View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17597_low_54 (Length: 216)
Name: NF17597_low_54
Description: NF17597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17597_low_54 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 27641139 - 27641326
Alignment:
| Q |
13 |
tattcttcatcaatcatgtagtatagtatggtagaattgcatgttgtctatcaattagaatttcctttatttattagattacgaacaaccaattttggtt |
112 |
Q |
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| T |
27641139 |
tattcttcatcaatcatgtagtatagtatggtagaattgcatgttgtctatcaattagaatttcctttatttattagattatgaacaaccaattttggtt |
27641238 |
T |
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| Q |
113 |
ttggatgctatagttttgctaaaagctgcaattaatttggaccatgatggtattatacatggtgtttgatgatgattgctgtttagga |
200 |
Q |
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| T |
27641239 |
ttggatgctatagttttgctaaaagctgcaattaatttggaccatgatggtattatacatggtgtttgatgatgattgctgtttagga |
27641326 |
T |
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