View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17596_low_70 (Length: 217)
Name: NF17596_low_70
Description: NF17596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17596_low_70 |
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Alignment Details
Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 10342509 - 10342692
Alignment:
| Q |
24 |
ataaaatatatattctcttaccaaatattaaggaaaaagtctatgctttgaattggaatatcttcttccatacgtgaaatacagtaaaaactgta----- |
118 |
Q |
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| T |
10342509 |
ataaaatatatattctctaaccaaatattgaggaataagtctatgctttgaattggaatatcttcatccatacgtgaaatacagtaaaaactgtatatat |
10342608 |
T |
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| Q |
119 |
tatattaattgtgtgaaactgtggatacactgtatcttcaatctgattatattctaattgcatttctaagaacatggacacagg |
202 |
Q |
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| T |
10342609 |
tatattaattgtgtgaaactgtggatacactgtatcttcaatctgattatattctaattgcatttctaagaacatggacacagg |
10342692 |
T |
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