View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17600_low_6 (Length: 351)
Name: NF17600_low_6
Description: NF17600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17600_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 14 - 336
Target Start/End: Original strand, 22704012 - 22704334
Alignment:
| Q |
14 |
caaaggtaaaaaatagatggagaagtttcactatgatgcaaataccaaaccaatgttgaatattatggccccaaaatgaatgtatcacatgactataaga |
113 |
Q |
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| T |
22704012 |
caaagataaaaagtagatggagaagtttcactatgatgcaaataccaaaccaatgttgaatattatggccccaaaatgaatgtatcacatgactataaga |
22704111 |
T |
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| Q |
114 |
tatttagcccaacaatgctgtcaaatcagagttcaagcaaactcaattttagacttcagctgatttattcactaataattttaatttcactaagaaccat |
213 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22704112 |
tatttagcccaacaatgctgtcaaatcagagctcaagcaaactcaattttagacttcagctgatttattcactaataattttaatttcactaagaaccat |
22704211 |
T |
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| Q |
214 |
aatacttaactagattgatttaaaaagtaaatcatcataatatattttcagaatccaacctcttcaaaattgagattttaggtgaaaacacgagattgat |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |
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| T |
22704212 |
aatacttaactagattgatttaaaaagtaaatcatcataatatattttcagaatccaacttcttcaaaattgagattttaggtgaaaacacaagattgat |
22704311 |
T |
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| Q |
314 |
tattatagggacttgggtataat |
336 |
Q |
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||||||||||||||||||||||| |
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| T |
22704312 |
tattatagggacttgggtataat |
22704334 |
T |
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