View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17597_low_43 (Length: 236)
Name: NF17597_low_43
Description: NF17597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17597_low_43 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 9572546 - 9572357
Alignment:
| Q |
29 |
ggtactacaaatgtagattgccaaaccttaatgtcaagcccttggagttctatcttaactaatgttccctccgaaaaagttagtggtcaagatgtctttt |
128 |
Q |
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| T |
9572546 |
ggtactacaaatgtagattgccaaaccttaatgtcaagcccttggagttctatcttaactaatgttccctccgaaaaagttagtggtcaagatgtctttt |
9572447 |
T |
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| Q |
129 |
ccgagttcgatacaatttctagggaaggttttgagacagctggaaagagctgtttaaacgctgataacgctacttctgagggtgcctatg |
218 |
Q |
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| T |
9572446 |
ccgagttcgatacaatttctagggaaggttttgagacagctggaaagagctgtttaaacactgataacgctacttctgagggtgcctatg |
9572357 |
T |
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