View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17597_low_16 (Length: 370)
Name: NF17597_low_16
Description: NF17597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17597_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 35796054 - 35796394
Alignment:
| Q |
1 |
agagagtacttagttccactatacctcataatgggtagaaattttaggaaaagtagataggatgagagaagagcaccctacctggcaacaactttaatta |
100 |
Q |
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| T |
35796054 |
agagagtacttggttccactatacctcataatgggtagaaattttaggaaaagtagataggatgagagaagagcaccctacctggcaacaactttaatta |
35796153 |
T |
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| Q |
101 |
tatctctctagctccctttttgaatttggttggctgaagatgctgtatgacgttttgtcatggattttaggtatagcttctagaccatattcatgcatgt |
200 |
Q |
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| T |
35796154 |
tatctctctagctccctttttgaatttggttggctgaagatgctgtatgacgttttgtcatggattttaggtatagcttctagaccatattcatgcatgt |
35796253 |
T |
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| Q |
201 |
ttacattactgatcagtggaaatataactgtcaatgatgatatgggtggttgaacaannnnnnnnnnnngttatatcatgtttttgaccacatcaataag |
300 |
Q |
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| T |
35796254 |
ttacattactgatcagtggaaatataactgtcaatgatgatatgggtggttgaaca--tttttttttttgttatatcatgttttttaccacatcaataag |
35796351 |
T |
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| Q |
301 |
catatgttttctattatgatgagatttgattgaatgcatgtgt |
343 |
Q |
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| T |
35796352 |
catatattttctattatgatgggatttgattgaatgcatgtgt |
35796394 |
T |
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