View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17597_low_18 (Length: 352)

Name: NF17597_low_18
Description: NF17597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17597_low_18
NF17597_low_18
[»] scaffold0328 (2 HSPs)
scaffold0328 (5-347)||(13074-13414)
scaffold0328 (4-115)||(15050-15161)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-109)||(5105-5214)
[»] chr7 (56 HSPs)
chr7 (1-109)||(2751340-2751449)
chr7 (1-109)||(21835220-21835329)
chr7 (1-109)||(22119957-22120066)
chr7 (1-109)||(40542933-40543042)
chr7 (1-107)||(23092167-23092274)
chr7 (1-109)||(7275346-7275455)
chr7 (1-109)||(29861739-29861848)
chr7 (1-109)||(7175885-7175994)
chr7 (1-109)||(17196973-17197082)
chr7 (3-109)||(654730-654836)
chr7 (1-109)||(16374063-16374172)
chr7 (1-109)||(18044176-18044285)
chr7 (1-109)||(22703555-22703664)
chr7 (1-109)||(2103124-2103232)
chr7 (1-109)||(10091257-10091366)
chr7 (1-109)||(11997918-11998027)
chr7 (4-115)||(23012534-23012646)
chr7 (1-95)||(3851840-3851935)
chr7 (1-98)||(36772326-36772424)
chr7 (5-109)||(21217860-21217965)
chr7 (5-101)||(42913540-42913637)
chr7 (3-109)||(9718012-9718119)
chr7 (1-115)||(17212116-17212231)
chr7 (1-99)||(21373789-21373888)
chr7 (1-106)||(27009431-27009538)
chr7 (12-107)||(28950942-28951038)
chr7 (3-109)||(2344368-2344475)
chr7 (1-111)||(9683893-9684004)
chr7 (1-109)||(39145675-39145784)
chr7 (1-109)||(22638361-22638466)
chr7 (1-109)||(41907537-41907645)
chr7 (1-103)||(19421306-19421409)
chr7 (1-76)||(31197693-31197768)
chr7 (1-109)||(27312221-27312330)
chr7 (1-109)||(31273983-31274091)
chr7 (1-63)||(31712925-31712987)
chr7 (1-106)||(28089888-28089997)
chr7 (4-109)||(28647038-28647144)
chr7 (1-63)||(25333519-25333581)
chr7 (1-105)||(22643365-22643470)
chr7 (1-109)||(43785322-43785431)
chr7 (1-104)||(33137848-33137951)
chr7 (1-101)||(27704079-27704179)
chr7 (50-109)||(13332495-13332555)
chr7 (4-107)||(23330765-23330869)
chr7 (1-65)||(25102832-25102895)
chr7 (1-115)||(32849654-32849769)
chr7 (3-66)||(35476454-35476517)
chr7 (9-59)||(40332193-40332243)
chr7 (3-52)||(21574127-21574176)
chr7 (1-66)||(47541496-47541561)
chr7 (42-109)||(6491676-6491744)
chr7 (1-76)||(8943424-8943500)
chr7 (42-109)||(14199730-14199798)
chr7 (81-109)||(22299918-22299946)
chr7 (83-115)||(22696383-22696415)
[»] chr6 (30 HSPs)
chr6 (1-109)||(15360121-15360230)
chr6 (1-109)||(654169-654278)
chr6 (1-109)||(11448936-11449045)
chr6 (1-109)||(12390490-12390599)
chr6 (1-109)||(34147411-34147520)
chr6 (1-109)||(34160027-34160136)
chr6 (1-109)||(3222659-3222767)
chr6 (1-109)||(9239040-9239149)
chr6 (1-109)||(1345000-1345109)
chr6 (1-109)||(21148534-21148642)
chr6 (1-101)||(21982344-21982444)
chr6 (12-114)||(17081088-17081191)
chr6 (1-109)||(28672132-28672241)
chr6 (1-109)||(5360094-5360203)
chr6 (1-95)||(9690661-9690756)
chr6 (1-95)||(11007244-11007339)
chr6 (1-105)||(9844007-9844112)
chr6 (1-109)||(9208317-9208426)
chr6 (4-109)||(33499540-33499646)
chr6 (1-76)||(15730518-15730593)
chr6 (3-109)||(17149481-17149588)
chr6 (3-115)||(10377774-10377888)
chr6 (1-109)||(11840966-11841074)
chr6 (1-58)||(14212999-14213056)
chr6 (46-109)||(12591702-12591766)
chr6 (1-56)||(33718492-33718547)
chr6 (14-95)||(28968078-28968160)
chr6 (79-115)||(13753299-13753335)
chr6 (1-64)||(21903642-21903706)
chr6 (4-40)||(32596211-32596247)
[»] chr5 (45 HSPs)
chr5 (1-115)||(8484684-8484799)
chr5 (1-109)||(15641128-15641237)
chr5 (1-109)||(27498754-27498863)
chr5 (3-109)||(32059465-32059572)
chr5 (1-107)||(19456234-19456340)
chr5 (1-109)||(11926524-11926634)
chr5 (1-109)||(18207272-18207381)
chr5 (1-109)||(38684273-38684381)
chr5 (1-109)||(7085649-7085758)
chr5 (1-105)||(35425082-35425187)
chr5 (4-109)||(30485893-30485999)
chr5 (3-109)||(4603842-4603949)
chr5 (1-67)||(22392796-22392862)
chr5 (5-98)||(23270549-23270643)
chr5 (1-109)||(33709526-33709633)
chr5 (3-109)||(10869590-10869697)
chr5 (1-110)||(5049201-5049310)
chr5 (1-105)||(11464931-11465035)
chr5 (1-109)||(34310207-34310316)
chr5 (1-103)||(6014303-6014406)
chr5 (3-109)||(26009289-26009396)
chr5 (3-109)||(31287971-31288078)
chr5 (1-101)||(27487577-27487679)
chr5 (5-109)||(19145439-19145543)
chr5 (5-88)||(34049897-34049981)
chr5 (1-56)||(22693054-22693109)
chr5 (1-109)||(37495112-37495228)
chr5 (1-67)||(41351127-41351192)
chr5 (1-109)||(13038478-13038586)
chr5 (1-109)||(13108473-13108581)
chr5 (5-95)||(9659338-9659429)
chr5 (27-109)||(12398497-12398580)
chr5 (7-105)||(15971151-15971250)
chr5 (1-63)||(21236385-21236447)
chr5 (1-115)||(10399832-10399948)
chr5 (1-68)||(13659268-13659335)
chr5 (1-105)||(42193554-42193657)
chr5 (41-105)||(25587001-25587066)
chr5 (26-109)||(15931124-15931207)
chr5 (1-47)||(38631002-38631048)
chr5 (1-44)||(5067392-5067435)
chr5 (3-62)||(15485316-15485375)
chr5 (3-115)||(31206301-31206415)
chr5 (1-109)||(36954883-36954992)
chr5 (3-63)||(24158191-24158251)
[»] chr8 (46 HSPs)
chr8 (1-109)||(3734646-3734755)
chr8 (1-109)||(4718714-4718823)
chr8 (1-109)||(15259429-15259538)
chr8 (1-109)||(21603299-21603408)
chr8 (1-109)||(34237678-34237787)
chr8 (1-109)||(39349325-39349434)
chr8 (1-109)||(2618255-2618364)
chr8 (1-109)||(8765549-8765658)
chr8 (1-109)||(28193543-28193652)
chr8 (1-109)||(32879348-32879457)
chr8 (1-109)||(4698746-4698855)
chr8 (1-109)||(6953031-6953139)
chr8 (1-109)||(20305977-20306086)
chr8 (1-109)||(21092610-21092719)
chr8 (1-109)||(25248418-25248525)
chr8 (1-115)||(42328067-42328182)
chr8 (1-115)||(19471672-19471788)
chr8 (1-115)||(19542596-19542712)
chr8 (1-115)||(19589984-19590100)
chr8 (1-66)||(2639434-2639499)
chr8 (1-109)||(14633023-14633132)
chr8 (1-109)||(34610710-34610819)
chr8 (5-109)||(42643145-42643250)
chr8 (3-109)||(18128582-18128689)
chr8 (1-109)||(264423-264531)
chr8 (1-109)||(651390-651498)
chr8 (1-109)||(837125-837233)
chr8 (209-326)||(27336812-27336929)
chr8 (209-326)||(29176842-29176959)
chr8 (1-109)||(27746358-27746467)
chr8 (1-109)||(28964102-28964210)
chr8 (5-109)||(10292124-10292228)
chr8 (19-109)||(24999303-24999394)
chr8 (1-109)||(20469986-20470094)
chr8 (1-101)||(21667627-21667727)
chr8 (1-109)||(28088355-28088464)
chr8 (27-109)||(18532176-18532259)
chr8 (1-109)||(1219418-1219527)
chr8 (4-66)||(13749168-13749231)
chr8 (1-99)||(2166776-2166874)
chr8 (1-67)||(7557974-7558039)
chr8 (3-95)||(24018465-24018559)
chr8 (3-115)||(28908886-28908999)
chr8 (1-52)||(33747009-33747060)
chr8 (13-64)||(43817784-43817835)
chr8 (1-115)||(26168872-26168986)
[»] chr3 (61 HSPs)
chr3 (1-109)||(35492976-35493085)
chr3 (1-109)||(8456173-8456282)
chr3 (1-115)||(10190765-10190880)
chr3 (1-109)||(18176910-18177019)
chr3 (1-109)||(40133472-40133581)
chr3 (5-109)||(45272443-45272548)
chr3 (1-109)||(49258285-49258394)
chr3 (1-109)||(53233933-53234042)
chr3 (1-115)||(10083842-10083957)
chr3 (1-109)||(45529777-45529886)
chr3 (1-109)||(46576413-46576522)
chr3 (3-109)||(48977453-48977560)
chr3 (1-109)||(8097302-8097411)
chr3 (1-109)||(15566523-15566631)
chr3 (1-109)||(25289738-25289846)
chr3 (1-109)||(25379826-25379935)
chr3 (1-105)||(26174182-26174287)
chr3 (1-109)||(30257689-30257798)
chr3 (1-109)||(32151489-32151598)
chr3 (1-109)||(39041875-39041984)
chr3 (1-109)||(52821659-52821767)
chr3 (1-109)||(30807176-30807285)
chr3 (1-109)||(21363008-21363117)
chr3 (1-109)||(24407326-24407435)
chr3 (17-109)||(34492614-34492707)
chr3 (1-109)||(53424200-53424308)
chr3 (26-109)||(26108357-26108441)
chr3 (4-114)||(31537864-31537975)
chr3 (5-109)||(2511324-2511429)
chr3 (1-109)||(33398491-33398600)
chr3 (1-109)||(52455672-52455781)
chr3 (1-103)||(29915293-29915395)
chr3 (1-103)||(29964446-29964548)
chr3 (7-109)||(40940890-40940993)
chr3 (9-109)||(1242038-1242139)
chr3 (6-109)||(7470244-7470347)
chr3 (1-76)||(24165738-24165812)
chr3 (1-76)||(54475780-54475855)
chr3 (1-64)||(55371317-55371380)
chr3 (1-66)||(33698729-33698794)
chr3 (1-109)||(53288736-53288844)
chr3 (3-98)||(51532865-51532961)
chr3 (1-68)||(48104984-48105051)
chr3 (1-105)||(8958058-8958164)
chr3 (1-95)||(1692913-1693007)
chr3 (1-115)||(25344081-25344195)
chr3 (3-115)||(26158877-26158983)
chr3 (2-102)||(1178244-1178343)
chr3 (5-109)||(4462698-4462802)
chr3 (1-109)||(19857116-19857225)
chr3 (1-115)||(17579158-17579274)
chr3 (1-45)||(53848457-53848501)
chr3 (3-66)||(6127562-6127625)
chr3 (1-115)||(11390661-11390776)
chr3 (3-97)||(34844455-34844549)
chr3 (3-66)||(49167168-49167231)
chr3 (1-66)||(21776525-21776589)
chr3 (1-45)||(4252419-4252463)
chr3 (4-48)||(33793579-33793623)
chr3 (1-49)||(50731260-50731308)
chr3 (1-49)||(50781546-50781594)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-109)||(39157-39266)
[»] chr4 (50 HSPs)
chr4 (1-109)||(34844781-34844890)
chr4 (1-109)||(40058875-40058984)
chr4 (1-109)||(52983684-52983793)
chr4 (3-115)||(54127367-54127480)
chr4 (1-109)||(27528818-27528927)
chr4 (1-115)||(32986256-32986371)
chr4 (1-109)||(32990500-32990609)
chr4 (1-109)||(34723864-34723973)
chr4 (4-115)||(33696305-33696417)
chr4 (1-115)||(20078007-20078122)
chr4 (1-109)||(5609225-5609334)
chr4 (1-109)||(20566415-20566524)
chr4 (4-108)||(46714459-46714564)
chr4 (1-109)||(44343579-44343688)
chr4 (1-109)||(45787727-45787836)
chr4 (1-115)||(19660555-19660670)
chr4 (1-109)||(9517664-9517773)
chr4 (1-109)||(36131533-36131642)
chr4 (3-109)||(25852279-25852387)
chr4 (3-109)||(13584279-13584386)
chr4 (1-111)||(13550271-13550382)
chr4 (28-109)||(33992691-33992773)
chr4 (28-109)||(35674791-35674873)
chr4 (1-109)||(13873318-13873427)
chr4 (1-109)||(49287923-49288031)
chr4 (1-105)||(55961777-55961881)
chr4 (4-109)||(18875543-18875648)
chr4 (1-109)||(21387510-21387617)
chr4 (3-65)||(53787082-53787144)
chr4 (3-95)||(22488053-22488146)
chr4 (9-109)||(32942435-32942536)
chr4 (28-115)||(12500108-12500196)
chr4 (1-109)||(25969526-25969632)
chr4 (1-64)||(51535731-51535795)
chr4 (7-96)||(27574396-27574486)
chr4 (1-98)||(35229243-35229342)
chr4 (1-54)||(4064981-4065034)
chr4 (1-44)||(55158366-55158409)
chr4 (1-63)||(1985948-1986009)
chr4 (1-67)||(4585736-4585800)
chr4 (1-67)||(4912034-4912100)
chr4 (1-114)||(20527057-20527170)
chr4 (14-64)||(22625097-22625147)
chr4 (1-102)||(51595094-51595196)
chr4 (3-63)||(42508406-42508466)
chr4 (3-66)||(9646241-9646304)
chr4 (43-115)||(10125879-10125952)
chr4 (3-52)||(13017836-13017885)
chr4 (1-41)||(23639758-23639798)
chr4 (1-41)||(23645416-23645456)
[»] chr2 (45 HSPs)
chr2 (1-109)||(44946076-44946185)
chr2 (1-109)||(35171865-35171974)
chr2 (1-109)||(24196069-24196176)
chr2 (1-115)||(11941233-11941348)
chr2 (1-109)||(15038024-15038133)
chr2 (1-109)||(33827596-33827705)
chr2 (1-101)||(28668946-28669047)
chr2 (1-109)||(30466853-30466962)
chr2 (1-109)||(36242335-36242444)
chr2 (3-104)||(3943810-3943912)
chr2 (1-109)||(44976176-44976286)
chr2 (1-109)||(10582015-10582122)
chr2 (1-109)||(17324831-17324939)
chr2 (1-109)||(25293231-25293333)
chr2 (1-94)||(34516437-34516530)
chr2 (1-100)||(27269367-27269467)
chr2 (1-109)||(2140509-2140615)
chr2 (3-109)||(5394082-5394189)
chr2 (3-109)||(41329908-41330014)
chr2 (21-105)||(4567480-4567565)
chr2 (1-105)||(36390592-36390696)
chr2 (1-109)||(41314057-41314165)
chr2 (1-109)||(43374353-43374457)
chr2 (1-96)||(714148-714244)
chr2 (1-108)||(1191579-1191687)
chr2 (1-109)||(8258962-8259071)
chr2 (1-109)||(13266555-13266663)
chr2 (37-109)||(27290653-27290726)
chr2 (1-109)||(45271449-45271558)
chr2 (1-115)||(19054084-19054200)
chr2 (3-67)||(44610147-44610211)
chr2 (26-115)||(23787056-23787146)
chr2 (3-52)||(14486948-14486997)
chr2 (1-76)||(4769265-4769340)
chr2 (1-56)||(4852649-4852703)
chr2 (3-66)||(18708586-18708649)
chr2 (4-67)||(31778139-31778202)
chr2 (1-64)||(45132398-45132461)
chr2 (17-67)||(19849941-19849991)
chr2 (1-64)||(9400984-9401047)
chr2 (1-44)||(18976478-18976521)
chr2 (78-109)||(32845156-32845187)
chr2 (1-55)||(44929869-44929923)
chr2 (1-109)||(5608057-5608166)
chr2 (1-45)||(18692090-18692134)
[»] chr1 (44 HSPs)
chr1 (1-109)||(4621260-4621369)
chr1 (1-109)||(24122088-24122197)
chr1 (1-109)||(24674458-24674567)
chr1 (1-109)||(7766750-7766859)
chr1 (1-109)||(15059425-15059534)
chr1 (3-115)||(30677235-30677348)
chr1 (1-104)||(8254775-8254879)
chr1 (12-109)||(8077712-8077810)
chr1 (1-109)||(17935834-17935943)
chr1 (3-109)||(46607875-46607982)
chr1 (1-105)||(1378967-1379071)
chr1 (1-109)||(7197270-7197378)
chr1 (1-109)||(9500378-9500487)
chr1 (5-109)||(45859070-45859175)
chr1 (1-109)||(23734181-23734291)
chr1 (1-109)||(23741373-23741483)
chr1 (3-109)||(32729610-32729716)
chr1 (5-109)||(168266-168371)
chr1 (5-109)||(7578474-7578579)
chr1 (1-109)||(27454887-27454998)
chr1 (7-109)||(7946909-7947011)
chr1 (1-95)||(8779759-8779854)
chr1 (1-115)||(34778401-34778513)
chr1 (1-67)||(22909979-22910045)
chr1 (7-76)||(12876965-12877034)
chr1 (1-109)||(18646918-18647027)
chr1 (4-67)||(2537801-2537864)
chr1 (1-60)||(50202661-50202720)
chr1 (1-109)||(36155911-36156020)
chr1 (3-64)||(37351478-37351538)
chr1 (1-115)||(2272403-2272518)
chr1 (3-109)||(16899568-16899675)
chr1 (1-67)||(48699866-48699933)
chr1 (1-67)||(26513171-26513236)
chr1 (1-101)||(45331644-45331746)
chr1 (1-105)||(32930818-32930923)
chr1 (3-67)||(29057363-29057427)
chr1 (1-54)||(6776201-6776254)
chr1 (13-109)||(18533759-18533856)
chr1 (1-109)||(21726794-21726903)
chr1 (13-109)||(33905545-33905642)
chr1 (1-76)||(26820286-26820361)
chr1 (1-48)||(27159212-27159259)
chr1 (81-115)||(39964571-39964605)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-109)||(7332-7441)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-109)||(40390-40498)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-109)||(161874-161983)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-109)||(1079-1188)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-109)||(9322-9431)
scaffold0366 (4-105)||(12027-12128)
[»] scaffold0026 (1 HSPs)
scaffold0026 (3-109)||(97391-97498)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-109)||(52894-53003)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-105)||(32357-32462)
[»] scaffold1175 (1 HSPs)
scaffold1175 (4-76)||(2452-2524)
[»] scaffold0049 (1 HSPs)
scaffold0049 (3-67)||(66862-66926)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-109)||(41667-41776)
[»] scaffold0459 (1 HSPs)
scaffold0459 (4-105)||(10720-10821)
[»] scaffold0157 (1 HSPs)
scaffold0157 (28-115)||(20281-20369)
[»] scaffold0717 (1 HSPs)
scaffold0717 (21-109)||(1-90)


Alignment Details
Target: scaffold0328 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 13074 - 13414
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccaga 103  Q
    ||||||| ||||||| |||| |||||| ||| |||||||||||||||||||||    ||||||  |||||||  |||| |||||||||||||||||||||    
T  13074 actaatctgaggggatcaatcccaccgtccacttgcgggggccccgtttaaagt---agcaagctctgtatggacttaacccaccgaaattggcaccaga 13170  T
Q  104 gggaattaaaccactagatcaaccccaaatgggttacaatgggaataagttaagctttaaacggcttaatgaattaaaataaggctaaagattgttatta 203  Q
    ||||||  ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13171 gggaatcgaaccactaggtcaaccccaaatgggttacaatgagaataagttaagatttaaacggcttaatgaattaaaataaggctaaagattgttatta 13270  T
Q  204 ttaattacctctgattcaatttcctcatgaagaacagcaaatagttgaaaaccaagtgaatcaaatatgggttttctggaataaagctggtgtgcctcag 303  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13271 ttaattacctctgattcaatttcctcatgaagaactgcaaatagttgaaaaccaagtgaatcaaatatgggttttctggaataaagctggtgtgcctcag 13370  T
Q  304 ctctacacatgatgcacctgttttaaaattcaagggacataaat 347  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||    
T  13371 ctctacacatgatgcacctgttttcaaatacaagggaaataaat 13414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 15161 - 15050
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccag 102  Q
    ||||||||||||| ||||||| || ||||||| ||||||||| ||| |||||||||||||||||  ||| || | |||| |||||||||||| |||||||    
T  15161 gactaatccgaggagaccaatccc-ccgcccacttgcggggggcccatttaaagccagagcaagctctggatggacttaacccaccgaaattagcaccag 15063  T
Q  103 agggaattaaacc 115  Q
    |||||||| ||||    
T  15062 agggaattgaacc 15050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5105 - 5214
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  5105 atcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 5204  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  5205 cagagggaat 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2751449 - 2751340
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  2751449 atcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 2751350  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  2751349 cagagggaat 2751340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21835329 - 21835220
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  21835329 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 21835230  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  21835229 cagagggaat 21835220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22120066 - 22119957
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  22120066 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 22119967  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  22119966 cagagggaat 22119957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 40542933 - 40543042
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  40542933 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 40543032  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  40543033 cagagggaat 40543042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23092274 - 23092167
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  23092274 atcgactaatccgaggggaccaatcccaccgtccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 23092175  T
Q  100 cagaggga 107  Q
    ||||||||    
T  23092174 cagaggga 23092167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7275455 - 7275346
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  7275455 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 7275356  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  7275355 cagagggaat 7275346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29861848 - 29861739
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  29861848 atcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctgtatggacttagcccaccgaaattggcac 29861749  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  29861748 cagagggaat 29861739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7175885 - 7175994
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  7175885 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 7175984  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  7175985 cagagggaat 7175994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 17196973 - 17197082
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | |||||| |||||||||||||||    
T  17196973 atcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagctcaccgaaattggcac 17197072  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  17197073 cagagggaat 17197082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 654730 - 654836
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  654730 cgactaatccgaggggaccaatcccaccgcccacttgcggggg-cccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcacca 654828  T
Q  102 gagggaat 109  Q
    ||||||||    
T  654829 gagggaat 654836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 16374172 - 16374063
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||| | |||||| | |||| |||||||||||||||||    
T  16374172 atcgactaatccgaggggaccaatcccaccgtccatttgcgggggtcccgtttaaagccatagcaaattctgtatggacttaacccaccgaaattggcac 16374073  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  16374072 cagagggaat 16374063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18044285 - 18044176
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  18044285 atcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 18044186  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  18044185 aagagggaat 18044176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22703664 - 22703555
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||   ||||| | |||||||||||||||||| |||    
T  22703664 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctttgtatggacttagcccaccgaaattgacac 22703565  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  22703564 cagagggaat 22703555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2103232 - 2103124
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| |||||||||||||||||  |||||| | |||||||||||||||||||| |    
T  2103232 atcgactaatccgaggg-accaatcccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctc 2103134  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  2103133 cagagggaat 2103124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 10091366 - 10091257
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||| |||| |||||||||| |||||||| |||| |||||||||||||||||  |||||| | |||||||||||||||||||| |    
T  10091366 atcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctc 10091267  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  10091266 cagagggaat 10091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 11998027 - 11997918
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||   ||||| | ||||||| ||||||||||||||    
T  11998027 atcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagcaagctatgtatggacttagccaaccgaaattggcac 11997928  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  11997927 cagagggaat 11997918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 23012534 - 23012646
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccag 102  Q
    ||||||| ||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||||  |||||| | |||||||||||||||||||||| ||    
T  23012534 gactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggcactag 23012633  T
Q  103 agggaattaaacc 115  Q
    ||||||| |||||    
T  23012634 agggaatcaaacc 23012646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3851935 - 3851840
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||  || ||| | ||||||||||||||||||    
T  3851935 atcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctatatggacttagcccaccgaaattg 3851840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36772326 - 36772424
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggca 98  Q
    ||||||||||||||| |||| |||||||||||||| |  ||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||    
T  36772326 atcgactaatccgagaggactaattccaccgcccactcccgggggccccgtttaaagccagagcaagctctgtatgaacttagcccaccgaaattggca 36772424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 21217860 - 21217965
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccaga 103  Q
    ||||||||||||||| |||| |||||||||| ||| ||||| |||||||||||| ||||||||  |||||| | ||||||||||||||||||||| ||||    
T  21217860 actaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagctagagcaagctctgtatggacttagcccaccgaaattggcatcaga 21217959  T
Q  104 gggaat 109  Q
    ||||||    
T  21217960 gggaat 21217965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 42913540 - 42913637
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| | |||| | |||| |||| ||||||||||||||    
T  42913540 actaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagttccgtatggacttatcccatcgaaattggcacca 42913637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 9718012 - 9718119
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||| ||||| ||||||||||||||| |||||| | |||||||||||||||||||||||||  || ||| | ||||||||| |||||||| |||||    
T  9718012 cgactaattcgaggagaccaattccaccgctcatttgtgagggccccgtttaaagccagagcaagctctctatggacttagcccatcgaaattgacacca 9718111  T
Q  102 gagggaat 109  Q
    ||||||||    
T  9718112 gagggaat 9718119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 17212231 - 17212116
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||| | || |||| |||| ||||||| ||||||||||||   |||||| | ||||||||||||||||||||||    
T  17212231 atcgactaatccgaggggaccaatcccaccactcacttgcaggggtcccgttttaagccagagcaatctctgtatggacttagcccaccgaaattggcac 17212132  T
Q  100 cagagggaattaaacc 115  Q
    ||||| ||||| ||||    
T  17212131 cagagagaattgaacc 17212116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21373888 - 21373789
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||| | ||||||||  ||||| ||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  21373888 atcgactaatccgtgaggaccaatctcaccgtccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagcccaccgaaattggcac 21373789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 27009538 - 27009431
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgccca-tttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggca 98  Q
    ||||||||||  |||||||||||| |||||| ||| ||||| |||||||||||||||| |||||||||  |||||||  |||||||||||||||||||||    
T  27009538 atcgactaatttgaggggaccaatcccaccgtccactttgcaggggccccgtttaaagtcagagcaagctctgtatggacttagcccaccgaaattggca 27009439  T
Q  99 ccagaggg 106  Q
    ||||||||    
T  27009438 ccagaggg 27009431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 28951038 - 28950942
Alignment:
Q  12 cgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcaccagaggga 107  Q
    ||||||||||||| |||||||| | ||||| ||| |||||||||||||||||||||  || ||||  ||||||||||||||||||||||||||||||    
T  28951038 cgaggggaccaatcccaccgccgacttgcgagggacccgtttaaagccagagcaagctctatatgaacttagcccaccgaaattggcaccagaggga 28950942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 2344475 - 2344368
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||||||| ||||||| || ||||||||| |||||||||||||| |  |||  |||||| | ||||||||||| ||||||||||||    
T  2344475 cgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagccaaaaaaagctctgtatggacttagcccaccaaaattggcacca 2344376  T
Q  102 gagggaat 109  Q
    || |||||    
T  2344375 gaaggaat 2344368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9684004 - 9683893
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| ||||||||||||||| || | |||||||| ||| |||| |||||||||||||||||| |||  | |||| | ||||||||||||||||||||||    
T  9684004 atcgattaatccgaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcggtatggacttagcccaccgaaattggcac 9683905  T
Q  100 cagagggaatta 111  Q
     |||||||||||    
T  9683904 tagagggaatta 9683893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39145675 - 39145784
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgt--atgtcttagcccaccgaaattggca 98  Q
    |||||||||| ||||||||||||| |||||| ||| |||| |||| |||||||||||||||||||||  ||||   || |||||||||||||||||||||    
T  39145675 atcgactaattcgaggggaccaatcccaccgtccacttgcagggg-cccgtttaaagccagagcaagctctgttattgacttagcccaccgaaattggca 39145773  T
Q  99 ccagagggaat 109  Q
    ||| |||||||    
T  39145774 ccacagggaat 39145784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22638466 - 22638361
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcacc 100  Q
    |||||||||| ||||| || |||| |||||||||| |||||| ||||||||||||||||||||||||  ||| |   |||| |||||||||||| |||||    
T  22638466 atcgactaattcgaggagatcaatcccaccgcccacttgcggaggccccgtttaaagccagagcaagctctgaa---cttaacccaccgaaattagcacc 22638370  T
Q  101 agagggaat 109  Q
    |||||||||    
T  22638369 agagggaat 22638361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41907537 - 41907645
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| | |||||||||| ||||| |||| ||||||||||| ||||||||||||||||||   |||||| | |||||||||| |||||||||||    
T  41907537 atcgactaatctg-ggggaccaatcccaccacccacttgcgggggccacgtttaaagccagagcaacctctgtatggacttagcccactgaaattggcac 41907635  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  41907636 cagagagaat 41907645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19421409 - 19421306
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||| ||||||| |||||||||| ||| ||| ||||| ||||||| |||||||||  |||||| | ||||||||| |||||||| |||    
T  19421409 atcgactaatccgaggagaccaatcccaccgcccacttgtgggcgccccatttaaagtcagagcaagctctgtatggacttagcccatcgaaattgacac 19421310  T
Q  100 caga 103  Q
    ||||    
T  19421309 caga 19421306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31197768 - 31197693
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg 76  Q
    ||||||||||| |||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||  |||||||    
T  31197768 atcgactaatctgaggggaccaatcccaccgaccacttgcgggggccccgtttaaagcaagagcaagatctgtatg 31197693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27312330 - 27312221
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||| |||||||||| |||||  ||  |||||| | ||| || || ||||||||||||    
T  27312330 atcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagtcagaggtagctctgtatggacttggcacatcgaaattggcac 27312231  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  27312230 tagagggaat 27312221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31274091 - 31273983
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||||||||  ||| ||||| |||||| | ||||||||||||||||||||||  |||||| | |||||||| |||||||| || |    
T  31274091 atcgactaattcgaggggaccaatctcactgcccacttgcggag-ccccgtttaaagccagagcaagctctgtatggacttagcccgccgaaattagctc 31273993  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  31273992 cagagggaat 31273983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31712925 - 31712987
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagag 63  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||| |||| ||||||||||||    
T  31712925 atcgactaatccgaggggaccaatcccaccgcccacttgcgagggtcccgcttaaagccagag 31712987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28089997 - 28089888
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtac----tgtat-gtcttagcccaccgaaattg 95  Q
    ||||||||||||||||||||||||  || |||||| ||||||||| ||| |||||||||||||||||  |    ||||| | ||||||||||||||||||    
T  28089997 atcgactaatccgaggggaccaatctcatcgcccacttgcggggg-cccatttaaagccagagcaagctcactttgtatggacttagcccaccgaaattg 28089899  T
Q  96 gcaccagaggg 106  Q
     ||||||||||    
T  28089898 acaccagaggg 28089888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 28647144 - 28647038
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc-aagtactgta-tgtcttagcccaccgaaattggcacca 101  Q
    ||||||| |||||| |||||| |||||||||| ||| ||||||||||||  |||||||||| ||   ||||| || ||| ||||||||||||||||||||    
T  28647144 gactaattcgagggaaccaatcccaccgcccacttgtgggggccccgttataagccagagcaaaactctgtattgactt-gcccaccgaaattggcacca 28647046  T
Q  102 gagggaat 109  Q
    ||||||||    
T  28647045 gagggaat 28647038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25333581 - 25333519
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagag 63  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||| || |||||||| |||||    
T  25333581 atcgactaatccgaggggaccaatcccactgcccacttgcggggggcctgtttaaagtcagag 25333519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22643365 - 22643470
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| |||||||||||||| |||  ||||| ||| ||||| |||| |||||||||| |||||||||  |||||| | ||||||| |||||||||| ||     
T  22643365 atcgattaatccgaggggactaatcacaccggccacttgcgagggctccgtttaaagtcagagcaagctctgtatggacttagcctaccgaaattgacat 22643464  T
Q  100 cagagg 105  Q
    ||||||    
T  22643465 cagagg 22643470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 43785322 - 43785431
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||| |||||||||||  ||||| ||| |||||| ||||||||||||| |||||| |||  |||||| | ||||| |||| |||||| ||||    
T  43785322 atcgactaatccaaggggaccaatctcaccgtccacttgcggaggccccgtttaaaaccagagtaagctctgtatggacttagtccactgaaattagcac 43785421  T
Q  100 cagagggaat 109  Q
     || ||||||    
T  43785422 aagtgggaat 43785431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33137848 - 33137951
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||||||||| ||||||||| ||||  ||||||| |||||||| ||||| ||  |||||| | ||||||||||  |||||| |||    
T  33137848 atcgactaattcgaggggaccaatttcaccgcccacttgc-agggccccatttaaagctagagcgagctctgtatggacttagcccactaaaattgacac 33137946  T
Q  100 cagag 104  Q
    |||||    
T  33137947 cagag 33137951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27704179 - 27704079
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    ||||||||||| ||||||| ||||  |||| |||| ||||||||| ||  |||||||||| ||||||  || ||||  ||||||||||||||||||||||    
T  27704179 atcgactaatctgaggggatcaatcacaccacccacttgcgggggtcca-tttaaagccaaagcaagctctctatggacttagcccaccgaaattggcac 27704081  T
Q  100 ca 101  Q
    ||    
T  27704080 ca 27704079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 13332495 - 13332555
Alignment:
Q  50 gtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccagagggaat 109  Q
    |||||||||||||| |||  |||||||  |||||||||||||||||||| |||||||||||    
T  13332495 gtttaaagccagagtaagctctgtatggacttagcccaccgaaattggctccagagggaat 13332555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 23330765 - 23330869
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa-gtactgtatgtcttagcccaccgaaattggcaccag 102  Q
    |||||||  ||||||||||||   |||||||| |||||| || ||||||| |||||||||||| |  |||||||   | ||||||||||||||||||| |    
T  23330765 gactaatttgaggggaccaatcttaccgcccacttgcggaggtcccgttttaagccagagcaaagctctgtatggacttgcccaccgaaattggcaccgg 23330864  T
Q  103 aggga 107  Q
    |||||    
T  23330865 aggga 23330869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25102832 - 25102895
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagca 65  Q
    |||||||||||||| || |||||| |||||| | | |||||||||||| ||||||||||||||||    
T  25102832 atcgactaatccgaaggaaccaatcccaccgtc-acttgcgggggccctgtttaaagccagagca 25102895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 32849769 - 32849654
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| |||||||||||| |||| ||||| ||  ||| | ||| |||||||||||||||||  | || | | ||||||||||| ||||||  ||    
T  32849769 atcgactaatctgaggggaccaatcccactgcccacttatgggagtcccatttaaagccagagcaagctcagtgtggacttagcccaccaaaattgagac 32849670  T
Q  100 cagagggaattaaacc 115  Q
     ||||||||| |||||    
T  32849669 tagagggaatcaaacc 32849654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 35476517 - 35476454
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    |||||||||| ||| ||||||||||||||  ||||||| |||| ||||||  ||||||||||||    
T  35476517 cgactaatccaaggagaccaattccaccggtcatttgcaggggtcccgttctaagccagagcaa 35476454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 40332243 - 40332193
Alignment:
Q  9 atccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagcc 59  Q
    |||||||||||||||| |||||||||| ||| || |||||||| |||||||    
T  40332243 atccgaggggaccaatcccaccgcccacttgtggaggccccgtctaaagcc 40332193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 21574127 - 21574176
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtt 52  Q
    ||||||||||||||||||||||  ||||||| | ||| ||||||||||||    
T  21574127 cgactaatccgaggggaccaatctcaccgcctacttgtgggggccccgtt 21574176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47541561 - 47541496
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    |||||||||||  |||||||||||||||| | ||| ||||||||| ||||||  |||||| |||||    
T  47541561 atcgactaatctaaggggaccaattccactgtccacttgcggggggcccgttctaagccaaagcaa 47541496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 6491744 - 6491676
Alignment:
Q  42 ggggccccgtttaaagccagagcaagtactgtatgtctt-agcccaccgaaattggcaccagagggaat 109  Q
    ||||| ||||||||||||| ||||||  |||||||  || |||||| |||||||| |||||||||||||    
T  6491744 ggggcaccgtttaaagccaaagcaagctctgtatgaatttagcccatcgaaattgacaccagagggaat 6491676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8943424 - 8943500
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtatg 76  Q
    |||||||||| | |||||||||||  ||||||||| |||| ||||| |||||||||| ||||| ||||  |||||||    
T  8943424 atcgactaattcaaggggaccaatcacaccgcccacttgcgggggggcccgtttaaaaccagaccaagctctgtatg 8943500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 14199730 - 14199798
Alignment:
Q  42 ggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    |||||||||||||||| |||||||||  || ||| | ||||||||||| |||||||||  |||||||||    
T  14199730 ggggccccgtttaaaggcagagcaagctctatatagacttagcccaccaaaattggcattagagggaat 14199798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 22299946 - 22299918
Alignment:
Q  81 agcccaccgaaattggcaccagagggaat 109  Q
    |||||||||||||||||||||||||||||    
T  22299946 agcccaccgaaattggcaccagagggaat 22299918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 22696415 - 22696383
Alignment:
Q  83 cccaccgaaattggcaccagagggaattaaacc 115  Q
    ||||||||||||||||||||||||||| |||||    
T  22696415 cccaccgaaattggcaccagagggaatcaaacc 22696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15360121 - 15360230
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  15360121 atcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 15360220  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  15360221 cagagggaat 15360230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 654169 - 654278
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  654169 atcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 654268  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  654269 cagagggaat 654278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 11449045 - 11448936
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  11449045 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 11448946  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  11448945 cagagagaat 11448936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12390599 - 12390490
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  12390599 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 12390500  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  12390499 cagagggaat 12390490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34147520 - 34147411
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  34147520 atcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 34147421  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  34147420 cagagggaat 34147411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34160136 - 34160027
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  34160136 atcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 34160037  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  34160036 cagagggaat 34160027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3222659 - 3222767
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||||  |||||| | ||||||||||||||||||||||    
T  3222659 atcgactaatccgaggggaccaatcccaccgcccacttgc-ggggccccgtttaaagacagagcaagctctgtatggacttagcccaccgaaattggcac 3222757  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  3222758 cagagggaat 3222767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9239149 - 9239040
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||||  || ||| | |||| |||||||||||||||||    
T  9239149 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaagctctatatggacttaacccaccgaaattggcac 9239050  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  9239049 cagagggaat 9239040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1345109 - 1345000
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||||| |||||||||||||||||||||   ||||| | |||||||||| |||||||||||    
T  1345109 atcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagcaagctttgtatggacttagcccactgaaattggcac 1345010  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  1345009 cagagggaat 1345000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21148534 - 21148642
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||||  |||||| | ||||||||| ||||||||||||    
T  21148534 atcgactaatccgaggggaccaatcccaccgcccacttgc-ggggccccgtttaaagtcagagcaagctctgtatggacttagcccatcgaaattggcac 21148632  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  21148633 tagagggaat 21148642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21982344 - 21982444
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||| |||||||||||    
T  21982344 atcgactaatccgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccactgaaattggcac 21982442  T
Q  100 ca 101  Q
    ||    
T  21982443 ca 21982444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 17081088 - 17081191
Alignment:
Q  12 cgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaatt 110  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||||  |||||| | |||||||||||||||||| |||||||||||||     
T  17081088 cgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctctgtatggacttagcccaccgaaattgacaccagagggaatc 17081187  T
Q  111 aaac 114  Q
    ||||    
T  17081188 aaac 17081191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 28672241 - 28672132
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||| | ||||  |||||| | ||||||||||| |||||| |||    
T  28672241 atcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaagctctgtatggacttagcccaccaaaattgacac 28672142  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  28672141 cagagggaat 28672132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5360094 - 5360203
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||||||| ||| |||||  |||||||||| |||||||||  |||||| | |||||||||||||||||||||     
T  5360094 atcgactaattcgaggggaccaatcccaccgcccacttgtgggggttccgtttaaagtcagagcaagctctgtatggacttagcccaccgaaattggcat 5360193  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  5360194 tagagggaat 5360203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9690661 - 9690756
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    ||||||||||||||| |||||||| |||||| ||| ||| | |||||||||||||||||||||||||  |||||| | ||||||||||||||||||    
T  9690661 atcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattg 9690756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11007339 - 11007244
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||| ||||||| ||||||||   ||||| | ||||||||||||||||||    
T  11007339 atcgactaatccgagggggccaatcccaccgcccacttgcgggggccccgcttaaagctagagcaagctttgtatggacttagcccaccgaaattg 11007244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 9844112 - 9844007
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||| |||||||||  ||||||||| ||| |||||||||||||||||||||| ||||  |||||| | |||| |||||| |||||| |||    
T  9844112 atcgactaatccgaagggaccaatctcaccgcccacttgagggggccccgtttaaagccagaacaagctctgtatggacttaacccaccaaaattgacac 9844013  T
Q  100 cagagg 105  Q
    ||||||    
T  9844012 cagagg 9844007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9208426 - 9208317
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa-gtactgtatgtcttagcccaccgaaattggcac 99  Q
    |||||||| || |||| ||||||| |||||||||| ||||||||||||| |||||||||| ||||| |  |||||||   | ||||||||||||||||||    
T  9208426 atcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaaggctctgtatggacttgcccaccgaaattggcac 9208327  T
Q  100 cagagggaat 109  Q
    ||| ||||||    
T  9208326 cagggggaat 9208317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 33499646 - 33499540
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc-aagtactgtatgtcttagcccaccgaaattggcaccag 102  Q
    ||||||||||||||||||||| |||||||||| ||| || || ||| |||||||||| ||| |||   ||||||   |||||||||||||||| ||||||    
T  33499646 gactaatccgaggggaccaatcccaccgcccacttgtggagggcccatttaaagccaaagcaaagatttgtatggactagcccaccgaaattgacaccag 33499547  T
Q  103 agggaat 109  Q
    |||||||    
T  33499546 agggaat 33499540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15730518 - 15730593
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg 76  Q
    |||||||||||||||| ||||||| ||||||||||  || ||||||| |||||||||||||| ||||  |||||||    
T  15730518 atcgactaatccgaggtgaccaatcccaccgcccacgtgtgggggccacgtttaaagccagaacaagctctgtatg 15730593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 17149481 - 17149588
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa-gtactgtatgtcttagcccaccgaaattggcacca 101  Q
    |||||||| ||||||||||||| ||||||  || ||||||||||||| |||||||||| ||||| |  |||||||   | ||| ||||||||| ||||||    
T  17149481 cgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaaggctctgtatggacttgccaaccgaaattagcacca 17149580  T
Q  102 gagggaat 109  Q
    ||||||||    
T  17149581 gagggaat 17149588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 10377888 - 10377774
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttg-cgggggccccgtttaaagccagagc-aagtactgtatgtcttagcccaccgaaattggcacc 100  Q
    |||||| ||||||||||||||| |||||||||| |||  ||||||||||||| ||| |||||| |||   ||||||   | |||||||||||||||||||    
T  10377888 cgactactccgaggggaccaatgccaccgcccacttgtggggggccccgttttaagtcagagcaaagctatgtatggacttgcccaccgaaattggcacc 10377789  T
Q  101 agagggaattaaacc 115  Q
    | |||||||| ||||    
T  10377788 atagggaattgaacc 10377774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 11841074 - 11840966
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||| ||| |||||| ||| ||  |||| ||||||||||| ||| ||||||   ||||||  |||| |||||||||||||||||    
T  11841074 atcgactaattcgaggggactaatcccaccgtccacttatgggg-ccccgtttaaaaccaaagcaagctttgtatggacttaacccaccgaaattggcac 11840976  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  11840975 cagagggaat 11840966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14213056 - 14212999
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagc 58  Q
    ||||||||||||||| |||||||| ||||| |||| |||||||| |||||||||||||    
T  14213056 atcgactaatccgagtggaccaatcccaccacccacttgcggggcccccgtttaaagc 14212999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 12591766 - 12591702
Alignment:
Q  46 ccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccagagggaat 109  Q
    ||||||||||||||||||||||  |||||||  |||||||||| ||||||||||| |||||||||    
T  12591766 ccccgtttaaagccagagcaagctctgtatggacttagcccactgaaattggcacgagagggaat 12591702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33718492 - 33718547
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaa 56  Q
    ||||||||||||||||||| |||| |||||| ||| |||| | |||||||||||||    
T  33718492 atcgactaatccgaggggatcaatcccaccgtccacttgcagaggccccgtttaaa 33718547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 28968078 - 28968160
Alignment:
Q  14 aggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    ||||||||||| |||||||| |||| |  |||| |||||||||| ||||| |||| |||||| | |||| |||||||||||||    
T  28968078 aggggaccaatcccaccgcctatttacatgggcaccgtttaaaggcagagtaagttctgtatggacttaacccaccgaaattg 28968160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 13753335 - 13753299
Alignment:
Q  79 ttagcccaccgaaattggcaccagagggaattaaacc 115  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  13753335 ttagcccaccgaaattggcaccagagagaattgaacc 13753299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21903642 - 21903706
Alignment:
Q  1 atcgactaatccgagggg-accaattccaccgcccatttgcgggggccccgtttaaagccagagc 64  Q
    ||||||||||| |||||| |||| | |||||||||| |||| || ||||| ||||||||||||||    
T  21903642 atcgactaatctgagggggaccattcccaccgcccacttgctggtgccccatttaaagccagagc 21903706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 32596247 - 32596211
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgc 40  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  32596247 gactaatccgaggggaccaatcccaccgcccacttgc 32596211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 7e-40; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8484684 - 8484799
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||    
T  8484684 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgaacttagcccaccgaaattggcac 8484783  T
Q  100 cagagggaattaaacc 115  Q
    |||||||||| |||||    
T  8484784 cagagggaatcaaacc 8484799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15641128 - 15641237
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||| |    
T  15641128 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggctc 15641227  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  15641228 cagagggaat 15641237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27498754 - 27498863
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||   ||||| | ||||||||||||||||||||||    
T  27498754 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctatgtatggacttagcccaccgaaattggcac 27498853  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  27498854 cagagggaat 27498863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 32059465 - 32059572
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  32059465 cgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcacca 32059564  T
Q  102 gagggaat 109  Q
    || |||||    
T  32059565 gaaggaat 32059572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19456234 - 19456340
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  19456234 atcgactaatccgaggggaccaatcccaccgcccacttgc-ggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 19456332  T
Q  100 cagaggga 107  Q
    ||||||||    
T  19456333 cagaggga 19456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11926524 - 11926634
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||    
T  11926524 atcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggca 11926623  T
Q  99 ccagagggaat 109  Q
    |||||||||||    
T  11926624 ccagagggaat 11926634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18207381 - 18207272
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||  |||||| | ||||||||||||||||||||||    
T  18207381 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaacaagctctgtatggacttagcccaccgaaattggcac 18207282  T
Q  100 cagagggaat 109  Q
    | ||||||||    
T  18207281 cggagggaat 18207272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38684381 - 38684273
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  38684381 atcgactaatccgaggggaccaatcccaccgctcacttgcggggg-cccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 38684283  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  38684282 cagagggaat 38684273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7085649 - 7085758
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||| |||||||||  |||||| | |||||||||||||||||| |||    
T  7085649 atcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagtcagagcaagctctgtatggacttagcccaccgaaattgacac 7085748  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  7085749 tagagggaat 7085758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 35425187 - 35425082
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  35425187 atcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcgagctctgtatggacttagcccaccgaaattggcac 35425088  T
Q  100 cagagg 105  Q
     |||||    
T  35425087 tagagg 35425082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 30485999 - 30485893
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccag 102  Q
    ||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||  |||||| | |||||||||||||||||| ||||||    
T  30485999 gactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagcaagctctgtatggacttagcccaccgaaattgacaccag 30485900  T
Q  103 agggaat 109  Q
    || ||||    
T  30485899 agtgaat 30485893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 4603949 - 4603842
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||| ||  |||||| | ||||||||| ||||||||||||||    
T  4603949 cgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagccagagcgagctctgtatggacttagcccatcgaaattggcacca 4603850  T
Q  102 gagggaat 109  Q
    || |||||    
T  4603849 gaaggaat 4603842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22392862 - 22392796
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22392862 atcgactaatctgaggggaccaattccaccgcccacttgcgggggccccgtttaaagccagagcaag 22392796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 23270549 - 23270643
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||  |||||| | |||||||||||||||||||||    
T  23270549 actaatccgaggggaccaatcccaccgtccatttgcgggggctccgtttaaagccaaagcaagctctgtatggacttagcccaccgaaattggca 23270643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33709526 - 33709633
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||     |||||| | ||||||||||||||||||||||    
T  33709526 atcgactaatccgaggggaccaatcccaccgcccacttgtgggggtcccgtttaaagccagagc--tctctgtatggacttagcccaccgaaattggcac 33709623  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  33709624 cagagggaat 33709633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 10869590 - 10869697
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||| |||||||||||||||||  | || | | ||||||||||||||||||| ||||    
T  10869590 cgactaatccgaggggaccaatcccaccgcccacttgcggaggccccatttaaagccagagcaagctcagtgtggacttagcccaccgaaattggaacca 10869689  T
Q  102 gagggaat 109  Q
    || |||||    
T  10869690 gatggaat 10869697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5049310 - 5049201
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||| ||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||  |||||||  ||||| ||| ||||||||| ||    
T  5049310 atcgactaattcgatgggaccaatcccaccgtccatttgcggggg-cccgtttaaagccagagcaagctctgtatgaacttagaccatcgaaattggtac 5049212  T
Q  100 cagagggaatt 110  Q
    |||||||||||    
T  5049211 cagagggaatt 5049201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 11464931 - 11465035
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| ||||| |||| |||| |||||||||||||||||||||| |||  |||||||  ||||||||||| ||||||||||    
T  11464931 atcgactaattcgaggggaccaatcccaccacccacttgc-ggggccccgtttaaagccagagtaagctctgtatgaacttagcccaccaaaattggcac 11465029  T
Q  100 cagagg 105  Q
    ||||||    
T  11465030 cagagg 11465035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34310316 - 34310207
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| |||| ||||||||||||| |||||| ||| ||  ||||| |||||||||||||||||||||  |||||| | ||||||||||| ||||||||||    
T  34310316 atcgattaattcgaggggaccaatcccaccgtccacttatgggggtcccgtttaaagccagagcaagctctgtatggacttagcccaccaaaattggcac 34310217  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  34310216 cagagggaat 34310207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6014303 - 6014406
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||| |||  ||||||||| ||||| || ||||||||||||||||||||||  |||||| | |||| |||||||||||||||||    
T  6014303 atcgactaattcgaggggactaatctcaccgcccacttgcgtggaccccgtttaaagccagagcaagctctgtatggacttaacccaccgaaattggcac 6014402  T
Q  100 caga 103  Q
    ||||    
T  6014403 caga 6014406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 26009289 - 26009396
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||| ||| ||||  |||| ||||||||||||||||||||||||||| |||  ||| || | |||||||||| |||||||||||||    
T  26009289 cgactaatccgaggggactaatcccactacccacttgcgggggccccgtttaaagccagagtaagctctgcatggacttagcccactgaaattggcacca 26009388  T
Q  102 gagggaat 109  Q
     |||||||    
T  26009389 aagggaat 26009396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 31287971 - 31288078
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||| || ||||||   ||||| | |||| |||||||||||||||||||    
T  31287971 cgactaattcgaggagaccaatcccaccgcccacttgcgggggccccgtttaaagtcaaagcaagctttgtatggacttaacccaccgaaattggcacca 31288070  T
Q  102 gagggaat 109  Q
     |||||||    
T  31288071 aagggaat 31288078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27487577 - 27487679
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||||||||||||||||| |||||||||| ||||  ||| ||||||||||||| ||||||||  |||||| | ||||| |||||||||||||||    
T  27487577 atcgactaatccgaggggaccaatcccaccgcccacttgcaagggcccccgtttaaagctagagcaagctctgtatggacttagtccaccgaaattggca 27487676  T
Q  99 cca 101  Q
    |||    
T  27487677 cca 27487679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 19145439 - 19145543
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa-gtactgtatgtcttagcccaccgaaattggcaccaga 103  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||  |||||||||||||||| |  |||||||   | ||||||||||||||||||||||    
T  19145439 actaatccgaggggaccaatcccaccgcccacttgcgggggacca-tttaaagccagagcaaagctctgtatggacttgcccaccgaaattggcaccaga 19145537  T
Q  104 gggaat 109  Q
    ||||||    
T  19145538 gggaat 19145543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 34049981 - 34049897
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccacc 88  Q
    |||||||||||||||||||| | |||| ||| |||||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  34049981 actaatccgaggggaccaatcctaccgaccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccacc 34049897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22693109 - 22693054
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaa 56  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22693109 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaa 22693054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37495228 - 37495112
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcggg-------ggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaa 92  Q
    |||||||||||||||||||||||| |||||||||| |||||||       ||   |||||||||||||||||||  |||||||  ||||||||||| |||    
T  37495228 atcgactaatccgaggggaccaatcccaccgcccacttgcgggcgggggggggggcgtttaaagccagagcaagctctgtatggacttagcccaccaaaa 37495129  T
Q  93 ttggcaccagagggaat 109  Q
    |||||||||||||||||    
T  37495128 ttggcaccagagggaat 37495112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41351127 - 41351192
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    |||||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||    
T  41351127 atcgactaatccgaggggaccaatcccaccgcccacttgc-ggagccccgtttaaagccagagcaag 41351192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13038478 - 13038586
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||| |||| |||||||||| |||||||||||||||||||||||| | |  |  |||||||  ||||||||| | ||||||||||    
T  13038478 atcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccata-cttgctctgtatgaacttagcccatcaaaattggcac 13038576  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  13038577 cagagggaat 13038586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13108473 - 13108581
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||| |||| |  |  |||||||  ||||||||| | ||||||||||    
T  13108473 atcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaaggcaga-cttgctctgtatgaacttagcccatcaaaattggcac 13108571  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  13108572 cagagggaat 13108581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 9659338 - 9659429
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    |||||||||| ||||||||| |||||| ||| ||||||||| ||| |||||||||||||||||   ||||| | ||||||||||||||||||    
T  9659338 actaatccgaagggaccaatcccaccgtccacttgcggggggcccatttaaagccagagcaagctgtgtatggacttagcccaccgaaattg 9659429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 12398497 - 12398580
Alignment:
Q  27 caccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcaccagagggaat 109  Q
    ||||| ||||||||||||||||| |||||||||||||||||  |||||||  ||||| |||||||||||| ||||| |||||||    
T  12398497 caccgtccatttgcgggggccccatttaaagccagagcaagctctgtatgaacttaggccaccgaaattgacaccatagggaat 12398580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 15971151 - 15971250
Alignment:
Q  7 taatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagg 105  Q
    ||||||||||||| ||||  ||||||||| ||||||||| ||||||||||| |||||||||   ||||| | |||||||||||||||||| || ||||||    
T  15971151 taatccgaggggatcaatctcaccgcccacttgcgggggtcccgtttaaagtcagagcaagctatgtatggacttagcccaccgaaattgacatcagagg 15971250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21236385 - 21236447
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagag 63  Q
    ||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||| |||||    
T  21236385 atcgactaatctgaggggactaatcccaccgcccacttgcgggggccccgtttaaagtcagag 21236447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10399948 - 10399832
Alignment:
Q  1 atcgactaatccgaggg-gaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||| |||||| ||||||| |||||| ||| || |||||||||||||||||| ||||||| |  | |||| | ||||||||| ||||||||||     
T  10399948 atcgactaattcgagggtgaccaatcccaccgtccacttacgggggccccgtttaaagtcagagcatgctccgtatggacttagcccatcgaaattggcg 10399849  T
Q  99 ccagagggaattaaacc 115  Q
    |||||| |||| |||||    
T  10399848 ccagagagaatcaaacc 10399832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13659268 - 13659335
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagt 68  Q
    ||||| ||||||||||||| |||| |||||||||| ||||||||| ||||||||||| || |||||||    
T  13659268 atcgattaatccgaggggatcaatcccaccgcccacttgcgggggtcccgtttaaagtcaaagcaagt 13659335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 42193657 - 42193554
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||| |||||||  |||||||||| ||||||||   || |||||||||| |||||   |||||| | |||||||||||||||||||||     
T  42193657 atcgactaatccgagaggaccaaccccaccgcccacttgcgggg--tccatttaaagccaaagcaaactctgtatagacttagcccaccgaaattggcat 42193560  T
Q  100 cagagg 105  Q
    ||||||    
T  42193559 cagagg 42193554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 25587066 - 25587001
Alignment:
Q  41 gggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccagagg 105  Q
    ||||| || ||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||    
T  25587066 gggggtcctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccagagg 25587001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 15931207 - 15931124
Alignment:
Q  26 ccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccagagggaat 109  Q
    |||||||||| ||||| | |||| |||||||||||||||| |  |||||||  ||||||| ||||||||||||||||||||||||    
T  15931207 ccaccgcccacttgcgagagccctgtttaaagccagagcaggctctgtatggacttagcc-accgaaattggcaccagagggaat 15931124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38631002 - 38631048
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggcc 47  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||    
T  38631002 atcgattaatccgaggggaccaatcccaccgcccacttgcgggggcc 38631048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5067435 - 5067392
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggg 44  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||    
T  5067435 atcgactaatcagaggggaccaatcccaccgcccacttgcgggg 5067392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 15485316 - 15485375
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccaga 62  Q
    |||||||||||||||| ||||| |||||  ||| |||||||| |||| ||||||||||||    
T  15485316 cgactaatccgaggggtccaatcccaccatccacttgcggggaccccatttaaagccaga 15485375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 31206415 - 31206301
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagca-agtactgtat-gtcttagcccaccgaaattggcacc 100  Q
    |||||||||||||| | ||||| |||||| ||| ||| ||||| ||| |||||||| |||||| ||  |||||| | ||||| |||  ||||||||||||    
T  31206415 cgactaatccgaggagtccaatcccaccgtccacttgtgggggtcccatttaaagcaagagcatagctctgtatggacttaggccaatgaaattggcacc 31206316  T
Q  101 agagggaattaaacc 115  Q
    || |||||| |||||    
T  31206315 agggggaataaaacc 31206301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36954992 - 36954883
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    ||||||||||  |||||||| ||| |||| | ||| ||||||||| ||| |||||||||| |||||   |||||||  |||||| | |||||||| | ||    
T  36954992 atcgactaatatgaggggactaatcccacagtccacttgcggggggcccatttaaagccaaagcaaactctgtatggacttagcacgccgaaattagaac 36954893  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  36954892 cagagggaat 36954883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 24158191 - 24158251
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagag 63  Q
    ||||||||| ||||||||||||  ||||||||| |||| | |||||||||  |||||||||    
T  24158191 cgactaatctgaggggaccaatctcaccgcccacttgcagaggccccgttctaagccagag 24158251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3734646 - 3734755
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  3734646 atcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 3734745  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  3734746 cagagggaat 3734755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4718823 - 4718714
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  4718823 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 4718724  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  4718723 cagagggaat 4718714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15259429 - 15259538
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  15259429 atcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 15259528  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  15259529 cagagggaat 15259538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21603408 - 21603299
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  21603408 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgggcttagcccaccgaaattggcac 21603309  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  21603308 catagggaat 21603299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34237678 - 34237787
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  34237678 atcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 34237777  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  34237778 cagagggaat 34237787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 39349434 - 39349325
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  39349434 atcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 39349335  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  39349334 cagagggaat 39349325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2618364 - 2618255
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||  |||||| | |||||||||| |||||||||||    
T  2618364 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctgtatggacttagcccactgaaattggcac 2618265  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  2618264 cagagggaat 2618255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8765549 - 8765658
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||  |||||| | ||||||||| ||||||||||||    
T  8765549 atcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatggacttagcccatcgaaattggcac 8765648  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  8765649 cagagggaat 8765658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 28193652 - 28193543
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||  ||||||||||||||||||||||||||  |||||| | |||| |||||||||||||||||    
T  28193652 atcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagcaagctctgtatggacttaacccaccgaaattggcac 28193553  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  28193552 cagagggaat 28193543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 32879457 - 32879348
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| | |||||||||  |||||||  ||||||||||||||||||||||    
T  32879457 atcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaatgtcagagcaagctctgtatgaacttagcccaccgaaattggcac 32879358  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  32879357 cagagggaat 32879348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 4698746 - 4698855
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||||||||| ||  || | |||||||||||||||||| |||    
T  4698746 atcgactaatccgaggggaccaatcccaccgctcacttgcgggggctccgtttaaagccagagcaagttcttcatggacttagcccaccgaaattgacac 4698845  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  4698846 cagagggaat 4698855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6953031 - 6953139
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||| |||||| |||||||| | |||||||||||| ||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  6953031 atcgactaatccgaggg-accaatcccaccgccaacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 6953129  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  6953130 cagagggaat 6953139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20306086 - 20305977
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||||| | ||||||||| ||||||||||||    
T  20306086 atcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatggacttagcccatcgaaattggcac 20305987  T
Q  100 cagagggaat 109  Q
    |||| |||||    
T  20305986 cagaaggaat 20305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21092719 - 21092610
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||||| | ||||||||| ||||||||||||    
T  21092719 atcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatggacttagcccatcgaaattggcac 21092620  T
Q  100 cagagggaat 109  Q
    |||| |||||    
T  21092619 cagaaggaat 21092610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 25248525 - 25248418
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcacc 100  Q
    |||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||   ||||||| ||||||| |||||||||| ||||    
T  25248525 atcgactaatccgaggggaccaatcccaccgcccacttgcgagggccc-gtttaaagccagagcaaactctgtatgacttagcctaccgaaattgacacc 25248427  T
Q  101 agagggaat 109  Q
    |||||||||    
T  25248426 agagggaat 25248418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42328182 - 42328067
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| ||| || ||| ||| |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||     
T  42328182 atcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaa 42328083  T
Q  100 cagagggaattaaacc 115  Q
    |||||||||| |||||    
T  42328082 cagagggaatcaaacc 42328067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19471788 - 19471672
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||| ||||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||  |||||| | |||||| |||| |||||||||    
T  19471788 atcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagctcaccaaaattggca 19471689  T
Q  99 ccagagggaattaaacc 115  Q
    ||||||||||| |||||    
T  19471688 ccagagggaatcaaacc 19471672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19542712 - 19542596
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||| ||||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||  |||||| | |||||| |||| |||||||||    
T  19542712 atcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagctcaccaaaattggca 19542613  T
Q  99 ccagagggaattaaacc 115  Q
    ||||||||||| |||||    
T  19542612 ccagagggaatcaaacc 19542596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 19589984 - 19590100
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||| ||||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||  |||||| | |||||| |||| |||||||||    
T  19589984 atcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagctcaccaaaattggca 19590083  T
Q  99 ccagagggaattaaacc 115  Q
    ||||||||||| |||||    
T  19590084 ccagagggaatcaaacc 19590100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2639434 - 2639499
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  2639434 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 2639499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 14633132 - 14633023
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||| ||||||||||| |||||||||| ||| ||  || ||||| ||||||||||||||  |||||| | ||||||||||||||||||||||    
T  14633132 atcgactaatccaaggggaccaatcccaccgcccacttgtggacgctccgttcaaagccagagcaagctctgtatagacttagcccaccgaaattggcac 14633033  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  14633032 cagagggaat 14633023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34610710 - 34610819
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||||| |||||||| ||||| ||| | |||||||||||||||||||  |||||| | ||||| |||||||||||||||     
T  34610710 atcgactaattcgaggggaccaattctaccgcccacttgcgaggggctcgtttaaagccagagcaagctctgtatagacttagaccaccgaaattggcat 34610809  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  34610810 cagagggaat 34610819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 42643145 - 42643250
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccaga 103  Q
    |||||| ||||||||||||| |||||||||| |||||||| |||||||| ||| |||||||||  |||||| | |||||||||||||||||||||| |||    
T  42643145 actaatgcgaggggaccaatcccaccgcccacttgcggggcccccgtttcaagacagagcaagctctgtatggacttagcccaccgaaattggcactaga 42643244  T
Q  104 gggaat 109  Q
    ||||||    
T  42643245 gggaat 42643250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 18128689 - 18128582
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa-gtactgtatgtcttagcccaccgaaattggcacca 101  Q
    ||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||| |  || ||||  || ||||||||||||||||||||    
T  18128689 cgactaatctgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaaagctctttatggattcgcccaccgaaattggcacca 18128590  T
Q  102 gagggaat 109  Q
    ||| ||||    
T  18128589 gagagaat 18128582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 264423 - 264531
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||| ||||  ||||||||||||| ||||| |||||||||||||||||||||   ||||| | ||||||||||||||||||||||    
T  264423 atcgactaattcgaggggatcaatctcaccgcccatttgtggggg-cccgtttaaagccagagcaagctatgtatagacttagcccaccgaaattggcac 264521  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  264522 tagagggaat 264531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 651498 - 651390
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||| ||||  ||||||||||||| |||||||| ||||||||||||||||||   ||||| | ||||||||||||||||||||||    
T  651498 atcgactaattcgaggggatcaatctcaccgcccatttgtgggggccc-gtttaaagccagagcaagctatgtatagacttagcccaccgaaattggcac 651400  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  651399 tagagggaat 651390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 837233 - 837125
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||| ||||  ||||||||||||| |||||||| ||||||||||||||||||   ||||| | ||||||||||||||||||||||    
T  837233 atcgactaattcgaggggatcaatctcaccgcccatttgtgggggccc-gtttaaagccagagcaagctatgtatagacttagcccaccgaaattggcac 837135  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  837134 tagagggaat 837125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 326
Target Start/End: Original strand, 27336812 - 27336929
Alignment:
Q  209 tacctctgattcaatttcctcatgaagaacagcaaatagttgaaaaccaagtgaatcaaatatgggttttctggaataaagctggtgtgcctcagctcta 308  Q
    ||||||||| || || | |||||||| |||| ||||||||||||  ||||||| ||||||||||||||| |||||  | |||| ||||||||| |||||     
T  27336812 tacctctgactctatgtgctcatgaacaacaacaaatagttgaaccccaagtgcatcaaatatgggtttcctggagaagagcttgtgtgcctctgctctg 27336911  T
Q  309 cacatgatgcacctgttt 326  Q
    ||||||||||||||||||    
T  27336912 cacatgatgcacctgttt 27336929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 29176959 - 29176842
Alignment:
Q  209 tacctctgattcaatttcctcatgaagaacagcaaatagttgaaaaccaagtgaatcaaatatgggttttctggaataaagctggtgtgcctcagctcta 308  Q
    ||||||||| || || | |||||||| |||| ||||||||||||  ||||||| ||||||||||||||| |||||  | |||| ||||||||| |||||     
T  29176959 tacctctgactctatgtgctcatgaacaacaacaaatagttgaaccccaagtgcatcaaatatgggtttcctggagaagagcttgtgtgcctctgctctg 29176860  T
Q  309 cacatgatgcacctgttt 326  Q
    ||||||||||||||||||    
T  29176859 cacatgatgcacctgttt 29176842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27746358 - 27746467
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgccc-atttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggca 98  Q
    |||||||||||||||||||| ||||||| ||||| | ||| |||| |||| |||||||||||||||||  |||||||  |||||||||||||||||||||    
T  27746358 atcgactaatccgaggggactaattccatcgccccacttgtgggg-ccccttttaaagccagagcaagctctgtatggacttagcccaccgaaattggca 27746456  T
Q  99 ccagagggaat 109  Q
    ||| |||||||    
T  27746457 ccaaagggaat 27746467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 28964210 - 28964102
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||||||||   ||  | |||| | ||||||||||||||||||||||    
T  28964210 atcgactaattcgaggggaccaatcccac-gcccacttgcgggggccccgtttaaagccagacatagctccgtatggacttagcccaccgaaattggcac 28964112  T
Q  100 cagagggaat 109  Q
    |||| |||||    
T  28964111 cagatggaat 28964102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 10292228 - 10292124
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcaccagag 104  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||||||||||   |||   | || ||||||| |||||||||| |||||    
T  10292228 actaatccgaagggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaatctctgatggactcagcccactgaaattggcatcagag 10292129  T
Q  105 ggaat 109  Q
    |||||    
T  10292128 ggaat 10292124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 24999394 - 24999303
Alignment:
Q  19 accaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcaccagagggaat 109  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||  || ||||  ||||||||| | ||||||||| ||||||||||    
T  24999394 accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctatatgaacttagcccatcaaaattggcatcagagggaat 24999303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20470094 - 20469986
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||  |||||| |||||||||| |||||||||| | ||||||||||||||||||  |||||| | ||||||||| | |||||||| |    
T  20470094 atcgactaatccgagga-accaatcccaccgcccacttgcgggggctctgtttaaagccagagcaagctctgtatggacttagcccatctaaattggctc 20469996  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  20469995 tagagggaat 20469986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21667727 - 21667627
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||  || |||||||||| |||||||||  |||||| | ||||||||||||||||| ||||    
T  21667727 atcgactaatctgaggg-accaattccaccgcccacttgcggatgctccgtttaaaggcagagcaagctctgtatggacttagcccaccgaaattagcac 21667629  T
Q  100 ca 101  Q
    ||    
T  21667628 ca 21667627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 28088464 - 28088355
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||| || ||||||| |||| |||||||||| |||||| |||||| ||||||| |||||||||  |||||||  |||| ||||||||||||| |||    
T  28088464 atcgactattctgaggggatcaatcccaccgcccacttgcggaggccccatttaaagtcagagcaagctctgtatggacttaacccaccgaaattgacac 28088365  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  28088364 caaagggaat 28088355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 18532259 - 18532176
Alignment:
Q  27 caccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    ||||||||| |||| ||||||||||||||| ||||||||||| |||||| | |||||||||||||||||| || | ||||||||    
T  18532259 caccgcccacttgcaggggccccgtttaaatccagagcaagttctgtatggacttagcccaccgaaattgacatctgagggaat 18532176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1219527 - 1219418
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||| |||||| || | |||||||| ||  |||||||||||||||||||||| ||| | |||||| | |||||||||| |||||||  |     
T  1219527 atcgactaatccgaagggaccgatcctaccgcccacttatgggggccccgtttaaagccagaacaaattctgtatggacttagcccactgaaattgatat 1219428  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  1219427 cagagggaat 1219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 13749231 - 13749168
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaa 66  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||||||||  ||||||||||||    
T  13749231 gactaatccgaggggaccaattccactgcccacttgcggggggccccgttctaagccagagcaa 13749168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2166874 - 2166776
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| |||||||||||| |||||||||| |||||||| |    |||||||||||||||||  |||||| | ||||||| || |||||||||||    
T  2166874 atcgactaatctgaggggaccaatcccaccgcccacttgcggggtctta-tttaaagccagagcaagctctgtatggacttagcctactgaaattggcac 2166776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7557974 - 7558039
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    |||||||||| ||||||||||||| |||||| ||| |||||||||  ||||||||||||||| ||||    
T  7557974 atcgactaattcgaggggaccaatcccaccgtccacttgcggggg-tccgtttaaagccagaacaag 7558039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 24018559 - 24018465
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggg-gccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    |||||||| | |||||||||||  ||||||||| ||| |||| | |||||||||||||||||||||  |||||| | |||||||||| |||||||    
T  24018559 cgactaattcaaggggaccaatctcaccgcccacttgtggggaggcccgtttaaagccagagcaagctctgtatggacttagcccactgaaattg 24018465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 28908999 - 28908886
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc-aagtactgtatgtcttagcccaccgaaattggcacca 101  Q
    ||||||||| ||||||| ||||  || |||||| ||||||| |||||||||||||||||| | |||  |||||||   | |||||| | ||||| |||||    
T  28908999 cgactaatctgaggggatcaatcacatcgcccacttgcgggagccccgtttaaagccagaacaaagctctgtatggacttgcccactgtaattgacacca 28908900  T
Q  102 gagggaattaaacc 115  Q
    ||||||||| ||||    
T  28908899 gagggaattgaacc 28908886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33747060 - 33747009
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtt 52  Q
    ||||||||||||||| | ||||||||||||| ||| |||||||||| |||||    
T  33747060 atcgactaatccgagagaaccaattccaccgtccacttgcgggggctccgtt 33747009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 43817784 - 43817835
Alignment:
Q  13 gaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc 64  Q
    |||| |||||||||||||||||| ||||||||| || ||||||||| |||||    
T  43817784 gaggagaccaattccaccgcccacttgcgggggtcctgtttaaagctagagc 43817835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 26168872 - 26168986
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcacc 100  Q
    |||||||| |||||||||||||||  || | |||| ||||| ||| | | |||||||||||| ||||  |||||||   | ||||||||||||||||| |    
T  26168872 atcgactactccgaggggaccaatctcatcccccacttgcgaggggctcatttaaagccagaacaagctctgtatgaacttgcccaccgaaattggcatc 26168971  T
Q  101 agagggaattaaacc 115  Q
    ||  ||||| |||||    
T  26168972 aggaggaatcaaacc 26168986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 35493085 - 35492976
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  35493085 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 35492986  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  35492985 cagagggaat 35492976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8456173 - 8456282
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  8456173 atcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 8456272  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  8456273 cagagggaat 8456282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10190765 - 10190880
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  10190765 atcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 10190864  T
Q  100 cagagggaattaaacc 115  Q
     ||||||||| |||||    
T  10190865 tagagggaatcaaacc 10190880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18176910 - 18177019
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||| ||||||||||||||||    
T  18176910 atcgactaatccgatgggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagtccaccgaaattggcac 18177009  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  18177010 cagagggaat 18177019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 40133472 - 40133581
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||| |||    
T  40133472 atcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattgacac 40133571  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  40133572 cagagggaat 40133581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 45272443 - 45272548
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccaga 103  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  | |||| | ||||||||||||||||||||||||||    
T  45272443 actaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctccgtatggacttagcccaccgaaattggcaccaga 45272542  T
Q  104 gggaat 109  Q
    ||||||    
T  45272543 gggaat 45272548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 49258285 - 49258394
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  49258285 atcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 49258384  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  49258385 tagagggaat 49258394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 53233933 - 53234042
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||  |||||| | ||||||||||||||||||||||    
T  53233933 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagcaagctctgtatggacttagcccaccgaaattggcac 53234032  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  53234033 cagagagaat 53234042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10083842 - 10083957
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||| ||| ||| |||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  10083842 atcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 10083941  T
Q  100 cagagggaattaaacc 115  Q
     ||||||||| |||||    
T  10083942 tagagggaatcaaacc 10083957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45529777 - 45529886
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||||| | ||||||||| |||||||||| |    
T  45529777 atcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatggacttagcccatcgaaattggctc 45529876  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  45529877 cagagggaat 45529886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 46576522 - 46576413
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||| |||||||||||    
T  46576522 atcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccactgaaattggcac 46576423  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  46576422 cagagggaat 46576413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 48977560 - 48977453
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||  |||||| | |||| |||||||||||||||||||    
T  48977560 cgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagcaagctctgtatggacttaacccaccgaaattggcacca 48977461  T
Q  102 gagggaat 109  Q
    || |||||    
T  48977460 gaaggaat 48977453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8097302 - 8097411
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |  |||||| | ||||||||| ||||||| ||||    
T  8097302 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcatgctctgtatggacttagcccatcgaaattagcac 8097401  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  8097402 aagagggaat 8097411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15566523 - 15566631
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  15566523 atcgactaatctgaggggaccaatcccaccgcccacttgcggggg-cccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 15566621  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  15566622 tagagggaat 15566631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25289738 - 25289846
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  25289738 atcgactaattcgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 25289836  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  25289837 tagagggaat 25289846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 25379935 - 25379826
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||    
T  25379935 atcgactaatccgaggggaccaatcccaccgcccgcttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccctccgaaattggcac 25379836  T
Q  100 cagagggaat 109  Q
     ||| |||||    
T  25379835 tagaaggaat 25379826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26174287 - 26174182
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||  |||||| | |||| |||||||||||||||||    
T  26174287 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagcaagctctgtatggacttaacccaccgaaattggcac 26174188  T
Q  100 cagagg 105  Q
    ||||||    
T  26174187 cagagg 26174182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30257798 - 30257689
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||  |||||| | ||||| ||| ||||||||||||    
T  30257798 atcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagtccatcgaaattggcac 30257699  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  30257698 caaagggaat 30257689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 32151598 - 32151489
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||    
T  32151598 atcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgagcttagcccaccgaaattggcac 32151499  T
Q  100 cagagggaat 109  Q
     |||| ||||    
T  32151498 tagagagaat 32151489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39041875 - 39041984
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||  ||| || | ||||||||||||||||||||||    
T  39041875 atcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctctgcatggacttagcccaccgaaattggcac 39041974  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  39041975 cagagagaat 39041984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 52821659 - 52821767
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| || | ||||||||||||||||||||||||||  |||||| | |||||| |||||||||||||||    
T  52821659 atcgactaatccgaggggaccaatcccaccgcccacttac-ggggccccgtttaaagccagagcaagctctgtatggacttagctcaccgaaattggcac 52821757  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  52821758 cagagggaat 52821767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30807176 - 30807285
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcggggg-ccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggca 98  Q
    ||||||||||||||||| |||||| | |||||||| ||||||||| ||||||||||||||||||||||  |||||||  |||||||||||||||||||||    
T  30807176 atcgactaatccgaggg-accaatcctaccgcccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggca 30807274  T
Q  99 ccagagggaat 109  Q
    |||||||||||    
T  30807275 ccagagggaat 30807285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21363117 - 21363008
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| ||||||||||| |||||| |||||||||| |||||||||| ||||||||||||||||||||  |||||| | ||||||| |||||||||| |||    
T  21363117 atcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctgtatggacttagcctaccgaaattgacac 21363018  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  21363017 cagagggaat 21363008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24407435 - 24407326
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||  |||||||||||||| |||||||| | |||||| | |||| |||||||||||| ||||    
T  24407435 atcgactaatccgaggggaccaatcccaccgcccacttgcgatggccccgtttaaagtcagagcaaattctgtatatacttaacccaccgaaattagcac 24407336  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  24407335 cagagagaat 24407326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 34492614 - 34492707
Alignment:
Q  17 ggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||| ||||||||||| ||||||||||    
T  34492614 ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaacgaaattggcagcagagggaat 34492707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 53424200 - 53424308
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||| |||||||||||||| |||||   |||||| | ||||||||||||||||||||||    
T  53424200 atcgactaatccgaggggaccaatcccaccgctcacttgcggggg-cccgtttaaagccatagcaaactctgtatggacttagcccaccgaaattggcac 53424298  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  53424299 caaagggaat 53424308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 26108441 - 26108357
Alignment:
Q  26 ccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    |||| ||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||||||||||    
T  26108441 ccacagcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccagagggaat 26108357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 31537864 - 31537975
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccag 102  Q
    ||||||| |||||||||||||  ||||||||| |||| ||||| |||||||||||||||| |||  |||||| | ||||||||||| |||||||||||||    
T  31537864 gactaattcgaggggaccaatctcaccgcccacttgcaggggctccgtttaaagccagagtaagctctgtatagacttagcccaccaaaattggcaccag 31537963  T
Q  103 agggaattaaac 114  Q
    ||||||| ||||    
T  31537964 agggaatcaaac 31537975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 2511324 - 2511429
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcaccaga 103  Q
    |||||| ||||| ||||||| |||||||||| |||||| || ||||||||||| |||||| ||  |||||||  ||||||||||||||||||||||||||    
T  2511324 actaattcgaggagaccaatcccaccgcccacttgcggaggtcccgtttaaagtcagagcgagctctgtatgaacttagcccaccgaaattggcaccaga 2511423  T
Q  104 gggaat 109  Q
    ||||||    
T  2511424 gggaat 2511429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33398491 - 33398600
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||  |||||| | | || |||||| ||||||||||    
T  33398491 atcgactaattcgagggaaccaatcccaccgcccacttgcgggggccccgtttaaagctagagcaagctctgtatggacataacccaccaaaattggcac 33398590  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  33398591 tagagggaat 33398600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 52455672 - 52455781
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||   || ||||||||||||||||||||| |||||||||  |||| | | ||||||||| | ||||||||||    
T  52455672 atcgactaatccgaggggaccaatcccaccagtcacttgcgggggccccgtttaaagtcagagcaagctctgtgtagacttagcccatcaaaattggcac 52455771  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  52455772 cagagggaat 52455781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29915293 - 29915395
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||| ||| |||| |||| |||||||||| ||||||||| ||||||||||||||| |||||  |||||||| ||||||||||||||| ||||||    
T  29915293 atcgactaattcgatgggatcaatcccaccgcccacttgcggggg-cccgtttaaagccagggcaagctctgtatgtacttagcccaccgaaaatggcac 29915391  T
Q  100 caga 103  Q
    ||||    
T  29915392 caga 29915395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29964446 - 29964548
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||| ||| |||| |||| |||||||||| ||||||||| ||||||||||||||| |||||  |||||||| ||||||||||||||| ||||||    
T  29964446 atcgactaattcgatgggatcaatcccaccgcccacttgcggggg-cccgtttaaagccagggcaagctctgtatgtacttagcccaccgaaaatggcac 29964544  T
Q  100 caga 103  Q
    ||||    
T  29964545 caga 29964548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 40940993 - 40940890
Alignment:
Q  7 taatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagg 105  Q
    |||| ||||||||||||| | ||| |||| ||| ||||||||||||||||| |||||||||  |||||| | ||||| ||||||||||||||||||||||    
T  40940993 taattcgaggggaccaatcctaccacccacttgtgggggccccgtttaaagtcagagcaagctctgtatggacttagtccaccgaaattggcaccagagg 40940894  T
Q  106 gaat 109  Q
    ||||    
T  40940893 gaat 40940890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 1242139 - 1242038
Alignment:
Q  9 atccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa-gtactgtatgt-cttagcccaccgaaattggcaccagaggg 106  Q
    |||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||| |  |||||||  ||||||||||| |||||||||||||||||    
T  1242139 atccaaggggaccaattccaccgcccacttgcggga-ccccgtttaaagccagagcaaagctctgtatggacttagcccaccaaaattggcaccagaggg 1242041  T
Q  107 aat 109  Q
    |||    
T  1242040 aat 1242038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 7470244 - 7470347
Alignment:
Q  6 ctaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcaccagag 104  Q
    |||||| |||||||||||| |||| ||||| |||| ||| ||||||||||||||||||||||  |||||||  |||||||||||||||||||||  ||||    
T  7470244 ctaatctgaggggaccaatcccactgcccacttgcaggg-ccccgtttaaagccagagcaagctctgtatgaacttagcccaccgaaattggcattagag 7470342  T
Q  105 ggaat 109  Q
    |||||    
T  7470343 ggaat 7470347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24165738 - 24165812
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg 76  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||  |||||||    
T  24165738 atcgactaatccgaggggaacaatcccaccgcccacttgc-ggggccccgtttaaagccagagcaagctctgtatg 24165812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 54475855 - 54475780
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg 76  Q
    |||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||  |||||||    
T  54475855 atcgactaatccaaggggaccaatcccaccgcccacttgcggtggccccgtttaaagccaaagcaagctctgtatg 54475780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 55371317 - 55371380
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc 64  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||    
T  55371317 atcgactaatccgaggggaccaatcccaccgcccacttgcgagggccccgttttaagccagagc 55371380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33698729 - 33698794
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    ||||||||||  |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  33698729 atcgactaatttgaggggaccaatcccaccacccatttgcgggagccccgtttaaagccagagcaa 33698794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 53288736 - 53288844
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||| |||  ||||| || ||||||||| ||||||||||||||| ||||||   ||||||  ||||| ||||||||||||||||    
T  53288736 atcgactaattcgaggggactaatctcaccgtccgtttgcgggg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccgaaattggcac 53288834  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  53288835 cagagggaat 53288844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 51532961 - 51532865
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    ||||||||| |||||||||||| |||||| ||| ||||||||| ||| |||||||  ||||||||  |||||| | |||||||||||||||||||||    
T  51532961 cgactaatctgaggggaccaatcccaccgtccacttgcgggggtcccatttaaagttagagcaagctctgtatggacttagcccaccgaaattggca 51532865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48105051 - 48104984
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagt 68  Q
    |||||||||||||| |||||||||  ||||||||| ||| |||||||| |||||||||||||||||||    
T  48105051 atcgactaatccgaagggaccaatctcaccgcccacttgtgggggccctgtttaaagccagagcaagt 48104984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8958058 - 8958164
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggcccc-gtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    ||||| ||||| |||||||||||| |||||||||| |||||||||||||  |||||||| ||||||||   ||||| | ||||||||||| |||||| ||    
T  8958058 atcgattaatcagaggggaccaatcccaccgcccacttgcgggggccccattttaaagctagagcaagctttgtatggacttagcccaccaaaattgaca 8958157  T
Q  99 ccagagg 105  Q
    |||||||    
T  8958158 ccagagg 8958164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 1693007 - 1692913
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    ||||||||||| |||||| | ||| |||||||||| ||||||||| || || |||||||||||||||| |||||| | ||||| ||||||||||||    
T  1693007 atcgactaatctgagggggcaaatcccaccgcccacttgcggggg-cctgtctaaagccagagcaagttctgtatagacttagtccaccgaaattg 1692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25344081 - 25344195
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||  |||||| ||| |||||| | ||||||||||||||||||||||||||||   |||||| | ||||| ||||  |||||| |||    
T  25344081 atcgactaatccgagga-accaatcccatcgcccactagcgggggccccgtttaaagccagagcaaactctgtatggacttagaccacaaaaattgacac 25344179  T
Q  100 cagagggaattaaacc 115  Q
    || ||||||| |||||    
T  25344180 caaagggaatcaaacc 25344195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 26158983 - 26158877
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    ||||||||||||||||| |||| |||||||||| |||||||||| |||||  |||||||||      |||||| | |||| |||||||||||||||||||    
T  26158983 cgactaatccgaggggatcaatcccaccgcccacttgcgggggctccgttctaagccagag------ctgtatggactta-cccaccgaaattggcacca 26158891  T
Q  102 gagggaattaaacc 115  Q
     ||||||| |||||    
T  26158890 aagggaatgaaacc 26158877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 1178343 - 1178244
Alignment:
Q  2 tcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa-gtactgtatgtcttagcccaccgaaattggcacc 100  Q
    |||||||||||||||| |||||| ||||||||||  || |||| |||| |||||||||||||||| || |||||||   | |||||||||||||||||||    
T  1178343 tcgactaatccgaggg-accaatcccaccgcccacgtgtgggg-ccccatttaaagccagagcaaagttctgtatggacttgcccaccgaaattggcacc 1178246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 4462802 - 4462698
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccaga 103  Q
    ||||||||||| ||| |||| |||||| ||| |||||||| ||||||||||||| |||| |||  |||||||  ||||||||| |||||||||  |||||    
T  4462802 actaatccgagtggatcaatcccaccgtccacttgcgggg-ccccgtttaaagctagagtaagctctgtatgaacttagcccatcgaaattggtgccaga 4462704  T
Q  104 gggaat 109  Q
    ||||||    
T  4462703 gggaat 4462698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19857225 - 19857116
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||| | |||||||||||||||||||||||| |||||| | |||| |||||||  ||||||||  ||   ||  |||||||||||||||||| |||    
T  19857225 atcgactattgcgaggggaccaattccaccgcccacttgcggagaccccatttaaagttagagcaagctctaactgaacttagcccaccgaaattgacac 19857126  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  19857125 caaagggaat 19857116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17579158 - 17579274
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgg-gggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    ||||||||||| ||||||||||||  ||||||||| |||||| ||| |||||||||||| | ||||||  |||||| | ||||||||||| |||||  ||    
T  17579158 atcgactaatctgaggggaccaatctcaccgcccacttgcggagggtcccgtttaaagctaaagcaagctctgtatggacttagcccaccaaaattaaca 17579257  T
Q  99 ccagagggaattaaacc 115  Q
    | ||||| ||| |||||    
T  17579258 ctagaggaaatcaaacc 17579274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 53848457 - 53848501
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcggggg 45  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  53848457 atcgactaatccgaggggaccaatcccaccgcccacttgcggggg 53848501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 6127625 - 6127562
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    ||||||||  |||||||||||| |||||| ||||||||||||  || ||||||| |||||||||    
T  6127625 cgactaatttgaggggaccaatcccaccgtccatttgcggggagcctgtttaaaaccagagcaa 6127562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11390776 - 11390661
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||  |||  |||    ||||||||| || ||| ||||||| |||||||||  |||||||  ||||||||||| |||||| |||    
T  11390776 atcgactaatccgaggggaataatctcacgaatcatttgcggaggacccatttaaagacagagcaagctctgtatggacttagcccaccaaaattgacac 11390677  T
Q  100 cagagggaattaaacc 115  Q
    |||||| ||| |||||    
T  11390676 cagaggaaatcaaacc 11390661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 34844549 - 34844455
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc-aagtactgtatgtcttagcccaccgaaattggc 97  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||| ||| |||||||||| ||| |||  ||||||||  ||| ||||||||||||||    
T  34844549 cgactaatccgaggggtccaatcccaccatccacttgcggggg-cccatttaaagccatagcaaagctctgtatgtactagtccaccgaaattggc 34844455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 49167231 - 49167168
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    |||||||| | |||| |||||  ||||| |||| ||||||||| ||||||||||||||||||||    
T  49167231 cgactaattcaagggaaccaaccccaccacccacttgcgggggtcccgtttaaagccagagcaa 49167168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21776589 - 21776525
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    ||||||||||||  ||||||||||||||||| ||||| | ||||  ||| ||||||||||||||||    
T  21776589 atcgactaatccc-ggggaccaattccaccgtccattagtggggagcccatttaaagccagagcaa 21776525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4252419 - 4252463
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcggggg 45  Q
    |||||||||||||||||||||||| |||||| ||| ||| |||||    
T  4252419 atcgactaatccgaggggaccaatcccaccgtccacttgtggggg 4252463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 33793623 - 33793579
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccc 48  Q
    ||||||||||||||||||||| |||||| ||| ||||||| ||||    
T  33793623 gactaatccgaggggaccaatcccaccgtccacttgcgggagccc 33793579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50731260 - 50731308
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggcccc 49  Q
    ||||||||||| |||||||||||| |||||||||| ||| | |||||||    
T  50731260 atcgactaatctgaggggaccaatcccaccgcccacttgtgtgggcccc 50731308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50781594 - 50781546
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggcccc 49  Q
    ||||||||||| |||||||||||| |||||||||| ||| | |||||||    
T  50781594 atcgactaatctgaggggaccaatcccaccgcccacttgtgtgggcccc 50781546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 39266 - 39157
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| |||||| | | ||||||||||||||||||||    
T  39266 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagaacaagttctgtatggacatagcccaccgaaattggcac 39167  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  39166 cagagggaat 39157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34844781 - 34844890
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  34844781 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 34844880  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  34844881 cagagagaat 34844890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 40058875 - 40058984
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  40058875 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 40058974  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  40058975 cagagagaat 40058984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 52983793 - 52983684
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||| |||||||||||    
T  52983793 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccactgaaattggcac 52983694  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  52983693 cagagggaat 52983684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 54127367 - 54127480
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||| |    
T  54127367 cgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagcccaccgaaattggcacaa 54127466  T
Q  102 gagggaattaaacc 115  Q
    ||||||||| ||||    
T  54127467 gagggaattgaacc 54127480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27528818 - 27528927
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||||  |||||| | ||||||||||||||||||||||    
T  27528818 atcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagcaagctctgtatggacttagcccaccgaaattggcac 27528917  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  27528918 cagagggaat 27528927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 32986371 - 32986256
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||||  |||||| | ||||||||||||||||||||||    
T  32986371 atcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctctgtatggacttagcccaccgaaattggcac 32986272  T
Q  100 cagagggaattaaacc 115  Q
    ||||||||||| ||||    
T  32986271 cagagggaattgaacc 32986256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 32990609 - 32990500
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  32990609 atcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 32990510  T
Q  100 cagagggaat 109  Q
     | |||||||    
T  32990509 taaagggaat 32990500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34723973 - 34723864
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||   ||||| | ||||||||||||||||||||||    
T  34723973 atcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctttgtatggacttagcccaccgaaattggcac 34723874  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  34723873 cagagggaat 34723864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 33696305 - 33696417
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccag 102  Q
    |||||||||||| ||||||||  ||||||||| ||||||||||||| |||||||||||||||||  |||||| | |||||||||||||||||||||||||    
T  33696305 gactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccag 33696404  T
Q  103 agggaattaaacc 115  Q
    |||||||| ||||    
T  33696405 agggaattgaacc 33696417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20078007 - 20078122
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||| || ||| |||||||||| || ||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  20078007 atcgactaatccgagggaactaatcccaccgcccacttacgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 20078106  T
Q  100 cagagggaattaaacc 115  Q
    ||| |||||| |||||    
T  20078107 cagtgggaatcaaacc 20078122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5609225 - 5609334
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||| |||| |||||| ||| ||||||||||||| |||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  5609225 atcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 5609324  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  5609325 cagagagaat 5609334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20566524 - 20566415
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| |||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||  |||||| | ||| ||||||||||||||||||    
T  20566524 atcgactaatctgaggggaccaatcccagcgcccacttgcgggggctccgtttaaagccagagcaagctctgtatggactttgcccaccgaaattggcac 20566425  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  20566424 cagagggaat 20566415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 46714564 - 46714459
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccag 102  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| || |||||  |||||| | ||||||||||||||||||||||||     
T  46714564 gactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcaagggcaagctctgtatggacttagcccaccgaaattggcaccaa 46714465  T
Q  103 agggaa 108  Q
    ||||||    
T  46714464 agggaa 46714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 44343688 - 44343579
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||||||| ||||||| ||||||||||||| |||||||||  |||||| | ||||||||||| ||||| ||||    
T  44343688 atcgactaattcgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagtcagagcaagctctgtatggacttagcccaccaaaattagcac 44343589  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  44343588 cagagggaat 44343579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45787727 - 45787836
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||  |||||| | |||||||||| ||||||||||     
T  45787727 atcgactaattcgaggggaccaatcccaccgtccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccactgaaattggcat 45787826  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  45787827 cagagggaat 45787836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 19660555 - 19660670
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||  |||||| | |||| |||||||||||| |||     
T  19660555 atcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttatcccaccgaaatttgcat 19660654  T
Q  100 cagagggaattaaacc 115  Q
    ||||| |||| |||||    
T  19660655 cagagagaatcaaacc 19660670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9517664 - 9517773
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||||||||  |||| ||||  |||||||||||||||||||| |||||||||  |||||| | |||||||||| |||||||||||    
T  9517664 atcgactaatccgaggggaccaatctcaccacccacctgcgggggccccgtttaaagtcagagcaagctctgtatggacttagcccactgaaattggcac 9517763  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  9517764 cagagagaat 9517773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36131533 - 36131642
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| || |||||| ||||||||||| || ||||||  |||||| | ||||| ||||||||||||||||    
T  36131533 atcgactaatccgaggggaccaatcccaccgcccacttacgggggtcccgtttaaagtcatagcaagctctgtatggacttaggccaccgaaattggcac 36131632  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  36131633 catagggaat 36131642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 25852387 - 25852279
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgttt-aaagccagagcaagtactgtatgt-cttagcccaccgaaattggcacc 100  Q
    |||||||||||||||||||||| |||  ||||| ||||| ||| ||||||| ||||||||||||||  |||||||  |||||||||||||||||||||||    
T  25852387 cgactaatccgaggggaccaatcccattgcccacttgcgagggtcccgttttaaagccagagcaagctctgtatggacttagcccaccgaaattggcacc 25852288  T
Q  101 agagggaat 109  Q
    |||||||||    
T  25852287 agagggaat 25852279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 13584279 - 13584386
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||| ||||| ||||||||||||||| |||||| | |||||||||||||||||||||||||  || ||| | ||||||||| |||||||| |||||    
T  13584279 cgactaattcgaggagaccaattccaccgctcatttgtgagggccccgtttaaagccagagcaagctctctatggacttagcccatcgaaattgacacca 13584378  T
Q  102 gagggaat 109  Q
    ||||||||    
T  13584379 gagggaat 13584386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13550382 - 13550271
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| ||||||||||||||| || | |||||||| ||| |||| |||||||||||||||||| |||  | |||| | ||||||||||||||||||||||    
T  13550382 atcgattaatccgaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcggtatggacttagcccaccgaaattggcac 13550283  T
Q  100 cagagggaatta 111  Q
     |||||||||||    
T  13550282 tagagggaatta 13550271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 33992773 - 33992691
Alignment:
Q  28 accgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    |||||||| |||||||||||||||||||||||||||||||   ||||| | ||||||||||||||||||||||||||| ||||    
T  33992773 accgcccacttgcgggggccccgtttaaagccagagcaagctatgtatggacttagcccaccgaaattggcaccagagagaat 33992691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 35674791 - 35674873
Alignment:
Q  28 accgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    |||||||| ||||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||| |||||||||||    
T  35674791 accgcccacttgcgggggccccgtttaaaggcagagcaagctctgtatggacttagcccaccgaaattggctccagagggaat 35674873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13873318 - 13873427
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||||| || ||| |||||||||| |||| |||||||||||| |||| |||| |||||||   |||||||  ||||||| ||||||||||||||    
T  13873318 atcgactaatcccagaggatcaattccaccacccacttgcgggggccctgtttgaagctagagcaaactctgtatgaacttagcctaccgaaattggcac 13873417  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  13873418 cagagggaat 13873427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 49288031 - 49287923
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||||||||  || |||||| ||||||| |||| ||||||||||| ||||| |  ||||||  ||||||||||||||||||||||    
T  49288031 atcgactaatccgaggggaccaatctcagcgcccacttgcgggagccc-gtttaaagccatagcaaattttgtatggacttagcccaccgaaattggcac 49287933  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  49287932 cagagagaat 49287923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 55961777 - 55961881
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    ||||| |||||||| || |||||| |||||||||| ||| |||| |||||||||||| |||||||||  |||||||  ||||||||||||||||||||||    
T  55961777 atcgattaatccgaaggaaccaatcccaccgcccacttgtgggg-ccccgtttaaagtcagagcaagctctgtatggacttagcccaccgaaattggcac 55961875  T
Q  100 cagagg 105  Q
    ||||||    
T  55961876 cagagg 55961881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 18875543 - 18875648
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccag 102  Q
    |||||||||||||||| |||| ||||  |||| ||| |||||||| ||||||||||||||||||  |||||||  |||||||||||||||||| || |||    
T  18875543 gactaatccgaggggatcaatcccactacccacttgtgggggccc-gtttaaagccagagcaagctctgtatggacttagcccaccgaaattgacatcag 18875641  T
Q  103 agggaat 109  Q
    |||||||    
T  18875642 agggaat 18875648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21387510 - 21387617
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||||||   |||||||||| ||||||||  |||||||||||||||||||||  |||||| | ||||||||||| |||||| |||    
T  21387510 atcgactaatccgaggggaccac--ccaccgcccacttgcggggatcccgtttaaagccagagcaagctctgtatagacttagcccaccaaaattgacac 21387607  T
Q  100 cagagggaat 109  Q
     | |||||||    
T  21387608 tatagggaat 21387617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 53787082 - 53787144
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagca 65  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  53787082 cgactaatctgaggggactaatcccaccgcccatttgcgggggctccgtttaaagccagagca 53787144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 22488053 - 22488146
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    ||||||||  ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||  || ||| | ||||| ||||||||||||    
T  22488053 cgactaatttgaggggatcaatcccaccgcccatttgcgggggccccgtttaaagccagaacaagctctatatggacttagtccaccgaaattg 22488146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 32942536 - 32942435
Alignment:
Q  9 atccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagaggga 107  Q
    |||||||||||||||| |||||| ||| ||| |||||  |||||||||||||||| |||  |||||| | ||||||||||||||||||||| ||||| ||    
T  32942536 atccgaggggaccaatcccaccgtccacttgtgggggggccgtttaaagccagagtaagctctgtatggacttagcccaccgaaattggcatcagagaga 32942437  T
Q  108 at 109  Q
    ||    
T  32942436 at 32942435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 12500108 - 12500196
Alignment:
Q  28 accgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaattaaacc 115  Q
    |||||||| ||||||||| |||||||||||||||||||||   ||||| | |||||||||  ||||||||||||||||||||| |||||    
T  12500108 accgcccacttgcgggggtcccgtttaaagccagagcaagctatgtatggacttagcccattgaaattggcaccagagggaatcaaacc 12500196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25969526 - 25969632
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcacc 100  Q
    |||||||||| |||||| |||||| ||||||| || || ||||||||| ||||||||||||||||||| |||||||   | | |||||||||||||||||    
T  25969526 atcgactaattcgaggg-accaatcccaccgctcacttacgggggccc-gtttaaagccagagcaagttctgtatggacttggccaccgaaattggcacc 25969623  T
Q  101 agagggaat 109  Q
    || ||||||    
T  25969624 agggggaat 25969632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 51535795 - 51535731
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagc 64  Q
    |||||||||| ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  51535795 atcgactaattcgaggggaccaatcccaccgcccacttgctgggggccccgtttaaagccagagc 51535731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 27574486 - 27574396
Alignment:
Q  7 taatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattgg 96  Q
    |||||||||||||||||   ||||||||| ||||||||||||| |||||||||||||||||  |||||||   |||||| |||||||||||    
T  27574486 taatccgaggggaccaaactcaccgcccacttgcgggggccccttttaaagccagagcaagctctgtatgaatttagcctaccgaaattgg 27574396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35229342 - 35229243
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttg-cgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||| ||||||||||||| ||||||| || |||  ||||| ||||||||||| |||||||||   ||||| | |||||||||||||||||||||    
T  35229342 atcgactaattcgaggggaccaatcccaccgctcacttgtggggggacccgtttaaagtcagagcaagctatgtatggacttagcccaccgaaattggca 35229243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4065034 - 4064981
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgttta 54  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||| |||||||    
T  4065034 atcgactaatccgaggggaccaatcccaccgcccacttgtgggggctccgttta 4064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 55158366 - 55158409
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggg 44  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  55158366 atcgactaatccgaggggaccaatcccaccacccatttgcgggg 55158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1986009 - 1985948
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagag 63  Q
    ||||||||||||||  | ||||||||||||||||| ||| |||||| ||||||||||||||||    
T  1986009 atcgactaatccgatag-accaattccaccgcccacttgtgggggctccgtttaaagccagag 1985948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4585736 - 4585800
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    ||||||||||||||  |||||||| |||||||||| ||||||||| |||||||||||||| ||||||    
T  4585736 atcgactaatccgaaaggaccaat-ccaccgcccacttgcggggg-cccgtttaaagccaaagcaag 4585800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4912100 - 4912034
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    |||||||||| || ||||| ||||  |||| |||| |||||||||| ||||||||||||||||||||    
T  4912100 atcgactaattcggggggatcaatcacaccacccacttgcgggggctccgtttaaagccagagcaag 4912034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 20527057 - 20527170
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||||||||| ||||||| | |||||||| || ||||| ||| ||||||| | | | ||||  || ||||  |||||||||||||||||||| |    
T  20527057 atcgactaatccgaggagaccaatcctaccgcccacttacgggg-ccctgtttaaaccgaaatcaagctctatatggacttagcccaccgaaattggcgc 20527155  T
Q  100 cagagggaattaaac 114  Q
    |||||||||| ||||    
T  20527156 cagagggaatcaaac 20527170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 22625097 - 22625147
Alignment:
Q  14 aggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc 64  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| ||||||    
T  22625097 aggggaccaatcccaccgcccacttgcgggggccccatttaaaggcagagc 22625147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 51595196 - 51595094
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgta-tgtcttagcccaccgaaattggcac 99  Q
    ||||| |||||||| | || ||||||||||| ||| ||||||||  ||||||||||| |||||||||| || || ||  |||| ||| ||||||||||||    
T  51595196 atcgattaatccgaagagatcaattccaccgtccacttgcggggatcccgtttaaagtcagagcaagttctctattgatttagtccatcgaaattggcac 51595097  T
Q  100 cag 102  Q
    |||    
T  51595096 cag 51595094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 42508406 - 42508466
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagag 63  Q
    |||||||| ||||||||||||||| |||||||| ||| ||||| ||| ||||||| |||||    
T  42508406 cgactaattcgaggggaccaattcaaccgcccacttgtggggggcccatttaaagtcagag 42508466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 9646241 - 9646304
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    ||||||||||||||||| |||| |||| ||||| |||||| ||||| |||  ||||||||||||    
T  9646241 cgactaatccgaggggatcaatcccactgcccacttgcggtggcccggttctaagccagagcaa 9646304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 10125952 - 10125879
Alignment:
Q  43 gggccccgtttaaagccagagcaa-gtactgtatgtcttagcccaccgaaattggcaccagagggaattaaacc 115  Q
    |||||||||||||||| ||||||| |  ||||||| | | |||||| |||||||||||||| |||||| |||||    
T  10125952 gggccccgtttaaagctagagcaaagctctgtatggccttgcccactgaaattggcaccagggggaatcaaacc 10125879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 13017885 - 13017836
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtt 52  Q
    ||||||||||||| |||||||| |||| ||||| ||||||||| ||||||    
T  13017885 cgactaatccgagtggaccaatcccactgcccacttgcgggggtcccgtt 13017836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23639798 - 23639758
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcg 41  Q
    |||||||||||||||||||||||| |||||| ||| |||||    
T  23639798 atcgactaatccgaggggaccaatcccaccgtccacttgcg 23639758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23645456 - 23645416
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcg 41  Q
    |||||||||||||||||||||||| |||||| ||| |||||    
T  23645456 atcgactaatccgaggggaccaatcccaccgtccacttgcg 23645416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 44946076 - 44946185
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  44946076 atcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagttctgtatggacttagcccaccgaaattggcac 44946175  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  44946176 caaagggaat 44946185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 35171974 - 35171865
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||  |    
T  35171974 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggtgc 35171875  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  35171874 cagagggaat 35171865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24196176 - 24196069
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  24196176 atcgactaatccgaggggaccaatcccaccgcccacttgcgggg--cccgtttaaagccagagcaagttctgtatggacttagcccaccgaaatttgcac 24196079  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  24196078 cagagggaat 24196069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 11941233 - 11941348
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||||| | |||| |||||| ||||||||||    
T  11941233 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatggacttaacccaccaaaattggcac 11941332  T
Q  100 cagagggaattaaacc 115  Q
    || |||||||| ||||    
T  11941333 catagggaattgaacc 11941348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 15038133 - 15038024
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||| ||||||||||||| ||||||  |||||| | ||||||||||||||||||||||    
T  15038133 atcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagcaagctctgtatggacttagcccaccgaaattggcac 15038034  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  15038033 caaagggaat 15038024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33827596 - 33827705
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||| ||||||||||| |||||||||| |||| |||| |||||||||||||||||||||  |||||| | ||||||||| ||||||||||||    
T  33827596 atcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagagcaagctctgtatggacttagcccaacgaaattggcac 33827695  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  33827696 cagagggaat 33827705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28669047 - 28668946
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| ||||||  |||||| | ||||| ||||||||||||||||    
T  28669047 atcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagcaagctctgtatggacttagtccaccgaaattggcac 28668948  T
Q  100 ca 101  Q
    ||    
T  28668947 ca 28668946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30466853 - 30466962
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||| ||||||||| |||| ||||| |||||||||||| ||||||||||||||||||  |||||| | |||||||||||||||||||||     
T  30466853 atcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcag 30466952  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  30466953 cagagagaat 30466962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36242335 - 36242444
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||  |||  | | |||||||||||||||||| |||    
T  36242335 atcgattaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagctctggctggacttagcccaccgaaattgacac 36242434  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  36242435 cagagggaat 36242444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 3943912 - 3943810
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||||| ||||||||||| ||||| |||| ||||||| |||||||||||||||||||||||  |||||| | ||||||| ||||||||||||||||    
T  3943912 cgactaatccaaggggaccaatcccaccacccacttgcgggagccccgtttaaagccagagcaagctctgtatggacttagccaaccgaaattggcacca 3943813  T
Q  102 gag 104  Q
    |||    
T  3943812 gag 3943810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 44976176 - 44976286
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggg-gccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    |||||||||||||| |||| |||| |||||||||| |||||||| ||||||||||||||||||||||   |||||| | ||||||||||| |||||||||    
T  44976176 atcgactaatccgaagggatcaatcccaccgcccacttgcggggagccccgtttaaagccagagcaaactctgtatggacttagcccaccaaaattggca 44976275  T
Q  99 ccagagggaat 109  Q
    |||||||||||    
T  44976276 ccagagggaat 44976286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 10582015 - 10582122
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||| ||||| ||||| |||||| ||||||||| ||||||||  |||||||  ||||||||||||||||||||||    
T  10582015 atcgactaattcgaggggaccaatcccac-gcccacttgcgagggccc-gtttaaagctagagcaagctctgtatggacttagcccaccgaaattggcac 10582112  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  10582113 cagagggaat 10582122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17324939 - 17324831
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    ||||||||||  |||||||| ||| |||||||||| ||| ||||||||  |||||||||||||||||  |||||||  ||||||||||||||||||||||    
T  17324939 atcgactaatttgaggggactaatcccaccgcccacttgtgggggccca-tttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 17324841  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  17324840 cagagggaat 17324831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 25293333 - 25293231
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||| |||||| |||| |||||||||||||||||||||||| |    || |   ||||||||||||||||||||||    
T  25293333 atcgactaatccgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcta----tgaa---cttagcccaccgaaattggcac 25293241  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  25293240 cagagggaat 25293231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34516437 - 34516530
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaatt 94  Q
    |||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||  |||||| | |||||||||||||||||    
T  34516437 atcgactaatccgaggggaccaatcccaccgcccacttgcagggg-cccgtttaaagcgagagcaagctctgtatggacttagcccaccgaaatt 34516530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27269367 - 27269467
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||| |||| |||||||||| ||||||| |  | ||||||||||||||||||| || ||| | |||||||||||||||||| |||    
T  27269367 atcgactaatccgaggggatcaatcccaccgcccacttgcgggagggctgtttaaagccagagcaagttctatatggacttagcccaccgaaattgacac 27269466  T
Q  100 c 100  Q
    |    
T  27269467 c 27269467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2140509 - 2140615
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||| ||| |||||||||||||||||  |||||||    |  |||||||||||| |||    
T  2140509 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggggcccatttaaagccagagcaagctctgtatg---gactccaccgaaattgacac 2140605  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  2140606 cagagggaat 2140615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 5394189 - 5394082
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    ||||||||||||  |||||||| |||||||||| |||||| |||||| ||||||| ||||||||   |||||| | ||||||||| |||||||| |||||    
T  5394189 cgactaatccgaacggaccaatcccaccgcccacttgcggcggccccatttaaagtcagagcaaactctgtatggacttagcccatcgaaattgacacca 5394090  T
Q  102 gagggaat 109  Q
    ||||||||    
T  5394089 gagggaat 5394082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 41330014 - 41329908
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    ||||||||| ||||||||||||  ||||||||| ||| ||||||||| |||||||||||||||||  || ||| | |||||||| || ||||||||||||    
T  41330014 cgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagccagagcaagctct-tatggacttagcccgccaaaattggcacca 41329916  T
Q  102 gagggaat 109  Q
    ||||||||    
T  41329915 gagggaat 41329908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 4567480 - 4567565
Alignment:
Q  21 caattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagg 105  Q
    |||| |||||||||| ||| |||||||||||||||||||||| ||||  |||||| |  |||||||||||||||||||||||||||    
T  4567480 caatcccaccgcccacttgtgggggccccgtttaaagccagaacaagctctgtatggatttagcccaccgaaattggcaccagagg 4567565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36390592 - 36390696
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    ||||||| ||||||||| |||||| |||||||||| ||||||||| ||| ||||||| |||||||||   ||||||  ||||| ||||||||||||||||    
T  36390592 atcgactgatccgaggg-accaatcccaccgcccacttgcgggggtcccatttaaagtcagagcaagctttgtatggacttagtccaccgaaattggcac 36390690  T
Q  100 cagagg 105  Q
    ||||||    
T  36390691 cagagg 36390696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 41314165 - 41314057
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| ||||| |||||||||||| |||||| ||| |||||||  ||| |||||||| |||||||||  |||||| | |||||||||||||||||| |||    
T  41314165 atcgattaatctgaggggaccaatcccaccgtccacttgcgggatccc-gtttaaagtcagagcaagctctgtatagacttagcccaccgaaattgacac 41314067  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  41314066 cagagggaat 41314057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 43374353 - 43374457
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    |||||||||||||| ||||||||| ||||||| || ||||||||||     ||||||||||||||||   |||||   ||||||||||||||||||||||    
T  43374353 atcgactaatccgaagggaccaatcccaccgctcacttgcgggggc-----ttaaagccagagcaagctttgtataaacttagcccaccgaaattggcac 43374447  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  43374448 cagagggaat 43374457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 714148 - 714244
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattgg 96  Q
    ||||||||||| |||||||| ||  ||||||||||||||||||||| |||||||||| ||||||||   || ||| | |||||||||||||||||||    
T  714148 atcgactaatctgaggggacgaaacccaccgcccatttgcgggggctccgtttaaagtcagagcaaactctctatggacttagcccaccgaaattgg 714244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1191687 - 1191579
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||| |||||||||||  || || ||||| | |||||||||||||||||||   |||||| | ||||||||||||||||||| ||    
T  1191687 atcgactaattcgaggggaacaattccaccgttcactttcggggacaccgtttaaagccagagcaaactctgtatggacttagcccaccgaaattggtac 1191588  T
Q  100 cagagggaa 108  Q
     ||||||||    
T  1191587 tagagggaa 1191579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8259071 - 8258962
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||| || || ||| |||||||| | |||||||||||||| ||||||||||| ||||  |||||| | |||| |||||| ||||||||      
T  8259071 atcgactaatccgaaggaactaatcccaccgcctacttgcgggggccccgattaaagccagaacaagatctgtatggacttaacccaccaaaattggcgt 8258972  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  8258971 cagagggaat 8258962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13266663 - 13266555
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||  |||||||||||| |||   |||| |||||||| ||||||||||||||||||||||  |||||| | ||||| |||||| |||||||||    
T  13266663 atcgactaatttgaggggaccaatcccattacccacttgcgggg-ccccgtttaaagccagagcaagctctgtatggacttagtccaccggaattggcac 13266565  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  13266564 cagagtgaat 13266555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 27290726 - 27290653
Alignment:
Q  37 ttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    ||||||||| |||||||||||||||||||||  |||||| | |||||||||||||||||||||||  |||||||    
T  27290726 ttgcggggggcccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccgaagggaat 27290653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 45271558 - 45271449
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    ||||||||||  ||||||| ||||  | |||| || |||| |||||  |||||||||||||||||||  |||||||  |||||||||| |||||||||||    
T  45271558 atcgactaatttgaggggatcaatctctccgctcacttgcaggggcttcgtttaaagccagagcaagctctgtatggacttagcccactgaaattggcac 45271459  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  45271458 cagagggaat 45271449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19054200 - 19054084
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    ||||||||||||||| |||||||| |||||||||| |||| |||||  || |||||||||| ||||||  |||||| | |||||||||||||| ||  ||    
T  19054200 atcgactaatccgagcggaccaatcccaccgcccacttgcggggggttccatttaaagccaaagcaagctctgtatggacttagcccaccgaagttaaca 19054101  T
Q  99 ccagagggaattaaacc 115  Q
    ||||| ||||| |||||    
T  19054100 ccagaaggaatcaaacc 19054084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 44610211 - 44610147
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    |||||||||||| ||||||||| |||||||||| |||| |||||||| |||||||| ||||||||    
T  44610211 cgactaatccgatgggaccaatcccaccgcccacttgcaggggccccatttaaagctagagcaag 44610147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 23787056 - 23787146
Alignment:
Q  26 ccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgtctt-agcccaccgaaattggcaccagagggaattaaacc 115  Q
    |||||||||| |||||| || ||| ||||||| ||||||||   |||||||  || ||||||||||||||||||||||||||||| |||||    
T  23787056 ccaccgcccacttgcggaggtcccatttaaagtcagagcaaactctgtatggatttagcccaccgaaattggcaccagagggaatcaaacc 23787146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 14486997 - 14486948
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtt 52  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||||    
T  14486997 cgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtt 14486948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4769340 - 4769265
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg 76  Q
    ||||||||||  |||||||||||   ||||| ||| |||||||| ||||||||||||||||||||||  |||||||    
T  4769340 atcgactaatttgaggggaccaacctcaccgtccacttgcggggcccccgtttaaagccagagcaagctctgtatg 4769265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4852703 - 4852649
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaa 56  Q
    ||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  4852703 atcgattaatccgaggggaccaattccaccgtccacttgc-ggggccccgtttaaa 4852649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 18708649 - 18708586
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaa 66  Q
    ||||||||| ||||||| |||| |||||| ||||||||||||| ||||||| ||| ||||||||    
T  18708649 cgactaatctgaggggatcaatcccaccgtccatttgcgggggtcccgttttaagtcagagcaa 18708586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 31778202 - 31778139
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    |||||||| ||| ||||||||  ||||| ||| ||||||||||||| |||||||||||||||||    
T  31778202 gactaatctgagaggaccaatctcaccgtccacttgcgggggccccatttaaagccagagcaag 31778139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45132461 - 45132398
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc 64  Q
    ||||| ||||||||| |||||||| | || ||||| ||| ||||||||||||||||||||||||    
T  45132461 atcgattaatccgagaggaccaatcctactgcccacttgtgggggccccgtttaaagccagagc 45132398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 19849991 - 19849941
Alignment:
Q  17 ggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    ||||||||  ||||||||| |||||||||||| ||||||||||||||||||    
T  19849991 ggaccaatctcaccgcccacttgcgggggccctgtttaaagccagagcaag 19849941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9400984 - 9401047
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc 64  Q
    |||||||||||  |||  |||||| |||| ||||| |||||||||||| |||||||||||||||    
T  9400984 atcgactaatctaaggaaaccaatcccactgcccacttgcgggggccctgtttaaagccagagc 9401047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18976478 - 18976521
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggg 44  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||    
T  18976478 atcgactaattcgaggggaccaatcccaccgcccacttgcgggg 18976521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 109
Target Start/End: Complemental strand, 32845187 - 32845156
Alignment:
Q  78 cttagcccaccgaaattggcaccagagggaat 109  Q
    ||||||||||||||||||||||||||||||||    
T  32845187 cttagcccaccgaaattggcaccagagggaat 32845156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44929869 - 44929923
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaa 55  Q
    |||||||||| | ||||||||||| |||||| ||| ||||||||| |||||||||    
T  44929869 atcgactaattcaaggggaccaatcccaccgtccacttgcgggggtcccgtttaa 44929923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5608057 - 5608166
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcac 99  Q
    ||||||| ||| || |||| |||| || ||| ||||||| ||| || |||||||||| |||||||||  || ||||  ||||||||||| |||||| |||    
T  5608057 atcgactcatctgaagggatcaatcccgccgaccatttgtgggagctccgtttaaagtcagagcaagctctatatggacttagcccaccaaaattgacac 5608156  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  5608157 cagagagaat 5608166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18692134 - 18692090
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcggggg 45  Q
    |||||||||| ||||||||||||| |||||||||| ||| |||||    
T  18692134 atcgactaatacgaggggaccaatcccaccgcccacttgtggggg 18692090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 4621260 - 4621369
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  4621260 atcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 4621359  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  4621360 cagagggaat 4621369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24122197 - 24122088
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  24122197 atcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 24122098  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  24122097 cagagggaat 24122088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24674567 - 24674458
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  24674567 atcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 24674468  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  24674467 cagagggaat 24674458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7766750 - 7766859
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||  |||||| | ||||||||||||||||| ||||    
T  7766750 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagcaagctctgtatggacttagcccaccgaaattagcac 7766849  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  7766850 cagagggaat 7766859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15059425 - 15059534
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  15059425 atcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 15059524  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  15059525 cagagagaat 15059534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 30677348 - 30677235
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    ||||||||| |||||||||||| |||||||||| ||||||||| ||| |||||||||| ||||||  |||||| | ||||||||||||||||||||||||    
T  30677348 cgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagcaagctctgtatggacttagcccaccgaaattggcacca 30677249  T
Q  102 gagggaattaaacc 115  Q
    |||||||| |||||    
T  30677248 gagggaatcaaacc 30677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 8254775 - 8254879
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||| | |||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| |||    
T  8254775 atcgactaattcaaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctgtatgaacttagcccaccgaaattgacac 8254874  T
Q  100 cagag 104  Q
    |||||    
T  8254875 cagag 8254879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 8077810 - 8077712
Alignment:
Q  12 cgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||  |||||| | ||||||||||||||||||||||||||| ||||    
T  8077810 cgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccagagagaat 8077712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17935943 - 17935834
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||   |||||| | ||||||||||||||||||||||    
T  17935943 atcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagccagagcaaactctgtatggacttagcccaccgaaattggcac 17935844  T
Q  100 cagagggaat 109  Q
     ||| |||||    
T  17935843 tagaaggaat 17935834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 46607982 - 46607875
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    ||||||||||||||||| |||| |||||||||| |||||||||  || ||||||| |||||||||  |||||| | ||||||||||||||||||||||||    
T  46607982 cgactaatccgaggggatcaatcccaccgcccacttgcgggggggccttttaaagtcagagcaagctctgtatggacttagcccaccgaaattggcacca 46607883  T
Q  102 gagggaat 109  Q
    ||||||||    
T  46607882 gagggaat 46607875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 1379071 - 1378967
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||| ||||||||||||  ||||| ||| ||||||||| |||||||||||||||||||||| |||||| | |||||||||||||||||| |||    
T  1379071 atcgactaatctgaggggaccaatctcaccgtccacttgcggggg-cccgtttaaagccagagcaagttctgtatggacttagcccaccgaaattgacac 1378973  T
Q  100 cagagg 105  Q
    ||||||    
T  1378972 cagagg 1378967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7197270 - 7197378
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgta-tgtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||||| |||||||||||||||||||  ||||| || |||| ||||||||||||||||     
T  7197270 atcgactaatccgaggggaccaatctcaccgcccacttgcaggggcctcgtttaaagccagagcaaggtctgtattgactta-cccaccgaaattggcat 7197368  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  7197369 cagagggaat 7197378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9500378 - 9500487
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||| | |||||||  ||||||||| ||| |||||| ||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  9500378 atcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 9500477  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  9500478 cagagagaat 9500487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 45859070 - 45859175
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccaga 103  Q
    |||||||||||||||||||| | ||| |||| |||||||||||| ||||||||| ||||||||   ||||| | ||||||||||||||||||||||||||    
T  45859070 actaatccgaggggaccaatcctaccacccacttgcgggggccctgtttaaagcaagagcaagcgatgtatggacttagcccaccgaaattggcaccaga 45859169  T
Q  104 gggaat 109  Q
    ||||||    
T  45859170 gggaat 45859175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23734291 - 23734181
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    ||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||| || |||||   |||||| | |||||||||||||||||||||    
T  23734291 atcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaactctgtatggacttagcccaccgaaattggca 23734192  T
Q  99 ccagagggaat 109  Q
     ||||||||||    
T  23734191 tcagagggaat 23734181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23741483 - 23741373
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc-gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    ||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||| || |||||   |||||| | |||||||||||||||||||||    
T  23741483 atcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaactctgtatggacttagcccaccgaaattggca 23741384  T
Q  99 ccagagggaat 109  Q
     ||||||||||    
T  23741383 tcagagggaat 23741373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 32729716 - 32729610
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcaccag 102  Q
    |||||||||| |||||| |||| |||||||||| |||||||| |||| |||||||||||||||||  |||||||   | ||||||||||||||||||||     
T  32729716 cgactaatccaaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctctgtatggacttgcccaccgaaattggcaccat 32729617  T
Q  103 agggaat 109  Q
    |||||||    
T  32729616 agggaat 32729610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 168371 - 168266
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccaga 103  Q
    |||||||||||||||||||| |||||| ||| | ||||| | ||||||||||| |||| ||||  |||||||  ||||||||||||||||||||||||||    
T  168371 actaatccgaggggaccaatcccaccggccactagcgggagtcccgtttaaagtcagaacaagctctgtatgaacttagcccaccgaaattggcaccaga 168272  T
Q  104 gggaat 109  Q
    ||||||    
T  168271 gggaat 168266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 7578579 - 7578474
Alignment:
Q  5 actaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccaga 103  Q
    ||||||||||||| |||||| ||||| |||| ||||| ||||||||||||||| |||||||||   ||||| | |||||||||||||||||||||||| |    
T  7578579 actaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaagtcagagcaagctttgtatggacttagcccaccgaaattggcaccata 7578480  T
Q  104 gggaat 109  Q
    ||||||    
T  7578479 gggaat 7578474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27454887 - 27454998
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgc--gggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggc 97  Q
    |||||||||||||||||||||||| ||||||||||  |||  ||||| |||||||||||||||||||||  |||||| | |||||| |||||||||||||    
T  27454887 atcgactaatccgaggggaccaatcccaccgcccacatgcggggggggcccgtttaaagccagagcaagctctgtatggacttagctcaccgaaattggc 27454986  T
Q  98 accagagggaat 109  Q
    | ||||| ||||    
T  27454987 atcagagtgaat 27454998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 7947011 - 7946909
Alignment:
Q  7 taatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagg 105  Q
    ||||| ||||||||||||  |||| |||| |||||||| |||| |||||||| ||||||||  |||||| | ||||||||||||||||||||||||||||    
T  7947011 taatctgaggggaccaatctcaccacccacttgcgggg-ccccatttaaagcgagagcaagctctgtatagacttagcccaccgaaattggcaccagagg 7946913  T
Q  106 gaat 109  Q
    ||||    
T  7946912 gaat 7946909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8779759 - 8779854
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattg 95  Q
    |||||||||||||||||||||||| |||||||| | ||| |||||||||||||||||| |||| |||   ||||| | ||||||||||||||||||    
T  8779759 atcgactaatccgaggggaccaatcccaccgcctacttgtgggggccccgtttaaagctagagtaagctgtgtatggacttagcccaccgaaattg 8779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 34778513 - 34778401
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgtcttagcccaccgaaattggcacc 100  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| |||||   |||||||    | |||||| ||||||| |||    
T  34778513 atcgactaatccaaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccaaagcaaactctgtatg--gaaacccaccaaaattggtacc 34778416  T
Q  101 agagggaattaaacc 115  Q
    ||||||||| |||||    
T  34778415 agagggaatcaaacc 34778401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22910045 - 22909979
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||| |||||||||| |||||||||    
T  22910045 atcgactaatccgaggggacaaatcccaccgcccacttgcgggggctccgtttaaagtcagagcaag 22909979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 12876965 - 12877034
Alignment:
Q  7 taatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg 76  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||  |||||||    
T  12876965 taatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagctagagcaagctctgtatg 12877034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18647027 - 18646918
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| |||||||| ||||  ||||||||| || | ||||| |||||||||||||||||||    ||||| | ||||||||||||||||||||||    
T  18647027 atcgactaattcgaggggatcaatctcaccgcccacttacaggggctccgtttaaagccagagcaaactttgtatagacttagcccaccgaaattggcac 18646928  T
Q  100 cagagggaat 109  Q
    ||||| ||||    
T  18646927 cagagagaat 18646918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 2537864 - 2537801
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    ||||||||||||||||||||| || ||||||| ||||||||| |||||||||||||| ||||||    
T  2537864 gactaatccgaggggaccaatccctccgcccacttgcggggggcccgtttaaagccaaagcaag 2537801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 50202720 - 50202661
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagcca 60  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  50202720 atcgattaatccgaggggaccaattccaccgcccacttgcgagggtcccgtttaaagcca 50202661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36155911 - 36156020
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||  || ||||||||| ||||||||||  ||||||||||| ||||||| | | ||||||  ||| || | ||| ||||||||||||||||||    
T  36155911 atcgactaatttgaagggaccaatcccaccgcccacctgcgggggccctgtttaaaactaaagcaagctctgcatggacttggcccaccgaaattggcac 36156010  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  36156011 cagagggaat 36156020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 37351478 - 37351538
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc 64  Q
    |||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  37351478 cgactaatccgaggggaccaatcccaccgcccacttgtggggg-cccgtttaaagccagagc 37351538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 2272518 - 2272403
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg-tcttagcccaccgaaattggcac 99  Q
    |||||||||||||| |||| |||| | |||||||  |||  |||||||||||||||| ||||||||    ||||||  ||||||||| |||||||||||     
T  2272518 atcgactaatccgatgggatcaatcctaccgcccccttgtaggggccccgtttaaagtcagagcaaactttgtatgaacttagcccagcgaaattggcat 2272419  T
Q  100 cagagggaattaaacc 115  Q
    |||||||||| |||||    
T  2272418 cagagggaatcaaacc 2272403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 16899675 - 16899568
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagc-aagtactgtatgtcttagcccaccgaaattggcacca 101  Q
    ||||||||||||||||||||||  ||||| ||| |||| |||||||||||  || ||||||| |||   ||||||   | ||||||||||||||||||||    
T  16899675 cgactaatccgaggggaccaatctcaccgtccacttgcaggggccccgttctaaaccagagcaaagctttgtatggactggcccaccgaaattggcacca 16899576  T
Q  102 gagggaat 109  Q
    ||||||||    
T  16899575 gagggaat 16899568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48699933 - 48699866
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaag-ccagagcaag 67  Q
    |||||||||||||| |||| |||| |||||||||| |||||||||| |||||||||| ||||||||||    
T  48699933 atcgactaatccgaagggaacaatcccaccgcccacttgcgggggctccgtttaaagcccagagcaag 48699866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26513171 - 26513236
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    |||||||||||||||||||||| | |||||||||| ||| ||||| ||||||||||| |||||||||    
T  26513171 atcgactaatccgaggggaccattcccaccgcccacttgtggggg-cccgtttaaagtcagagcaag 26513236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 45331644 - 45331746
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggg-gccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggca 98  Q
    ||||| ||||| |||||||  ||| |||||| ||| |||||||| |||||||||||||||| ||||||  |||||| | |||||||||||||||||| ||    
T  45331644 atcgattaatctgaggggattaatcccaccgtccacttgcggggagccccgtttaaagccaaagcaagctctgtatggacttagcccaccgaaattgcca 45331743  T
Q  99 cca 101  Q
    |||    
T  45331744 cca 45331746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32930923 - 32930818
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| ||||| ||||||| |||| |||||  ||| |||| ||| ||||||||||||||||||||||  ||| || | ||||||||||| |||| |||||    
T  32930923 atcgattaatctgaggggatcaatcccaccatccacttgcagggaccccgtttaaagccagagcaagctctgcatggacttagcccaccaaaatgggcac 32930824  T
Q  100 cagagg 105  Q
    ||||||    
T  32930823 cagagg 32930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 29057363 - 29057427
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    ||||||||  ||||||||||||  || |||||||||||||||| |||||| ||||||||||||||    
T  29057363 cgactaatttgaggggaccaatcacatcgcccatttgcgggggtcccgttgaaagccagagcaag 29057427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6776254 - 6776201
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgttta 54  Q
    ||||||||||| ||| ||| ||||||||||||| | ||||||||||||||||||    
T  6776254 atcgactaatctgagtggatcaattccaccgcctacttgcgggggccccgttta 6776201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 18533759 - 18533856
Alignment:
Q  13 gaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    |||||||||||| |||| ||||| |||| |||||||||||||||| |||| ||||  || ||| | ||||| ||| |||||||||||| |||| ||||    
T  18533759 gaggggaccaatcccacggcccacttgcaggggccccgtttaaagtcagaacaagctctatatggacttagtccatcgaaattggcactagagagaat 18533856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21726903 - 21726794
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||| ||||| ||||||| |||  |||||||||| ||| ||||| |||||||||||| ||| ||||  || ||| | |||| |||| ||||||||||||    
T  21726903 atcgattaatctgaggggatcaaccccaccgcccacttgtgggggacccgtttaaagctagaacaagctctatatggacttaacccatcgaaattggcac 21726804  T
Q  100 cagagggaat 109  Q
    || |||||||    
T  21726803 caaagggaat 21726794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 33905545 - 33905642
Alignment:
Q  13 gaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    ||||||| |||| |||||| ||| || ||| ||||||||||||||||||| |||   |||||| | |||| |||||||||||||  ||||||||||||    
T  33905545 gaggggatcaatcccaccgtccacttacggaggccccgtttaaagccagaacaaactctgtatggacttaacccaccgaaattgataccagagggaat 33905642  T

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Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26820361 - 26820286
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg 76  Q
    |||||||||||||| | || ||||||||||  ||| |||| |||| ||| ||||||| |||||||||| |||||||    
T  26820361 atcgactaatccgaagcgatcaattccaccatccacttgcaggggtcccatttaaaggcagagcaagttctgtatg 26820286  T

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Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27159259 - 27159212
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccc 48  Q
    ||||||||||| |||||||||||| |||||| ||| ||||||||||||    
T  27159259 atcgactaatctgaggggaccaatcccaccgtccacttgcgggggccc 27159212  T

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Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 39964605 - 39964571
Alignment:
Q  81 agcccaccgaaattggcaccagagggaattaaacc 115  Q
    ||||||||||||||||||||||||||||| |||||    
T  39964605 agcccaccgaaattggcaccagagggaatcaaacc 39964571  T

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Target: scaffold0217 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7332 - 7441
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||  |||||| | ||||||||||||||||||||||    
T  7332 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagaaagctctgtatggacttagcccaccgaaattggcac 7431  T
Q  100 cagagggaat 109  Q
    | ||||||||    
T  7432 cggagggaat 7441  T

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Target: scaffold0070 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40498 - 40390
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  40498 atcgactaatccgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 40400  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  40399 cagagggaat 40390  T

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Target: scaffold0019 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 161983 - 161874
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||||||||  |||||| | ||||||||||||||||||||||    
T  161983 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 161884  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  161883 cagagggaat 161874  T

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Target: scaffold0623 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1079 - 1188
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||  |||||| | |||||||||||||||||||| |    
T  1079 atcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctc 1178  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  1179 cagagggaat 1188  T

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Target: scaffold0366 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9322 - 9431
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||| ||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||  |||||| | |||||||||||||||||||| |    
T  9322 atcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctc 9421  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  9422 cagagggaat 9431  T

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Target: scaffold0366; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 12027 - 12128
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccag 102  Q
    ||||||| ||||||||||||| |||||| ||| ||| |||| |||| |||||||||||||||||  |||||||  |||||||||||||||||||| ||||    
T  12027 gactaattcgaggggaccaatcccaccgtccacttgtgggg-ccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctccag 12125  T
Q  103 agg 105  Q
    |||    
T  12126 agg 12128  T

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Target: scaffold0026 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 97391 - 97498
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcacca 101  Q
    |||||||| |||| |||||||| |||||||||| ||||||||| ||||||||||| |||||||||  |||||| | ||||||||||||||||||||||||    
T  97391 cgactaatacgagaggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagcaagctctgtatggacttagcccaccgaaattggcacca 97490  T
Q  102 gagggaat 109  Q
    ||||||||    
T  97491 gagggaat 97498  T

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Target: scaffold0051 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 52894 - 53003
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    ||||||||||||||| |||||||| | ||||||||  ||||||||||||||||||||||||||||||  |||||| |  || ||||||||||||||||||    
T  52894 atcgactaatccgagaggaccaatcctaccgcccacctgcgggggccccgtttaaagccagagcaagctctgtatggattttgcccaccgaaattggcac 52993  T
Q  100 cagagggaat 109  Q
    ||||||||||    
T  52994 cagagggaat 53003  T

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Target: scaffold0016 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32462 - 32357
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||||| | |||||||||||||||||  |||||| | |||||||||||||||||||| |    
T  32462 atcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctc 32363  T
Q  100 cagagg 105  Q
    ||||||    
T  32362 cagagg 32357  T

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Target: scaffold1175 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 2452 - 2524
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatg 76  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  2452 gactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatg 2524  T

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Target: scaffold0049 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 66926 - 66862
Alignment:
Q  3 cgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaag 67  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  66926 cgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 66862  T

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Target: scaffold0068 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41667 - 41776
Alignment:
Q  1 atcgactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcac 99  Q
    |||||||||||||||||||||||| |||  ||||| |||| ||||||||||||||||||||||||||  |||||| | |||||| || ||||||||| ||    
T  41667 atcgactaatccgaggggaccaatcccattgcccacttgcaggggccccgtttaaagccagagcaagctctgtatggacttagcacaacgaaattggaac 41766  T
Q  100 cagagggaat 109  Q
     |||||||||    
T  41767 aagagggaat 41776  T

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Target: scaffold0459 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 10720 - 10821
Alignment:
Q  4 gactaatccgaggggaccaattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtatgt-cttagcccaccgaaattggcaccag 102  Q
    ||||||| ||||||||||||| |||||| ||| ||| |||| |||| |||||||||||||||||  |||||||  |||||||||||||||||||| ||||    
T  10720 gactaattcgaggggaccaatcccaccgtccacttgtgggg-ccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctccag 10818  T
Q  103 agg 105  Q
    |||    
T  10819 agg 10821  T

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Target: scaffold0157 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 20369 - 20281
Alignment:
Q  28 accgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaattaaacc 115  Q
    |||||||| ||||||||| |||||||||||||||||||||   ||||| | |||||||||  ||||||||||||||||||||| |||||    
T  20369 accgcccacttgcgggggtcccgtttaaagccagagcaagctatgtatggacttagcccattgaaattggcaccagagggaatcaaacc 20281  T

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Target: scaffold0717 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 1 - 90
Alignment:
Q  21 caattccaccgcccatttgcgggggccccgtttaaagccagagcaagtactgtat-gtcttagcccaccgaaattggcaccagagggaat 109  Q
    |||| ||||||||||  || |||||||||||||||||| |||||||   |||||| | ||||||||| |||||||| ||  |||||||||    
T  1 caatcccaccgcccacatgtgggggccccgtttaaagctagagcaaactctgtatggacttagcccatcgaaattgacataagagggaat 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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