View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17597_low_1 (Length: 793)
Name: NF17597_low_1
Description: NF17597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17597_low_1 |
 | |
|
| [»] scaffold0257 (3 HSPs) |
| | |
|
| [»] scaffold0043 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 650; Significance: 0; HSPs: 43)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 650; E-Value: 0
Query Start/End: Original strand, 14 - 783
Target Start/End: Complemental strand, 28147696 - 28146927
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
113 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28147696 |
atttcaacttgttgcactttattacaacaattctttttagatttgggaagcatgtctttgttgtattctccaaatcatcttcaataatatgcttcaactc |
28147597 |
T |
|
| Q |
114 |
attgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacattgcttgatttttatt |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
28147596 |
attgcactcttcaattctcatataatacaactgtggtagacaccttattacagaagtggtgaaaacaattttcaacttttcacatcccttgatttttatt |
28147497 |
T |
|
| Q |
214 |
cttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaaaacatccaaatcaatgtatttcaaagctaagttca |
313 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
28147496 |
cttgtaaggttttggagggagaacgaattgttgggacccacaaaaaggcatgtcatcataggcagaacatccaaatcaatgtcttccaaagctaagttca |
28147397 |
T |
|
| Q |
314 |
tttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactttcagtctttccaaagagagaaaatgatccacattccc |
413 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| | ||||| ||||||| |||||||| |||||||||||| |
|
|
| T |
28147396 |
tttgctgttcatttatttcattcagacaaaagatactttctactttggagttattcgttaccatgagtctctccaaagcgagaaaattatccacattccc |
28147297 |
T |
|
| Q |
414 |
actcaattcctgtaataactgaatgggaaataaacacaatgcataaaataagaataacaaagtcatataagtacaatagagatgataaaaggctctggaa |
513 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28147296 |
actcaattcctgtaataaatgaatgggaaataaacacaatgcataaaataagaataacaaagtcatataagtacaatagagatgataaaaggctctggaa |
28147197 |
T |
|
| Q |
514 |
taaattattacaatataatgtaacaaaaagaaagcactacagtatttaattaaattaatattgttatttaattttcaacactccaacctttttgtttttc |
613 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28147196 |
taaattattacaatataatgtaacaaaaagaaagcactacagtatttaattaaattaatattgttatttaattttcaacactccaacctttttgtttttc |
28147097 |
T |
|
| Q |
614 |
aatctgctacccttcctccattgaatcaacgcccacattcacattttcatataagttggagacaaggacgaagggcttcataacaatgggtatcattggc |
713 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28147096 |
aatctgctacccttcctccattgaatcaacccccacattcacattttcatataagttgtagacaaggacgaagggcttcataacaatgggtatcattggc |
28146997 |
T |
|
| Q |
714 |
tacctcaaaagaaaaacatatcttgaataattaacatagtttttacaagtagctagttcattaatatatt |
783 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28146996 |
cacctcaaaagaaaaacatatcttgaataattaacatagtttttacaagtagctagttcattaatatatt |
28146927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 77 - 512
Target Start/End: Complemental strand, 28183834 - 28183403
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28183834 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaattctcatataatacaactgtggtagacaccttattacagaagtggtgaa |
28183735 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
276 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28183734 |
aacaattttcaacttttcacatcccttgatttttattcttgtaaggttttggagggagaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
28183635 |
T |
|
| Q |
277 |
aaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactt |
376 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| | | || |||||||||||| |||||| | | ||| | |
|
|
| T |
28183634 |
agaacatccaaatcaatgtcttccaaagctaagttcatttgccgttcatttatttcatcgacacgaaagatactttctacattggag---tgatctacct |
28183538 |
T |
|
| Q |
377 |
tcagtctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaacacaatgcataaaataagaataacaaagt |
476 |
Q |
| |
|
|| |||||||||| |||||| || |||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28183537 |
cgagactttccaaagcacaaaaatgttcgacattcccactcaattcctgcaataaatgaatgggaaataaacac-atgcataaaataagaataacaaagt |
28183439 |
T |
|
| Q |
477 |
catataagtacaatagagatgataaaaggctctgga |
512 |
Q |
| |
|
| ||||||||||||||||||||| ||||| |||| |
|
|
| T |
28183438 |
tctgtaagtacaatagagatgataataggctgtgga |
28183403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 14 - 503
Target Start/End: Original strand, 28481960 - 28482444
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
113 |
Q |
| |
|
||||||||||||||||||||| ||| ||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28481960 |
atttcaacttgttgcactttactactacaagtatttgtagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
28482059 |
T |
|
| Q |
114 |
attgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacattgcttgatttttatt |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| |
|
|
| T |
28482060 |
attgcactcttcaattctcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacatcgcatgatctttaaa |
28482159 |
T |
|
| Q |
214 |
cttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaaaacatccaaatcaatgtatttcaaagctaagttca |
313 |
Q |
| |
|
||||| ||||| ||| |||| ||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||| | ||||||||||||| ||| |
|
|
| T |
28482160 |
tgggtaaggttttggaggaaaaatgaatttttgggacccacaaaaaggaatgtcatcataggcagaacattcaaatcaatttctttcaaagctaagctca |
28482259 |
T |
|
| Q |
314 |
tttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactttcagtctttccaaagagagaaaatgatccacattccc |
413 |
Q |
| |
|
||| |||||||||||||||||||| |||| || | ||||||||||||||| || ||||| | ||| | ||||||| ||||||| ||||| |||||| |
|
|
| T |
28482260 |
gttgttgttcatttatttcattcagacaaaagacatcttctactttggagttattatttaccatgagtgtctccaaagctagaaaattatccatattccc |
28482359 |
T |
|
| Q |
414 |
actcaattcctgtaataactgaatgggaaataaacacaatgcataaaataagaataacaaagtcatataagtacaatagagatgataaaa |
503 |
Q |
| |
|
||| |||||| ||||| |||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
28482360 |
acttgattcctacaataaatgaatgggaaataaacac-atgtataaaataagaa----caagtcctataagtacaatagagatgataaaa |
28482444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 14 - 503
Target Start/End: Original strand, 28510772 - 28511256
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
113 |
Q |
| |
|
||||||||||||||||||||| |||| ||| | | |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28510772 |
atttcaacttgttgcactttactacaacaagtattcttagttttgggaagcatgtctttgttgtattctccaaatcatcttcaataatatgcttcaactc |
28510871 |
T |
|
| Q |
114 |
attgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacattgcttgatttttatt |
213 |
Q |
| |
|
||||||||||||||| |||| | | |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| || |||| |||| |
|
|
| T |
28510872 |
attgcactcttcaattctcaaagtaaacaactgtggcagataccttattatagaagtggagaaaacaattttcaatttttcacatcgcatgatctttaaa |
28510971 |
T |
|
| Q |
214 |
cttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaaaacatccaaatcaatgtatttcaaagctaagttca |
313 |
Q |
| |
|
||||| ||||| ||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||| |
|
|
| T |
28510972 |
tgggtaaggttttggaggaaaaatgaatttttgggacccacaaaaaggaatgtcatcataggcaaaacattcaaatcaatgtctttcaaagctaagctca |
28511071 |
T |
|
| Q |
314 |
tttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactttcagtctttccaaagagagaaaatgatccacattccc |
413 |
Q |
| |
|
||| |||||||||||||||||||| |||| || | || |||||||||||| || ||||| ||| | ||||||| ||||||| ||||| |||||| |
|
|
| T |
28511072 |
gttgttgttcatttatttcattcagacaaaagacatcttttactttggagttattatttaccaagagtgtctccaaagctagaaaattatccatattccc |
28511171 |
T |
|
| Q |
414 |
actcaattcctgtaataactgaatgggaaataaacacaatgcataaaataagaataacaaagtcatataagtacaatagagatgataaaa |
503 |
Q |
| |
|
||| |||||| ||||| |||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
28511172 |
acttgattcctacaataaatgaatgggaaataaacac-atgtataaaataagaa----caagtcctataagtacaatagagatgataaaa |
28511256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 444
Target Start/End: Complemental strand, 28053629 - 28053208
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
113 |
Q |
| |
|
||||||||||||| ||||||| |||| |||| |||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28053629 |
atttcaacttgttacactttactacaaaaattgtatttaactttgggaagcatgtctttgctgtattctccaaatcatcttcaaaaatatgcttcaactc |
28053530 |
T |
|
| Q |
114 |
attgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacattgcttgatttttatt |
213 |
Q |
| |
|
||||| |||||||| |||| | | ||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || | |
|
|
| T |
28053529 |
gttgcattcttcaattctcaaagtaagcaactgtggtagataccttattatagaagtggagaatacaattttcaatttttcacattgcttgatttgtaat |
28053430 |
T |
|
| Q |
214 |
cttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaaaacatccaaatcaatgtatttcaaagctaagttca |
313 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
28053429 |
tctgtaaggttttgaagggaaaacgaactgttgggacccacaaaaaggcatgtcatcataggcagaacatccaaatcaatgactttcaaagctaagttca |
28053330 |
T |
|
| Q |
314 |
tttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactttcagtctttccaaagagagaaaatgatccacattccc |
413 |
Q |
| |
|
|||| |||||||||| ||||||||| ||||| |||||||||||| |||||||| ||||| | || || |||||||||||||||| |||| |
|
|
| T |
28053329 |
tttgatgttcatttaattcattcagacaaat---------tactttggagttattctttaccacgagtctcttcagagcgagaaaatgatccacaatccc |
28053239 |
T |
|
| Q |
414 |
actcaattcctgtaataactgaatgggaaat |
444 |
Q |
| |
|
|||||||||||| ||||| |||||| ||||| |
|
|
| T |
28053238 |
actcaattcctgcaataaatgaatgtgaaat |
28053208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 444
Target Start/End: Complemental strand, 28064054 - 28063633
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
113 |
Q |
| |
|
||||||||||||| ||||||| |||| |||| |||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28064054 |
atttcaacttgttacactttactacaaaaattgtatttaactttgggaagcatgtctttgctgtattctccaaatcatcttcaaaaatatgcttcaactc |
28063955 |
T |
|
| Q |
114 |
attgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacattgcttgatttttatt |
213 |
Q |
| |
|
||||| |||||||| |||| | | ||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || | |
|
|
| T |
28063954 |
gttgcattcttcaattctcaaagtaagcaactgtggtagataccttattatagaagtggagaatacaattttcaatttttcacattgcttgatttgtaat |
28063855 |
T |
|
| Q |
214 |
cttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaaaacatccaaatcaatgtatttcaaagctaagttca |
313 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
28063854 |
tctgtaaggttttgaagggaaaacgaactgttgggacccacaaaaaggcatgtcatcataggcagaacatccaaatcaatgactttcaaagctaagttca |
28063755 |
T |
|
| Q |
314 |
tttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactttcagtctttccaaagagagaaaatgatccacattccc |
413 |
Q |
| |
|
|||| |||||||||| ||||||||| ||||| |||||||||||| |||||||| ||||| | || || |||||||||||||||| |||| |
|
|
| T |
28063754 |
tttgatgttcatttaattcattcagacaaat---------tactttggagttattctttaccacgagtctcttcagagcgagaaaatgatccacaatccc |
28063664 |
T |
|
| Q |
414 |
actcaattcctgtaataactgaatgggaaat |
444 |
Q |
| |
|
|||||||||||| ||||| |||||| ||||| |
|
|
| T |
28063663 |
actcaattcctgcaataaatgaatgtgaaat |
28063633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 77 - 425
Target Start/End: Complemental strand, 28132017 - 28131669
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcat-ataatacaactgtggtagacaccttattacagaagtggaga |
175 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| || ||||| |||||||| |||| |||| ||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
28132017 |
tattctccaaatcatcttcaattatatgcttcaattctttgcattcttcaattctcaagataag-caactgtggtagataccttattatagaagtggaga |
28131919 |
T |
|
| Q |
176 |
aaacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcatagg |
275 |
Q |
| |
|
||||||||||||||||||||||| || |||| |||| ||||| ||||| ||| ||||| |||| || |||||||||||||||||||||||| ||| |
|
|
| T |
28131918 |
aaacaattttcaatttttcacatcgcatgatctttaaatgggtaaggttttggaggaaaaacaaattttttggacccacaaaaaggcatgtcatcgcagg |
28131819 |
T |
|
| Q |
276 |
caaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttact |
375 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28131818 |
caaaacatccaaatcaatgtctttcaaagctaagttcatttgctgttcatttatttcatttatacaaatgatactttctactttggagttattctttact |
28131719 |
T |
|
| Q |
376 |
ttcagtctttccaaagagagaaaatgatccacattcccactcaattcctg |
425 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28131718 |
atgagtctctccaaagagagaaaatggtccacattcccactcaattcctg |
28131669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 77 - 475
Target Start/End: Complemental strand, 28081813 - 28081414
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||| ||||| ||||||| || ||||||| ||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
28081813 |
tattctccaaatcatcttcaataatatgctttaactctttgcattcttcaactcttatataatgcaactgtggcagacaccttattatacaagtggagaa |
28081714 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgattttta-ttcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcatagg |
275 |
Q |
| |
|
|| ||||||||||||||||||| || ||||| ||| ||||| |||| ||||| ||||||| ||| | || ||||||||||||||||||||||||||||| |
|
|
| T |
28081713 |
aataattttcaatttttcacatcgcatgattcttaattctt-taaggttttggagggaaattgaaattttaggacccacaaaaaggcatgtcatcatagg |
28081615 |
T |
|
| Q |
276 |
caaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttact |
375 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||| |||||||||||||| |||||| || | ||| |
|
|
| T |
28081614 |
cagaacatccaaatcaatgactttcaaagctaagttcattttctgttcatttatttcattgagacaaacgatactttctacttcggagttattatataca |
28081515 |
T |
|
| Q |
376 |
ttcagtctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaacaca-atgcataaaataagaataacaaa |
474 |
Q |
| |
|
||| | | |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
28081514 |
acaagtttctttaaagcgagaaaatgatccacattcccactcaattcctgcaataaatgaatgggaaataaacacatatgcacaaaataagaatatcaaa |
28081415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 77 - 475
Target Start/End: Complemental strand, 27918442 - 27918045
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||| ||||| |||||||| || |||| | |||||| || ||||| |||| | |||||||| ||| |
|
|
| T |
27918442 |
tattctccaaatcatcttcaataatatacttcaactctttgcattcttcaattcttatatgaagcaactgcggcagacatcttaaaatagaagtggggaa |
27918343 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27918342 |
aacaattttcaatttttcacattgcttgatttttaatactgtaaggttttggagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
27918243 |
T |
|
| Q |
277 |
aaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactt |
376 |
Q |
| |
|
| ||||| ||||| |||| ||| |||| |||| |||||||| ||||||||||||||||| || |||| ||| ||||||||||||||||| || ||||| |
|
|
| T |
27918242 |
agaacattcaaataaatgaattccaaacctaatttcatttgttgttcatttatttcattgagacaaaagatgctttctactttggagttattatttacca |
27918143 |
T |
|
| Q |
377 |
tcagtctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaacacaatgcataaaataagaataacaaag |
475 |
Q |
| |
|
|||||| |||||| | |||||| || |||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||| |||||||||| |
|
|
| T |
27918142 |
cgagtcttcccaaagcgctaaaatgctcgacattcccactcaaatcctgtaataaacgaatgggaaataaacac-attaataaaataacaataacaaag |
27918045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 14 - 332
Target Start/End: Complemental strand, 28002332 - 28002014
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
113 |
Q |
| |
|
|||||||||||||||||||| |||| || | | ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28002332 |
atttcaacttgttgcacttttctacaaaaagtattcttagctttgggaagcatgtctttgttgtattctccaaatcatcttcaataatatgcttcaactc |
28002233 |
T |
|
| Q |
114 |
attgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacattgcttgatttttatt |
213 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||| | |
|
|
| T |
28002232 |
attgcactcttcaattctcatataattcaactgtggtagacaccttattatagaagtggagaaaacaattttcaatttttcacattttataattttcaag |
28002133 |
T |
|
| Q |
214 |
cttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaaaacatccaaatcaatgtatttcaaagctaagttca |
313 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||| ||||| ||||||||||||||||| |
|
|
| T |
28002132 |
tgtgtaaggttttggagggaaaacgaatttttgggacccataaaaaggcatgtcatcataggcagaacaagcaattcaataattttcaaagctaagttca |
28002033 |
T |
|
| Q |
314 |
tttgctgttcatttatttc |
332 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
28002032 |
tttgttgttcatttatttc |
28002014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 77 - 496
Target Start/End: Original strand, 17746357 - 17746774
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| ||||| |||||||| ||||||| | ||| ||||||||||||||||||| |||| | ||||| |
|
|
| T |
17746357 |
tattctccaaatcatcttcaaaaatatgtgtcaactctttgcattcttcaattctcatatgacgcaattgtggtagacaccttattatagaattagagaa |
17746456 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
276 |
Q |
| |
|
||||||| |||||||||||||| |||||| | ||| ||||| ||||| |||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
17746457 |
aacaattatcaatttttcacatcgcttgactgttaaatcagtaaggttttggagggaaaacgaatttttgggacccacaaaaaggtatgtcatcataggc |
17746556 |
T |
|
| Q |
277 |
aaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactt |
376 |
Q |
| |
|
| |||| ||||| ||| | || |||||||||||||||||||||||||||| ||||||| || |||| |||||||||||||| ||||| || ||||| | |
|
|
| T |
17746557 |
agaacacccaaaataatttcttccaaagctaagttcatttgctgttcatttctttcattgagacaaaatatactttctactttagagtttttgtttacat |
17746656 |
T |
|
| Q |
377 |
tcagtctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaacaca-atgcataaaataagaataacaaag |
475 |
Q |
| |
|
| ||| ||||||||| ||||||| ||||||| ||||||||||||||| ||||| |||||| |||||||||||| || |||||||||||||||||||| |
|
|
| T |
17746657 |
tgagtgtttccaaagcacgaaaatgttccacatccccactcaattcctgcaataaatgaatgagaaataaacacacat--ataaaataagaataacaaag |
17746754 |
T |
|
| Q |
476 |
tcatataagtacaatagagat |
496 |
Q |
| |
|
|| | |||||||||||||||| |
|
|
| T |
17746755 |
tc-tgtaagtacaatagagat |
17746774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 77 - 496
Target Start/End: Original strand, 19047677 - 19048094
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| ||||| |||||||| ||||||| | ||| ||||||||||||||||||| |||| | ||||| |
|
|
| T |
19047677 |
tattctccaaatcatcttcaaaaatatgtgtcaactctttgcattcttcaattctcatatgacgcaattgtggtagacaccttattatagaattagagaa |
19047776 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
276 |
Q |
| |
|
||||||| |||||||||||||| |||||| | ||| ||||| ||||| |||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
19047777 |
aacaattatcaatttttcacatcgcttgactgttaaatcagtaaggttttggagggaaaacgaatttttgggacccacaaaaaggtatgtcatcataggc |
19047876 |
T |
|
| Q |
277 |
aaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactt |
376 |
Q |
| |
|
| |||| ||||| ||| | || |||||||||||||||||||||||||||| ||||||| || |||| |||||||||||||| ||||| || ||||| | |
|
|
| T |
19047877 |
agaacacccaaaataatttcttccaaagctaagttcatttgctgttcatttctttcattgagacaaaatatactttctactttagagtttttgtttacat |
19047976 |
T |
|
| Q |
377 |
tcagtctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaacaca-atgcataaaataagaataacaaag |
475 |
Q |
| |
|
| ||| ||||||||| ||||||| ||||||| ||||||||||||||| ||||| |||||| |||||||||||| || |||||||||||||||||||| |
|
|
| T |
19047977 |
tgagtgtttccaaagcacgaaaatgttccacatccccactcaattcctgcaataaatgaatgagaaataaacacacat--ataaaataagaataacaaag |
19048074 |
T |
|
| Q |
476 |
tcatataagtacaatagagat |
496 |
Q |
| |
|
|| | |||||||||||||||| |
|
|
| T |
19048075 |
tc-tgtaagtacaatagagat |
19048094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 79 - 425
Target Start/End: Original strand, 27461229 - 27461566
Alignment:
| Q |
79 |
ttctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaa |
178 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||| ||||| |||||||| |||||| || || |||||||||||||||| || |||||||||||||| |
|
|
| T |
27461229 |
ttctccaaatcatattcaattatatgcttcaactctttgcattcttcaattctcataaaaagcagttgtggtagacaccttactatagaagtggagaaaa |
27461328 |
T |
|
| Q |
179 |
caattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaa |
278 |
Q |
| |
|
|| |||||||||||||||| ||| ||||||||| ||||||||| ||||| ||| |||| ||||| || ||||||||||| ||| ||||||||||||||| |
|
|
| T |
27461329 |
cagttttcaatttttcacaatgcatgatttttaatcttgtaaggttttggaggaaaaatgaatttttcggacccacaaataggaatgtcatcataggcat |
27461428 |
T |
|
| Q |
279 |
aacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactttc |
378 |
Q |
| |
|
|| || ||||||||||| || ||| |||||||||||| || |||||| || |||| |||||||||||||||||||| || | ||| | |
|
|
| T |
27461429 |
aatatacaaatcaatgtcttcaaaacctaagttcattttct---------cttcattgagacaaaatatactttctactttggagttattttctaccatg |
27461519 |
T |
|
| Q |
379 |
agtctttccaaagagagaaaatgatccacattcccactcaattcctg |
425 |
Q |
| |
|
||||||| |||||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
27461520 |
agtcttttcaaagagataaaatgctccacatttacactcaattcctg |
27461566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 77 - 266
Target Start/End: Complemental strand, 27975419 - 27975230
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||| || || |||||||| ||| |
|
|
| T |
27975419 |
tattctccaaatcatattcaattatatgcttcaactctttgcactcttcaattctcatagaatacaactgtggtagacaccatactatagaagtggggaa |
27975320 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgt |
266 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| | | | || ||||| ||| |||||||||| |||||||||||||| |||||||| |
|
|
| T |
27975319 |
aacaattttcaatttttcacattgcatgatttttaattctatcaggttttggaggaaaaacgaatttttgggacccacaaagaggcatgt |
27975230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 28481792 - 28481905
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
113 |
Q |
| |
|
||||||||||||||||||||| |||| ||| | | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28481792 |
atttcaacttgttgcactttactacaccaagtattcttagctttgggaagcatgtctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
28481891 |
T |
|
| Q |
114 |
attgcactcttcaa |
127 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
28481892 |
attgcactcttcaa |
28481905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 77 - 268
Target Start/End: Complemental strand, 11418801 - 11418610
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||| ||||| |||||||| || |||| | |||||| ||| | ||| |||||| |||||| ||||| |
|
|
| T |
11418801 |
tattctccaagtcatcttcaatcatatgcttcaactctttgcattcttcaattcttatatgaagcaactgcggttggcacattattatagaagtagagaa |
11418702 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtca |
268 |
Q |
| |
|
||||| |||||||||||||||| ||| ||||| || | ||||| |||| ||| || | ||||| ||| ||||||||||||| ||||||| |
|
|
| T |
11418701 |
aacaaatttcaatttttcacatcccttaattttcatcttagtaaggtttttgaggtaacaagaatttttgagacccacaaaaagacatgtca |
11418610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 80 - 362
Target Start/End: Complemental strand, 12146088 - 12145806
Alignment:
| Q |
80 |
tctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaac |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| || ||||| || |||| | |||||| ||||| ||| |||||| |||||| |||||||| |
|
|
| T |
12146088 |
tctccaaatcatcttcaatcatatgcttcaactcattgcattcatcaattcttatatgaagcaactgcggtaggcacattattatagaagtagagaaaac |
12145989 |
T |
|
| Q |
180 |
aattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaaa |
279 |
Q |
| |
|
|| || ||||||||||||| ||| || || || | ||||| |||| |||||||| |||| ||| |||| |||||| ||||| |||||||| | | |
|
|
| T |
12145988 |
aaattccaatttttcacatcccttaatgttcatcttagtaaggtttttgagggaaaaataatttttgcaacccttaaaaagacatgttatcataggtaga |
12145889 |
T |
|
| Q |
280 |
acatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttgga |
362 |
Q |
| |
|
|| ||| ||||||| || ||| | |||||||| ||||| ||| ||| |||||| || |||| ||| ||||||||||||| |
|
|
| T |
12145888 |
ttatgcaactcaatgtcttgcaacccaaagttcatctgctgctcacttacttcattgagacaaaatatattttctactttgga |
12145806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 27347513 - 27347393
Alignment:
| Q |
78 |
attctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaa |
177 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||| | |||||| || |||| | |||||| ||||||||| |||||| |||||| |||||| |
|
|
| T |
27347513 |
attctccaaatcatcttcaatcatatgcttcaactctttgcatttttcaattcttatatgaagcaactgcggtagacacattattatagaagtagagaaa |
27347414 |
T |
|
| Q |
178 |
acaattttcaatttttcacat |
198 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
27347413 |
gcaatttccaatttttcacat |
27347393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 551 - 635
Target Start/End: Original strand, 28521255 - 28521339
Alignment:
| Q |
551 |
tacagtatttaattaaattaatattgttatttaattttcaacactccaacctttttgtttttcaatctgctacccttcctccatt |
635 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
28521255 |
tacattatttaattaaattaatattgtcatttacttttcaacactccaacacttttgtttttcaatctgctatccttcctccatt |
28521339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 18026654 - 18026775
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||| |||||||| || |||| || |||||| ||||| ||| |||||| |||| | ||||| |
|
|
| T |
18026654 |
tattctccaaatcatcttcaataatatgcttcaactctttgcaatcttcaattcttatatgatgcaactgcggtaggcacattattatagaaatagagaa |
18026753 |
T |
|
| Q |
177 |
aacaattttcaatttttcacat |
198 |
Q |
| |
|
|| ||| | ||||||||||||| |
|
|
| T |
18026754 |
aataatctccaatttttcacat |
18026775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 77 - 466
Target Start/End: Complemental strand, 27376274 - 27375886
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||| || ||||| || |||| | |||||| ||||| ||| |||||| |||||| ||||| |
|
|
| T |
27376274 |
tattctccaaatcatcttcaatcatatgcttcaactccttgcattcatcaattcttatatgaagcaactgcggtaggcacattattatagaagtagagaa |
27376175 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
276 |
Q |
| |
|
||||| || ||| |||| |||| | | ||||| || ||||||| |||| || ||||| ||||| ||| ||||| |||||| ||||| |||||||| |
|
|
| T |
27376174 |
aacaaattccaaatttttacatctcataattttgatcattgtaagttttttgagagaaaatgaatttttgagacccttaaaaagacatgttatcataggt |
27376075 |
T |
|
| Q |
277 |
aaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactt |
376 |
Q |
| |
|
| | || ||| ||||||| || ||| | | |||||| ||||| ||| ||| |||||| || |||| ||| ||||||||| ||| | | ||| | |
|
|
| T |
27376074 |
agattatgcaactcaatgtcttgcaacccaatgttcatctgctgctcacttacttcattgagacaaaatatattttctacttcgga---ataatgtacct |
27375978 |
T |
|
| Q |
377 |
tcagtctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaa-caca-atgcataaaataaga |
466 |
Q |
| |
|
|||| ||||||| ||||||||||| || || ||| ||||||||||||| | || ||||||| ||||||| ||| ||||||||||||||| |
|
|
| T |
27375977 |
tcagcttttccaacgagagaaaatgctcaacgttcacactcaattcctgccacaaatgaatggcaaataaattacacatgcataaaataaga |
27375886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 632 - 717
Target Start/End: Complemental strand, 28050983 - 28050898
Alignment:
| Q |
632 |
cattgaatcaacgcccacattcacattttcatataagttggagacaaggacgaagggcttcataacaatgggtatcattggctacc |
717 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
28050983 |
cattgaatcaatccccacattcacattttcgtgtaagttgtagacaaggacgaagggctccataacaatggctatcattggctacc |
28050898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 279 - 469
Target Start/End: Complemental strand, 27974415 - 27974226
Alignment:
| Q |
279 |
aacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactttc |
378 |
Q |
| |
|
||||||||||||||| || |||| || || ||||||| ||||||||||||||||| || |||| |||||||||||| ||||||| || ||||| |
|
|
| T |
27974415 |
aacatccaaatcaattctttccaaacctgagatcatttgatgttcatttatttcatttagacaaacaatactttctactatggagttattatttaccacg |
27974316 |
T |
|
| Q |
379 |
agtctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaacacaatgcataaaataagaata |
469 |
Q |
| |
|
| || | ||| |||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
27974315 |
ggactcttagaagcgagaaaatgatccacattcccactcaattcctacagtaaacgaatgagaaataaacac-atgcataaaataagaata |
27974226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 558 - 620
Target Start/End: Complemental strand, 28182941 - 28182879
Alignment:
| Q |
558 |
tttaattaaattaatattgttatttaattttcaacactccaacctttttgtttttcaatctgc |
620 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
28182941 |
tttaattaaattaatattgttatttaattttcaacaccccaacccttttgtttttcaatctgc |
28182879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 27392396 - 27392517
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||| ||||| || | ||| | || | | |||||||||||| ||| |||||| |||||| ||||| |
|
|
| T |
27392396 |
tattctccaaatcatcttcaatcaaatgcttcaactctttgcagtcattaattattatgtgaagcaactgtggtaggcacattattatagaagtagagaa |
27392495 |
T |
|
| Q |
177 |
aacaattttcaatttttcacat |
198 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
27392496 |
aacaatttccaatttttcacat |
27392517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 572 - 632
Target Start/End: Complemental strand, 28052354 - 28052294
Alignment:
| Q |
572 |
tattgttatttaattttcaacactccaacctttttgtttttcaatctgctacccttcctcc |
632 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
28052354 |
tattgttatttaattttcgacactccaacccttttgtttttcaatctgctatccttcctcc |
28052294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 629 - 729
Target Start/End: Original strand, 28521387 - 28521486
Alignment:
| Q |
629 |
ctccattgaatcaacgcccacattcacattttcatataagttggagacaaggacgaagggcttcataacaatgggtatcattggctacctcaaaagaaaa |
728 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||| ||| |||| ||||| |||||||||| |
|
|
| T |
28521387 |
ctccattgaatcaac-cccacattcacatttttgtataagttgtagacaaggacgaagatcttcataaccatgagtagcattagctactccaaaagaaaa |
28521485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 81 - 327
Target Start/End: Original strand, 26210270 - 26210516
Alignment:
| Q |
81 |
ctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaaca |
180 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||| | | | | | ||| |||||||| || |||| ||||| |||||||||||| |
|
|
| T |
26210270 |
ctccaaatcatcttcaatgatatgcttcaactctttgcattcttctacttttagtttaaccaattgtggtagtcatcttaaaacagatgtggagaaaaca |
26210369 |
T |
|
| Q |
181 |
attttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaaaa |
280 |
Q |
| |
|
|||| ||||||||||||| | |||||| || ||||||| || | ||| ||| |||| ||| ||||||||||||| || |||||||||||| | |
|
|
| T |
26210370 |
atttccaatttttcacatctatcgattttcatctttgtaaggttattgaggacaaatgaatatttgagacccacaaaaagacacctcatcataggcagat |
26210469 |
T |
|
| Q |
281 |
catccaaatcaatgtatttcaaagctaagttcatttgctgttcattt |
327 |
Q |
| |
|
||| ||| | ||||| || |||| |||||||||||| ||| ||||| |
|
|
| T |
26210470 |
cattcaacttaatgttttccaaacttaagttcatttgttgtccattt |
26210516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 28147801 - 28147742
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatat |
136 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||||| |||||||| ||||||| |
|
|
| T |
28147801 |
tattctccaaatcatcttcaataatatgcctcaactcattgcattcttcaattctcatat |
28147742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 198
Target Start/End: Original strand, 26180779 - 26180896
Alignment:
| Q |
81 |
ctccaaatcatcttcaatgatatgcttcaactcattgcactcttc-aatactcatataatacaactgtggtagacaccttattacagaagtggagaaaac |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||| | | || | ||| ||| |||||||| || |||| ||||| ||||||||||| |
|
|
| T |
26180779 |
ctccaaatcatcttcaatgatatgcttcaactctttgcattcttctacttctagtctaa-ccaattgtggtaggcatcttaaaacagatgtggagaaaac |
26180877 |
T |
|
| Q |
180 |
aattttcaatttttcacat |
198 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
26180878 |
aatttccaatttttcacat |
26180896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 587
Target Start/End: Complemental strand, 28131649 - 28131575
Alignment:
| Q |
513 |
ataaattattacaatataatgtaacaaaaagaaagcactacagtatttaattaaattaatattgttatttaattt |
587 |
Q |
| |
|
||||||||||| | || |||||||| ||||||||| |||||| |||||||||||||||| |||| |||||||||| |
|
|
| T |
28131649 |
ataaattattatattagaatgtaaccaaaagaaagtactacattatttaattaaattaacattgatatttaattt |
28131575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 198
Target Start/End: Original strand, 26237514 - 26237631
Alignment:
| Q |
81 |
ctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaaca |
180 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||| | | | | | ||| |||||||| || |||| ||||| |||||||||||| |
|
|
| T |
26237514 |
ctccaaatcatcttcaatgatatgcttcaactctttgcattcttctacttttagtttaaccaattgtggtagtcatcttaaaacagatgtggagaaaaca |
26237613 |
T |
|
| Q |
181 |
attttcaatttttcacat |
198 |
Q |
| |
|
|||| ||||||||||||| |
|
|
| T |
26237614 |
atttccaatttttcacat |
26237631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 28481687 - 28481746
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatat |
136 |
Q |
| |
|
||||||||| |||||||||||| |||||| ||||||||||||| |||||||| ||||||| |
|
|
| T |
28481687 |
tattctccatatcatcttcaataatatgcctcaactcattgcattcttcaattctcatat |
28481746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 277
Target Start/End: Original strand, 26131742 - 26131938
Alignment:
| Q |
81 |
ctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataata--caactgtggtagacaccttattacagaagtggagaaaa |
178 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||| ||| | ||| || | || ||| |||||||| || |||| | ||| |||||||||| |
|
|
| T |
26131742 |
ctccaaatcatcttcaatgaaatgcttcaactctttgcattct--attacatgtagactaaccaattgtggtaggcatcttaaaatagatgtggagaaaa |
26131839 |
T |
|
| Q |
179 |
caattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggca |
277 |
Q |
| |
|
|||||| ||||||||||||||| |||| | || ||||||| |||| ||| ||| |||| ||| |||| |||||||| |||||||||||||||| |
|
|
| T |
26131840 |
caatttccaatttttcacattgaacgattctcatctttgtaaggtttttgaggacaaatgaatagttaagaccgacaaaaagacatgtcatcataggca |
26131938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 582
Target Start/End: Complemental strand, 28052525 - 28052450
Alignment:
| Q |
509 |
tggaataaattatta--caatataatgtaacaaaaagaaagcactacagtatttaattaaattaatattgttattt |
582 |
Q |
| |
|
|||| |||||||||| || ||||||| ||| ||||||||| | |||| ||||||||||||||||||||||||||| |
|
|
| T |
28052525 |
tggattaaattattattcattataatgcaaccaaaagaaagtagtacattatttaattaaattaatattgttattt |
28052450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 582
Target Start/End: Complemental strand, 28062950 - 28062875
Alignment:
| Q |
509 |
tggaataaattatta--caatataatgtaacaaaaagaaagcactacagtatttaattaaattaatattgttattt |
582 |
Q |
| |
|
|||| |||||||||| || ||||||| ||| ||||||||| | |||| ||||||||||||||||||||||||||| |
|
|
| T |
28062950 |
tggattaaattattattcattataatgcaaccaaaagaaagtagtacattatttaattaaattaatattgttattt |
28062875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 26142474 - 26142593
Alignment:
| Q |
81 |
ctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataata--caactgtggtagacaccttattacagaagtggagaaaa |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||| || | ||| ||||| |||| || | || ||| |||||||| || |||| | ||| |||||||||| |
|
|
| T |
26142474 |
ctccaaatcatcttcaatgatatgcttcaattcttcgcattcttc--tacttgtagactaaccaattgtggtagccatcttaaaatagatgtggagaaaa |
26142571 |
T |
|
| Q |
179 |
caattttcaatttttcacattg |
200 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
26142572 |
caatttccaatttttcacattg |
26142593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 447
Target Start/End: Original strand, 18026956 - 18027021
Alignment:
| Q |
382 |
ctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaa |
447 |
Q |
| |
|
|||||||||| || |||||| ||||||||||||||| ||||||| | || ||||||||||||||| |
|
|
| T |
18026956 |
ctttccaaagcgacaaaatgctccacattcccactccattcctgccacaaatgaatgggaaataaa |
18027021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 11418885 - 11418825
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgt |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||| | ||||||||||||||||||| ||||||| |
|
|
| T |
11418885 |
atttcaacttgttgcactttgctacaacaagtgtttttagctttgggaagcatgtctttgt |
11418825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 27975506 - 27975442
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgta |
78 |
Q |
| |
|
||||||||||||||||| || ||||| ||| | ||||| ||||||||||||| ||||||||||| |
|
|
| T |
27975506 |
atttcaacttgttgcacctttttacaacaagtgtttttaactttgggaagcatgtctttgttgta |
27975442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 26115163 - 26115206
Alignment:
| Q |
82 |
tccaaatcatcttcaatgatatgcttcaactcattgcactcttc |
125 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
26115163 |
tccaaatcgtcttcaatgatatgcttcaactctttgcattcttc |
26115206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 28132104 - 28132041
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgt |
77 |
Q |
| |
|
||||||||||||||||||||| |||| ||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
28132104 |
atttcaacttgttgcactttactacaacaaccatttttaactttgggaagcatgtctttgttgt |
28132041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 494
Target Start/End: Complemental strand, 28001964 - 28001923
Alignment:
| Q |
453 |
tgcataaaataagaataacaaagtcatataagtacaatagag |
494 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||| |||| |
|
|
| T |
28001964 |
tgcataaaataagaataacaaagtcatgtaaatacaacagag |
28001923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257 (Bit Score: 348; Significance: 0; HSPs: 3)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 14 - 512
Target Start/End: Complemental strand, 17483 - 16985
Alignment:
| Q |
14 |
atttcaacttgttgcactttattacagcaattccttttagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
113 |
Q |
| |
|
||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17483 |
atttcaacttgttgcactttactacagcaagagattgtagctttgggaagcatatctttgttgtattctccaaatcatcttcaatgatatgcttcaactc |
17384 |
T |
|
| Q |
114 |
attgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacattgcttgatttttatt |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
17383 |
attgcactcttcaattgtcatataatacaactgtggtagacaccttattacagaagtggagaaaacaattttcaatttttcacattgcttgatttttaat |
17284 |
T |
|
| Q |
214 |
cttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggca-aaacatccaaatcaatgtatttcaaagctaagttc |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
17283 |
tctgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggcaggaacatccaaatcaatgtatttcaaagctaagttc |
17184 |
T |
|
| Q |
313 |
atttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactttcagtctttccaaagagagaaaatgatccacattcc |
412 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| | ||||| ||||||| |||||||| ||||| ||||| |
|
|
| T |
17183 |
atttgctgttcatttatttcattcagacaaaagatactttctactttggagttattctttacaatgagtctctccaaagcgagaaaattatccatattcc |
17084 |
T |
|
| Q |
413 |
cactcaattcctgtaataactgaatgggaaataaacacaatgcataaaataagaataacaaagtcatataagtacaatagagatgataaaaggctctgga |
512 |
Q |
| |
|
|||| ||| ||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||| | ||| ||||||||||||||||||| ||| |||| |
|
|
| T |
17083 |
cactagattgctgcaataaatgaatgggaaataaacac-atgtataaaataagaataacaaagtgctgtaattacaatagagatgataaaaagctatgga |
16985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 626 - 696
Target Start/End: Complemental strand, 16756 - 16686
Alignment:
| Q |
626 |
ttcctccattgaatcaacgcccacattcacattttcatataagttggagacaaggacgaagggcttcataa |
696 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||||||| |
|
|
| T |
16756 |
ttcctccattgaatcaacgccgacattcacattttcgtattagttgcagacaaggacgaagggcttcataa |
16686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 566 - 635
Target Start/End: Complemental strand, 16861 - 16791
Alignment:
| Q |
566 |
aattaatattgttatttaattttcaacactccaacctttttgtttttcaatctgcta-cccttcctccatt |
635 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| || ||| ||||||||||||| || |||||||||| |
|
|
| T |
16861 |
aattaatattgttatttaattttgaacactccaacccttctgtgtttcaatctgctatcctttcctccatt |
16791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 147; Significance: 4e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 77 - 335
Target Start/End: Original strand, 8693523 - 8693781
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
8693523 |
tattctccaaatcatcttcaataatatgcttcaactctttgcattcttcaattctcatataaagcaactgtggtagacaccttattatagaagtagagaa |
8693622 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
276 |
Q |
| |
|
|||||||||||||||||||||| |||||| | || |||||| ||||| ||||| ||| |||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
8693623 |
aacaattttcaatttttcacatcgcttgactaataaatatgtaaggttttggagggagaacaaatttttgggagccacaaaaaggcatgtcatcatagga |
8693722 |
T |
|
| Q |
277 |
aaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcatt |
335 |
Q |
| |
|
| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
8693723 |
agaacatccaaatcaataaactccaaagctaagttcatttgctgttcatttatttcatt |
8693781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 78; Significance: 6e-36; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 77 - 466
Target Start/End: Complemental strand, 22391196 - 22390808
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| || ||||| |||||||| ||||||| | ||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
22391196 |
tattctccaaatcatcttcaataatatgcttcaattctttgcattcttcaattctcatatcaagcaactgtggtagacaccttattatagaagtagagaa |
22391097 |
T |
|
| Q |
177 |
aacaattttcaatttttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgttgggacccacaaaaaggcatgtcatcataggc |
276 |
Q |
| |
|
||||| || ||||||||||||| | |||||||| ||||||||||| || || || ||| | ||| ||||| |||||| ||||| |||||||| |
|
|
| T |
22391096 |
aacaaattccaatttttcacatcccacaatttttatcattgtaagatttctgagagataaagaacttttgagacccttaaaaagacatgttatcataggt |
22390997 |
T |
|
| Q |
277 |
aaaacatccaaatcaatgtatttcaaagctaagttcatttgctgttcatttatttcattcaggcaaatgatactttctactttggagttcttctttactt |
376 |
Q |
| |
|
| | || ||| ||||||| || ||| | |||||||| ||||| ||| ||| |||||| || |||| ||| ||||||||| ||| | | ||| |
|
|
| T |
22390996 |
agattatgcaactcaatgtcttgcaacccaaagttcatctgctgctcacttacttcattgagacaaaatatattttctacttcgga---atcatgtacaa |
22390900 |
T |
|
| Q |
377 |
tcagtctttccaaagagagaaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaa-caca-atgcataaaataaga |
466 |
Q |
| |
|
|||| ||||||| ||||||||||| ||||| ||| ||||||||||||| | || ||||||| ||||||| ||| ||||||||||||||| |
|
|
| T |
22390899 |
tcagcttttccaaggagagaaaatgctccacgttcgcactcaattcctgccacaaatgaatggcaaataaattacacatgcataaaataaga |
22390808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 255
Target Start/End: Complemental strand, 8019772 - 8019663
Alignment:
| Q |
148 |
ggtagacaccttattacagaagtggagaaaacaattttcaatt--tttcacattgcttgatttttattcttgtaagattttgaagggaaaacgaattgtt |
245 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||| || | || || ||||| ||| | |||||| ||||| ||||||| |||||| || |
|
|
| T |
8019772 |
ggtagacatcttattatagaagtggagaaaacaattttcaatttcttgcgtatcgcatgattgttaattctgtaaggttttggagggaaaccgaattttt |
8019673 |
T |
|
| Q |
246 |
gggacccaca |
255 |
Q |
| |
|
|||||||||| |
|
|
| T |
8019672 |
gggacccaca |
8019663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 476
Target Start/End: Complemental strand, 8019652 - 8019573
Alignment:
| Q |
396 |
aaaatgatccacattcccactcaattcctgtaataactgaatgggaaataaacacaatgcataaaataagaataacaaagt |
476 |
Q |
| |
|
|||||| |||||||||| ||||||||||| ||||| | |||||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
8019652 |
aaaatgttccacattcctcctcaattcctgcaataaataaatgggaaataaacac-atgcatatgataagaataaccaagt |
8019573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 54911 - 55032
Alignment:
| Q |
77 |
tattctccaaatcatcttcaatgatatgcttcaactcattgcactcttcaatactcatataatacaactgtggtagacaccttattacagaagtggagaa |
176 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||| |||||||| || |||| | |||||| ||||||||| |||| | |||||| ||||| |
|
|
| T |
54911 |
tattctccaaatcatcttcaatcatatgcttcaactctttgcattcttcaattcttatatgaagcaactgaggtagacacattatcatagaagtagagaa |
55010 |
T |
|
| Q |
177 |
aacaattttcaatttttcacat |
198 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
55011 |
aacaatttccaatttttcacat |
55032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 713 - 758
Target Start/End: Complemental strand, 20991508 - 20991463
Alignment:
| Q |
713 |
ctacctcaaaagaaaaacatatcttgaataattaacatagttttta |
758 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
20991508 |
ctaccccaaaagaaaaacaaatcttgaataagtagcatagttttta |
20991463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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