View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17594_low_30 (Length: 236)

Name: NF17594_low_30
Description: NF17594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17594_low_30
NF17594_low_30
[»] chr6 (30 HSPs)
chr6 (70-219)||(13492699-13492847)
chr6 (70-215)||(16519879-16520022)
chr6 (82-216)||(17731204-17731337)
chr6 (70-215)||(9351973-9352116)
chr6 (88-219)||(7912238-7912368)
chr6 (102-219)||(7911819-7911936)
chr6 (70-219)||(13191601-13191749)
chr6 (102-219)||(13490062-13490179)
chr6 (114-219)||(9440516-9440620)
chr6 (153-219)||(17027619-17027685)
chr6 (158-219)||(20126270-20126331)
chr6 (163-219)||(3652981-3653037)
chr6 (160-219)||(3652485-3652544)
chr6 (156-219)||(21311966-21312029)
chr6 (130-219)||(9440397-9440485)
chr6 (160-219)||(6331000-6331059)
chr6 (160-219)||(20896776-20896835)
chr6 (160-219)||(21311514-21311573)
chr6 (124-169)||(9440993-9441037)
chr6 (155-219)||(31821780-31821844)
chr6 (160-219)||(20850320-20850379)
chr6 (160-219)||(23986405-23986464)
chr6 (160-221)||(17850917-17850978)
chr6 (160-221)||(17851373-17851434)
chr6 (160-219)||(2681304-2681363)
chr6 (160-219)||(14771807-14771866)
chr6 (156-219)||(27334156-27334219)
chr6 (156-219)||(27394896-27394959)
chr6 (169-219)||(2720652-2720702)
chr6 (133-219)||(32292858-32292943)
[»] chr4 (38 HSPs)
chr4 (70-219)||(35871538-35871686)
chr4 (70-219)||(23350365-23350513)
chr4 (70-219)||(44471407-44471555)
chr4 (70-221)||(15306177-15306326)
chr4 (102-221)||(44470954-44471073)
chr4 (70-219)||(49998546-49998694)
chr4 (93-219)||(14572232-14572357)
chr4 (102-219)||(14571803-14571920)
chr4 (70-178)||(27578577-27578683)
chr4 (68-219)||(41869828-41869976)
chr4 (106-219)||(20309600-20309710)
chr4 (70-219)||(13266002-13266144)
chr4 (71-184)||(27579026-27579137)
chr4 (131-219)||(8467882-8467967)
chr4 (160-219)||(12692081-12692140)
chr4 (144-219)||(17028858-17028932)
chr4 (160-219)||(29628749-29628808)
chr4 (160-221)||(9423938-9423999)
chr4 (81-188)||(2682743-2682848)
chr4 (160-219)||(21067281-21067340)
chr4 (160-219)||(50398620-50398679)
chr4 (160-219)||(50399075-50399134)
chr4 (159-213)||(35477801-35477855)
chr4 (144-189)||(33987183-33987227)
chr4 (155-219)||(14351789-14351853)
chr4 (160-216)||(24629065-24629121)
chr4 (160-219)||(1645831-1645890)
chr4 (160-219)||(3169205-3169264)
chr4 (160-191)||(4127547-4127578)
chr4 (160-191)||(4127999-4128030)
chr4 (160-219)||(23942871-23942930)
chr4 (160-219)||(51331363-51331422)
chr4 (160-219)||(53854889-53854948)
chr4 (160-219)||(53996197-53996256)
chr4 (155-212)||(52048755-52048813)
chr4 (154-219)||(17029323-17029388)
chr4 (163-216)||(24271635-24271690)
chr4 (160-216)||(24629518-24629574)
[»] chr8 (32 HSPs)
chr8 (68-219)||(34309027-34309177)
chr8 (70-219)||(34308567-34308715)
chr8 (70-219)||(25147446-25147594)
chr8 (70-219)||(12100602-12100749)
chr8 (69-216)||(21316200-21316346)
chr8 (68-219)||(25144680-25144830)
chr8 (88-190)||(25147895-25147996)
chr8 (70-219)||(27819334-27819481)
chr8 (70-147)||(31283356-31283432)
chr8 (70-219)||(22705090-22705230)
chr8 (65-217)||(9250908-9251057)
chr8 (160-219)||(2044057-2044116)
chr8 (166-219)||(17103086-17103139)
chr8 (161-219)||(22548637-22548695)
chr8 (157-221)||(28453334-28453398)
chr8 (156-219)||(8080430-8080493)
chr8 (160-219)||(10844882-10844941)
chr8 (160-219)||(22549083-22549142)
chr8 (156-215)||(22840621-22840680)
chr8 (160-219)||(27925898-27925957)
chr8 (160-221)||(30334994-30335055)
chr8 (160-219)||(22026378-22026437)
chr8 (172-219)||(28375142-28375189)
chr8 (160-219)||(32292396-32292455)
chr8 (156-219)||(33852346-33852409)
chr8 (160-221)||(27022424-27022485)
chr8 (164-219)||(10844703-10844758)
chr8 (156-219)||(29971489-29971552)
chr8 (160-219)||(41659193-41659252)
chr8 (155-219)||(25307759-25307823)
chr8 (171-219)||(27021967-27022015)
chr8 (156-219)||(30527569-30527630)
[»] chr7 (24 HSPs)
chr7 (70-215)||(11517480-11517624)
chr7 (69-216)||(9124868-9125014)
chr7 (70-219)||(42515002-42515150)
chr7 (70-219)||(13125224-13125372)
chr7 (70-218)||(18833196-18833343)
chr7 (88-219)||(13124789-13124919)
chr7 (106-219)||(2941845-2941958)
chr7 (69-219)||(5406676-5406824)
chr7 (117-219)||(25182318-25182419)
chr7 (160-221)||(2189143-2189204)
chr7 (160-219)||(6719162-6719221)
chr7 (160-219)||(42515543-42515602)
chr7 (104-221)||(31406670-31406787)
chr7 (158-219)||(6747686-6747747)
chr7 (160-221)||(26957643-26957704)
chr7 (160-219)||(2193255-2193314)
chr7 (160-219)||(28495853-28495912)
chr7 (155-219)||(29039108-29039172)
chr7 (160-220)||(46425740-46425800)
chr7 (160-219)||(28495696-28495755)
chr7 (160-219)||(35474209-35474268)
chr7 (156-190)||(679812-679846)
chr7 (156-190)||(2611769-2611803)
chr7 (161-219)||(36015499-36015557)
[»] chr2 (22 HSPs)
chr2 (70-219)||(30966144-30966292)
chr2 (70-219)||(30966600-30966748)
chr2 (70-219)||(29259708-29259856)
chr2 (70-216)||(24818236-24818381)
chr2 (69-190)||(5399934-5400054)
chr2 (92-219)||(82952-83075)
chr2 (70-219)||(1953067-1953213)
chr2 (88-219)||(30961979-30962108)
chr2 (156-222)||(1912520-1912586)
chr2 (156-219)||(41754284-41754347)
chr2 (160-219)||(18098966-18099025)
chr2 (156-219)||(25338085-25338148)
chr2 (160-219)||(33174957-33175016)
chr2 (160-219)||(16379392-16379451)
chr2 (160-219)||(18448006-18448065)
chr2 (160-219)||(25434144-25434203)
chr2 (160-219)||(27883014-27883073)
chr2 (160-219)||(29804681-29804740)
chr2 (162-219)||(16378938-16378995)
chr2 (160-219)||(1707041-1707099)
chr2 (160-219)||(11388188-11388246)
chr2 (160-188)||(33174504-33174532)
[»] chr5 (25 HSPs)
chr5 (69-219)||(22556445-22556594)
chr5 (70-219)||(3887145-3887293)
chr5 (70-219)||(2474315-2474463)
chr5 (70-219)||(2473869-2474017)
chr5 (70-215)||(3886693-3886837)
chr5 (88-219)||(22556897-22557027)
chr5 (92-219)||(22975098-22975224)
chr5 (71-219)||(1821817-1821964)
chr5 (70-219)||(188990-189126)
chr5 (70-203)||(30684660-30684792)
chr5 (70-203)||(30719909-30720041)
chr5 (159-219)||(8642122-8642182)
chr5 (160-219)||(10927491-10927550)
chr5 (160-219)||(21886234-21886293)
chr5 (160-219)||(34867789-34867848)
chr5 (160-219)||(15513101-15513160)
chr5 (156-219)||(39146934-39146997)
chr5 (155-219)||(4658080-4658144)
chr5 (155-219)||(8391409-8391473)
chr5 (110-188)||(2058775-2058853)
chr5 (160-219)||(10927034-10927093)
chr5 (160-219)||(17445543-17445602)
chr5 (160-219)||(34371611-34371670)
chr5 (160-221)||(42788732-42788793)
chr5 (155-191)||(20039590-20039626)
[»] scaffold0007 (1 HSPs)
scaffold0007 (70-219)||(142362-142510)
[»] scaffold0020 (1 HSPs)
scaffold0020 (70-219)||(107551-107699)
[»] scaffold0018 (1 HSPs)
scaffold0018 (70-216)||(10210-10355)
[»] chr3 (22 HSPs)
chr3 (69-219)||(31284364-31284513)
chr3 (70-219)||(12820554-12820702)
chr3 (70-190)||(32388848-32388967)
chr3 (73-219)||(41472214-41472359)
chr3 (70-216)||(41473907-41474052)
chr3 (68-216)||(25248019-25248166)
chr3 (102-219)||(8067221-8067338)
chr3 (69-219)||(7477101-7477249)
chr3 (102-216)||(27187421-27187535)
chr3 (69-219)||(7493791-7493939)
chr3 (156-219)||(30529682-30529745)
chr3 (156-219)||(28561741-28561804)
chr3 (156-219)||(39653159-39653222)
chr3 (160-216)||(14813948-14814004)
chr3 (160-219)||(16811380-16811439)
chr3 (160-219)||(39640936-39640995)
chr3 (160-218)||(16810924-16810982)
chr3 (161-219)||(25230793-25230851)
chr3 (161-219)||(25238380-25238438)
chr3 (161-219)||(25230336-25230394)
chr3 (161-219)||(25237923-25237981)
chr3 (160-221)||(2911094-2911155)
[»] scaffold0022 (2 HSPs)
scaffold0022 (69-219)||(162766-162915)
scaffold0022 (102-219)||(69903-70019)
[»] scaffold0024 (1 HSPs)
scaffold0024 (70-219)||(105630-105778)
[»] chr1 (31 HSPs)
chr1 (72-219)||(35761002-35761148)
chr1 (70-219)||(35759696-35759844)
chr1 (70-219)||(2328225-2328373)
chr1 (88-219)||(20061279-20061409)
chr1 (102-186)||(46693857-46693942)
chr1 (145-219)||(2634909-2634982)
chr1 (78-184)||(23180649-23180753)
chr1 (160-219)||(43057611-43057670)
chr1 (156-221)||(20057805-20057870)
chr1 (160-219)||(20054168-20054227)
chr1 (160-219)||(20054624-20054683)
chr1 (160-219)||(20055080-20055139)
chr1 (160-219)||(20055536-20055595)
chr1 (160-219)||(20055992-20056051)
chr1 (160-219)||(20056448-20056507)
chr1 (160-219)||(20057351-20057410)
chr1 (160-219)||(20845749-20845808)
chr1 (160-219)||(30873038-30873097)
chr1 (160-216)||(50003166-50003222)
chr1 (160-219)||(38340905-38340964)
chr1 (160-219)||(50002795-50002854)
chr1 (131-221)||(16907206-16907294)
chr1 (161-219)||(31822751-31822809)
chr1 (160-191)||(16452049-16452080)
chr1 (160-191)||(16461202-16461233)
chr1 (1-32)||(44116561-44116592)
chr1 (160-219)||(50002373-50002432)
chr1 (155-213)||(7548085-7548143)
chr1 (31-61)||(44116626-44116656)
chr1 (156-201)||(7204920-7204965)
chr1 (171-219)||(51372962-51373010)
[»] scaffold0322 (2 HSPs)
scaffold0322 (87-219)||(18209-18340)
scaffold0322 (153-219)||(18958-19024)
[»] scaffold0040 (2 HSPs)
scaffold0040 (70-219)||(2298-2446)
scaffold0040 (70-123)||(2554-2606)
[»] scaffold0005 (2 HSPs)
scaffold0005 (93-219)||(245019-245144)
scaffold0005 (102-219)||(245456-245573)
[»] scaffold0047 (2 HSPs)
scaffold0047 (156-219)||(18222-18285)
scaffold0047 (160-219)||(17686-17745)
[»] scaffold0499 (1 HSPs)
scaffold0499 (160-219)||(2139-2198)
[»] scaffold0333 (2 HSPs)
scaffold0333 (160-219)||(4560-4619)
scaffold0333 (160-219)||(5015-5074)
[»] scaffold0168 (1 HSPs)
scaffold0168 (160-219)||(2741-2800)
[»] scaffold0664 (1 HSPs)
scaffold0664 (159-219)||(4070-4130)
[»] scaffold0557 (1 HSPs)
scaffold0557 (160-191)||(749-780)
[»] scaffold0243 (1 HSPs)
scaffold0243 (160-219)||(1219-1278)
[»] scaffold0088 (1 HSPs)
scaffold0088 (160-219)||(23672-23731)
[»] scaffold1126 (1 HSPs)
scaffold1126 (165-221)||(1002-1058)


Alignment Details
Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 13492699 - 13492847
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13492699 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcatatc 13492797  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  13492798 ggaatgagaaggatcctgaggctgtgcaggtatgagactgcatggttgaa 13492847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 16519879 - 16520022
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  16519879 tgtaacgcctccacttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcctggca-gcttctaggcaaaacagaatcacatc 16519976  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggt 215  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||    
T  16519977 ggaatgagagggatcctgaggctgtgtaggtatgagactacatggt 16520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 17731337 - 17731204
Alignment:
Q  82 gcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagaggg 181  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17731337 gcttggtgggcatgtaacgcct-gaggctgatgagggcggggagtggtccggctcctagcatgcttctaggcaaaattgaatcacatcggaatgagaggg 17731239  T
Q  182 atcctgaggctgtacaggtatgagactgcatggtt 216  Q
    |||||||||| || |||||||| ||||||||||||    
T  17731238 atcctgaggccgttcaggtatgggactgcatggtt 17731204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 9351973 - 9352116
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  9351973 tgtaacgcctccgcttggtgggcatgtaacaccc-gaggctgatgagggcggggagtggtccggctcctggca-gcttctaggcaaaacataatcacatc 9352070  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggt 215  Q
    | |||||||||||||||||||||||  |||||||||||| ||||||    
T  9352071 gaaatgagagggatcctgaggctgtgtaggtatgagactacatggt 9352116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 7912238 - 7912368
Alignment:
Q  88 tgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctg 187  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |    
T  7912238 tgggcatgtaacgccc-gacgcagatgagggcggggagtggtccggctcctggcatgcttctaggaaaaactgaatcacatcggaatgagagggatctcg 7912336  T
Q  188 aggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| || |||||||| |||||||||||||||    
T  7912337 aggccgtgcaggtatgggactgcatggttgaa 7912368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 7911819 - 7911936
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||  ||||| || ||||||    
T  7911819 cccgaggctgatgagagcggggagtggtccgactcctggcatgtttctaggaaaaactgaatcacatcggaatgagagggatctcgaggccgtgcaggta 7911918  T
Q  202 tgagactgcatggttgaa 219  Q
    |  |||||||||||||||    
T  7911919 taggactgcatggttgaa 7911936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 13191749 - 13191601
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||| ||||||||||| |||||||||||||||  ||||||||||||||||| |||| ||||||||| ||| ||||||| ||| |||||| |||||||||    
T  13191749 tgtaatgcctccgcttggtgggcatgtaacgcct-gaggctgatgagggcggcgagtagtccggctcttggtatgcttcgaggaaaaactaaatcacatc 13191651  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||| || || |  ||||||| |||||||||||||||    
T  13191650 ggaatgagagggatcctaagactatgtaggtatgggactgcatggttgaa 13191601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 13490062 - 13490179
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |||||||| |||| ||||||||| ||||||    
T  13490062 cccgaggctgatgaaggcggggagtggtccggctcctgacatgcttctaggaaaaacttaatcacatcgaaatgagagagatcatgaggctgtgcaggta 13490161  T
Q  202 tgagactgcatggttgaa 219  Q
    |  |||||||||||||||    
T  13490162 taggactgcatggttgaa 13490179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 9440620 - 9440516
Alignment:
Q  114 gagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatg 213  Q
    ||||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||| |  || |||||||| |||| ||||    
T  9440620 gagggtggggagtggtccggctctttgca-gcttctagggaaaactgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgggacttcatg 9440522  T
Q  214 gttgaa 219  Q
    ||||||    
T  9440521 gttgaa 9440516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 17027685 - 17027619
Alignment:
Q  153 caaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||| ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||    
T  17027685 caaaactaaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaa 17027619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 20126331 - 20126270
Alignment:
Q  158 ctgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||    
T  20126331 ctgaatcacatcggaatgagagggatcctaaggctgtgtaggtatgagactacatggttgaa 20126270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 3652981 - 3653037
Alignment:
Q  163 tcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  3652981 tcacatcggaatgagagggatcctgaggctgtgtaggtatgggactgcatggttgaa 3653037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 3652485 - 3652544
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||| ||||||||||    
T  3652485 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaa 3652544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 21311966 - 21312029
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  21311966 aactgaatcacaccagaatgagagggttcatgaggctgtgcaggtatgagactgcatggttgaa 21312029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 9440485 - 9440397
Alignment:
Q  130 ccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||| ||||| ||||||||| || || ||||||||||||||||||||||||||||| |  || ||||||||  ||||||||||||||    
T  9440485 ccggctcttggca-gcttctagggaagaccgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatggaactgcatggttgaa 9440397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 6331059 - 6331000
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||| |||||||||||| ||  |||||||||||| ||||||||||    
T  6331059 gaatcacatcggaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaa 6331000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20896835 - 20896776
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||||| |||| ||  |||||||||||| ||||||||||    
T  20896835 gaatcacatcggaatgagagggatccttaggccgtgtaggtatgagactacatggttgaa 20896776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 21311514 - 21311573
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| || |||||| ||||| ||||| |||||||||||||||    
T  21311514 gaatcacatcggaatgagagggttcatgaggccgtacaagtatgggactgcatggttgaa 21311573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 9441037 - 9440993
Alignment:
Q  124 agtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  9441037 agtggtccggctcctggca-gcttctaggcaaaactgaatcacatc 9440993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 31821844 - 31821780
Alignment:
Q  155 aaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| ||||||||||||||||||||||||| ||||||  |  |||||||||||| ||||||||||    
T  31821844 aaaccgaatcacatcggaatgagagggatcatgaggccatgtaggtatgagactacatggttgaa 31821780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 20850320 - 20850379
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| || |||||| || |||||||| |||||||||||||||    
T  20850320 gaatcacaccggaatgagagggttcatgaggccgtgcaggtatgggactgcatggttgaa 20850379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 23986464 - 23986405
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||| ||||| ||  ||||||| |||| ||||||||||    
T  23986464 gaatcacatcggaatgagagggatccggaggccgtgtaggtatgggactacatggttgaa 23986405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 17850917 - 17850978
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    |||||||| ||||||||||||||||||||||  || || ||||| |||||||||||| ||||    
T  17850917 gaatcacaccggaatgagagggatcctgaggtcgtgcaagtatgggactgcatggttaaaag 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 17851373 - 17851434
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    |||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||| ||||    
T  17851373 gaatcacaccggaatgagagggatcccgaggccgtgcaagtatgggactgcatggttaaaag 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 2681363 - 2681304
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| ||  |||| || |||||||||||||||    
T  2681363 gaatcacaccggaatgagagggttcctgaggccgtgtaggtttgggactgcatggttgaa 2681304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 14771866 - 14771807
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||  ||||||||||||||||| || || ||  |||||||||||||||||||||||    
T  14771866 gaatcacgccggaatgagagggatcccgaagccgtgtaggtatgagactgcatggttgaa 14771807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 27334156 - 27334219
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| ||||| ||||||| ||||||||  || ||||||||  ||||||||||||||    
T  27334156 aactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtatggaactgcatggttgaa 27334219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 27394896 - 27394959
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| ||||| ||||||| ||||||||  || ||||||||  ||||||||||||||    
T  27394896 aactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtatggaactgcatggttgaa 27394959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 2720702 - 2720652
Alignment:
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||  |||  || ||||||||||||||||||||||||    
T  2720702 cggaatgagagggatcccaaggtcgtgcaggtatgagactgcatggttgaa 2720652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 32292858 - 32292943
Alignment:
Q  133 gctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||| |||||||||||| |  | |||||| ||||||||||  ||||| ||   || ||||||||||||||||||||||||    
T  32292858 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatccttagatcgtgcaggtatgagactgcatggttgaa 32292943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 35871538 - 35871686
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35871538 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 35871636  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  35871637 ggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaa 35871686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 23350513 - 23350365
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23350513 tgtaacgcctccgcttggtgggcatgtaacgctc-gaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 23350415  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| |||| |||||| ||||||||| | |||||||||||||||    
T  23350414 ggaatgagagagatcttgaggccgtacaggtaggggactgcatggttgaa 23350365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 44471555 - 44471407
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  44471555 tgtaacacctctgcttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcctagcatgcttctaggaaaaactgaatcacatc 44471457  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| |||| |||||| |||||||||||||||| ||||||||||    
T  44471456 ggaatgagagagatcttgaggccgtacaggtatgagactacatggttgaa 44471407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 15306326 - 15306177
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||||    
T  15306326 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgagggcgaggagtggtctggctcctggca-gcttctaggcaaaacagaaccacatc 15306229  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
     ||||||||||||||||||||||||  ||||||| |||| |||||| |||||    
T  15306228 agaatgagagggatcctgaggctgtgtaggtatgggactacatggtcgaaag 15306177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 44471073 - 44470954
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||    
T  44471073 cccgaggctaatgagggcggggagtggtccggctcctagcatgcttctaggcaaaactgaatcacatcggaatgagagagatcatgacgctgtacaagta 44470974  T
Q  202 tgagactgcatggttgaaag 221  Q
    || ||||| |||||||||||    
T  44470973 tgtgactgtatggttgaaag 44470954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 49998546 - 49998694
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||||||||| |||| ||||||||||| || |  |||||||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||    
T  49998546 tgtaacgcctccccttggtgggcatgtaaagctca-aggctgatgagggcggggagtggtccagctcttggcatgcttctagacaaaactaaatcacatc 49998644  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||| |||||||  ||| ||| |||||||||||||||    
T  49998645 ggaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaa 49998694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 14572357 - 14572232
Alignment:
Q  93 atgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggct 192  Q
    |||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||  |||  |||||||||||||||||||||||||||||||||     
T  14572357 atgtaacgccca-aggctgatgagggcggggagtggtccggctcttggcatgcatctagaaaaatatgaatcacatcggaatgagagggatcctgaggcc 14572259  T
Q  193 gtacaggtatgagactgcatggttgaa 219  Q
     |  ||||||| |||| ||||||||||    
T  14572258 atgtaggtatgggactacatggttgaa 14572232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 14571920 - 14571803
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||  ||||| ||||||| |||| | ||  |||||    
T  14571920 cccgaggctgatgagggcggggagtggtccggctcctggcttggttctaggaaaaactgaatcacatcataatgaaagggatcttgagtccgtgtaggta 14571821  T
Q  202 tgagactgcatggttgaa 219  Q
    || |||| ||||||||||    
T  14571820 tgggacttcatggttgaa 14571803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 27578683 - 27578577
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||| |||||||||| |||||||||||| | | ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||    
T  27578683 tgtaacacctccgcttggtgggcatgtaacactc-gaggctgatgagggcggggagcggtccggctcctggca-gcttctaggcaaaaccgaatcatatc 27578586  T
Q  170 ggaatgaga 178  Q
     ||||||||    
T  27578585 agaatgaga 27578577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 41869828 - 41869976
Alignment:
Q  68 attgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcaca 167  Q
    ||||||||||||||||||| ||| |||||||||| |  |||||| ||| || |||||||||| || ||||||  | |||||||||||||||| |||||||    
T  41869828 attgtaacgcctccgcttggtggacatgtaacgctca-aggctggtgacgg-ggggagtggtacgtctcctgtaa-gcttctaggcaaaactaaatcaca 41869924  T
Q  168 tcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||| |||||||||||||||| |||||||  |||| ||||||||| |||||    
T  41869925 tcggagtgagagggatcctgagactgtacatatatgggactgcatgattgaa 41869976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 20309710 - 20309600
Alignment:
Q  106 aggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgag 205  Q
    ||||||| ||||||||||| ||||| ||||| || || |||||||||  |||| ||||||||||||||||||||||||| |||| || | |||||||| |    
T  20309710 aggctgacgagggcggggattggtctggctcatgaca-gcttctagg--aaaccgaatcacatcggaatgagagggatcatgagactttgcaggtatgtg 20309614  T
Q  206 actgcatggttgaa 219  Q
    ||| ||||||||||    
T  20309613 actacatggttgaa 20309600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 13266002 - 13266144
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| ||||||||||||| | |||||||| |||     |||||||||||| || ||||||  ||||| ||||||| ||||||||||     
T  13266002 tgtaacgcctccgcttggtgggcatgtaacg-ctcgaggctggtga-----gggagtggtccgacttctggca-acttctgggcaaaattgaatcacatt 13266094  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
     |||||||||||||| | | || || |||||||| || ||||||||||||    
T  13266095 agaatgagagggatcttaaagccgtgcaggtatgggaatgcatggttgaa 13266144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 27579137 - 27579026
Alignment:
Q  71 gtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 170  Q
    ||||||||| || ||| ||||||||||| || | ||||||| |||||| ||||||||||||| ||| || || ||||||||| ||||| |||||||||||    
T  27579137 gtaacgccttcgtttggtgggcatgtaatgctc-gaggctggtgagggtggggagtggtccgactcttgaca-gcttctaggtaaaaccgaatcacatcg 27579040  T
Q  171 gaatgagagggatc 184  Q
    |||| |||||||||    
T  27579039 gaataagagggatc 27579026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 8467967 - 8467882
Alignment:
Q  131 cggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| ||||||||||||  | ||| |||||| |||||| |||||||||||| |||| ||||||||||||| ||||||||||    
T  8467967 cggctcctggca-gcttctaggcaa--ccgaaccacatcagaatgaaagggatcctgagactgtgcaggtatgagactacatggttgaa 8467882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 12692140 - 12692081
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  12692140 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 12692081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 17028858 - 17028932
Alignment:
Q  144 gcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||  | || ||||| |||||||| ||||||    
T  17028858 gcttctaggcaaa-ctgaatcacatcggaatgagagggatcctgaagccttgcatgtatgggactgcatagttgaa 17028932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 29628808 - 29628749
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||| |||||||||||||||||||| ||  |||||||||||| ||||||||||    
T  29628808 gaatcacatcgaaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaa 29628749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 9423999 - 9423938
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    |||||||| ||||||||||||||||||||||  || || ||||| |||||||||||||||||    
T  9423999 gaatcacaccggaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaag 9423938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 2682848 - 2682743
Alignment:
Q  81 cgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagg 180  Q
    ||||||||||||||||||||||| || ||| | ||  | ||| |||||||||||| |||  | |||| || |||||| |||||||||||| |||||||||    
T  2682848 cgcttgatgggcatgtaacgccc-gaagctaacgaaagtgggaagtggtccggctgctgata-gcttttaagcaaaattgaatcacatcgaaatgagagg 2682751  T
Q  181 gatcctga 188  Q
    ||||||||    
T  2682750 gatcctga 2682743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 21067281 - 21067340
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||||||| ||||  || || |||||||||||||||||||||    
T  21067281 gaatcacaccggaatgagagggatcccgaggtcgtgcatgtatgagactgcatggttgaa 21067340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 50398679 - 50398620
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||||| ||  ||||||  |||| ||||||||||    
T  50398679 gaatcacatcggaatgagagggatcctgaggccgtgtaggtataggactacatggttgaa 50398620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 50399134 - 50399075
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||| | ||  |||||||||| | ||||||||||    
T  50399134 gaatcacatcggaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaa 50399075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 35477801 - 35477855
Alignment:
Q  159 tgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatg 213  Q
    ||||||||||||||||||||| ||||||||||| || || ||| |||||||||||    
T  35477801 tgaatcacatcggaatgagagagatcctgaggccgtgcaagtacgagactgcatg 35477855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 33987227 - 33987183
Alignment:
Q  144 gcttctaggcaaaactgaatcacatcggaatgagagggatcctgag 189  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  33987227 gcttctaggcaaa-ctgaatcacatcggaatgagagggatcatgag 33987183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 14351789 - 14351853
Alignment:
Q  155 aaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| |||||||| | ||||||||||||||||||||  || || ||||||| |||||||||||||    
T  14351789 aaaccgaatcacaccagaatgagagggatcctgaggtcgtgcatgtatgagtctgcatggttgaa 14351853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 24629121 - 24629065
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    |||||||| ||||||||||||| ||||||||| ||  ||||||| ||||||||||||    
T  24629121 gaatcacaccggaatgagagggttcctgaggccgtgtaggtatgggactgcatggtt 24629065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 1645890 - 1645831
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||| ||| |||||| ||  ||||||| |||| ||||||||||    
T  1645890 gaatcacatcggaatgagaggaatcttgaggccgtgtaggtatgggactacatggttgaa 1645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 3169205 - 3169264
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||| ||| |||||| ||  ||||||| |||| ||||||||||    
T  3169205 gaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaa 3169264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 191
Target Start/End: Complemental strand, 4127578 - 4127547
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggc 191  Q
    ||||||||||||||||||||||||||||||||    
T  4127578 gaatcacatcggaatgagagggatcctgaggc 4127547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 191
Target Start/End: Complemental strand, 4128030 - 4127999
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggc 191  Q
    ||||||||||||||||||||||||||||||||    
T  4128030 gaatcacatcggaatgagagggatcctgaggc 4127999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 23942930 - 23942871
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||| ||| ||  |||||||  ||| ||||||||||    
T  23942930 gaatcacatcggaatgagagggatcctggggccgtgtaggtatggaactacatggttgaa 23942871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 51331422 - 51331363
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||| ||| |||||| ||  ||||||| |||| ||||||||||    
T  51331422 gaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaa 51331363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 53854948 - 53854889
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||| ||| || ||  ||||||||||||  |||||||||    
T  53854948 gaatcacatcggaatgagagggatcatgaagcagtgtaggtatgagactatatggttgaa 53854889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 53996256 - 53996197
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||| ||||||||||||| |  || |||| |||| ||||||||||    
T  53996256 gaatcacatcggaatgagaaggatcctgaggctatgtagatatgggactacatggttgaa 53996197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 52048813 - 52048755
Alignment:
Q  155 aaactgaat-cacatcggaatgagagggatcctgaggctgtacaggtatgagactgcat 212  Q
    ||||||||| ||| |||||||||||||| |||| |||| |||||||||||| |||||||    
T  52048813 aaactgaattcacgtcggaatgagagggttcctaaggccgtacaggtatgaaactgcat 52048755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 17029323 - 17029388
Alignment:
Q  154 aaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| ||||||||||||||||||||  ||||  || || ||||| |||||||| ||||||    
T  17029323 aaaactgaattacatcggaatgagagggatctagaggtcgtgcaagtatgggactgcatagttgaa 17029388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 24271690 - 24271635
Alignment:
Q  163 tcacatcggaatgagagggatcctgagg--ctgtacaggtatgagactgcatggtt 216  Q
    ||||||||||||||||||| ||||||||   ||| ||||||||||||| |||||||    
T  24271690 tcacatcggaatgagagggttcctgaggtcgtgtgcaggtatgagactacatggtt 24271635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 24629574 - 24629518
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    |||||||| ||||||||||||| ||||||||  ||  ||||||| ||||||||||||    
T  24629574 gaatcacaccggaatgagagggttcctgaggtcgtgtaggtatgggactgcatggtt 24629518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 6e-64; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 34309177 - 34309027
Alignment:
Q  68 attgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcaca 167  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34309177 attgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgagggcgaggagtggtccggctcctggcatgcttctaggcaaaactgaatcaca 34309079  T
Q  168 tcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  34309078 tcggaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaa 34309027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 34308715 - 34308567
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34308715 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgataagggcggggagtggtccggctcctggcgtgcttctaggcaaaactgaatcacatc 34308617  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||| |||||||||||||| ||||| ||||||||||| |||||||||    
T  34308616 ggaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaa 34308567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 25147446 - 25147594
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25147446 tgtaacgcctccgcttggtgggcatgtaacactc-gaggctgatgagggcggggagtggtccggctcttggcatgcttctaggcaaaactaaatcacatc 25147544  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| |||||| || ||||  |||||||||||||||||||||||    
T  25147545 ggaatgagagagatcctaagactgtgtaggtatgagactgcatggttgaa 25147594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 12100602 - 12100749
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||| | || ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  12100602 tgtaacgcctccgctcggtgtgcatgtaacaccc-gaggctgatgagggcggggagtggtccgactcctggcatgcttctaggaaaaactgaatcacatc 12100700  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    | |||||||  ||||||||||| |||||||||||||||||||||||||||    
T  12100701 gaaatgaga-agatcctgaggccgtacaggtatgagactgcatggttgaa 12100749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 21316346 - 21316200
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||| |||| ||||||||||    
T  21316346 ttgtaacacctccgcttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggcttctggcaagcatctaggaaaaattgaatcacat 21316248  T
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    ||  |||||||||||||| |||| || |||||||||||||| ||||||    
T  21316247 cgcgatgagagggatcctaaggccgtgcaggtatgagactgtatggtt 21316200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 25144680 - 25144830
Alignment:
Q  68 attgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcaca 167  Q
    |||||||| || ||||||| | |||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25144680 attgtaacacccccgcttggtaggcatgtaacgttc-gaggctgatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcaca 25144778  T
Q  168 tcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    || ||||||||| ||||  ||||  || |||||||| || |||||| |||||    
T  25144779 tcagaatgagagagatctcgaggtcgtgcaggtatgggattgcatgattgaa 25144830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 25147895 - 25147996
Alignment:
Q  88 tgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctg 187  Q
    |||||||||||||| | |||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||| |    
T  25147895 tgggcatgtaacgctc-gagtatgatgagggcggggagtggtttggctcctggcatgcttctaggcaaaactgaatcacataagaatgagagggatcccg 25147993  T
Q  188 agg 190  Q
    |||    
T  25147994 agg 25147996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 27819481 - 27819334
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| ||||||||||| || | |||| |||||||||  || ||||||||| ||||||| | |||| |||||||||| ||||||||||    
T  27819481 tgtaacgcctccgcttggtgggcatgtaaggctc-gaggttgatgagggtaggaagtggtccgactcctggaa-gcttttaggcaaaaccgaatcacatc 27819384  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
     |||||||||||||| ||| |   | || |||||||||| ||||||||||    
T  27819383 agaatgagagggatcatgaagtcatgcaagtatgagacttcatggttgaa 27819334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 31283432 - 31283356
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgctt 147  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||||||| ||||||||    
T  31283432 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgagggtggagagtggtccggctcctagcatgctt 31283356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 22705090 - 22705230
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||| | |||||||||||||| | ||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||| |||           
T  22705090 tgtaacgcctccgctcggtgggcatgtaacgctc-gaggctgatgaggacggggagtggtcaggctcctggca-gcttcaaggcaaaaccgaa------- 22705180  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||| || ||  ||||||| ||||| ||| |||||    
T  22705181 ggaatgagagggatcctgaagccgtgtaggtatgggactggatgattgaa 22705230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 217
Target Start/End: Original strand, 9250908 - 9251057
Alignment:
Q  65 cttattgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatc 164  Q
    |||| |||||| |||||||||| |||  ||||||||  | ||||||||||| |||| ||||||||| | ||||| |||  ||| |||||||||| |||||    
T  9250908 cttaatgtaacacctccgcttggtggatatgtaacgttc-gaggctgatgaaggcgaggagtggtctgcctcctagcaa-cttttaggcaaaaccgaatc 9251005  T
Q  165 acatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttg 217  Q
    ||||| |||||||||||||||||| ||  || ||||||| |||||||||||||    
T  9251006 acatcagaatgagagggatcctgaagc-ctagaggtatgggactgcatggttg 9251057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 2044057 - 2044116
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  2044057 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaa 2044116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 17103086 - 17103139
Alignment:
Q  166 catcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  17103086 catcggaatgagagagatcctgaggccgtacaggtatgagactgcatggttgaa 17103139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 22548695 - 22548637
Alignment:
Q  161 aatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| |||||||||||||||    
T  22548695 aatcacaccggaatgagagggttcctgaggctgtgcaggtatgtgactgcatggttgaa 22548637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 28453334 - 28453398
Alignment:
Q  157 actgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    ||||||||||| ||||||||||||||||| ||||  || ||||||||||||| ||||||||||||    
T  28453334 actgaatcacaccggaatgagagggatcccgaggtcgtgcaggtatgagacttcatggttgaaag 28453398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 8080493 - 8080430
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||||||||||| || ||  ||||||| |||| ||||||||||    
T  8080493 aactgaatcacatcggaatgagagggatcctgaagccgtgtaggtatgggactacatggttgaa 8080430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 10844882 - 10844941
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  10844882 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 10844941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 22549142 - 22549083
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||  |||||||||||| |||||||| |||||||||||||||    
T  22549142 gaatcacaccggaatgagaggcttcctgaggctgtgcaggtatgtgactgcatggttgaa 22549083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 22840680 - 22840621
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggt 215  Q
    |||||||||||||||||||||||| |||||||||||| |  |||||||||||| ||||||    
T  22840680 aactgaatcacatcggaatgagagagatcctgaggctttgtaggtatgagactacatggt 22840621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 27925898 - 27925957
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  27925898 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 27925957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 30335055 - 30334994
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    ||||||||||||||| ||| |||||||||| |||| |||||||| ||||||| |||||||||    
T  30335055 gaatcacatcggaattagatggatcctgagactgtgcaggtatgcgactgcaaggttgaaag 30334994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 22026378 - 22026437
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| || |||||| || |||||||| |||||||||||||||    
T  22026378 gaatcacaccggaatgagagggttcgtgaggccgtgcaggtatgggactgcatggttgaa 22026437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 28375189 - 28375142
Alignment:
Q  172 aatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||    
T  28375189 aatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaa 28375142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 32292396 - 32292455
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || || ||||| |||||||||||||||    
T  32292396 gaatcacaccggaatgagagggttcctgaggccgtgcaagtatgggactgcatggttgaa 32292455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 33852409 - 33852346
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| | ||||||||||||||| ||| | || |||||||||||||| |||||||||    
T  33852409 aactgaatcacaccagaatgagagggatcccgagaccgtgcaggtatgagactgtatggttgaa 33852346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 27022485 - 27022424
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    ||||||||||||||||||||||||| ||||||  |  ||||||| |||| ||||||||||||    
T  27022485 gaatcacatcggaatgagagggatcttgaggccatgtaggtatgggactacatggttgaaag 27022424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 10844758 - 10844703
Alignment:
Q  164 cacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| ||||||||||||| |||||||||  | |||||||| |||||||||||||||    
T  10844758 cacaccggaatgagagggttcctgaggccttgcaggtatgggactgcatggttgaa 10844703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 29971552 - 29971489
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||| ||||  || |||||||||||| ||  |||||||||||| ||||||||||    
T  29971552 aactgaatcacatcagaattggaaggatcctgaggccgtgtaggtatgagactacatggttgaa 29971489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 41659252 - 41659193
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| |||||| |  || |||||||| |||||||||||||||    
T  41659252 gaatcacaccggaatgagagggttcctgatgtcgtgcaggtatgggactgcatggttgaa 41659193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 25307759 - 25307823
Alignment:
Q  155 aaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||  |||||||||| ||| |  |||| || |||||||||||||| |||||||||    
T  25307759 aaactgaatcacactggaatgagagcgattccaaggccgtgcaggtatgagactgtatggttgaa 25307823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 27022015 - 27021967
Alignment:
Q  171 gaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||  |  |||||| ||||||||||||||||    
T  27022015 gaatgagagggatcctgaggccatgtaggtataagactgcatggttgaa 27021967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 30527630 - 30527569
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||  |||||||||||||| | ||||| ||||  ||||||||||||||| |||||    
T  30527630 aactgaatcacactggaatgagagggattccgaggccgtac--gtatgagactgcatgtttgaa 30527569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 11517624 - 11517480
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11517624 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggttgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 11517526  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggt 215  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||    
T  11517525 ggaatgagagggatcctgaggccgtacaggtatgggactgcatggt 11517480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 9124868 - 9125014
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9124868 ttgtaacgccttcgcttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 9124966  T
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    ||||||||||| |||| |||||| || |||||||||||||| ||||||    
T  9124967 cggaatgagagagatcttgaggccgtgcaggtatgagactgtatggtt 9125014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 42515002 - 42515150
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  42515002 tgtaacgtctccgcttggtgggcatgtaacgccc-gaggctgatgagggtggagagtggtccggctcctggcatgcttctaggcaaaattgaatcacatc 42515100  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  42515101 ggaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaa 42515150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 13125372 - 13125224
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  13125372 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggcggatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcatatc 13125274  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||| ||||||  | |||||||| |||||||||||||||    
T  13125273 ggaatgagagggatcttgaggccctgcaggtatgggactgcatggttgaa 13125224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 18833196 - 18833343
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||| ||||||| |||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18833196 tgtaacgcccccgcttggtgggcatgtaacgctcag-ggctgatgagggcggggagtggtccggttcctggcatgcttctaggcaaaactgaatcacatc 18833294  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttga 218  Q
    |||||||||||| ||||||||| |||||||||||  |||||||||||||    
T  18833295 ggaatgagagggttcctgaggccgtacaggtatggaactgcatggttga 18833343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 13124919 - 13124789
Alignment:
Q  88 tgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctg 187  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||    
T  13124919 tgggcatgtaacgccc-gaggctgatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcatattggaatgagagggatcttg 13124821  T
Q  188 aggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| || |||||||| |||||||||||||||    
T  13124820 aggccgtgcaggtatgggactgcatggttgaa 13124789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 2941958 - 2941845
Alignment:
Q  106 aggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgag 205  Q
    ||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  2941958 aggctgatgagggcgaggagtggcccggctcccgccatgcttctaggcaaaactgaatcacatcagaatgagagggatcctgaggccgtacaggtatggg 2941859  T
Q  206 actgcatggttgaa 219  Q
    ||||||||||||||    
T  2941858 actgcatggttgaa 2941845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 5406824 - 5406676
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    |||||||||||||||||  |||||||||||||| | |||||||||||||| || |||||||||||||| || || ||||||| |||||||||||||||||    
T  5406824 ttgtaacgcctccgcttcgtgggcatgtaacgctc-gaggctgatgagggtggagagtggtccggctcatgaca-gcttctaagcaaaactgaatcacat 5406727  T
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||| | |  || | |||||| |||||||||||||||    
T  5406726 cggaatgatagggatcctaaagtcgtgccggtatgggactgcatggttgaa 5406676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 25182318 - 25182419
Alignment:
Q  117 ggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    |||||||||||||| ||||||| ||| |||||||||||||   || ||||||||||||||||| ||||||||| |||| || ||||||||||||||||||    
T  25182318 ggcggggagtggtcaggctcctagca-gcttctaggcaaagacgagtcacatcggaatgagagagatcctgagactgtgcaagtatgagactgcatggtt 25182416  T
Q  217 gaa 219  Q
    |||    
T  25182417 gaa 25182419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 2189143 - 2189204
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    |||||||| ||||||||||||| |||||||||||| ||||| || |||||||||||||||||    
T  2189143 gaatcacaccggaatgagagggttcctgaggctgtgcaggtgtgggactgcatggttgaaag 2189204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 6719221 - 6719162
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||| |||||||||||||||||||||||||  ||||||| |||| ||||||||||    
T  6719221 gaatcacattggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaa 6719162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 42515543 - 42515602
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| ||||||||||||||||||||| ||  |||||||||||| ||||||||||    
T  42515543 gaatcacatcagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaa 42515602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 221
Target Start/End: Complemental strand, 31406787 - 31406670
Alignment:
Q  104 cgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaact-gaatcacatcggaatgagagggatcctgaggctgtacaggtat 202  Q
    |||||||||||||||||||||||||| | |||| ||| | |||||||  ||||| | ||||||||||  ||||||||||||||||| || || ||| | |    
T  31406787 cgaggctgatgagggcggggagtggttcagctcttggaa-gcttctaaacaaaaatcgaatcacatcaaaatgagagggatcctgaagccgtgcagatct 31406689  T
Q  203 gagactgcatggttgaaag 221  Q
    | ||||| |||||||||||    
T  31406688 gggactgaatggttgaaag 31406670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 6747747 - 6747686
Alignment:
Q  158 ctgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||| |||||||||||||||||||||| ||  |||||||| ||| ||||||||||    
T  6747747 ctgaatcacattggaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaa 6747686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 26957704 - 26957643
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    ||||||||||||||||||||||||| |||||||||  |||||||  ||| ||||||||||||    
T  26957704 gaatcacatcggaatgagagggatcttgaggctgtgtaggtatggaactacatggttgaaag 26957643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 2193255 - 2193314
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||| | || |||||||| |||||||||||||||    
T  2193255 gaatcacaccggaatgagagggttcctgagaccgtgcaggtatgggactgcatggttgaa 2193314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 28495853 - 28495912
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||| |||||| ||  ||||||| |||| ||||||||||    
T  28495853 gaatcacatcggaatgagagggatcttgaggccgtgtaggtatgggactacatggttgaa 28495912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 29039172 - 29039108
Alignment:
Q  155 aaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| ||||||||||||||||||||| |||||||||| ||  || |||| |||| ||||||||||    
T  29039172 aaaccgaatcacatcggaatgagaggcatcctgaggccgtgtagatatgtgactacatggttgaa 29039108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 46425740 - 46425800
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaa 220  Q
    |||||||||||||||||||||||||||||| |  |  ||||||| |||| |||||||||||    
T  46425740 gaatcacatcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaa 46425800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 28495755 - 28495696
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||| |||||||||||||||||||||||||  ||  ||||||| |||| ||||||||||    
T  28495755 gaatcccatcggaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaa 28495696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 35474268 - 35474209
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| |||||||||||||||||| |||  ||  |||||||||||| ||||||||||    
T  35474268 gaatcacaccggaatgagagggatccttaggtcgtgtaggtatgagactacatggttgaa 35474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 679812 - 679846
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgagg 190  Q
    |||||||||||||| ||||||||||||||||||||    
T  679812 aactgaatcacatcagaatgagagggatcctgagg 679846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 2611803 - 2611769
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgagg 190  Q
    |||||||||||||||||||||||||| ||||||||    
T  2611803 aactgaatcacatcggaatgagaggggtcctgagg 2611769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 36015557 - 36015499
Alignment:
Q  161 aatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||| |||||||||||||||||  |||| || || |||||||||| ||||||||||    
T  36015557 aatcacaccggaatgagagggatcccaaggcagtgcaagtatgagactccatggttgaa 36015499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 30966144 - 30966292
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30966144 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgagggtggggagtggtccggctcctggcatgcttctaggcaaaactgaatcgcatc 30966242  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  30966243 ggaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaa 30966292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 30966600 - 30966748
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30966600 tgtaacacctccgcttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcgcatc 30966698  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  30966699 ggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaa 30966748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 29259856 - 29259708
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  29259856 tgtaacgcctccgcttggtgggcatgtaacgctc-gaggctgatgagggcggggagtggtccggctcctggcatgcttctaggtaagactgaatcacatc 29259758  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||| | ||||| ||||| |||||||||||||||    
T  29259757 ggaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaa 29259708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 24818236 - 24818381
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||||||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24818236 tgtaacgcctgcgcttggtgggcatgtaacgccc-gaggctgatgagggtggggagtggtccggctcctggcatgcttctaggtaaaactgaatcacatc 24818334  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    |||||||||||||||||||||| || || ||||| ||||||||||||    
T  24818335 ggaatgagagggatcctgaggccgtgcatgtatgggactgcatggtt 24818381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 5400054 - 5399934
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    |||||||||||||||||| || |||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5400054 ttgtaacgcctccgcttggtgagcatgtaatgcct-gaggctgatgagggcagggagtggtccggctcctggcatgcttctaggcaaaattgaatcacat 5399956  T
Q  169 cggaatgagagggatcctgagg 190  Q
    |||||||||||||||| |||||    
T  5399955 cggaatgagagggatcttgagg 5399934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 82952 - 83075
Alignment:
Q  92 catgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggc 191  Q
    |||||||||||| || ||||| |||||||| |||||||| ||||||||||| ||||||||||||  ||||||||| ||| ||||||||||||||||||      
T  82952 catgtaacgccc-gaagctgacgagggcggagagtggtctggctcctggca-gcttctaggcaa--ctgaatcacgtcgaaatgagagggatcctgagat 83047  T
Q  192 tgtacaggtatgagactgcatggttgaa 219  Q
    ||| ||||||||||||| ||||||||||    
T  83048 tgtgcaggtatgagactacatggttgaa 83075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 1953067 - 1953213
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||| | ||||||| |||||||||| | | | |||| ||||||||||  |||||||||||||| ||| || |||| | |||||||| ||||||||||    
T  1953067 tgtaacgtccccgcttggtgggcatgtagcactc-gaggatgatgagggcaaggagtggtccggcttctgaca-gctttt-ggcaaaaccgaatcacatc 1953163  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||| |  || ||||||||||||||||||||||||    
T  1953164 ggaatgagagggatcctgaagtcgtgcaggtatgagactgcatggttgaa 1953213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 30962108 - 30961979
Alignment:
Q  88 tgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctg 187  Q
    |||||||||||||||| |||||||   |||| |||||||||| | |||||||||| ||||||||| ||||  |||||||||| ||||||||| |||||||    
T  30962108 tgggcatgtaacgccc-gaggctgtcaagggtggggagtggttcagctcctggca-gcttctaggaaaaatcgaatcacatcagaatgagagagatcctg 30962011  T
Q  188 aggctgtacaggtatgagactgcatggttgaa 219  Q
    | || ||  ||||||| || ||||||||||||    
T  30962010 aagccgtgtaggtatgggattgcatggttgaa 30961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 1912520 - 1912586
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaagt 222  Q
    ||||||||||||||||||||||||||||||||||| | |  |||||||||||| |||||||||||||    
T  1912520 aactgaatcacatcggaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagt 1912586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 41754284 - 41754347
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| ||||||||||||| || |||||| || ||||||||||||||||||||||||    
T  41754284 aactgaatcacaccggaatgagagggttcttgaggccgtgcaggtatgagactgcatggttgaa 41754347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 18099025 - 18098966
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||| |||||||||| ||  |||||||||||| ||||||||||    
T  18099025 gaatcacatcggaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaa 18098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 25338148 - 25338085
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| ||||||||||||| ||||||||  || |||||||| |||||||||||||||    
T  25338148 aactgaatcacaccggaatgagagggttcctgaggtcgtgcaggtatgggactgcatggttgaa 25338085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 33174957 - 33175016
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||||| ||  ||||||| |||| ||||||||||    
T  33174957 gaatcacatcggaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaa 33175016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 16379392 - 16379451
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||| || |||||||||||||||| ||||| || |||||||| |||||||||||||||    
T  16379392 gaatcaaattggaatgagagggatcccgaggccgtgcaggtatgggactgcatggttgaa 16379451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 18448065 - 18448006
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||| |||||||||||||| ||  ||||||| |||| ||||||||||    
T  18448065 gaatcacatcggaatgatagggatcctgaggccgtgtaggtatgtgactacatggttgaa 18448006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 25434203 - 25434144
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||||||||||||| || | |||||| |||| ||||||||||    
T  25434203 gaatcacaccggaatgagagggatcctgaggccgtgctggtatgggacttcatggttgaa 25434144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 27883073 - 27883014
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| || |||||||||||||||||||| || || |||||||||||||| ||||||    
T  27883073 gaatcacaccgaaatgagagggatcctgaggccgtgcatgtatgagactgcattgttgaa 27883014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 29804681 - 29804740
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||||||||||  |  ||||||| |||| ||||||||||    
T  29804681 gaatcacatcggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaa 29804740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 16378938 - 16378995
Alignment:
Q  162 atcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||| ||||||||||||||| | ||||| || || |||||||||||||||||||||    
T  16378938 atcacaccggaatgagagggattccgaggccgtgcaagtatgagactgcatggttgaa 16378995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 1707041 - 1707099
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||| |||||||||| ||||  |||||||||||| |||| |||||    
T  1707041 gaatcacatcggaatgaga-ggatcctgagactgtgtaggtatgagactacatgattgaa 1707099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 11388188 - 11388246
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||| ||||||||| || ||  |||||||||||| ||||||||||    
T  11388188 gaatcacatcggaatgaga-ggatcctgatgccgtgtaggtatgagactacatggttgaa 11388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Original strand, 33174504 - 33174532
Alignment:
Q  160 gaatcacatcggaatgagagggatcctga 188  Q
    |||||||||||||||||||||||||||||    
T  33174504 gaatcacatcggaatgagagggatcctga 33174532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 6e-61; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 22556445 - 22556594
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22556445 ttgtaacgcctccgcttggtgggcatgtaacgccc-gaggctaatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 22556543  T
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  22556544 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 22556594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 3887293 - 3887145
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  3887293 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccagctcctggcatgcttttaggcaaaactgaatcacatc 3887195  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  3887194 ggaatgagagtgatcctgaggccgtacaggtatgggactgcatggttgaa 3887145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 2474315 - 2474463
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  2474315 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccgactcctggcatgcttctaggaaaaactgaatcacatc 2474413  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| |||||| |||  |||||| |||| |||||||||||||||    
T  2474414 ggaatgagagagatcctaaggtcgtacagatatgggactgcatggttgaa 2474463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 2473869 - 2474017
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||| |||||||||| |||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  2473869 tgtaacacctccgcttggtgggcatgtaacgccc-gaagctgatgagggcggggagtggtccgactcctggcatgcttttaggaaaaactgaatcacatc 2473967  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||||||||    
T  2473968 ggaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaa 2474017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 3886837 - 3886693
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||    
T  3886837 tgtaacacctccgcttggtgggcatgtaacgccc-gaggctgatgagggcggggaatggtccggctcctagcatgcttctaggaaaaattgaatcacatc 3886739  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggt 215  Q
    |||||||||||||||||||||  ||||| ||||| |||||||||||    
T  3886738 ggaatgagagggatcctgaggtcgtacaagtatgggactgcatggt 3886693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 22556897 - 22557027
Alignment:
Q  88 tgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctg 187  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||    
T  22556897 tgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcctggcatgcttcttggcaaaactgaatcacatcggaatgagagagttcatg 22556995  T
Q  188 aggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| || |||||||| |||||||||||||||    
T  22556996 aggccgtgcaggtatgggactgcatggttgaa 22557027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 22975224 - 22975098
Alignment:
Q  92 catgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggc 191  Q
    |||||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22975224 catgtaacgccc-gaggctgatgagggcgaggagtggtccagctcttggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggc 22975126  T
Q  192 tgtacaggtatgagactgcatggttgaa 219  Q
     || |||||||| |||||||||||||||    
T  22975125 cgtgcaggtatgtgactgcatggttgaa 22975098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 1821817 - 1821964
Alignment:
Q  71 gtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 170  Q
    |||| ||||| ||||| ||||||||||||| |  |||||||| ||||| ||||||||||||||||| |||||||||||||||||||  ||||| ||||||    
T  1821817 gtaatgcctctgcttggtgggcatgtaacgtct-gaggctgacgagggtggggagtggtccggctcatggcatgcttctaggcaaagttgaattacatcg 1821915  T
Q  171 gaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||| |||| | |||  || ||||||||||||||||||||||||    
T  1821916 gaatgagagagatcttaaggtcgtgcaggtatgagactgcatggttgaa 1821964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 188990 - 189126
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| ||||||| |||| ||| ||||||||||||| |||| ||||||||||            ||||||||||||||||||||||||    
T  188990 tgtaacgcctccgcttggtgggcatataacaccc-gaggctgatgaggacgggaagtggtccgg------------ttctaggcaaaactgaatcacatc 189076  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  189077 ggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaa 189126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 30684792 - 30684660
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||| ||||| ||||| ||| ||||||||| || ||| ||||  ||||| || ||||||||| |||||||||||||| ||||||||||  |||||||||    
T  30684792 tgtaatgcctctgcttggtggtcatgtaacgtcc-gagactgacaagggcaggtagtggtccgactcctggcatgcttataggcaaaaccaaatcacatc 30684694  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatg 203  Q
    |||||||| |||||||||||| ||| || |||||    
T  30684693 ggaatgagggggatcctgaggttgtgcaagtatg 30684660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 30720041 - 30719909
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||||||||| |||| ||||||||||||| || ||| ||||  |||||  | ||||||||| |||||| || |||| | |||||||| ||||||||||    
T  30720041 tgtaacgcctccacttggtgggcatgtaacgtcc-gagactgacaagggcatgtagtggtccgactcctgacacgcttattggcaaaaccgaatcacatc 30719943  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatg 203  Q
     |||||||||||||||||||| ||| || |||||    
T  30719942 agaatgagagggatcctgaggttgtgcaagtatg 30719909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 8642182 - 8642122
Alignment:
Q  159 tgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||| |||||||||||||||| |||| || |||||||| |||||||||||||||    
T  8642182 tgaatcacatcagaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaa 8642122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 10927550 - 10927491
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||| |||||| ||  |||||||||||| ||||||||||    
T  10927550 gaatcacatcggaatgagagggatcttgaggccgtgtaggtatgagactacatggttgaa 10927491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 21886293 - 21886234
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| |||||||| ||| |||||||| |||||||||||||||    
T  21886293 gaatcacaccggaatgagagggttcctgaggttgtgcaggtatgggactgcatggttgaa 21886234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 34867789 - 34867848
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  34867789 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 34867848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 15513160 - 15513101
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||| | |||||||  ||||||| |||| ||||||||||    
T  15513160 gaatcacatcggaatgagagggatcattaggctgtgtaggtatgggactacatggttgaa 15513101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 39146934 - 39146997
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||| ||||||||||||| |||||| ||  ||||||| |||| ||||||||||    
T  39146934 aactgaatcacatcgaaatgagagggatcatgaggccgtgtaggtatgggactacatggttgaa 39146997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 4658144 - 4658080
Alignment:
Q  155 aaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||| ||| ||||||||| |||  | || ||||||||||||| ||||||||||    
T  4658144 aaactgaatcacatcgaaataagagggatcttgaaaccgtgcaggtatgagacttcatggttgaa 4658080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 8391473 - 8391409
Alignment:
Q  155 aaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| |||||||||||||||||||||||| ||||||| ||  ||| |||||||| |||| |||||    
T  8391473 aaaccgaatcacatcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaa 8391409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 2058853 - 2058775
Alignment:
Q  110 tgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaa-ctgaatcacatcggaatgagagggatcctga 188  Q
    |||||||||| | ||||||| || |||||| ||| ||||||||||||| | ||||||||||||| |||||| ||||||||    
T  2058853 tgatgagggcagagagtggttcgactcctgtcat-cttctaggcaaaaaccgaatcacatcggattgagagagatcctga 2058775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 10927093 - 10927034
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| ||||||||||||||||||||  ||  ||||||| |||| ||||||||||    
T  10927093 gaatcacatcagaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaa 10927034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 17445602 - 17445543
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||| |||||||||||||||||||| ||  ||| ||| |||| ||||||||||    
T  17445602 gaatcacatcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaa 17445543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 34371611 - 34371670
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| |||  |||| |||||||| || |||||||||||||||    
T  34371611 gaatcacaccggaatgagagggttcccaaggccgtacaggtgtgggactgcatggttgaa 34371670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 42788793 - 42788732
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    |||||||| ||||||||||||||||||||||| ||  |||  || |||| ||||||||||||    
T  42788793 gaatcacaacggaatgagagggatcctgaggccgtgtaggattgggactacatggttgaaag 42788732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 20039626 - 20039590
Alignment:
Q  155 aaactgaatcacatcggaatgagagggatcctgaggc 191  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  20039626 aaaccgaatcacatcggaatgagagggatcatgaggc 20039590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 142510 - 142362
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  142510 tgtaacgcctccgcttggtgggcatgtaacgccc-gaggctgatgaggacggggagtggtccggctcctggcatgcttctaggaaaaactgaatcacatc 142412  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| || |||||||| |||| ||||||||||    
T  142411 ggaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaa 142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 107699 - 107551
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  107699 tgtaacgcctccgcttggtgggcatgtaacaccc-gaggctgatgaggacggggagtggtccggttcctggcatgcttctaggaaaaactgaatcacatc 107601  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  107600 ggaatgagagggattctgaggccgtacaggtatgggactgcatggttgaa 107551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 10210 - 10355
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||||||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10210 tgtaacgcctgcgcttggtgggcatgtaacgccc-gaggctgatgagggtggggagtggtccggctcctggcatgcttctaggtaaaactgaatcacatc 10308  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    |||||||||||||||||||||| || || ||||| ||||||||||||    
T  10309 ggaatgagagggatcctgaggccgtgcatgtatgggactgcatggtt 10355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 9e-54; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 31284513 - 31284364
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    |||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31284513 ttgtaacgcctccgcttagtgggcatgtatcgccc-gaggctgatgagggcggggagtggtccgactcctggcatgcttctaggcaaaactgaatcacat 31284415  T
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||| |||||  || |||||||| |||||||||||||||    
T  31284414 cggaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaa 31284364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 12820554 - 12820702
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||  ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12820554 tgtaacgctcccgcttggtgggcatgtaacgctc-gaggctgatgagggcggggagtggtccggctccttgcatgcttctaggcaaaactgaatcacatc 12820652  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||| || |||| ||||||||||| |||||||||||||||    
T  12820653 ggaatgagagggattctaaggccgtacaggtatgggactgcatggttgaa 12820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 32388967 - 32388848
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32388967 tgtaacgcctccgcttagtgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaattgaatcacatc 32388869  T
Q  170 ggaatgagagggatcctgagg 190  Q
    |||||||||||||||||||||    
T  32388868 ggaatgagagggatcctgagg 32388848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 41472214 - 41472359
Alignment:
Q  73 aacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcgga 172  Q
    |||||||| | ||| ||||||||||||||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  41472214 aacgcctctgattggtgggcatgtaacgccca-aggctgaagagggtggtgagtggtccggctcctggcatgcatctaggcaagactgaatcacatcgga 41472312  T
Q  173 atgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  41472313 atgagagggatcctgaggtcgtacaggtatgagactgcatggttgaa 41472359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 41473907 - 41474052
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  41473907 tgtaacgcctccgcttgatgggcatgtaacgcct-gaggctgatgagggcggggagtggtccggctcctagcatgcttctcggcaagactgaatcacatc 41474005  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    | ||||||||||||| |||||  || |||||||| ||||| ||||||    
T  41474006 gaaatgagagggatcttgaggtcgttcaggtatgtgactggatggtt 41474052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 25248019 - 25248166
Alignment:
Q  68 attgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcaca 167  Q
    ||||||||||||||||||||||||   ||||||||| |||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  25248019 attgtaacgcctccgcttgatgggttagtaacgccc-gaggctaatgagggtggggagtggtcaggctcctggcatgcttataggcaaaactgaatcaca 25248117  T
Q  168 tcggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||||    
T  25248118 tcggaatgagagggattctaaggccgtgcaggtatgggactgcatggtt 25248166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 8067221 - 8067338
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| || ||||||    
T  8067221 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaagcaaaattgaatcacatcggaatgagagggaccctgaggccgtgcaggta 8067320  T
Q  202 tgagactgcatggttgaa 219  Q
    || || ||||||||||||    
T  8067321 tgggattgcatggttgaa 8067338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 7477101 - 7477249
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    ||||||||||| |||||| |||| |||||| || | ||||||||||||| |||||||||||||| ||||||||| | |||||||||||||  ||||||||    
T  7477101 ttgtaacgccttcgcttggtgggtatgtaatgctc-gaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacat 7477198  T
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||| | |  || ||||||||||||||||||||||||    
T  7477199 cggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaa 7477249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 27187535 - 27187421
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    ||||||||||||||||||||  ||||||||||||||| ||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||| || |||    
T  27187535 cccgaggctgatgagggcggcaagtggtccggctcctagcaagcttctaggaaaaattgaatcacattggaatgagagggatcctgaggctgtgcatgta 27187436  T
Q  202 tgagactgcatggtt 216  Q
    || ||||||||||||    
T  27187435 tgggactgcatggtt 27187421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 7493791 - 7493939
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    ||||||||||| |||||| |||| |||||| || | ||||||||||||| ||||||||||||||||| |||||  |||||||||||||||  ||||||||    
T  7493791 ttgtaacgccttcgcttggtgggtatgtaatgctc-gaggctgatgaggacggggagtggtccggcttctggcg-gcttctaggcaaaacataatcacat 7493888  T
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||| |||||| | |  || ||||||||||||||||||||||||    
T  7493889 cggaatgagagagatcctaaagtcgtgcaggtatgagactgcatggttgaa 7493939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 30529682 - 30529745
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  30529682 aactgaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaa 30529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 28561741 - 28561804
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  28561741 aactgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 28561804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 39653159 - 39653222
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  39653159 aactgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 39653222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 14813948 - 14814004
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    |||||||| ||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  14813948 gaatcacaccggaatgagagggttcctgaggccgtgtaggtatgagactgcatggtt 14814004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 16811380 - 16811439
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||||| ||  |||| || |||| ||||||||||    
T  16811380 gaatcacatcggaatgagagggatcctgaggccgtgtaggtttgggactccatggttgaa 16811439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 39640936 - 39640995
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||| ||||||||| ||||||||||| ||  |||||||||||| ||||||||||    
T  39640936 gaatcacatcagaatgagagagatcctgaggccgtgtaggtatgagactacatggttgaa 39640995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 16810924 - 16810982
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttga 218  Q
    ||||||||||||||||||||||||| |||||| ||  || |||| ||||||||||||||    
T  16810924 gaatcacatcggaatgagagggatcttgaggccgtgtagatatgggactgcatggttga 16810982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 25230851 - 25230793
Alignment:
Q  161 aatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||||||||||||  |  |||||||||||| ||||||||||    
T  25230851 aatcacattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaa 25230793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 25238438 - 25238380
Alignment:
Q  161 aatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||||||||||||  |  |||||||||||| ||||||||||    
T  25238438 aatcacattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaa 25238380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 25230394 - 25230336
Alignment:
Q  161 aatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||| ||||||||||||||||  ||  ||||||| |||| ||||||||||    
T  25230394 aatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaa 25230336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 25237981 - 25237923
Alignment:
Q  161 aatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||| ||||||||||||||||  ||  ||||||| |||| ||||||||||    
T  25237981 aatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaa 25237923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 2911094 - 2911155
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    |||||||| | ||||||||||||||| ||||| || |||||||| |||  ||||||||||||    
T  2911094 gaatcacacctgaatgagagggatcccgaggccgtgcaggtatgggaccacatggttgaaag 2911155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 162915 - 162766
Alignment:
Q  69 ttgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 168  Q
    ||||||||||||| |||| ||| ||||||| |||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  162915 ttgtaacgcctcctcttggtggacatgtaatgccc-gaggctgatgagggtggggagtggtctggctcctgacatgcttctaggcaaaactgaattacat 162817  T
Q  169 cggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  162816 cggaatgagagggatcctgaggccgtacaggtatgtgactgcatggttgaa 162766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 70019 - 69903
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    ||||||||||  ||||| || |||||||| | || |||| | ||||||||| ||| | || |||||||  ||||||||||||||| || || | ||||||    
T  70019 cccgaggctggcgagggtggagagtggtctgacttctggaa-gcttctaggtaaagccgattcacatcataatgagagggatcctaagactatgcaggta 69921  T
Q  202 tgagactgcatggttgaa 219  Q
    ||||||||||| ||||||    
T  69920 tgagactgcatcgttgaa 69903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 105630 - 105778
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||| |||  ||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  105630 tgtaacgcctccgcttggtgggcatgtaacaccca-aggctgatgagggcggggagtggtctggttcctggcatgcttctaggcaaaactaaatcacatc 105728  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| |||||||||||  |||||| |||||||    
T  105729 ggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaa 105778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 35761148 - 35761002
Alignment:
Q  72 taacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcgg 171  Q
    ||||||||||||||| |||| |||||||| || |||||||||||||| || |||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  35761148 taacgcctccgcttggtgggtatgtaacgtcc-gaggctgatgagggtggcgagtggtctggctcctggcatgcttctaggaaaaattgaatcacatcgg 35761050  T
Q  172 aatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||    
T  35761049 aatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaa 35761002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 35759844 - 35759696
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    |||||||||||| |||| |||| ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||||||    
T  35759844 tgtaacgcctccacttggtgggtatgtaacgccc-gaggctgatgacggcggggagtggtctggctcctagcatgcttctaggaaaaattgaatcacatc 35759746  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||||    
T  35759745 ggaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaa 35759696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 2328225 - 2328373
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||||||||||||||| |||||||||||| |||  |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||     
T  2328225 tgtaacgcctccgcttggtgggcatgtaacaccca-aggctgatgagggcggagagtggtctggctcctggcatgcttttaggcaaaactgaatcacatt 2328323  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||  ||  |||||| ||||||||||| |||||||||||||||    
T  2328324 ggaatgagagaaattatgaggccgtacaggtatgggactgcatggttgaa 2328373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 20061409 - 20061279
Alignment:
Q  88 tgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctg 187  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||||| |||||||||||||||||    
T  20061409 tgggcatgtaacgccc-gaggctgatgagggcggggagtggtccggctcttggcaatcttctaggctaaactgaatcacatcagaatgagagggatcctg 20061311  T
Q  188 aggctgtacaggtatgagactgcatggttgaa 219  Q
    |||  || |||||||| |||||||||||||||    
T  20061310 aggtcgtgcaggtatgggactgcatggttgaa 20061279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 46693942 - 46693857
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaa-ctgaatcacatcggaatgagagggatcct 186  Q
    ||||||||||||||||||  ||||||||||| ||| || |||||||||||||||||  ||||||||||||||||||||||||||||    
T  46693942 cccgaggctgatgagggctaggagtggtccgactcttgtcatgcttctaggcaaaagttgaatcacatcggaatgagagggatcct 46693857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 2634909 - 2634982
Alignment:
Q  145 cttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||| | ||||||||||||||||||||||||| ||||| ||| |||||||| |||||||||||||||    
T  2634909 cttctaggcaaatc-gaatcacatcggaatgagagggatcatgaggttgtgcaggtatgggactgcatggttgaa 2634982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 23180649 - 23180753
Alignment:
Q  78 ctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgag 177  Q
    ||||||||| |||||||||||||| | | ||||||||| |||||||||||||||| ||||| | | |||| |||| |||| |||||||||| ||||||||    
T  23180649 ctccgcttggtgggcatgtaacgctc-gtggctgatgaaggcggggagtggtccgactcctagta-gcttataggaaaaattgaatcacattggaatgag 23180746  T
Q  178 agggatc 184  Q
    |||||||    
T  23180747 agggatc 23180753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 43057670 - 43057611
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||    
T  43057670 gaatcacatcggaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaa 43057611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 20057870 - 20057805
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    |||||||||||| || |||||||||| ||||||||| || |||||||| |||||||||||||||||    
T  20057870 aactgaatcacaccgaaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaag 20057805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20054227 - 20054168
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  20054227 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 20054168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20054683 - 20054624
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  20054683 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 20054624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20055139 - 20055080
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  20055139 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 20055080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20055595 - 20055536
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  20055595 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 20055536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20056051 - 20055992
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  20056051 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 20055992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20056507 - 20056448
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  20056507 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 20056448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20057410 - 20057351
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  20057410 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaa 20057351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20845808 - 20845749
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| |||||||||| || ||||||||| || ||||||||||||||||||||||||    
T  20845808 gaatcacaccggaatgagacggttcctgaggccgtgcaggtatgagactgcatggttgaa 20845749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 30873097 - 30873038
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||||| ||||||| || |||||||||||||| |||||||||    
T  30873097 gaatcacaccggaatgagagggattctgaggccgtgcaggtatgagactgtatggttgaa 30873038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 50003222 - 50003166
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggtt 216  Q
    ||||||||||||||||||||||||||||||||  | |||||||  ||||||||||||    
T  50003222 gaatcacatcggaatgagagggatcctgaggccatgcaggtataggactgcatggtt 50003166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 38340905 - 38340964
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| |||||||||| || ||||||||| || |||||||| |||||||||||||||    
T  38340905 gaatcacaccggaatgagatggttcctgaggccgtgcaggtatgggactgcatggttgaa 38340964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 50002854 - 50002795
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||| ||||||||||| ||  ||| ||| |||||||||||||||    
T  50002854 gaatcacatcggaatgagagagatcctgaggccgtgtaggcatgggactgcatggttgaa 50002795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 16907206 - 16907294
Alignment:
Q  131 cggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    |||||||||||| ||||||||||||| |  ||||| |||  ||||||||||||  |||| |||| ||||||||| ||||||||||||||||    
T  16907206 cggctcctggca-gcttctaggcaaacca-aatcatatcaaaatgagagggattttgagactgtgcaggtatgaaactgcatggttgaaag 16907294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 31822809 - 31822751
Alignment:
Q  161 aatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||| |||||||||||||| |||||| ||  |||||||||||| ||||||||||    
T  31822809 aatcacatcagaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaa 31822751  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 191
Target Start/End: Complemental strand, 16452080 - 16452049
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggc 191  Q
    ||||||||||||||||||||||||||||||||    
T  16452080 gaatcacatcggaatgagagggatcctgaggc 16452049  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 191
Target Start/End: Complemental strand, 16461233 - 16461202
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggc 191  Q
    ||||||||||||||||||||||||||||||||    
T  16461233 gaatcacatcggaatgagagggatcctgaggc 16461202  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 44116561 - 44116592
Alignment:
Q  1 tacccaaagaactaccatcttcgttaagcttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  44116561 tacccaaagaactaccatcttcgttaagcttg 44116592  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 50002432 - 50002373
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||||||||||||| |||||| ||  ||| ||| |||| ||||||||||    
T  50002432 gaatcacatcggaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaa 50002373  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 7548085 - 7548143
Alignment:
Q  155 aaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatg 213  Q
    |||||||||||||| | ||||||||||||| |||||| ||  |||||||||||| ||||    
T  7548085 aaactgaatcacattgcaatgagagggatcatgaggccgtgtaggtatgagactacatg 7548143  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 61
Target Start/End: Original strand, 44116626 - 44116656
Alignment:
Q  31 tgctgggtttagttttagtttctcttcccat 61  Q
    |||||||||||||||||||||||||||||||    
T  44116626 tgctgggtttagttttagtttctcttcccat 44116656  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 7204965 - 7204920
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    |||||||||||||||||||||||| |||| |||| || ||||||||    
T  7204965 aactgaatcacatcggaatgagagcgatcatgagactttacaggta 7204920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 51373010 - 51372962
Alignment:
Q  171 gaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||||||| |||||  |||||||||| ||||| |||||||||    
T  51373010 gaatgagagggatcccgaggccatacaggtatgtgactgtatggttgaa 51372962  T

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Target: scaffold0322 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 87 - 219
Target Start/End: Complemental strand, 18340 - 18209
Alignment:
Q  87 atgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcct 186  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  18340 atgggcatgtaacgctc-gaggcggatgagggcggggagtggtccggctcctggcatgcttctaggcaacactgaatcacatcggaatgagagggatcca 18242  T
Q  187 gaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||| || |||||||| |||||||||||||||    
T  18241 gaggccgtgcaggtatgggactgcatggttgaa 18209  T

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Target: scaffold0322; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 18958 - 19024
Alignment:
Q  153 caaaactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||| ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||    
T  18958 caaaactaaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaa 19024  T

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Target: scaffold0040 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 2446 - 2298
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 169  Q
    ||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| ||||||||||||||||    
T  2446 tgtaatgcctccgcttggtgggtatgtaacgccc-gaggctgatgagggcggggagtggtccagcttctagcatgcttctaggaaaaactgaatcacatc 2348  T
Q  170 ggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||| ||||||| |||| || |||||||| |||| ||||||||||    
T  2347 ggaatgagaaggatcctaaggccgtgcaggtatgggactacatggttgaa 2298  T

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Target: scaffold0040; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 2606 - 2554
Alignment:
Q  70 tgtaacgcctccgcttgatgggcatgtaacgccccgaggctgatgagggcgggg 123  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  2606 tgtaacgcctccgcttggtgggcatgtaacg-cccgaggctgatgagggcgggg 2554  T

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Target: scaffold0005 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 245019 - 245144
Alignment:
Q  93 atgtaacgccccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggct 192  Q
    |||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||  |||  |||||||||||||||||||||||||||||||||     
T  245019 atgtaacgccca-aggctgatgagggcggggagtggtccggctcttggcatgcatctagaaaaatatgaatcacatcggaatgagagggatcctgaggcc 245117  T
Q  193 gtacaggtatgagactgcatggttgaa 219  Q
     |  ||||||| |||| ||||||||||    
T  245118 atgtaggtatgggactacatggttgaa 245144  T

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Target: scaffold0005; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 245456 - 245573
Alignment:
Q  102 cccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggctgtacaggta 201  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||  ||||| ||||||| |||| | ||  |||||    
T  245456 cccgaggctgatgagggcggggagtggtccggctcctggcttggttctaggaaaaactgaatcacatcataatgaaagggatcttgagtccgtgtaggta 245555  T
Q  202 tgagactgcatggttgaa 219  Q
    || |||| ||||||||||    
T  245556 tgggacttcatggttgaa 245573  T

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Target: scaffold0047 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 18285 - 18222
Alignment:
Q  156 aactgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| |||| ||| ||||||    
T  18285 aactgaatcacatcggaatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaa 18222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 17745 - 17686
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||| ||||| ||||||||||||||||||||| ||  ||||||| |||| ||||||||||    
T  17745 gaatgacatcagaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaa 17686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 2198 - 2139
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| | |||||| |||| ||||||||| || ||||||||||||||||||||||||    
T  2198 gaatcacaccagaatgaaagggttcctgaggccgtgcaggtatgagactgcatggttgaa 2139  T

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Target: scaffold0333 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 4560 - 4619
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||||||||| ||||||| |||||||||  | |||||||| |||||||||||||||    
T  4560 gaatcacatcggaaggagagggttcctgaggccatgcaggtatgggactgcatggttgaa 4619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 5015 - 5074
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| ||||||||||||| |||||||||  | |||||||| |||||||||||||||    
T  5015 gaatcacaccggaatgagagggttcctgaggccatgcaggtatgggactgcatggttgaa 5074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 2741 - 2800
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||| |||| ||||||||||    
T  2741 gaatcacatcgaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaa 2800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 4130 - 4070
Alignment:
Q  159 tgaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    ||||||||| | ||||||||||||||| ||||| || |||||||| |||||||| ||||||    
T  4130 tgaatcacaccagaatgagagggatcccgaggccgtgcaggtatgggactgcattgttgaa 4070  T

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Target: scaffold0557 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 191
Target Start/End: Original strand, 749 - 780
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggc 191  Q
    ||||||||||||||||||||||||||||||||    
T  749 gaatcacatcggaatgagagggatcctgaggc 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 1219 - 1278
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| |||||||||| || |||||||||  | |||||||| |||||||||||||||    
T  1219 gaatcacaccggaatgagacggttcctgaggccatgcaggtatgggactgcatggttgaa 1278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 23672 - 23731
Alignment:
Q  160 gaatcacatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaa 219  Q
    |||||||| || |||||||||| || |||||| || |||||||| |||||||||||||||    
T  23672 gaatcacaccgaaatgagagggttcttgaggccgtgcaggtatgggactgcatggttgaa 23731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 1058 - 1002
Alignment:
Q  165 acatcggaatgagagggatcctgaggctgtacaggtatgagactgcatggttgaaag 221  Q
    ||||| ||||||||||| || |||| | || ||| ||||||||||||||||||||||    
T  1058 acatcagaatgagagggttcttgagacagtgcagatatgagactgcatggttgaaag 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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