ||||||    
T  29907465 ggtaat 29907470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 584
Target Start/End: Original strand, 39542509 - 39542611
Alignment:
Q  483 ttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggt 581  Q
    ||||||||||| | |||| |||| ||||||||||| ||||| || | ||||||  | ||||||||||||||| || ||| | ||||||||||| || |||    
T  39542509 ttatcctggaggcagcgcagttgttagtctaccttacacaaattcaagtagtgttgtgaaacgtcttaaagagagtgacttagtcgtgactcaacctggt 39542608  T
Q  582 aat 584  Q
    |||    
T  39542609 aat 39542611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 219 - 614
Target Start/End: Original strand, 2234384 - 2234765
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  2234384 tataaatagagagctcgggattagtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 2234479  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  2234480 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 2234568  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  2234569 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 2234668  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 614  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2234669 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcaacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 2234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 219 - 627
Target Start/End: Original strand, 16539166 - 16539559
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||  ||| ||||| |||||||||||| | | ||| ||||||||    |||||     
T  16539166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctcccattctcatctccctc----ggtttg 16539261  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||           |||| |||    
T  16539262 tgttgacgaacagttcttttcttcctccttctttggtttctcgagtggtctacgtgtcatattagagtggtttttcgaaac-----------catactga 16539350  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  16539351 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 16539450  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16539451 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaa-cttcaaattac 16539549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 219 - 627
Target Start/End: Complemental strand, 16626496 - 16626103
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||  ||| ||||| |||||||||||| | | ||| ||||||||    |||||     
T  16626496 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctcccattctcatctccctc----ggtttg 16626401  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||           |||| |||    
T  16626400 tgttgacgaacagttcttttcttcctccttctttggtttctcgagtggtctacgtgtcatattagagtggtttttcgaaac-----------catactga 16626312  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  16626311 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 16626212  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16626211 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaa-cttcaaattac 16626113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 219 - 620
Target Start/End: Original strand, 21080793 - 21081182
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| | | |||||||||| |||||||||||||||||| ||||| |||||||||||| ||| ||| ||| ||||    |||||     
T  21080793 tataaatagagagctcgggatttgcattcttcacttcaaaactgagaatcgaatcctcttctctggttttctccccttctcatcttcctc----ggtttg 21080888  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||           ||||||||    
T  21080889 tgttgacgaaccgttcttttcttcctccttctttggtttcttaagtggtctacgtaccatattagagtggttttttgaaac-----------catattga 21080977  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21080978 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggtgcggttgctagtctacctt 21081077  T
Q  518 g--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 615  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21081078 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 21081177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 219 - 614
Target Start/End: Complemental strand, 42572286 - 42571904
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  42572286 tataaatagagaactcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 42572191  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||   ||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||           ||||||||    
T  42572190 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagtggtctacgaaccatatttgaatggtttttcgaaac-----------catattga 42572102  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  42572101 ggtgttattctcgagagatttctggcagtgcagcctttaattttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 42572002  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaattttcaaat 614  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  42572001 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaaagctccgtcgtaattttaaaat 42571904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 229; E-Value: 1e-125
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 12934738 - 12934363
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  12934738 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 12934643  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||| ||||||||||||  |||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||||||           ||||||||    
T  12934642 tgttgatgaaccgttcttttcttcctccttctttgttttctcgagtggtctacgaaccatatttgagtggtttttcgaaac-----------catattga 12934554  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  12934553 ggtgttattctcgagagatttctggcagtgcaacctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 12934454  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12934453 gcacaactcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca-cccggtaatagtttcaaagctctgtcgtaatttt 12934363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 224; E-Value: 1e-122
Query Start/End: Original strand, 219 - 614
Target Start/End: Complemental strand, 43893210 - 43892816
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  43893210 tataaatagagagctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 43893115  T
Q  318 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    |||||||||| ||||||||  |||||||  |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||  |    
T  43893114 tgttgacgaatcgttcttttcttcctcccctctttggtttctcgagtggtctacgtgccatactagagtggtttttcgaaacttttcgaaa-ccataccg 43893016  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||| |||||    
T  43893015 aggtgttattctcgagcgatttctagcagtgcaacctttaatcgtacagtaagaatctgagctgttttatcctggagacggcgcggttgctagtttacct 43892916  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 614  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||| ||||||||| ||||    
T  43892915 tgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattatttcaaaaagctctgacgtaatttttaaat 43892816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 17495744 - 17495367
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | |||||| |||||||||| |||||| |||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17495744 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctcgccttctcatctccctc----ggtttg 17495649  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||           ||||| ||    
T  17495648 tgttgacgaaccgttcttttcttcctccttctttggtttcttgagtggtctacgtaccatataagagtggttttttgaaac-----------catatgga 17495560  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17495559 ggtgttattctcgagcgatttctggcagtgctgcctttaatcgtacagtaagaatctgggctgttttatcttggagacggcgcggttgctagtctacctt 17495460  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaatttt 609  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17495459 gcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcacctcggtaatagtttcaaaagctctgtcgtaatttt 17495367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 17557470 - 17557847
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | |||||| |||||||||| |||||| |||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17557470 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctcgccttctcatctccctc----ggtttg 17557565  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||           ||||| ||    
T  17557566 tgttgacgaaccgttcttttcttcctccttctttggtttcttgagtggtctacgtaccatataagagtggttttttgaaac-----------catatgga 17557654  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17557655 ggtgttattctcgagcgatttctggcagtgctgcctttaatcgtacagtaagaatctgggctgttttatcttggagacggcgcggttgctagtctacctt 17557754  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaatttt 609  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17557755 gcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcacctcggtaatagtttcaaaagctctgtcgtaatttt 17557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 214; E-Value: 1e-116
Query Start/End: Original strand, 231 - 609
Target Start/End: Original strand, 32212419 - 32212784
Alignment:
Q  231 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 329  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||| ||||||| ||| ||| ||||||||    ||||| |||||| |||||    
T  32212419 gctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctgattttctccccttctcatctccctc----ggtttgtgttgatgaacc 32212514  T
Q  330 gttctttctttcctcctt-ctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 428  Q
    |||||||  ||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||           ||||||||||||||||| |    
T  32212515 gttcttttcttcctcctttctttggtttctcgagtggtcttcgtaccatattggagtggtttttcgaaac-----------catattgaggtgttatttt 32212603  T
Q  429 cgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag 528  Q
    ||||||||||||||||||||| |||||||||||||||   | ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  32212604 cgagcgatttctggcagtgcaacctttaatcgtacagaaagaatctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaatttag 32212703  T
Q  529 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32212704 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcataatttt 32212784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 61 - 336
Target Start/End: Complemental strand, 33238568 - 33238296
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238568 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 33238469  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238468 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 33238369  T
Q  261 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  33238368 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 33238296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 219 - 614
Target Start/End: Original strand, 19309365 - 19309746
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||| ||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  19309365 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcaaatcctcttctctggttttctccccttctcatctccctc----ggtttg 19309460  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||           ||||||||    
T  19309461 tgttgacgaactgttcttttcctcctccttctttggtttctcgagtggtctacgaaccatatttgactggtttttcgaaac-----------catattga 19309549  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
     |||||||||||||| |||||||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  19309550 agtgttattctcgagagatttctggcagtgcagcctttaatgttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 19309649  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaattttcaaat 614  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  19309650 gcacaacttaggtggtgccgcgaaacgtcttaaagacagcgacctggttg-gactcaccccggtaatagtttcaaaagctccgtcgtaattttaaaat 19309746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 47994340 - 47994094
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994340 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 47994241  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47994240 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 47994141  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  47994140 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 47994094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 202; E-Value: 1e-109
Query Start/End: Original strand, 61 - 291
Target Start/End: Complemental strand, 33243745 - 33243515
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33243745 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacacaaggatggagaaactagtgtaaagtgtg 33243646  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33243645 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 33243546  T
Q  261 tgagaatcgaatactcttatctggttttctc 291  Q
    |||||||||||||||||| ||||||||||||    
T  33243545 tgagaatcgaatactcttctctggttttctc 33243515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 47999515 - 47999269
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47999515 cttggagtatattagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtctcacatcg 47999416  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47999415 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 47999316  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  47999315 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 47999269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 183; E-Value: 4e-98
Query Start/End: Original strand, 383 - 614
Target Start/End: Original strand, 47177024 - 47177256
Alignment:
Q  383 agtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgtt 482  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||    
T  47177024 agtggtttttcgaaacttttcgaaa-ccatactgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgagctgtt 47177122  T
Q  483 ttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 582  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47177123 ttatcctgaagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 47177222  T
Q  583 atagtttc--aaagctctgtcgtaattttcaaat 614  Q
    || |||||  ||||||||||||||||||| ||||    
T  47177223 attgtttcaaaaagctctgtcgtaatttttaaat 47177256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 178; E-Value: 4e-95
Query Start/End: Original strand, 1540 - 2029
Target Start/End: Complemental strand, 2040959 - 2040476
Alignment:
Q  1540 ttatgtagagcacgttgacgtgtatgagaattttgaaggagctaccttggatttggttagggaggtcaacaattcactggttctgaacattgtagtgaac 1639  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||||||||| |||||||||||| | || ||| | |||||||||||||| |||||||    
T  2040959 ttatgtagagcacgtagacgtgcatgagaattttgatggtgctaccttggattcggttagggaggtgagcacttcgccggttctgaacattgcagtgaac 2040860  T
Q  1640 gaggaagacactgcctcttctaaagacatgccctcgaccatagttgttcatccacaccatattgcagtgcacaaagtccctacaacaccgattgatggtt 1739  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||  |||||| |||||||||||||| | | |||||||    
T  2040859 gaggaagtcactacctcttctaaagacatgccctcgaccacagttgtgcatccacaccatattgcgatgcacacagtccctacaacactggtagatggtt 2040760  T
Q  1740 cagtcacaccagcctatgccattaattcggttctaga-cccgtcgcaacagtccctgcctttgttgcagactgggttctcatgaacagcaacatatgcac 1838  Q
    ||||||||| |||||||||||||||||| |||  ||| ||| || |||||  | ||||||||| |||| ||| ||| | | |  |||||| | || |||     
T  2040759 cagtcacacaagcctatgccattaattcagtttcagaccccttcccaacaacctctgcctttgctgcatactcggtacccgtagacagcagcttaggcat 2040660  T
Q  1839 acaaatcctgctgacagatgatgcagttccattagctgcggccagtgtgtttagctcggctcccgttgcaagttcattagccacgcatgaagttggtct- 1937  Q
     |||||  |||||||||| ||||| ||          ||||||| | ||| ||||||||||||| ||||||||||||||||||| |||||||||||| |     
T  2040659 gcaaattgtgctgacagaggatgcggt---------cgcggccattatgtctagctcggctcccattgcaagttcattagccacacatgaagttggtatt 2040569  T
Q  1938 -tgtgcagcatagtaatccaaggattcaacatgctatggagctttgacagtgaatcaaagactataacaagagggcagctgaacctcctttca 2029  Q
     |||| | ||||||||||||||||||||||||| |||||||||||| ||| | |||||||| ||| ||||||||  || |||| |||||||||    
T  2040568 gtgtgtatcatagtaatccaaggattcaacatgatatggagctttggcagcggatcaaagattattacaagaggaaagttgaagctcctttca 2040476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 155; E-Value: 2e-81
Query Start/End: Original strand, 408 - 620
Target Start/End: Complemental strand, 33238168 - 33237954
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  33238168 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 33238069  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  33238068 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 33237969  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  33237968 ttttcaaattacaaa 33237954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 408 - 620
Target Start/End: Complemental strand, 33243345 - 33243131
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  33243345 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 33243246  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  33243245 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagtgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 33243146  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  33243145 ttttcaaattacaaa 33243131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 151; E-Value: 5e-79
Query Start/End: Original strand, 408 - 616
Target Start/End: Complemental strand, 47999141 - 47998931
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  47999141 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 47999042  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  47999041 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 47998942  T
Q  606 ttttcaaatta 616  Q
    |||||||||||    
T  47998941 ttttcaaatta 47998931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 149; E-Value: 7e-78
Query Start/End: Original strand, 408 - 618
Target Start/End: Complemental strand, 47993966 - 47993754
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  47993966 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 47993867  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||||  ||||| |    
T  47993866 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggttgtgactcatcccggtaatagtttcaaaagctccatcgtata 47993767  T
Q  606 ttttcaaattaca 618  Q
    |||||||||||||    
T  47993766 ttttcaaattaca 47993754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 111; E-Value: 3e-55
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 21080321 - 21080468
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080321 ggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21080420  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||    
T  21080421 aattgaaaattttatgtcccacgttgggtagatcacacactctagtag 21080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 106; E-Value: 3e-52
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 2233978 - 2234099
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  2233978 cttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 2234077  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  2234078 ggtagatcacacactctagtag 2234099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 98; E-Value: 2e-47
Query Start/End: Original strand, 507 - 628
Target Start/End: Original strand, 22857715 - 22857836
Alignment:
Q  507 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaat 606  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  22857715 tagtctaccttgcacaacttagatagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccggtaatagtttcaaagctctgtcataat 22857814  T
Q  607 tttcaaattacaaatacaacac 628  Q
    ||  |||||||||| |||||||    
T  22857815 ttgaaaattacaaaaacaacac 22857836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 3e-43
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 32211965 - 32212112
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32211965 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgttgagactttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 32212064  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  32212065 aattgaaaattttatgtctcacattgggtagatcacacactctagtag 32212112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 3e-43
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 42572747 - 42572600
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  42572747 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 42572648  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  42572647 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 42572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 90; E-Value: 1e-42
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 17496221 - 17496100
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17496221 cttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 17496122  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  17496121 ggtagatcacacactctagtag 17496100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 90; E-Value: 1e-42
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 17556993 - 17557114
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17556993 cttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 17557092  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  17557093 ggtagatcacacactctagtag 17557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 7e-41
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 12935231 - 12935084
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  12935231 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 12935132  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  12935131 aattgaaaattttatgtcccacattgggtagatcacacactttagtag 12935084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 87; E-Value: 7e-41
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 19308876 - 19309023
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  19308876 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 19308975  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  19308976 aattgaaaattttatgtcccacattggatagatcacacactctagtag 19309023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 86; E-Value: 3e-40
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 9973565 - 9973452
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||| ||||||||||||||||||||| ||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9973565 atctgggttgttttatcctggagacggcgtggttgttcgtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 9973466  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  9973465 ctcaacccggtaat 9973452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 47176496 - 47176643
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  47176496 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 47176595  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47176596 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 47176643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 78; E-Value: 2e-35
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 24528457 - 24528344
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||    
T  24528457 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtga 24528358  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  24528357 ctcaacccgataat 24528344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 78; E-Value: 2e-35
Query Start/End: Original strand, 471 - 572
Target Start/End: Complemental strand, 33226517 - 33226416
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33226517 atctgagctgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33226418  T
Q  571 ct 572  Q
    ||    
T  33226417 ct 33226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 16538699 - 16538813
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  16538699 cttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattg 16538798  T
Q  187 ggtagatcacacact 201  Q
     ||||||||||||||    
T  16538799 agtagatcacacact 16538813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 16626963 - 16626849
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  16626963 cttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattg 16626864  T
Q  187 ggtagatcacacact 201  Q
     ||||||||||||||    
T  16626863 agtagatcacacact 16626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 43893689 - 43893542
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||| ||||||||||    
T  43893689 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagcgtaaagtgtg 43893590  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43893589 aattgaaaattttatgtccctcattgggtagatcacacactctagtag 43893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 72; E-Value: 6e-32
Query Start/End: Original strand, 627 - 733
Target Start/End: Complemental strand, 5888458 - 5888351
Alignment:
Q  627 actactgaataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaatagt-gtt 725  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||||||||| |||    
T  5888458 actaccgaatatgatgagggacgccggaggtgaggtgatgcggaggccgcgcctcgtcgccccaccaccaattggatttacatcgtgatgaatagtggtt 5888359  T
Q  726 ggatttga 733  Q
    ||||||||    
T  5888358 ggatttga 5888351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 1e-30
Query Start/End: Original strand, 471 - 584
Target Start/End: Original strand, 28292496 - 28292607
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||    
T  28292496 atctgggctgttt-atcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtga 28292593  T
Q  571 ctcaccccggtaat 584  Q
    || | |||||||||    
T  28292594 cttaacccggtaat 28292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 9e-22
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 47544749 - 47544828
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgg 140  Q
    |||||||||||||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47544749 ggaacactagtgtataatgaaaaaaacttggagtatactagagagtttgtggagcctttggaatgtaaacacaaggatgg 47544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 4579603 - 4579507
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  4579603 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 4579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 481 - 574
Target Start/End: Original strand, 3357634 - 3357728
Alignment:
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggta-gtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||| ||||||||||| ||||| |||||| ||||||||||||| ||   || ||||||||||||||||||| ||||||||||||||||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactca 3357728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 473 - 582
Target Start/End: Complemental strand, 27256343 - 27256234
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  27256343 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 27256245  T
Q  572 tcaccccggta 582  Q
    ||| |||||||    
T  27256244 tcaacccggta 27256234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 479 - 583
Target Start/End: Complemental strand, 8076145 - 8076040
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 577  Q
    ||||||||||||||| | ||| ||||| ||||||  ||||||||| || ||| |||||| |||||||||||||||| |||||||||||||||||||| ||    
T  8076145 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 8076046  T
Q  578 cggtaa 583  Q
    | ||||    
T  8076045 cagtaa 8076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 9650967 - 9651063
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  9650967 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9651063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 23246933 - 23247029
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||| ||||||||| ||||||||||||||||||||    
T  23246933 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactca 23247029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 23866163 - 23866067
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  23866163 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23866067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 26341294 - 26341198
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| ||||| |||||||||| ||||||||||||||||||||    
T  26341294 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 26341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 635 - 706
Target Start/End: Original strand, 36935090 - 36935161
Alignment:
Q  635 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatcta 706  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| || |||| |||||||||    
T  36935090 ataggatgagggatgccggaggtgaggtgatgcggaggccgcgcctcgtcgcacgactaccaattggatcta 36935161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 33241778 - 33241732
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33241778 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 33241732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 47997575 - 47997529
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  47997575 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 47997529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 479 - 583
Target Start/End: Complemental strand, 12254174 - 12254069
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 577  Q
    |||||||||||| || ||||| | ||| |||||| ||||||||||||| ||| |||||| | |||| ||||||||| ||||||||||||| |||||| ||    
T  12254174 tgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacctggtcgcgactcaacc 12254075  T
Q  578 cggtaa 583  Q
     |||||    
T  12254074 tggtaa 12254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 47176904 - 47176993
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcc-tctcttctccctc 307  Q
    ||||||| ||||||||||||||   ||||||||||||||||| || |||||||| ||||| |||||||||||| || |||| ||||||||    
T  47176904 tataaatagagagctcgggaatgagattcttcactccaaaaccgataatcgaatcctcttctctggttttctccccttctcatctccctc 47176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 4930328 - 4930232
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||| |  ||| ||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  4930328 tgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 4930232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 13314236 - 13314332
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| || || || || ||||||||||||||||| || ||  ||| || |||||||||||||||| ||||| ||||||||||||||    
T  13314236 tgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggtcgtgactca 13314332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 44423137 - 44423233
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| |||||  |||| |||||| ||||| |||| || ||| |||||| |||||||||||||||| ||||| ||| ||||||||||    
T  44423137 tgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgatcgtgactca 44423233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 10388367 - 10388461
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| |||||  |||| | ||||| | |||||||||| || | |||| | |||||||||||||| ||||||||||||||||||||    
T  10388367 tgttttatcctggaggcggcgttgttgat-gtctatcatgcacaacttgggcaatgccacaaaacgtcttaaagagagcgacctggtcgtgactca 10388461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 8268388 - 8268292
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| |||||  |||| ||||| ||||||  ||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  8268388 tgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 8268292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 44510677 - 44510773
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| | |||||||||||||| ||| | ||||||||||||||    
T  44510677 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgactca 44510773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 19640395 - 19640298
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||||| || | |||||  ||||||||||||||||| ||  |||| || || |||||||||||||||||| ||| || ||||||||||    
T  19640395 gctgttttatcctggaggcg-cacggttcttagtctaccttgcacaaactcgggtaatgtcgtgaaacgtcttaaagaaagagacatgatcgtgactca 19640298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 582
Target Start/End: Original strand, 40865351 - 40865456
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcac 575  Q
    ||||||||||||||||| |  | |||||| ||||||||||||||||| || | ||||||||| ||    ||||||||||||| ||||||| ||||||||     
T  40865351 gctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgagtagtgccgtgatttatcttaaagaaagcaacctggttgtgactcaa 40865449  T
Q  576 cccggta 582  Q
    |||||||    
T  40865450 cccggta 40865456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 27238337 - 27238241
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| || || ||||| | ||| |||||| |||| ||||| || | | |||||| | |||||||||||||| ||||||||||||||||||||    
T  27238337 tgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 27238241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 42627214 - 42627289
Alignment:
Q  496 ggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    |||| ||||| |||||| | |||||||| || || | ||||| |||||||||||||||| ||||||||||||||||    
T  42627214 ggcgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtga 42627289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 574
Target Start/End: Complemental strand, 16372443 - 16372397
Alignment:
Q  528 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| |||||| ||||||||| |||||| |||||||||||||    
T  16372443 ggtagtgccacgaaacatcttaaagagagcgacttggtcgtgactca 16372397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 255; Significance: 1e-141; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 219 - 627
Target Start/End: Original strand, 8962 - 9356
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| ||| |||||||| ||| ||| ||||||||    |||||     
T  8962 tataaatagagagctcgggaatgggattcttcactccaaaaacgagaatcgaatcctcttctctagttttctccccttctcatctccctc----ggtttg 9057  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    ||||||||||| |||||||  ||||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||           ||||||||    
T  9058 tgttgacgaactgttcttttcttcctccttgtttggtttctcgagtggtttgcgtaccatattagagtggtttttcgaaac-----------catattga 9146  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9147 ggtgttattctcgagcaatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtcttcctt 9246  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9247 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 99; E-Value: 5e-48
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 8534 - 8681
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8534 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8633  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8634 aatttaaaattttatgtcccacattgggtagatcacacactctagtag 8681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 251; Significance: 1e-138; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 251; E-Value: 1e-138
Query Start/End: Original strand, 209 - 629
Target Start/End: Complemental strand, 37361 - 36956
Alignment:
Q  209 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 307  Q
    ||||||||  ||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||| ||||    
T  37361 aaatcctctctataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatcttcctc 37262  T
Q  308 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 407  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||             
T  37261 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggttttttgaaac--------- 37175  T
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
      ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||    
T  37174 --catattgaggtgttattctcgagcgatttttggcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgct 37077  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 607  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  37076 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccagtaatagtttcaaagctctgtcgtaa-t 36978  T
Q  608 ttcaaattacaaatacaacact 629  Q
    ||||||||||||| ||||||||    
T  36977 ttcaaattacaaaaacaacact 36956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 37712 - 37654
Alignment:
Q  150 tgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37712 tgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactccagtag 37654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 47851 - 47960
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||| ||| |  | |||||| ||||||||||||||||| || || |||||||  ||   |||||| |||||||||||||||||||||    
T  47851 ctgggctgttttatccttgaggca-cacggttgttagtctaccttgcacaattttgggtagtgccctgatttgtcttatagaaagcgacctggtcgtgac 47949  T
Q  572 tcaccccggta 582  Q
    ||| |||||||    
T  47950 tcaacccggta 47960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 219 - 620
Target Start/End: Original strand, 21643835 - 21644222
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| | | ||||||||    |||||     
T  21643835 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttcccatctccctc----ggtttg 21643930  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||||           ||||||||    
T  21643931 tgttgatgaaccgttctttttttcctccttctttggtttctcgagtggtctgcgtaccatattatagtggcttttcgaaac-----------catattga 21644019  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||    
T  21644020 ggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagtcggcgcggttgctagtctacctt 21644119  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  21644120 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgattcaccccggtaatactttcaaagctctgtcgtaattttcaaattac 21644219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 209 - 627
Target Start/End: Complemental strand, 24885064 - 24884660
Alignment:
Q  209 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 307  Q
    ||||||||  ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  24885064 aaatcctctctataaatagagagctcgggaatggaattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 24884965  T
Q  308 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 407  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||             
T  24884964 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac--------- 24884878  T
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgtttt-atcctggagacggcgcggttgc 506  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||||||||||||||| ||||||    
T  24884877 --catattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagaaataatctgggctgtttttatcctggagacggcgtggttgc 24884780  T
Q  507 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaat 606  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||     
T  24884779 tagtctaccttgcacaacttaggtagtgccgcaaaacgtcttaaagaaagctacctggtcgtgactcaccccggtaatagtttcaaagctctgccgtaa- 24884681  T
Q  607 tttcaaattacaaatacaaca 627  Q
    |||||||||||||| ||||||    
T  24884680 tttcaaattacaaaaacaaca 24884660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 305 - 609
Target Start/End: Original strand, 17955626 - 17955919
Alignment:
Q  305 ctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcg 404  Q
    ||||| |||||| |||||||||| ||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||          
T  17955626 ctccctcggtttgtgttgacgaatcgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac------ 17955719  T
Q  405 aaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggtt 504  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  17955720 -----catattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggtt 17955814  T
Q  505 gctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgta 604  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17955815 gctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgta 17955914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 217; E-Value: 1e-118
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 43998984 - 43999360
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||| |   |||||| |||| ||||||||||||||||| ||||| |||| ||||||| ||| ||| ||||||||    |||||     
T  43998984 tataaatagagagctcgggatttacattctttactctaaaactgagaatcgaatcctcttctctgattttctccccttctcatctccctc----ggtttg 43999079  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  43999080 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 43999168  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 517  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  43999169 ggtgttattctcgagcgatttttggtagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcagttgctagtctacctt 43999268  T
Q  518 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  43999269 gcacaatttaggtagtgccgcgaaacgttttaaagaaaacgacctgatcgtgactcaacccagtaatagtttcaaagctctgtcgtaatttt 43999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 339 - 620
Target Start/End: Original strand, 42514245 - 42514515
Alignment:
Q  339 ttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgattt 438  Q
    |||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  42514245 ttcctccttctttgttttctcgagtggtctgcgtactatattagagtggtttttcgaaac-----------catattgaggtgttattctcgagcgattt 42514333  T
Q  439 ctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgc 538  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42514334 ctggcagtgcagcctttaatcgtacagtttgaacctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgc 42514433  T
Q  539 gaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 620  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42514434 gaaacgtcttaaagaaagcgacctggtcatgactcaccccggtaatagttttaaagctctgtcgtaattttcaaattacaaa 42514515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 199; E-Value: 1e-107
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 32011066 - 32010820
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32011066 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 32010967  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32010966 ggtagatcatacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 32010867  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  32010866 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 32010820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 32016240 - 32015994
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32016240 cttggagtatactagtgaatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 32016141  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32016140 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 32016041  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  32016040 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 32015994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 192; E-Value: 1e-103
Query Start/End: Original strand, 61 - 316
Target Start/End: Original strand, 2165394 - 2165650
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttgg-aatgtaaacacaaggatggagaaactagtgtaaagtgt 159  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  2165394 ggaacactagtgtataatgaaaaaattttggagtatactagtgagtttgtggagtctttgggaatgtaaacacaaggatggagaaactagtgtaaagtgt 2165493  T
Q  160 gaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaa 259  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2165494 gaattgaaaattttatgtctcacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaa 2165593  T
Q  260 ctgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggttt 316  Q
     |||||||| ||| ||||| ||| |||||||||| ||||||||||||||||||||||    
T  2165594 ttgagaatcaaatgctcttctctagttttctctcatctcttctccctcccgcggttt 2165650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 8e-81
Query Start/End: Original strand, 408 - 627
Target Start/End: Complemental strand, 32015866 - 32015645
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  32015866 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 32015767  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  32015766 agtctaccttgcacaattcaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 32015667  T
Q  606 ttttcaaattacaaatacaaca 627  Q
    ||||||||||||||| ||||||    
T  32015666 ttttcaaattacaaaaacaaca 32015645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 132; E-Value: 1e-67
Query Start/End: Original strand, 1540 - 1979
Target Start/End: Complemental strand, 33957273 - 33956815
Alignment:
Q  1540 ttatgtagagcacgttgacgtgtatgagaattttgaaggagctaccttggatttggttagggaggtcaacaattcactggttctgaacattgtagtgaac 1639  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||| | |  |||    || ||||||||||||||| ||    
T  33957273 ttatgtagagcacgttgacgtgcatgagaattttgatggtgctaccttggattcggttagggaggtgagctcttcggcagtgctgaacattgtagtgcac 33957174  T
Q  1640 gaggaagacactgcctcttctaaagacatgccctcgaccatagttgttcatccacaccatattgcagtgcacaaagtccctacaacaccgattgatggtt 1739  Q
    ||||||| ||||||||||||||||||||| |||||  ||| |||||| ||||||||| ||||||  ||||||| |||||||||||| ||| | |||||||    
T  33957173 gaggaagtcactgcctcttctaaagacattccctcatccacagttgtgcatccacacaatattgtggtgcacacagtccctacaaccccgttggatggtt 33957074  T
Q  1740 cagtcacaccagcctatgccattaattcggttctaga-cccgtcgcaacagtccctgcctttgttgcagactgggttctcatgaacagcaacatatgcac 1838  Q
    |||| |||||| | | |  ||||| |||||||| ||| ||| || ||  | ||||||||||||||||||||| ||||| | || ||||||||||| ||||    
T  33957073 cagttacaccaacttgtctcattacttcggttccagaccccatcccagtaatccctgcctttgttgcagacttggttcccgtggacagcaacataggcac 33956974  T
Q  1839 ac------------------aaatcctgctgacagatgatgcagttccattagctgcggccagtgtgtttagctcggctcccgttgcaagttcattagcc 1920  Q
    ||                  || || ||||||||||||||| ||| |||  || || ||||| ||||| ||||| |||||    ||||||||||||||||    
T  33956973 acaactcttgctgacagatgaactcttgctgacagatgatgtagtaccagcagttgtggccattgtgtctagcttggctctgactgcaagttcattagcc 33956874  T
Q  1921 acgcatgaagttggtcttgtgcagcatagtaatccaaggattcaacatgctatggagct 1979  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||| |||| ||||    
T  33956873 acgcatgaagttggtattgtgcagcacaataatccaaggattcaacatgatatgaagct 33956815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 6e-60
Query Start/End: Original strand, 219 - 493
Target Start/End: Original strand, 21643395 - 21643652
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    | |||     
T  21643395 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----gatttg 21643490  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 417  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||           ||||||||||||    
T  21643491 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggcttttcg-----------aaaccatattga 21643579  T
Q  418 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggag 493  Q
    |||||||||||||||||||||   |||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  21643580 ggtgttattctcgagcgattt---gcagtgcaacctttaatcgtacagttagaatctgggctgttttatcctggag 21643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 3e-55
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 43998546 - 43998693
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43998546 ggaacactagtgtataatgaaaaaaacttggagtatactagttggtttgtggagcctttgaaatgtaaacacaaggatggagaaactagtgtaaagtgtg 43998645  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  43998646 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 43998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 2e-50
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 17955134 - 17955281
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||||||       ||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17955134 ggaacactagtgtataatggaaaagacttagagtatactagttgttttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtgaagtgtg 17955233  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17955234 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 17955281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 5e-45
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 24885445 - 24885324
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  24885445 cttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 24885346  T
Q  187 ggtagatcacacactctagtag 208  Q
    ||||||||||||||||||||||    
T  24885345 ggtagatcacacactctagtag 24885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 1e-42
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 19430117 - 19430004
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19430117 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19430018  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  19430017 ctcaacccggtaat 19430004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-42
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 19435619 - 19435506
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19435619 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19435520  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  19435519 ctcaacccggtaat 19435506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 1e-42
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 19566266 - 19566153
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19566266 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19566167  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  19566166 ctcaacccggtaat 19566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 1e-42
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 19571768 - 19571655
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19571768 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19571669  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||||||||    
T  19571668 ctcaacccggtaat 19571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 2e-41
Query Start/End: Original strand, 471 - 574
Target Start/End: Original strand, 33616719 - 33616822
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  33616719 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33616818  T
Q  571 ctca 574  Q
    ||||    
T  33616819 ctca 33616822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 4e-39
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 21641520 - 21641684
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21641520 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21641615  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21641616 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 4e-39
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 21641895 - 21642059
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21641895 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21641990  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21641991 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 4e-39
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 21642270 - 21642434
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21642270 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21642365  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21642366 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 4e-39
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 21643020 - 21643184
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  21643020 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 21643115  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21643116 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 42513848 - 42513995
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||    
T  42513848 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaaatagtgtaaagtgtg 42513947  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  42513948 aattgaaaattttatgtcccacattggatagatcacacactctagtag 42513995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 1e-36
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 21642645 - 21642809
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  21642645 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 21642740  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 386  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21642741 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 2e-35
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 31030631 - 31030518
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| || || ||||||| |||||||||||||||||| ||||||||||||||||    
T  31030631 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcataatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtga 31030532  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  31030531 ctcaacccgataat 31030518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 76; E-Value: 3e-34
Query Start/End: Original strand, 635 - 761
Target Start/End: Original strand, 20519763 - 20519890
Alignment:
Q  635 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaatagt-gttggatttga 733  Q
    ||||||||||| || |||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  20519763 ataggatgaggaacaccggaggtaaggtgatgcggaggccgcgcctcgtcgcaccaccaccatttggatctacattgtgatgaatagtggttggatttga 20519862  T
Q  734 ggaaaagcgaaaaccgaggtgtggtttt 761  Q
    || |||| | |||| | |||||||||||    
T  20519863 gggaaaggggaaacggtggtgtggtttt 20519890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 2e-29
Query Start/End: Original strand, 635 - 761
Target Start/End: Complemental strand, 38148759 - 38148632
Alignment:
Q  635 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaat-agtgttggatttga 733  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||| |||||||||| |||||||||||||||||||||| ||| |  |||||||||||    
T  38148759 ataggatgagggacgccggaggtgaggtgatgcggaggccgcacctcatcgcaccaccgccatttggatctacatcgtgattaataacggttggatttga 38148660  T
Q  734 ggaaaagcgaaaaccgaggtgtggtttt 761  Q
    ||||||| | ||||   |||||||||||    
T  38148659 ggaaaaggggaaacgatggtgtggtttt 38148632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 6e-29
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 21641184 - 21641273
Alignment:
Q  118 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21641184 ttggaatgtaaatacaaggatgtagat-ctagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 21641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 517 - 627
Target Start/End: Complemental strand, 32010595 - 32010483
Alignment:
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-attttcaaat 614  Q
    ||||||| | |||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||| |||||||  ||||| ||||||||||    
T  32010595 tgcacaattcaggtagtgccgcgaaatgtcttaaaaagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtatattttcaaat 32010496  T
Q  615 tacaaatacaaca 627  Q
    |||||| ||||||    
T  32010495 tacaaaaacaaca 32010483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 478 - 584
Target Start/End: Complemental strand, 13584454 - 13584340
Alignment:
Q  478 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg--------tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 569  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| ||        |||||||||||||||||||||||| |||||||||||||||    
T  13584454 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 13584355  T
Q  570 actcaccccggtaat 584  Q
    | ||| || ||||||    
T  13584354 attcaacctggtaat 13584340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 31449866 - 31449962
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  31449866 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31449962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 38182237 - 38182333
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| || ||| |||||||||| ||| || |||||| |||||||| ||||||| ||||||||||||||||||||    
T  38182237 tgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 38182333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 44925923 - 44926019
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||| ||||||| ||||||||||||||||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 44926019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 21645574 - 21645620
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21645574 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 21645620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 32014301 - 32014255
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32014301 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 32014255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 15875668 - 15875764
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  || || |||||| ||||||||| |||||| |||||||||||||| |||||    
T  15875668 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgtaactca 15875764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 19166729 - 19166633
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| || ||||||| || ||  |||||| |||||||||||||||| |||||| |||||||||||||    
T  19166729 tgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactca 19166633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 8e-16
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 40125885 - 40125981
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||| ||||||||||||||    
T  40125885 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 40125981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 462
Target Start/End: Complemental strand, 32010659 - 32010605
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgta 462  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  32010659 accatatcgaggtgtcattctcgagcgatttctggcagtgtagcctttaatcgta 32010605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 17026030 - 17025934
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaac-ttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| || || | ||| ||||||  |||||||||  || || |||||| |||||||||||||||| ||||||||||||||||||||    
T  17026030 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 17025934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 17556522 - 17556426
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaac-ttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| || || | ||| ||||||  |||||||||  || || |||||| |||||||||||||||| ||||||||||||||||||||    
T  17556522 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 17556426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 18876367 - 18876462
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| ||||||  |||||||||  || || |||||| |||||||||||||| | ||||||||||||||||||||    
T  18876367 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 18876462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 24090722 - 24090626
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||||| || || | ||| || ||| ||||||||||||| ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  24090722 tgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 24090626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 33416642 - 33416546
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| | ||||||||||||||||||    
T  33416642 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgactca 33416546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 42514182 - 42514245
Alignment:
Q  227 gagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttct 290  Q
    ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  42514182 gagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttct 42514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 481 - 574
Target Start/End: Complemental strand, 1807565 - 1807471
Alignment:
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||| ||||| ||||| |||||| |||||||||| || ||  |||| | |||||||||||||||| |||||||| |||||||||||    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactca 1807471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 576
Target Start/End: Complemental strand, 2965725 - 2965627
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacc 576  Q
    ||||||||||| ||| ||| | ||||| |||| |  ||||||||| || ||| |||||| |||||||| ||||||| ||||||||||||||||||||||    
T  2965725 tgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactcacc 2965627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 473 - 574
Target Start/End: Complemental strand, 37771812 - 37771711
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||| ||||||||||||||| |  | |||||| ||||||||||| ||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  37771812 ctgggttgttttatcctggaggca-cacggttgttagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 37771714  T
Q  572 tca 574  Q
    |||    
T  37771713 tca 37771711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 43302718 - 43302815
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa--cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||   || |  |||||| |||||||||||||||| | ||||| |||||| |||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgtaactca 43302815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 17953873 - 17953969
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||| ||||| ||||| ||||| || |||  ||||||||| || ||  |||||| ||||||||||||||||||||||| ||||||| |||||    
T  17953873 tgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgttactca 17953969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 34118561 - 34118465
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||||  || || || ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  34118561 tgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 34118465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 36683674 - 36683578
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| | ||| ||||| |||||| |||| ||||| || ||  |||||| |||||||||||||||| |||||||| ||| |||||||    
T  36683674 tgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtcatgactca 36683578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 531 - 574
Target Start/End: Original strand, 40130739 - 40130782
Alignment:
Q  531 agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  40130739 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 40130782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 572
Target Start/End: Original strand, 1910969 - 1911063
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 572  Q
    |||||||| |||||| | ||| ||||| |||||| | |||||||| || |  ||||||| |||||||||||||||| ||||||||| ||||||||    
T  1910969 tgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 1911063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 574
Target Start/End: Original strand, 28559656 - 28559750
Alignment:
Q  481 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    |||||||||| |||||||| ||||| |||| | |||||||||| || ||  |||||| |||||||||||| ||| |||||| | |||||||||||    
T  28559656 ttttatcctgcagacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagagcgacattgtcgtgactca 28559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 574
Target Start/End: Original strand, 34818726 - 34818794
Alignment:
Q  507 tagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||||| || || ||||| || ||   |||||||||||||||||||||||||||||||    
T  34818726 tagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaagaaagcgacctggtcgtgactca 34818794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 579
Target Start/End: Original strand, 25367991 - 25368093
Alignment:
Q  477 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcac 575  Q
    ||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||| || ||   |||||||| |||| |||||||||||||||||     
T  25367991 gctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaaaaaagtgacctggtcgtgactcaa 25368089  T
Q  576 cccg 579  Q
    ||||    
T  25368090 cccg 25368093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 574
Target Start/End: Original strand, 4238337 - 4238411
Alignment:
Q  501 ggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||| |||||| |||||||||| || ||  ||||||  ||||||| ||||||| ||||||||||||||||||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactca 4238411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 574
Target Start/End: Original strand, 4243076 - 4243150
Alignment:
Q  501 ggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||| |||||| |||||||||| || ||  ||||||  ||||||| ||||||| ||||||||||||||||||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactca 4243150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 655 - 696
Target Start/End: Complemental strand, 9518476 - 9518434
Alignment:
Q  655 gatgaggtgatgcggaggct-gcgcctcgtcgcaccaccacca 696  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  9518476 gatgaggtgatgcggagggttgcgcctcgtcgcaccaccacca 9518434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 541 - 574
Target Start/End: Original strand, 15951584 - 15951617
Alignment:
Q  541 aacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||| ||||||||||||||||||||    
T  15951584 aacgtcttaaagagagcgacctggtcgtgactca 15951617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 1463 - 1508
Target Start/End: Complemental strand, 33957369 - 33957324
Alignment:
Q  1463 cgatgatgtgaaccctcttgaagtggagagaacgcagcaggaatct 1508  Q
    |||||| ||| ||||||||||||| ||||||||||| |||||||||    
T  33957369 cgatgacgtggaccctcttgaagtagagagaacgcatcaggaatct 33957324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 230; Significance: 1e-126; HSPs: 5)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 219 - 614
Target Start/End: Original strand, 13493 - 13877
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13493 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 13588  T
Q  318 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 416  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  13589 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 13677  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  13678 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 13777  T
Q  517 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 614  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  13778 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctgtcgtaatttttaaat 13877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 219 - 609
Target Start/End: Original strand, 18946 - 19328
Alignment:
Q  219 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 317  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  18946 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 19041  T
Q  318 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 416  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  19042 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 19130  T
Q  417 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgc---ggttgctagtc 511  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||   | ||||||||||||||||||||||||||||||   |||||||||||    
T  19131 aggtgttattctcgagcgatttctggcagtgaaacctttaatcgtacagttttagaatctgggctgttttatcctggagacggcgccgcggttgctagtc 19230  T
Q  512 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  19231 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaatattttcgaagctctgtcgtaatttt 19328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 12986 - 13133
Alignment:
Q  61 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 160  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  12986 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13085  T
Q  161 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13086 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 18500 - 18590
Alignment:
Q  118 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 208  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18500 ttggaatgtaaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #5
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 15233 - 15279
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15233 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 203; Significance: 1e-110; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 32085 - 31839
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32085 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 31986  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31985 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctggtt 31886  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  31885 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 31839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 408 - 627
Target Start/End: Complemental strand, 31711 - 31492
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  31711 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgct 31612  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31611 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 31512  T
Q  608 ttcaaattacaaatacaaca 627  Q
    ||||||||||||| ||||||    
T  31511 ttcaaattacaaaaacaaca 31492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 199; E-Value: 1e-107
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 26913 - 26667
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26913 cttggagtatactagtgagtttgtggagcctttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 26814  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26813 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctggtt 26714  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  26713 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 26667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 135; E-Value: 2e-69
Query Start/End: Original strand, 408 - 620
Target Start/End: Complemental strand, 26539 - 26325
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||    
T  26539 accatatcgaggtgtcattctcgagagatttctggcagtgcagcctttaatcgtacagtaagaatatgggctgttttatcctggagacggcgcggttgct 26440  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||| || |||| ||||| ||||||||||||||| |||||||  ||||| |    
T  26439 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttgatcgtaactcatcccggtaatagtttcaaaagctccatcgtata 26340  T
Q  606 ttttcaaattacaaa 620  Q
    |||||||||||||||    
T  26339 ttttcaaattacaaa 26325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 30148 - 30102
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30148 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 30102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 199; Significance: 1e-107; HSPs: 2)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 199; E-Value: 1e-107
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 3564 - 3318
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3564 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcc 3465  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3464 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 3365  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  3364 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 158; E-Value: 3e-83
Query Start/End: Original strand, 408 - 627
Target Start/End: Complemental strand, 3224 - 3003
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  3224 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 3125  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  3124 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 3025  T
Q  606 ttttcaaattacaaatacaaca 627  Q
    ||||||||||||||| ||||||    
T  3024 ttttcaaattacaaaaacaaca 3003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 199; Significance: 1e-107; HSPs: 2)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 199; E-Value: 1e-107
Query Start/End: Original strand, 87 - 336
Target Start/End: Original strand, 80971 - 81217
Alignment:
Q  87 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  80971 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcc 81070  T
Q  187 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  81071 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 81170  T
Q  287 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 336  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  81171 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 81217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 158; E-Value: 3e-83
Query Start/End: Original strand, 408 - 627
Target Start/End: Original strand, 81311 - 81532
Alignment:
Q  408 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 507  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  81311 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 81410  T
Q  508 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 605  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  81411 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 81510  T
Q  606 ttttcaaattacaaatacaaca 627  Q
    ||||||||||||||| ||||||    
T  81511 ttttcaaattacaaaaacaaca 81532  T

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Target: scaffold0011 (Bit Score: 86; Significance: 3e-40; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 3e-40
Query Start/End: Original strand, 471 - 572
Target Start/End: Complemental strand, 1668 - 1567
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  1668 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 1569  T
Q  571 ct 572  Q
    ||    
T  1568 ct 1567  T

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Target: scaffold0011; HSP #2
Raw Score: 78; E-Value: 2e-35
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 7149 - 7036
Alignment:
Q  471 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 570  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| |    
T  7149 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtaa 7050  T
Q  571 ctcaccccggtaat 584  Q
    |||| |||| ||||    
T  7049 ctcaacccgataat 7036  T

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Target: scaffold0132 (Bit Score: 81; Significance: 3e-37; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 81; E-Value: 3e-37
Query Start/End: Original strand, 472 - 584
Target Start/End: Original strand, 2765 - 2877
Alignment:
Q  472 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| | ||||||||||||||||  ||||||||||||||||    
T  2765 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 2864  T
Q  572 tcaccccggtaat 584  Q
    ||| |||||||||    
T  2865 tcaacccggtaat 2877  T

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Target: scaffold0132; HSP #2
Raw Score: 81; E-Value: 3e-37
Query Start/End: Original strand, 472 - 584
Target Start/End: Original strand, 10725 - 10837
Alignment:
Q  472 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| | ||||||||||||||||  ||||||||||||||||    
T  10725 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 10824  T
Q  572 tcaccccggtaat 584  Q
    ||| |||||||||    
T  10825 tcaacccggtaat 10837  T

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Target: scaffold0067 (Bit Score: 55; Significance: 9e-22; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 55; E-Value: 9e-22
Query Start/End: Original strand, 479 - 584
Target Start/End: Original strand, 33968 - 34074
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 577  Q
    |||||||||||| ||  || ||||||| || ||||||||| |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  33968 tgttttatcctgaaggaggagcggttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 34067  T
Q  578 cggtaat 584  Q
    || ||||    
T  34068 cgataat 34074  T

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Target: scaffold0352 (Bit Score: 53; Significance: 1e-20; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 7199 - 7103
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  7199 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7103  T

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Target: scaffold0182 (Bit Score: 53; Significance: 1e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 9887 - 9983
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  9887 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9983  T

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Target: scaffold0002 (Bit Score: 49; Significance: 3e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 4169 - 4073
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| ||||| |||||||||| ||||||||||||||||||||    
T  4169 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 4073  T

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Target: scaffold0165 (Bit Score: 47; Significance: 5e-17; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 15588 - 15542
Alignment:
Q  11 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15588 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15542  T

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Target: scaffold0061 (Bit Score: 43; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 582
Target Start/End: Complemental strand, 45885 - 45776
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   || ||||||||||||||||||| |||||    
T  45885 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggttgtgac 45787  T
Q  572 tcaccccggta 582  Q
    ||| |||||||    
T  45786 tcaacccggta 45776  T

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Target: scaffold0020 (Bit Score: 43; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 574
Target Start/End: Original strand, 1220 - 1321
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||| ||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  1220 ctgggctgttttatcttggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 1318  T
Q  572 tca 574  Q
    |||    
T  1319 tca 1321  T

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Target: scaffold0017 (Bit Score: 43; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 152902 - 153011
Alignment:
Q  473 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 571  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   || ||||||||||||||||||| |||||    
T  152902 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggttgtgac 153000  T
Q  572 tcaccccggta 582  Q
    ||| |||||||    
T  153001 tcaacccggta 153011  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 83161 - 83065
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||  ||||| |||||| ||||||| || || || | ||| | |||||||||||||||| ||||||||||||||||||||    
T  83161 tgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactca 83065  T

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Target: scaffold0012 (Bit Score: 41; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 166086 - 166182
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactta-ggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 574  Q
    ||||||||||||||| ||||| ||||| |||| |  ||||||||| ||  || |||||| |||||||||||||||| ||||||||||| ||||||||    
T  166086 tgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactca 166182  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 568
Target Start/End: Complemental strand, 35729 - 35639
Alignment:
Q  479 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 568  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||| | |||||||||||||||| |||| | |||||||    
T  35729 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagagagcggcatggtcgt 35639  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 474 - 562
Target Start/End: Original strand, 171711 - 171798
Alignment:
Q  474 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacct 562  Q
    |||||||||||||||| | |||| || ||||| |||||| | |||||||| || ||| |||||| |||||||||||||||| ||||||||    
T  171711 tgggctgttttatcctag-gacgtcgtggttgatagtctgc-ttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacct 171798  T

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