View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17597_high_24 (Length: 330)

Name: NF17597_high_24
Description: NF17597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17597_high_24
NF17597_high_24
[»] chr8 (18 HSPs)
chr8 (17-289)||(4078705-4078983)
chr8 (79-277)||(34501095-34501290)
chr8 (79-282)||(33817508-33817707)
chr8 (79-282)||(26426778-26426977)
chr8 (79-282)||(37233486-37233690)
chr8 (79-282)||(21405721-21405920)
chr8 (79-282)||(21800213-21800412)
chr8 (79-282)||(29601133-29601333)
chr8 (79-282)||(10953580-10953784)
chr8 (79-282)||(10961585-10961789)
chr8 (160-282)||(10582187-10582309)
chr8 (79-277)||(33317602-33317795)
chr8 (79-279)||(14123217-14123412)
chr8 (79-282)||(14122253-14122451)
chr8 (160-278)||(10334599-10334717)
chr8 (79-139)||(10582098-10582158)
chr8 (17-76)||(4101469-4101528)
chr8 (79-132)||(10334730-10334783)
[»] chr6 (5 HSPs)
chr6 (79-282)||(23219415-23219615)
chr6 (79-277)||(14206579-14206774)
chr6 (79-277)||(4486624-4486819)
chr6 (83-276)||(31715348-31715537)
chr6 (79-139)||(34527062-34527122)
[»] chr3 (23 HSPs)
chr3 (79-289)||(24596242-24596461)
chr3 (79-282)||(10695808-10696007)
chr3 (79-282)||(43171577-43171776)
chr3 (79-282)||(14242764-14242968)
chr3 (79-282)||(53175754-53175950)
chr3 (79-282)||(39625355-39625554)
chr3 (79-282)||(45906057-45906256)
chr3 (79-282)||(52722456-52722654)
chr3 (79-282)||(10475822-10476028)
chr3 (79-282)||(52553327-52553524)
chr3 (79-282)||(8034381-8034583)
chr3 (160-279)||(40690582-40690701)
chr3 (79-282)||(4970965-4971170)
chr3 (160-282)||(38572773-38572895)
chr3 (79-282)||(50517063-50517263)
chr3 (160-282)||(26406941-26407063)
chr3 (79-282)||(24656930-24657129)
chr3 (79-282)||(38834461-38834654)
chr3 (160-271)||(54244984-54245095)
chr3 (79-139)||(38572924-38572984)
chr3 (79-139)||(40690497-40690557)
chr3 (79-139)||(17332083-17332143)
chr3 (178-214)||(24656833-24656869)
[»] chr7 (24 HSPs)
chr7 (79-277)||(46940019-46940213)
chr7 (79-278)||(6587596-6587791)
chr7 (79-282)||(38150390-38150589)
chr7 (79-282)||(16188985-16189187)
chr7 (79-282)||(1783559-1783758)
chr7 (79-282)||(36333000-36333205)
chr7 (79-282)||(29665970-29666168)
chr7 (79-282)||(19893490-19893691)
chr7 (79-282)||(32801636-32801834)
chr7 (79-282)||(3175995-3176191)
chr7 (79-282)||(27895084-27895282)
chr7 (79-282)||(47748918-47749117)
chr7 (160-282)||(7835080-7835200)
chr7 (79-282)||(38098353-38098552)
chr7 (79-282)||(28147055-28147254)
chr7 (79-264)||(29172246-29172427)
chr7 (82-278)||(23979916-23980111)
chr7 (160-271)||(7118146-7118257)
chr7 (160-282)||(44073833-44073956)
chr7 (79-139)||(7835239-7835299)
chr7 (79-139)||(47262807-47262867)
chr7 (79-136)||(7118278-7118335)
chr7 (79-132)||(35407125-35407178)
chr7 (79-139)||(38075804-38075864)
[»] chr2 (13 HSPs)
chr2 (79-282)||(45463549-45463751)
chr2 (79-282)||(4391667-4391867)
chr2 (79-282)||(5003456-5003656)
chr2 (79-282)||(34599573-34599771)
chr2 (80-282)||(16492421-16492619)
chr2 (79-282)||(25459479-25459675)
chr2 (79-282)||(28439785-28439983)
chr2 (79-282)||(12131377-12131577)
chr2 (79-282)||(15381814-15382009)
chr2 (81-282)||(38903352-38903551)
chr2 (79-142)||(38033634-38033697)
chr2 (180-283)||(34132343-34132448)
chr2 (160-205)||(38033576-38033621)
[»] chr4 (19 HSPs)
chr4 (79-282)||(46580291-46580490)
chr4 (79-282)||(43100399-43100603)
chr4 (79-282)||(53227976-53228176)
chr4 (79-280)||(13229633-13229831)
chr4 (79-277)||(1121327-1121520)
chr4 (83-282)||(6890972-6891171)
chr4 (79-282)||(28714301-28714501)
chr4 (79-282)||(40219016-40219217)
chr4 (160-282)||(575885-576007)
chr4 (160-278)||(1124163-1124281)
chr4 (79-282)||(21629417-21629616)
chr4 (79-282)||(26619165-26619365)
chr4 (160-282)||(50435899-50436021)
chr4 (160-282)||(48832892-48833014)
chr4 (79-251)||(32129155-32129324)
chr4 (77-282)||(56038079-56038280)
chr4 (79-137)||(48833042-48833100)
chr4 (79-133)||(50435833-50435887)
chr4 (79-136)||(576023-576080)
[»] chr5 (10 HSPs)
chr5 (79-277)||(25764210-25764404)
chr5 (79-282)||(3466328-3466530)
chr5 (79-282)||(19858117-19858316)
chr5 (79-282)||(21145723-21145921)
chr5 (83-282)||(794517-794711)
chr5 (79-281)||(22527444-22527642)
chr5 (79-281)||(3514314-3514512)
chr5 (79-139)||(9717281-9717341)
chr5 (79-139)||(15927351-15927411)
chr5 (79-139)||(41284480-41284540)
[»] chr1 (12 HSPs)
chr1 (72-282)||(13832669-13832876)
chr1 (79-282)||(37350509-37350709)
chr1 (74-274)||(7351310-7351510)
chr1 (79-282)||(42434537-42434736)
chr1 (79-282)||(9411951-9412151)
chr1 (91-282)||(40535510-40535697)
chr1 (79-282)||(29824192-29824397)
chr1 (79-278)||(31924483-31924677)
chr1 (79-282)||(40977012-40977210)
chr1 (79-139)||(40535445-40535505)
chr1 (79-146)||(27286058-27286125)
chr1 (79-139)||(1804238-1804298)
[»] scaffold0054 (1 HSPs)
scaffold0054 (79-281)||(30373-30572)
[»] scaffold0208 (1 HSPs)
scaffold0208 (79-275)||(2925-3119)


Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 4078705 - 4078983
Alignment:
Q  17 agcatgaatttgaattgtttgttactttgtgcaagtttatttcattcattgttccttagtctgggccggcccatagcccgttgaggctgggcaacgacac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  4078705 agcatgaatttgaattgtttgttactttgtgcaagtttatttcattcattgttccttagtctgggccggcccatagcccgtcgaggctgggcaacgatac 4078804  T
Q  117 cgggcctccaattttttggggcctaaaataannnnnnnnnnnn------atatgtaagacacgaatataatggttatatatctattaaaagcaaattaat 210  Q
    ||||||| |||||||||||||||||||||||                  |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4078805 cgggccttcaattttttggggcctaaaataattttttttttttttttttatatgtaagacacgaaaataatggttatatatctattaaaagcaaattaat 4078904  T
Q  211 ttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagacccacttattta 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4078905 ttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagacccacttattta 4078983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 79 - 277
Target Start/End: Complemental strand, 34501290 - 34501095
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||| |||||| ||    
T  34501290 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata---ttttttttttatatgtaagccacgaaaat 34501194  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  34501193 aatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggcatggccactttttgttgagtgtgaggtcatgtgttcaaga 34501095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 33817707 - 33817508
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||  |||||             ||||||||| |||||| ||    
T  33817707 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctctaattttttggggcccgaaata----tttttttttatatgtaagccacgaaaat 33817612  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  33817611 aatggttatatatctattaaaagcaaattaattaaatttgtacagcttgctttagtggtgtgacaactttttgttgagtgtgaggtcatgtgttcaagac 33817512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 26426977 - 26426778
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||| || ||| ||    
T  26426977 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagccatgaaaat 26426882  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  26426881 aatggttatatatctattaaaagcaaattaattcaatctgtacagcttgctttagtggcatggtcactttttgttgagtgtgaggtcatgtgttcaagac 26426782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 37233486 - 37233690
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaa-ataannnnnnnnnnnnatatgtaagacacgaata 177  Q
    ||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||||||||| ||| ||              ||||||||| |||||| |    
T  37233486 gggccggtccatagcccgtcgaggctgggcgacgacactgggcctccaattttttggggcccaaatatttttttttatttttatatgtaagccacgaaaa 37233585  T
Q  178 taatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37233586 taatggttatatatctattaaaagcaaattaatttgatttgtaaagcttgctttagtggtgtggccactttttgatgagtgtgaggtcatgtgttcaaga 37233685  T
Q  278 cccac 282  Q
    |||||    
T  37233686 cccac 37233690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 21405920 - 21405721
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| ||||||             |||||||||||| ||| ||    
T  21405920 gggccggcccatagcccgtcgaggctgggcgacaacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagacatgaaaat 21405825  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  21405824 aatggttatatatctattaaaagcaaattttttcaatttgtacagcttgctttagtggcatggccactttttgttaagtgtgaggtcatgtgttcaagac 21405725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 21800412 - 21800213
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| ||||||             |||||||||||| ||| ||    
T  21800412 gggccggcccatagcccgtcgaggctgggcgacaacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagacatgaaaat 21800317  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  21800316 aatggttatatatctattaaaagcaaattttttcaatttgtacagcttgctttagtggcatggccactttttgttaagtgtgaggtcatgtgttcaagac 21800217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 29601333 - 29601133
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||             |||||||||||||||| ||    
T  29601333 gggccggcccatagcccgtcgaggctgggcgacgacaccgggtctccaattttttggggcccaaaata---tattttttttatatgtaagacacgaaaat 29601237  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||    
T  29601236 aatgattatatatctattaaaagcaaatttattcaatttgtacagcttgctttagtggcatggctattttttgttgagtgtgaggtcatgtgttcaagac 29601137  T
Q  279 ccac 282  Q
    ||||    
T  29601136 ccac 29601133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 10953784 - 10953580
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnn-atatgtaagacacgaata 177  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |               ||||||||| |||||| |    
T  10953784 gggccggtccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcctaaatttttttatttttttttatatgtaagccacgaaaa 10953685  T
Q  178 taatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||    
T  10953684 taatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggcatggccattttttgatgagtgtgaggtcatgtgttcaaga 10953585  T
Q  278 cccac 282  Q
    |||||    
T  10953584 cccac 10953580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 10961789 - 10961585
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnn-atatgtaagacacgaata 177  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |               ||||||||| |||||| |    
T  10961789 gggccggtccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcctaaatttttttatttttttttatatgtaagccacgaaaa 10961690  T
Q  178 taatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||    
T  10961689 taatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggcatggccattttttgatgagtgtgaggtcatgtgttcaaga 10961590  T
Q  278 cccac 282  Q
    |||||    
T  10961589 cccac 10961585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 10582187 - 10582309
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |  || |||||||| |||||||    
T  10582187 atatgtaagccacgaaaataatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggcgcagctactttttgatgagtgt 10582286  T
Q  260 gaggtcatgtgttcaagacccac 282  Q
    |||||||||||||||||||||||    
T  10582287 gaggtcatgtgttcaagacccac 10582309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 79 - 277
Target Start/End: Original strand, 33317602 - 33317795
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||             | |||||||||| ||| ||    
T  33317602 gggccggcctatagcccgttgaggctgggcgacgacaccgcgcctccaattttttgaggcccaaaata-----ttttttttaaatgtaagacatgaaaat 33317696  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||||| ||||||| | ||| ||||||||||||||||||||||||||    
T  33317697 aatggttatatatgtattaaaagcaaattattctaatttgtacagcttgcttcagtggcgtggccaatatttattgagtgtgaggtcatgtgttcaaga 33317795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 279
Target Start/End: Complemental strand, 14123412 - 14123217
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||             ||||| ||||||| || ||    
T  14123412 gggccggcccatagcccgtcgaggctgggcgacgacaccaggcctccaattttttggggcccaaaata-----ttttttttatatgcaagacacaaaaat 14123318  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||| |||||||||||||||||||||||||| || ||| ||| ||||||||||||||||   |||  ||||||||||||||||||||||| ||||||||||    
T  14123317 aattgttatatatctattaaaagcaaattatttcaatatgtgcagcttgctttagtggcaaggctgctttttgttgagtgtgaggtcatatgttcaagac 14123218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 14122451 - 14122253
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||  |||||||||| |||||||||||||||| || ||||||             ||||| |||||||||| ||    
T  14122451 gggccggcccatagcccgtcgaggctgggtgacgacaccggacctccaattttttgggacccaaaata-----ttttttttatatgcaagacacgaaaat 14122357  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||| ||| || || ||||||| |||||||||| |||||  | | | ||||||||||||||||||||||||||||||||||    
T  14122356 aatggttatatatctattaaaagaaaactatttcaatttgtgcagcttgcttcagtggcattgtcgctttttgttgagtgtgaggtcatgtgttcaagac 14122257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 10334717 - 10334599
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||  ||||||||||||| |||||||    
T  10334717 atatgtaagccatgaaaataatggttatatatctattaaaagcaaattaattcaaattgtacagtttgctttagtggcatggccactttttgatgagtgt 10334618  T
Q  260 gaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||    
T  10334617 gaggtcatgtgttcaagac 10334599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 10582098 - 10582158
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  10582098 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcc 10582158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 4101469 - 4101528
Alignment:
Q  17 agcatgaatttgaattgtttgttactttgtgcaagtttatttcattcattgttccttagt 76  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  4101469 agcatgaatttgaattgtttgttactttgatcaagtttatttcatccattgttccttagt 4101528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 10334783 - 10334730
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttt 132  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  10334783 gggccggcccatagcccttcgaggctgggcgacgacaccgggcctccaattttt 10334730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 2e-68; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 23219615 - 23219415
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||  ||||||             |||||||||||||||| ||    
T  23219615 gggccggcccatagcccttcgaggctgggcgacgacaccgggcctccaattttttggggcacaaaata---tattttttttatatgtaagacacgaaaat 23219519  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23219518 aatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 23219419  T
Q  279 ccac 282  Q
    ||||    
T  23219418 ccac 23219415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 79 - 277
Target Start/End: Original strand, 14206579 - 14206774
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||| |||||| ||    
T  14206579 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata---ttttttttttatatgtaagccacgaaaat 14206675  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  14206676 aatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggcatggccactttttgttgagtgtgaggtcatgtgttcaaga 14206774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 79 - 277
Target Start/End: Complemental strand, 4486819 - 4486624
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| | |||||              |||||||||||||||| ||    
T  4486819 gggccggcccatagcccgtcgaggttgggcgacgacaccgggcctccaattttttggggtccaaaat---tttttttttttatatgtaagacacgaaaat 4486723  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    |||||||||||||||||||||||||| || ||| ||||||||| | ||||||||| ||  |||||||||||||||||||||||| ||||||||||||||    
T  4486722 aatggttatatatctattaaaagcaagtttattcaatttgtaccgtttgctttagaggcatggccactttttgttgagtgtgagatcatgtgttcaaga 4486624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 276
Target Start/End: Original strand, 31715348 - 31715537
Alignment:
Q  83 cggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatataatg 182  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             |||||||||||||||| ||||||    
T  31715348 cggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagacacgaaaataatg 31715443  T
Q  183 gttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaag 276  Q
     |||||||||||| ||||||||   | || | |||||||| ||||||  ||||| |||||| ||||||||||||||||||||||||||||||||    
T  31715444 tttatatatctatcaaaagcaatccatttcagtttgtacaacttgctacagtggcgtggcccctttttgttgagtgtgaggtcatgtgttcaag 31715537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 34527122 - 34527062
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| | |||||||| ||||||| ||||||| ||||||| ||||||    
T  34527122 gggccggcccatagcccgtcggggctgggcgacgacactgggcctcaaatttttgggggcc 34527062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 24596242 - 24596461
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnn---------atatgtaaga 169  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| ||                     ||||||||||    
T  24596242 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaaaaaaatatatatatatatatatttatatgtaaga 24596341  T
Q  170 cacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgt 269  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24596342 cacgaaaataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgt 24596441  T
Q  270 gttcaagacccacttattta 289  Q
    ||||||||||||||||||||    
T  24596442 gttcaagacccacttattta 24596461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 10696007 - 10695808
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             |||||||||||||||| ||    
T  10696007 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata---tttttttttaatatgtaagacacgaaaat 10695911  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10695910 aatgattatatatctattaaaagcgaattaatttaatttgt-cagcttgctttagtggcgtggccactttttgttgagtgtgaggtcatgtgttcaagac 10695812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 43171577 - 43171776
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |              ||||||||| |||||| ||    
T  43171577 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaattt----ttatttttttatatgtaagccacgaaaat 43171672  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43171673 aatagttatatatctattaaaaacaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgatgagtgtgaggtcatgtgttcaagac 43171772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 14242968 - 14242764
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnn-atatgtaagacacgaata 177  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  ||              ||||||||| |||||| |    
T  14242968 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaatttattttatttttttttatatgtaagccacgaaaa 14242869  T
Q  178 taatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  14242868 taatggttatatatctattaaaagcaaattaattcaatctgtacagcttgctttagtcgtgtggccactttttgatgagtgtgaggtcatgtgttcaaga 14242769  T
Q  278 cccac 282  Q
    |||||    
T  14242768 cccac 14242764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 53175754 - 53175950
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| ||| |              ||||||||| |||||| ||    
T  53175754 gggccggcccatagctcgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaatt-------tttttttatatgtaagccacgaaaat 53175846  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  53175847 aatggttatatatctattaaaagcaaattagttcaatttgtacagcttactttagtggtgtggccactttttgatgagtgtgaggtcatgtgttcaagac 53175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 39625355 - 39625554
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| ||||||             |||||||||||||||| ||    
T  39625355 gggccggcccatagcccgtcgaggctgggcgacgacaccgggccttcaattttttggggcccaaaata----tttttttttatatgtaagacacgaaaat 39625450  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| ||| |||||||| |||||||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  39625451 aatgattatatatctattaaaagcaaatttattcaatttgtatagcttgctttagtggcatgaccactttttgttgagtgtgaggtcatgtgttcaagac 39625550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 45906057 - 45906256
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||||||             |||||||||||||||| ||    
T  45906057 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggtccaaaata----tttatttttatatgtaagacacgaaaat 45906152  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  45906153 aatgattatatatctattaaaagcaaatttattcaatctgtacagcttgctttagtggtgtgatcattttttgttgagtgtgaggtcatgtgttcaagac 45906252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 52722654 - 52722456
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    |||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||| ||  ||||              ||||||||| |||||| ||    
T  52722654 gggccggcccatagccggtcgaggctgggcgacgacaccgggtctccaattttttgggccc--aaat---ttttttttttaatatgtaagccacgaaaat 52722560  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||    
T  52722559 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggcatgaccactttttgttgagtgtgaagtcatgtgttcaagac 52722460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 10475822 - 10476028
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaata---annnnnnnnnnnnatatgtaagacacgaa 175  Q
    |||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||||||| ||||||   |            ||||||||| ||||||    
T  10475822 gggccgacccatagccggtcgaggctgggcgacgacatcgggcctccaattttttggggcccaaaatatatatatattttttttatatgtaagccacgaa 10475921  T
Q  176 tataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaa 275  Q
     |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  10475922 aataatggttatatatctattaaaagcaaatcaattcaatttgtatagcttgctttagtggcatggccactttttattgagtgtgaggtcatgtgttcaa 10476021  T
Q  276 gacccac 282  Q
    |||||||    
T  10476022 gacccac 10476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 52553327 - 52553524
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| ||| |              ||||||||| |||||| ||    
T  52553327 gggccggcccatagcccgtcgaggctgggcgacgacatcgggtctccaattttttggggcccaaatt-----tttttttttatatgtaagtcacgaaaat 52553421  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  || |||||||||| ||||||||||||||||||||||||||    
T  52553422 aatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagt-gaatgaccactttttgatgagtgtgaggtcatgtgttcaagac 52553520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 8034583 - 8034381
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||  |              ||||||||| |||||| ||    
T  8034583 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctctaattttttggggcccaatttt-tttttattttttatatgtaagccacgaaaat 8034485  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||||    
T  8034484 aatggttatatatctattaaaagcgaattaattcaatctgtacagcttgctttagtggcgtggccgctttttgatgagtgtgaggtcatgtgtttaagac 8034385  T
Q  279 ccac 282  Q
    ||||    
T  8034384 ccac 8034381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 40690582 - 40690701
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||| |||||||    
T  40690582 atatgtaagccacgaaaataatggttatatatctattaaaagcaaattaattcaatttgtacagcttacttttgtggcgtggccactttttgatgagtgt 40690681  T
Q  260 gaggtcatgtgttcaagacc 279  Q
    ||||||||||||||||||||    
T  40690682 gaggtcatgtgttcaagacc 40690701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 4971170 - 4970965
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnn--atatgtaagacacgaat 176  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||  |                ||||||||| ||||||     
T  4971170 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggtcaaatttttttttttttttttttatatgtaagccacgaaa 4971071  T
Q  177 ataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaag 276  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||  |||||||| ||||||||||||||||||||||||    
T  4971070 ataatggttatatatctattaaaagcaaattaattcaatttgtatagcttgctttagtggcatggttactttttgatgagtgtgaggtcatgtgttcaag 4970971  T
Q  277 acccac 282  Q
    ||||||    
T  4970970 acccac 4970965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 38572895 - 38572773
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || | ||||||||| |||||||    
T  38572895 atatgtaagccacgaaaataatggttatatatctattaaaagcaaattaattcaatctgtacagcttgctttagtggcgtagtcactttttgatgagtgt 38572796  T
Q  260 gaggtcatgtgttcaagacccac 282  Q
    |||||||||||||||||||||||    
T  38572795 gaggtcatgtgttcaagacccac 38572773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 50517263 - 50517063
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||| | ||||||             |||||||||| ||||| ||    
T  50517263 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcttccaattttttggggtccaaaata---ttttttttttatatgtaagatacgaaaat 50517167  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||| | ||| ||||| |||| |||||||||||||  ||||   |||||||||||||||||||||||||||||||||    
T  50517166 aatgattatatatctattaaaagcaaagttattcaatttatacaacttgctttagtggcatggctgttttttgttgagtgtgaggtcatgtgttcaagac 50517067  T
Q  279 ccac 282  Q
    ||||    
T  50517066 ccac 50517063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 26406941 - 26407063
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||| || ||||||||||| ||| |||    
T  26406941 atatgtaagccacgaaaataatggttatatatctattaaaagcaacttagttcaatttgtacagcttgctttagtggcgtagccactttttgatgaatgt 26407040  T
Q  260 gaggtcatgtgttcaagacccac 282  Q
     ||||||||||||||||||||||    
T  26407041 aaggtcatgtgttcaagacccac 26407063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 24657129 - 24656930
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||| |||||||||||||||| | ||||| ||||||||| |||||||||||||||||||| ||  |              |||||||||||||||| ||    
T  24657129 gggccagcccatagcccgttgaagttgggcgacgacaccgtgcctccaattttttggggcccaattt----ttttttttttatatgtaagacacgaaaat 24657034  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||| | || ||| | || |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| |||    
T  24657033 aatggttatatatctattaaaagcatactattttgaattttacagcttacttcagtgttgtggccactttttgttgagtgtgaggtcatgtgttcatgac 24656934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 38834654 - 38834461
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||| | |||| |||||||||| ||||||             |||||||||||| ||| ||    
T  38834654 gggccggcccatagcccgtcgaggctgggcgacgacaccgggctttcaatattttggggcccaaaata---tattttttttatatgtaagacatgaaaat 38834558  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||       ||||||||||  || |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  38834557 aatggttatata-------aaagcaaattttttcaatttggacagcttgctttagtggcatggccactttttgttgagtgtgaggtcatgtgttcaagac 38834465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 54245095 - 54244984
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||| ||| ||| |||| ||||||||||||||| |||| || ||||||||||||||    
T  54245095 atatgtaagacacgaaaataatgattatatatctattaaaagcgaatttattcaatctgtatagcttgctttagtggcgtggtcattttttgttgagtgt 54244996  T
Q  260 gaggtcatgtgt 271  Q
    ||||||||||||    
T  54244995 gaggtcatgtgt 54244984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 38572984 - 38572924
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  38572984 gggccggcccatagcccgtcgaggctgggcgacgacaccaggcctccaattttttggggcc 38572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 40690497 - 40690557
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  40690497 gggccggcccatagcccgtcgaggctgggcgacgacaccggacctccaattttttggggcc 40690557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 17332143 - 17332083
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| | |||||||| || |||| ||||||| ||||||| ||||||    
T  17332143 gggccggcccatagcccgtcggggctgggcgaccacactgggcctcaaatttttgggggcc 17332083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 24656869 - 24656833
Alignment:
Q  178 taatggttatatatctattaaaagcaaattaatttaa 214  Q
    |||||||||||||||||||||||||||| || |||||    
T  24656869 taatggttatatatctattaaaagcaaactattttaa 24656833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 277
Target Start/End: Original strand, 46940019 - 46940213
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||| |||||| ||    
T  46940019 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagccacgaaaat 46940114  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46940115 aatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggcgtggccactttttgttgagtgtgaggtcatgtgttcaaga 46940213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 79 - 278
Target Start/End: Complemental strand, 6587791 - 6587596
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||| |||||| ||    
T  6587791 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagccacgaaaat 6587696  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6587695 aatggttatatatctattaaaagcaaattaattcaatttgtatagcttgctttagtggcgtggccactttttgttgagtgtgaggtcatgtgttcaagac 6587596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 38150390 - 38150589
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             |||||||||||||||| ||    
T  38150390 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata---tttttttttaatatgtaagacacgaaaat 38150486  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38150487 aatgattatatatctattaaaagcgaattaatttaatttgt-cagcttgctttagtggcgtggccactttttgttgagtgtgaggtcatgtgttcaagac 38150585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 16189187 - 16188985
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||             ||||||||| |||||| ||    
T  16189187 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaa-tattttattttttttatatgtaagccacgaaaat 16189089  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  16189088 aatggttatatatctattaaaagcaaattaattaaatttgtacagcttgctttagtggcgtggcaactttttgatgagtgtgaggtcatgtgttcaagac 16188989  T
Q  279 ccac 282  Q
    ||||    
T  16188988 ccac 16188985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 1783559 - 1783758
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||| |              ||||||||| |||||| ||    
T  1783559 gggctggcccatagcccgtcgaggctgggcgacgacaccgggcctccaactttttggggcccaaatt----ttttttttttatatgtaagccacgaaaat 1783654  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  1783655 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggcgtggccactttttgatgagtgtgaggtcatgtgttcaagac 1783754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 36333205 - 36333000
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnn--atatgtaagacacgaat 176  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||| ||  |                ||||||||| ||||||     
T  36333205 gggccggcccatagcccgtcgagactgggcgacgacaccgggcctccaattttttggggcccaatttttttttttttttttttatatgtaagccacgaaa 36333106  T
Q  177 ataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaag 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36333105 ataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgatgagtgtgaggtcatgtgttcaag 36333006  T
Q  277 acccac 282  Q
    ||||||    
T  36333005 acccac 36333000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 29665970 - 29666168
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||| |              ||||||||| |||||| ||    
T  29665970 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaactttttggggcccaaatt-----tttttttttatatgtaagccacgaaaat 29666064  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  29666065 aatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggcgtggccattttttgatgagtgtgaggtcatgtgttcaagac 29666164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 19893691 - 19893490
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||||| |||||||            |||||||||||| ||| ||    
T  19893691 gggccggcccatagcccgtcgaggatgggcgacaacaccgggcctccaattttttggggcccaaaataatttttttttt--atatgtaagacatgaaaat 19893594  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| ||||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  19893593 aatgattatatatctattaaaagcaaatttttttaatttgtacaacttgctttagtggcgtgaccactttttgttgagtgtgaggtcatgtgttcaagac 19893494  T
Q  279 ccac 282  Q
    ||||    
T  19893493 ccac 19893490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 32801834 - 32801636
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||| ||||| |||||||||| ||||||| ||| ||||||||||||||| || ||||||             |||||||||||| ||| ||    
T  32801834 gggccggcccataacccgtcgaggctgggcgacgacactgggtctccaattttttgggacccaaaata-----ttttttttatatgtaagacatgaaaat 32801740  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32801739 aatggttatatatctattaaaagcaaattttttcaatttgtacagcttgctttagtggcgtggccactttttgttgagtgtgaggtcatgtgttcaagac 32801640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 3176191 - 3175995
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||             |||||||||||||||| ||    
T  3176191 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttatggggcctaaaata-----ttttttttatatgtaagacacgaaaat 3176097  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| ||||||||||||||||||| |||| ||| ||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||  |||||||||||    
T  3176096 aatgattatatatctattaaaagcgaatttattcaatctgtacagcttgctttagtggcgtgaccattttttgttgagtgtgaggtc--gtgttcaagac 3175999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 27895084 - 27895282
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||  |              ||||||||| |||||| ||    
T  27895084 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggctcaattt-----tttttttttatatgtaagccacgaaaat 27895178  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  27895179 aatggttatatatctattaaaagcgaactaatttaatatgtatagcttgctttagtggtgtggccactttttgatgagtgtaaggtcatgtgttcaagac 27895278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 47749117 - 47748918
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| |||| ||||||             |||||||||||||||| ||    
T  47749117 gggccggcccatagcccgtcgaggctgggcgatgacaccgggcctccaattttttgcggcccaaaata----tttttttttatatgtaagacacgaaaat 47749022  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| | | ||||||| |||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||     
T  47749021 aatgattatatatctattaaaagcaaatttaatcaatttgtgcagcttgccttagtggcgtggctattttttgttgagtgtgaggtcatgtgttcaagat 47748922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 7835200 - 7835080
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||  ||    
T  7835200 atatgtaagccacgaaaataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgttttagtggcgtggccgctttttgatga--gt 7835103  T
Q  260 gaggtcatgtgttcaagacccac 282  Q
    |||||||||||||||||||||||    
T  7835102 gaggtcatgtgttcaagacccac 7835080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 38098552 - 38098353
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||  |||||| |||||| |||||||||||||||| ||||||              ||||||||||||||| |     
T  38098552 gggccggcccatagcccgtcgaggctgggagacgacatcgggccaccaattttttggggcccaaaatattttattttt----tatgtaagacacgaaaag 38098457  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||  | || ||||||||||||||||||||||||||||||||    
T  38098456 aatggttatatatctattaaaagcaaattattttaatttgtatatcttgcttcagtggcgttcctacattttgttgagtgtgaggtcatgtgttcaagac 38098357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 28147055 - 28147254
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||| ||||||||| ||||||| || |||||| ||||||||||||||||||||||| ||||||             ||||||||||||||||  |    
T  28147055 gggccggcctatagcccgtcgaggctgagcgacgacatcgggcctccaattttttggggcccaaaata----ttttttttaatatgtaagacacgaaagt 28147150  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||| ||||||||||||||  |||||||||  |||||||||||||||||  |||  | |||||||||||||||||||||||||||||||||    
T  28147151 aatgattatatatatattaaaagcaaatctatttaatttacacagcttgctttagtggcatggtaattttttgttgagtgtgaggtcatgtgttcaagac 28147250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 264
Target Start/End: Complemental strand, 29172427 - 29172246
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    |||||||||||||||| || || ||||||| | ||||||||||||||||||||||||   ||||||||             |||||||||||||||| ||    
T  29172427 gggccggcccatagcc-gtcgaagctgggcgatgacaccgggcctccaattttttggaatctaaaata---tatattttttatatgtaagacacgaaaat 29172332  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggt 264  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  29172331 aatgattatatatctattaaaagcaaattattttaatttgtacaacttgctttagtggcgtggccattttttgttgagtgtgaggt 29172246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 278
Target Start/End: Complemental strand, 23980111 - 23979916
Alignment:
Q  82 ccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatataat 181  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||| | ||||||             |||||||||||||||| |||||    
T  23980111 ccggcccatagcccgtcgaggctgggcgacgataccgggcctccaattttttggggtccaaaata----tatttttttatatgtaagacacgaaaataat 23980016  T
Q  182 ggttatatatctattaaaagcaaattaatt---taatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||| |||||||||||||||| ||   || | | |||| |||| ||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  23980015 ggttatatatttattaaaagcaaattattttagtagtctatacaccttgttttagtggcatggccactttttgttgagtgtgagatcatgtgttcaagac 23979916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 7118257 - 7118146
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| || |||||||||| |||||||||||||  ||| |||||||| ||||||||    
T  7118257 atatgtaagacacgaaaataatagttatatatctattaaaagcaaattatttcaatttgtacaacttgctttagtggcatggtcactttttattgagtgt 7118158  T
Q  260 gaggtcatgtgt 271  Q
     |||||||||||    
T  7118157 caggtcatgtgt 7118146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 44073833 - 44073956
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccac-tttttgttgagtg 258  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| ||| || |||||| ||| ||||||| |||||  ||| ||| |||||||||||||    
T  44073833 atatgtaagacacgaaaataatagttatatatctattaaaagcaatttatttcaatttggacaccttgcttgagtggcatggtcacttttttgttgagtg 44073932  T
Q  259 tgaggtcatgtgttcaagacccac 282  Q
    ||||||||||||||||||||||||    
T  44073933 tgaggtcatgtgttcaagacccac 44073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 7835299 - 7835239
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    |||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||||    
T  7835299 gggccggcccatagcccgtcaaggctgggcgacgacaccggacctccaattttttggggcc 7835239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 47262867 - 47262807
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| | |||||||| ||||||| ||||||| ||||||| ||||||    
T  47262867 gggccggcccatagcccgtcggggctgggcgacgacactgggcctcaaatttttgggggcc 47262807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 7118335 - 7118278
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggg 136  Q
    ||||||||| ||||||| | |||| ||||| |||||||||| ||| ||||||||||||    
T  7118335 gggccggcctatagcccatcgaggttgggcgacgacaccggaccttcaattttttggg 7118278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 35407178 - 35407125
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttt 132  Q
    |||||| |||||||||||| | |||||||| ||||||| ||||||| |||||||    
T  35407178 gggccgacccatagcccgtcggggctgggcgacgacactgggcctcaaattttt 35407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 38075864 - 38075804
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||| |||||||||||| | | |||||||| || | || |||||||||    
T  38075864 gggccggcccatagcccattgaggctgggctatgccaccgggcttcgatttatttggggcc 38075804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 45463751 - 45463549
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||            |||||||||||||||| ||    
T  45463751 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaataatttttttttta-atatgtaagacacgaaaat 45463653  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  45463652 aatgattatatatctattaaaagcaaatttatttaatttgtacagcttgctttagtggcatggccattttttgttgagtgtgaggtcatgtgttcaagac 45463553  T
Q  279 ccac 282  Q
    ||||    
T  45463552 ccac 45463549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 4391667 - 4391867
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||             ||||||||||||| || ||    
T  4391667 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcctaaaata---ttttttttttatatgtaagacacaaaaat 4391763  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  4391764 aatgattatatatctattaaaagcaaatttattcaatttgtacagcttgctttagtggtgtgaccattttttgttgagtgtgaggtcatgtgttcaagac 4391863  T
Q  279 ccac 282  Q
    ||||    
T  4391864 ccac 4391867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 5003656 - 5003456
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||             |||||||||||| ||| ||    
T  5003656 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcctaaaata---ttttttttttatatgtaagacatgaaaat 5003560  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  5003559 aatggttatatatctattaaaagcaaattttttgaatttgtacagcttgctttagtggcgtcgccattttttgttgagtgtgaggtcatgtgttcaagac 5003460  T
Q  279 ccac 282  Q
    ||||    
T  5003459 ccac 5003456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 34599771 - 34599573
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |              ||||||||| |||||| ||    
T  34599771 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaattt-----ttttttattatatgtaagccacgaaaat 34599677  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34599676 aatggttatatatctattaaaagcaaattaattcaatttgtacagcttgttttagtggtgtggccactttttgttgagtgtgaggttatgtgttcaagac 34599577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 80 - 282
Target Start/End: Original strand, 16492421 - 16492619
Alignment:
Q  80 ggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatata 179  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             |||||||||||||||| |||    
T  16492421 ggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagacacgaaaata 16492516  T
Q  180 atggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagacc 279  Q
    ||| |||||||||||||||||||||||| ||| ||| | |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  16492517 atgattatatatctattaaaagcaaatttattcaatctatacagcttgcttcagtggcatggccactttttgttgagtgtgaggtcatgtgttcaagacc 16492616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 25459675 - 25459479
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||| ||| |              ||||||||| |||||| ||    
T  25459675 gggccggcccatagcccgtcgaggctgggcgacgacatcgggcctccaattttttggggcccaaatt-------tttttttatatgtaagccacgaaaat 25459583  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  25459582 aatggttatatatctattaaaagcaaattaattcaatctgtatagcttgctttagtggtgtgaccactttttgatgagtgtgaggtcatgtgttcaagac 25459483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 28439983 - 28439785
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    |||||||||||||| |||| |||| ||||| |||||||||| ||||||||||||||||||||||||||             |||||||||  ||||| ||    
T  28439983 gggccggcccatagtccgtcgaggttgggcgacgacaccggacctccaattttttggggcctaaaata-----ttttttttatatgtaagctacgaaaat 28439889  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||     
T  28439888 aatggttatatatctattaaaagcaaattaattttatttgtacagcttgctttagtagcgcggccactttttgttgagtgtgaggtcatgtgttcaagat 28439789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 12131577 - 12131377
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||             ||||| |||||||||| ||    
T  12131577 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattatttggggcctaaaata----tttttttttatatgcaagacacgaaaat 12131482  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccact-ttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||  |||||||| ||||||| |||||||||||||||||||||||    
T  12131481 aatggttatatatctattaaaagcaaattattttgatttgtacaccttgcttgagtggcatggccacttttttgttaagtgtgaggtcatgtgttcaaga 12131382  T
Q  278 cccac 282  Q
    |||||    
T  12131381 cccac 12131377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 15382009 - 15381814
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |              ||||||||| |||||| ||    
T  15382009 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaattt--------ttttttatatgtaagccacgaaaat 15381918  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||    
T  15381917 aatggttatatatttattaaaagcgaattaatttaatctgtacagcttgctttagtggcatggctactttttgatgagtgtgaggtcatgtgttcaagac 15381818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 81 - 282
Target Start/End: Original strand, 38903352 - 38903551
Alignment:
Q  81 gccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatataa 180  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||||||| ||||||             |||||||||||| ||  |||     
T  38903352 gccggcccatagcccgtcgaggctgggcgacgacaccggacctccaattatttggggcccaaaata---ttttttttttatatgtaagacatgacaatag 38903448  T
Q  181 tggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccac-tttttgttgagtgtgaggtcatgtgttcaagacc 279  Q
    |||||||||||||||||||||||| ||| |||  ||| |||| ||||||| |||||| | ||||| ||||||||||||||||||||| ||||||||||||    
T  38903449 tggttatatatctattaaaagcaagttatttttgtttatacaccttgcttgagtggtattgccacttttttgttgagtgtgaggtcaagtgttcaagacc 38903548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 38033697 - 38033634
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaa 142  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  38033697 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcctaa 38033634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 34132448 - 34132343
Alignment:
Q  180 atggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgt--tcaaga 277  Q
    ||||||||||||||||||||||  ||||| || ||| | |||||||||||| ||| | | |||   ||||||||||||||||||||||| ||  ||||||    
T  34132448 atggttatatatctattaaaagtgaattatttcaatctttacagcttgcttcagttgcgaggcttgtttttgttgagtgtgaggtcatgcgttctcaaga 34132349  T
Q  278 cccact 283  Q
    ||||||    
T  34132348 cccact 34132343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 38033621 - 38033576
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaa 205  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||    
T  38033621 atatgtaagccacgaaaataatagttatatatctattaaaagcaaa 38033576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 9e-64; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 46580291 - 46580490
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||             ||||||||||||| || ||    
T  46580291 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcctaaaata----tttttttttatatgtaagacacaaaaat 46580386  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  46580387 aatgattatatatctattaaaagcaaatttattcaatttgtacagcttgctttagtggtgtgaccattttttgttgagtgtgaggtcatgtgttcaagac 46580486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 43100603 - 43100399
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnn-atatgtaagacacgaata 177  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| ||| | |             |||||||||||||||| |    
T  43100603 gggccggcccatagcctgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaatttatttatttatttttatatgtaagacacgaaaa 43100504  T
Q  178 taatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||    
T  43100503 taatggttatatatctattaaaagcaaattatttcaatttgtacagcttgctttagtggcatggtcactttttgttgagtgtgaagtcatgtgttcaaga 43100404  T
Q  278 cccac 282  Q
    |||||    
T  43100403 cccac 43100399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 53228176 - 53227976
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    |||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||||||| ||||||             |||||||||||||||| ||    
T  53228176 gggccggcccatagtccgtcgaggctgggcgacgacaccggacctccaattttttggggcccaaaata---ttttttttttatatgtaagacacgaaaat 53228080  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  53228079 aatgattatatatctattaaaagcgaatttattcaatttgtacagcttgctttagtggcgtgaccattttttgttgagtgtgaggtcatgtgttcaagac 53227980  T
Q  279 ccac 282  Q
    ||||    
T  53227979 ccac 53227976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 79 - 280
Target Start/End: Complemental strand, 13229831 - 13229633
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||| ||| ||| |||||||||||||||||||||||| | ||| |              ||||||||| |||||| ||    
T  13229831 gggccggcccatagcccgtcgaggctaggcgacggcaccgggcctccaattttttggggtccaaatt---tttttttttttatatgtaagtcacgaaaat 13229735  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  13229734 aatggttatatatctattaaaagcaaattaattaaatttgtacagcttgctttagtggcatggccattttttgttgagtgtgaggtcatgtgttcaagac 13229635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 79 - 277
Target Start/End: Complemental strand, 1121520 - 1121327
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| ||| |              ||||||||| |||||| ||    
T  1121520 gggccggcccatagcccgtcgaggatgggcgacgacaccgggcctccaattttttggggcccaaatt----ttttttttttatatgtaagccacgaaaat 1121425  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
     |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  1121424 gatggttatatatctattaaaagcaaattaattcaatctgtacagcttgctttagtggtgtggtca-tttttgttgagtatgaggtcatgtgttcaaga 1121327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 83 - 282
Target Start/End: Original strand, 6890972 - 6891171
Alignment:
Q  83 cggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatataatg 182  Q
    |||||||||| |||| |||| ||||| |||||||||| ||||||||||||||||||| ||| |              ||||||||| |||||| ||||||    
T  6890972 cggcccatagtccgtcgaggttgggcgacgacaccggacctccaattttttggggcccaaatttttattttttttttatatgtaagccacgaaaataatg 6891071  T
Q  183 gttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagacccac 282  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  6891072 gttatatatcaattaaaagaaaattaatttaatttgtacagtttgctttagtggcgtggccattttttgatgagtgtgaggtcatgtgttcaagacccac 6891171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 28714301 - 28714501
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| | ||||||             |||||||||| || || ||    
T  28714301 gggccggcccatagcccgtcgaggttgggcgacgacaccgggcctccaattttttggggtccaaaata---ttttttttttatatgtaagatacaaaaat 28714397  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| ||||||||||||||||| | |||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||     
T  28714398 aatgattatatatctattaaaaacgaatttattcaatttgtacagcttgctttagtggcgtggccactatttgttgagtgtgaggtcatgtgttcaagat 28714497  T
Q  279 ccac 282  Q
    ||||    
T  28714498 ccac 28714501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 40219217 - 40219016
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||||||             |||||||||| ||||| ||    
T  40219217 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggtccaaaata--ttttttttttaatatgtaagatacgaaaat 40219120  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||  |||||| |||||||||| |||| |||||||||||| ||||    
T  40219119 aatgattatatatctattaaaagtaaatttatttaatctgtacagcttgctttagtggcatggccaatttttgttgaatgtgtggtcatgtgttctagac 40219020  T
Q  279 ccac 282  Q
    ||||    
T  40219019 ccac 40219016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 576007 - 575885
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  576007 atatgtaagccacgaaaataatggttatataactattaaaagcgaattaattcaatttgtatagcttgctttagtggtgtggccactttttgttgagtgt 575908  T
Q  260 gaggtcatgtgttcaagacccac 282  Q
    |||||||||||||||||| ||||    
T  575907 gaggtcatgtgttcaagatccac 575885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 1124281 - 1124163
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  1124281 atatgtaagccacgaaaataatggttatatatctattaaaagaaaattaattcaatttgtacagcttgctttagtggtgtggccattttttgttgagtgt 1124182  T
Q  260 gaggtcatgtgttcaagac 278  Q
    |||| ||||||||||||||    
T  1124181 gaggccatgtgttcaagac 1124163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 21629417 - 21629616
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| || ||||||             |||||||||||||||| ||    
T  21629417 gggccggcccatagcccgtcgaggttgggcgacgacaccgggcctccaattttttgggccc-aaaata---tattttttttatatgtaagacacgaaaat 21629512  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||| |||||||||||||||||||||| ||| || |||||||||| |||||||||||||  ||| ||||||||||||||||||| |||||||||||||||     
T  21629513 aattgttatatatctattaaaagcaatttatttcaatttgtacaacttgctttagtggcatggtcactttttgttgagtgtgaagtcatgtgttcaagat 21629612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 26619165 - 26619365
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             |||||||||||||||| ||    
T  26619165 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata---tattttttttatatgtaagacacgaaaat 26619261  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||| |||| || || |||||||||| |||||||||||||  ||   | ||| | |||||||||||||||||||||||||||    
T  26619262 aatggttatatatctattaaaatcaaaatatttcaatttgtacaacttgctttagtggcatgtttattttctattgagtgtgaggtcatgtgttcaagac 26619361  T
Q  279 ccac 282  Q
    ||||    
T  26619362 ccac 26619365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 50435899 - 50436021
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||| ||||||||| |||||||    
T  50435899 atatgtaagccacgaaaataatggttatatatctattaaaagtaaattaatttaatctgtacagcttgctttagtggcatggtcactttttgatgagtgt 50435998  T
Q  260 gaggtcatgtgttcaagacccac 282  Q
    |||||||||||||||||||||||    
T  50435999 gaggtcatgtgttcaagacccac 50436021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 48833014 - 48832892
Alignment:
Q  160 atatgtaagacacgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgt 259  Q
    ||||||||| |||||| |||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||| |||||||||||||| |||||||    
T  48833014 atatgtaagccacgaaaataatggttatatatctattaaaagcgaattaattcaatctgtacagtttgctttagtggcgtggccactttttgatgagtgt 48832915  T
Q  260 gaggtcatgtgttcaagacccac 282  Q
    || ||||||||||||||||||||    
T  48832914 gatgtcatgtgttcaagacccac 48832892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 251
Target Start/End: Original strand, 32129155 - 32129324
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||             |||||||| ||| | | ||    
T  32129155 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggtctaaaata---tattttttttatatgtaaaacatgtaaat 32129251  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttg 251  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||  |||||||| ||||||||||||||    
T  32129252 aatggttatatatctattaaaagcaaattttttcaatttgtacagcttattttagtggcgtggccactttttg 32129324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 77 - 282
Target Start/End: Original strand, 56038079 - 56038280
Alignment:
Q  77 ctgggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaat 176  Q
    ||||||||||||||||||||| |||||||| | |||||||||| |||||||||||||||||   ||| |              |||||||||| |||||     
T  56038079 ctgggccggcccatagcccgtcgaggctggacgacgacaccggacctccaattttttggggttcaaatt----tttttttttaatatgtaagatacgaaa 56038174  T
Q  177 ataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaag 276  Q
    |||||| |||||||||||||||||| || || ||| ||| |||| ||||||||||||||  ||||||| |||||||||||||||||||||||||||| |     
T  56038175 ataatgattatatatctattaaaagtaagtttattcaatctgtatagcttgctttagtgacgtggccattttttgttgagtgtgaggtcatgtgttctaa 56038274  T
Q  277 acccac 282  Q
    ||||||    
T  56038275 acccac 56038280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 48833100 - 48833042
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttgggg 137  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  48833100 gggccggcccataggccgtcgaggctgggcgacgacaccgggcctccaattttttgggg 48833042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 50435833 - 50435887
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaatttttt 133  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  50435833 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaatttttt 50435887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 576080 - 576023
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggg 136  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  576080 gggccagcccatagcccgtcgaggctgggcgacgacaccgggcctccagttttttggg 576023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 4e-63; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 79 - 277
Target Start/End: Complemental strand, 25764404 - 25764210
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||| |||||| ||    
T  25764404 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagccacgaaaat 25764309  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaaga 277  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  25764308 aatggttatatatctattaaaagcaaattaattcaatttgtacagcttgctttagtggcatggccactttttgttgagtgtgaggtcatgtgttcaaga 25764210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 3466328 - 3466530
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             |||||||||||| ||| ||    
T  3466328 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata-tatatttttttaatatgtaagacatgaaaat 3466426  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  3466427 aatgattatatatctattaaaagcaaatttatttaatttgtacagcttgctttagtggcatggccattttttgttgagtgtgaggtcatgtgttcaagac 3466526  T
Q  279 ccac 282  Q
    ||||    
T  3466527 ccac 3466530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 19858316 - 19858117
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||  |||||             ||||||||| |||||| ||    
T  19858316 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctctaattttttggggcccgaaata----tttttttttatatgtaagccacgaaaat 19858221  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19858220 aatggttatatatctattaaaagcaaattaattaaatttgtacagcttgctttagtggtgtgacaactttttgttgagtgtgaggtcatgtgttcaagac 19858121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 21145921 - 21145723
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |              ||||||||| |||||| ||    
T  21145921 gggccggcccatagcccgttgaggctgggcgacgacaccgggcctccaattttttggggcccaaatt-----tttttttttatatgtaagccacgaaaat 21145827  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||| |||||||| ||| |||| |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  21145826 aatggttatatatctattaaaagcgaattaattcaatctgtatagcttgctttagtgatgtggccattttttgatgagtgtgaggtcatgtgttcaagac 21145727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 282
Target Start/End: Original strand, 794517 - 794711
Alignment:
Q  83 cggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatataatg 182  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||            |||||||||||||||| ||||||    
T  794517 cggcctatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaataattttttt-----atatgtaagacacgaaaataatg 794611  T
Q  183 gttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagacccac 282  Q
     |||||||||||||||||| ||||  ||| |||||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  794612 attatatatctattaaaagaaaatatattaaatttgtaaagcttgctttagtagcgtggccattttttgttgagtgtgaggtcatgtgttcaagacccac 794711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 79 - 281
Target Start/End: Complemental strand, 22527642 - 22527444
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||||||| || ||    
T  22527642 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata----tttttttttatatgtaagacacaaaaat 22527547  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||| ||||||||||| | |||||||||||||||||||||||||||   || ||| |||||||||||||||||||||||||||||||||    
T  22527546 aatgattatatatcttttaaaagcaaaattatttaatttgtacagcttgctttagtgacatgaccattttttgttgagtgtgaggtcatgtgttcaagac 22527447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 79 - 281
Target Start/End: Complemental strand, 3514512 - 3514314
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||||| ||| |              ||||||||| ||| || ||    
T  3514512 gggccggcccatagcccatcgaggatgggcgacgacaccgggcctccaattttttggggcccaaatt----ttttttttttatatgtaagccacaaaaat 3514417  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  3514416 gatggttatatatctattaaaagcaaattaatttaatttgtatagcttgctttagtggtgtggtcattttttgttgagtatgaggtcatgtgttcaagac 3514317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 9717281 - 9717341
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| | |||||||| ||||||| ||||||| ||||||| ||||||    
T  9717281 gggccggcccatagcccgtcggggctgggcgacgacactgggcctcaaatttttgggggcc 9717341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 15927351 - 15927411
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| | |||||||| ||||||| ||||||| ||||||| ||||||    
T  15927351 gggccggcccatagcccgtcggggctgggcgacgacactgggcctcaaatttttgggggcc 15927411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 41284540 - 41284480
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| | |||||||| | |||| |||||||| ||||||| ||||||    
T  41284540 gggccggcccatagcccgtcggggctgggcgatgacatcgggcctcaaatttttgggggcc 41284480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 4e-63; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 72 - 282
Target Start/End: Original strand, 13832669 - 13832876
Alignment:
Q  72 ttagtctgggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagaca 171  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||||||    
T  13832669 ttagtcagggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata---ttttttttttatatgtaagaca 13832765  T
Q  172 cgaatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgt 271  Q
    | || |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  13832766 caaaaataatgattatatatctattaaaagcaaatttattcaatttgtacagcttgctttagtggtgtgaccattttttgttgagtgtgaggtcatgtgt 13832865  T
Q  272 tcaagacccac 282  Q
    |||||||||||    
T  13832866 tcaagacccac 13832876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 37350709 - 37350509
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             ||||||||||||| || ||    
T  37350709 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata---ttttttttttatatgtaagacacaaaaat 37350613  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  37350612 aatgattatatatctattaaaagcaaatttattcaatttgtacagcttgctttagtggtgtgaccattttttgttgagtgtgaggtcatgtgttcaagac 37350513  T
Q  279 ccac 282  Q
    ||||    
T  37350512 ccac 37350509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 74 - 274
Target Start/End: Complemental strand, 7351510 - 7351310
Alignment:
Q  74 agtctgggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacg 173  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||||             ||||||||||||||    
T  7351510 agtcagggccggcccatagcccgtcgaggctgggcgacgacaccggacctccaattttttggggcccaaaatatatatattttttaatatgtaagacacg 7351411  T
Q  174 aatataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttc 273  Q
    || |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  7351410 aaaataatgattatatatctattaaaagcaaatttatttaatctgtacagcttgctttagtggcatggccattttttgttgagtgtgaggtcatgtgttc 7351311  T
Q  274 a 274  Q
    |    
T  7351310 a 7351310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 42434736 - 42434537
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |              ||||||||| |||||| ||    
T  42434736 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaattt----ttttttttttatatgtaagccacgaaaat 42434641  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||| |||||||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42434640 aatggttatatatctattaaaaacaaattaattcaatttgtatagattgctttagtggtgtggccactttttgatgagtgtgaggtcatgtgttcaagac 42434541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 9411951 - 9412151
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||             |||||||||| ||||| ||    
T  9411951 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaaaata---ttatttttttatatgtaagatacgaaaat 9412047  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||   |  |||||||| |||||||||||||||||||||||||||    
T  9412048 aatggttatatatctattaaaagcaaattatttcaatttgtacagcttgctttagtggcaagatcactttttattgagtgtgaggtcatgtgttcaagac 9412147  T
Q  279 ccac 282  Q
    ||||    
T  9412148 ccac 9412151  T

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Target: chr1; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 91 - 282
Target Start/End: Original strand, 40535510 - 40535697
Alignment:
Q  91 agcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatataatggttatata 190  Q
    ||||||| |||||||||| ||||||||||||||| ||||||||||||||  |||||             ||||||||| |||||| ||||||||||||||    
T  40535510 agcccgtcgaggctgggcgacgacaccgggcctctaattttttggggcccgaaata----tttttttttatatgtaagccacgaaaataatggttatata 40535605  T
Q  191 tctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagacccac 282  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  40535606 tctattaaaagcaaattaattaaatttgtacagcttgctttagtggtgtgacaactttttgttgagtgtgaggtcatgtgttcaagacccac 40535697  T

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Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 29824192 - 29824397
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnn--atatgtaagacacgaat 176  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| ||  |                ||||||||| ||||||     
T  29824192 gggccggcccatagctcgtcgaggctgggcgacgacaccgggcctccaattttttggggcccaatttttttttttttttttttatatgtaagccacgaaa 29824291  T
Q  177 ataatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaag 276  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29824292 ataatggttatatatctattaaaagcgaattaattcaatttgtacagcttgctttagtggtgtggccactttttgatgagtgtgaggtcatgtgttcaag 29824391  T
Q  277 acccac 282  Q
    ||||||    
T  29824392 acccac 29824397  T

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Target: chr1; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 79 - 278
Target Start/End: Original strand, 31924483 - 31924677
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||| |||||||||||  | |||||              ||||||||| |||||| ||    
T  31924483 gggccggcccatagcccgtcgaggctgggcgacgacaccggacctctaattttttgggatccaaaat-----tttttttttatatgtaagccacgaaaat 31924577  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31924578 aatggttatatatctattaaaagcaaatcaattcaatttgtacagcttgctttagtggcgtggccactttttgttgagtgtgaggtcatgtgttcaagac 31924677  T

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Target: chr1; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 40977210 - 40977012
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||| ||| |              ||||||||| |||||| ||    
T  40977210 gggccggcccatagcccgtcgaggttgggcgacgacaccggacctccaattttttggggcccaaatt-----tttttttttatatgtaagccacgaaaat 40977116  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    ||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  40977115 aatagttatatatctattaaaagaaaattaatttaatttgtatagcttgctttagtggtgtggccactttttgaggagtgtgaggtcatatgttcaagac 40977016  T

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Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 40535445 - 40535505
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  40535445 gggccggcccatagcccgtcgaggctgggcgacgacaccgggcctctaattttttggggcc 40535505  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 27286058 - 27286125
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaata 146  Q
    |||||| ||||||| || | |||||||||| | ||||||||||||| |||||||| ||||||||||||    
T  27286058 gggccgacccatagtccttcgaggctgggctatgacaccgggcctcaaattttttagggcctaaaata 27286125  T

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Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 1804298 - 1804238
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcc 139  Q
    ||||||||||||||||||||| | || ||| ||||||| ||||||| ||||||| ||||||    
T  1804298 gggccggcccatagcccgttgggactaggcgacgacactgggcctcaaatttttgggggcc 1804238  T

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Target: scaffold0054 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 79 - 281
Target Start/End: Original strand, 30373 - 30572
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||||| | |||||||            |||||||||||| ||| ||    
T  30373 gggccggcccatagcccgtcgaggctggacgacgacaccggacctccaattttttggggtccaaaataatttcttttt---atatgtaagacatgaaaat 30469  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaagac 278  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||| |||||||  ||||||||||||||||||||||||    
T  30470 aatgattatatatctattaaaaacaaatttatttaatttgtacagcttgctttagtggcatggccattttttgtgaagtgtgaggtcatgtgttcaagac 30569  T

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Target: scaffold0208 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 79 - 275
Target Start/End: Complemental strand, 3119 - 2925
Alignment:
Q  79 gggccggcccatagcccgttgaggctgggcaacgacaccgggcctccaattttttggggcctaaaataannnnnnnnnnnnatatgtaagacacgaatat 178  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||| || ||||||||||| ||||||             |||||||||||||||| ||    
T  3119 gggccggtccatagcccgtcgaggctgggcgacgacaccgggcctctaaatttttggggcccaaaata--tttttttttttatatgtaagacacgaaaat 3022  T
Q  179 aatggttatatatctattaaaagcaaattaatttaatttgtacagcttgctttagtggtgtggccactttttgttgagtgtgaggtcatgtgttcaa 275  Q
    |||| ||||||||||||||||||||||||||||  || | | ||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  3021 aatgattatatatctattaaaagcaaattaattctatctatgcagtttgttttagtggcgtggccactttttgttgagtgtgaggtcatgtgttcaa 2925  T

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