View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17601_low_8 (Length: 275)

Name: NF17601_low_8
Description: NF17601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17601_low_8
NF17601_low_8
[»] chr7 (24 HSPs)
chr7 (1-51)||(30566601-30566651)
chr7 (1-51)||(40302512-40302562)
chr7 (1-51)||(36518516-36518566)
chr7 (4-51)||(114491-114538)
chr7 (4-51)||(22737619-22737666)
chr7 (1-48)||(37887851-37887898)
chr7 (1-44)||(42881366-42881409)
chr7 (1-51)||(5813099-5813149)
chr7 (1-44)||(28318064-28318107)
chr7 (1-44)||(30720128-30720171)
chr7 (1-44)||(35029130-35029173)
chr7 (1-51)||(32130292-32130342)
chr7 (1-51)||(39769730-39769780)
chr7 (1-43)||(47159516-47159558)
chr7 (1-46)||(32748803-32748848)
chr7 (4-44)||(21654854-21654894)
chr7 (4-44)||(22191228-22191268)
chr7 (1-45)||(33508547-33508591)
chr7 (1-44)||(33078806-33078849)
chr7 (4-51)||(43571118-43571165)
chr7 (1-44)||(45549640-45549683)
chr7 (1-51)||(26812114-26812164)
chr7 (4-44)||(30630838-30630878)
chr7 (4-44)||(48984915-48984955)
[»] chr5 (35 HSPs)
chr5 (1-51)||(19241316-19241366)
chr5 (1-51)||(42807021-42807071)
chr5 (4-48)||(41153030-41153074)
chr5 (4-51)||(14278829-14278876)
chr5 (1-51)||(7651003-7651053)
chr5 (1-51)||(31008406-31008456)
chr5 (1-51)||(31013865-31013915)
chr5 (1-51)||(32976597-32976647)
chr5 (1-51)||(40888894-40888944)
chr5 (1-44)||(3454743-3454786)
chr5 (4-51)||(8176327-8176374)
chr5 (1-47)||(4938189-4938235)
chr5 (1-51)||(25670927-25670977)
chr5 (1-51)||(27942491-27942541)
chr5 (4-44)||(4577012-4577052)
chr5 (1-44)||(27407064-27407107)
chr5 (8-51)||(37882457-37882500)
chr5 (1-44)||(39238421-39238464)
chr5 (1-51)||(13479845-13479895)
chr5 (1-51)||(29619035-29619085)
chr5 (4-44)||(25652820-25652860)
chr5 (4-44)||(41263369-41263409)
chr5 (1-44)||(23649189-23649232)
chr5 (1-44)||(23809339-23809382)
chr5 (4-43)||(25032361-25032400)
chr5 (1-44)||(36572441-36572484)
chr5 (1-44)||(42317895-42317938)
chr5 (4-38)||(11954790-11954824)
chr5 (1-51)||(23089518-23089568)
chr5 (1-51)||(30648134-30648184)
chr5 (1-51)||(32363636-32363686)
chr5 (1-50)||(34709878-34709927)
chr5 (11-51)||(4219472-4219512)
chr5 (4-44)||(9274474-9274513)
chr5 (4-44)||(10569834-10569874)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-66)||(66093-66158)
[»] chr6 (17 HSPs)
chr6 (1-53)||(12501830-12501882)
chr6 (1-51)||(8660559-8660609)
chr6 (1-51)||(30446244-30446294)
chr6 (1-44)||(34838588-34838631)
chr6 (5-51)||(631518-631564)
chr6 (1-51)||(17961285-17961335)
chr6 (1-51)||(24348433-24348483)
chr6 (1-51)||(34328281-34328331)
chr6 (4-44)||(6380513-6380553)
chr6 (4-44)||(29428542-29428582)
chr6 (1-44)||(197811-197854)
chr6 (1-44)||(10883879-10883922)
chr6 (4-44)||(32359753-32359793)
chr6 (4-51)||(6725649-6725696)
chr6 (1-36)||(8218960-8218995)
chr6 (1-44)||(12512920-12512963)
chr6 (1-48)||(24933305-24933351)
[»] scaffold0362 (1 HSPs)
scaffold0362 (1-68)||(5344-5411)
[»] chr8 (36 HSPs)
chr8 (1-44)||(31129524-31129567)
chr8 (1-51)||(1958201-1958251)
chr8 (1-51)||(45101046-45101096)
chr8 (4-51)||(18029523-18029570)
chr8 (1-44)||(42859932-42859975)
chr8 (1-43)||(1634862-1634904)
chr8 (1-51)||(15053632-15053682)
chr8 (1-51)||(35099435-35099485)
chr8 (1-51)||(43618370-43618420)
chr8 (159-259)||(4467487-4467590)
chr8 (4-45)||(30289754-30289795)
chr8 (1-66)||(40283460-40283525)
chr8 (4-48)||(30470842-30470886)
chr8 (4-44)||(34955690-34955730)
chr8 (1-44)||(12272503-12272546)
chr8 (1-44)||(26244504-26244547)
chr8 (1-44)||(35931869-35931912)
chr8 (4-51)||(36912417-36912464)
chr8 (1-44)||(43524412-43524455)
chr8 (1-44)||(44503174-44503217)
chr8 (1-51)||(43525110-43525160)
chr8 (4-44)||(5212298-5212338)
chr8 (4-44)||(13814954-13814994)
chr8 (4-44)||(17741719-17741759)
chr8 (11-51)||(26749439-26749479)
chr8 (4-44)||(38584918-38584958)
chr8 (4-44)||(41477190-41477230)
chr8 (4-44)||(42860721-42860761)
chr8 (1-44)||(13947373-13947416)
chr8 (4-51)||(26632177-26632224)
chr8 (1-51)||(23549713-23549763)
chr8 (4-44)||(4625518-4625558)
chr8 (4-44)||(5735294-5735334)
chr8 (7-47)||(7511884-7511924)
chr8 (8-44)||(8610009-8610045)
chr8 (4-48)||(29637179-29637223)
[»] chr2 (29 HSPs)
chr2 (1-44)||(7763509-7763552)
chr2 (1-51)||(8852059-8852109)
chr2 (1-51)||(22351636-22351686)
chr2 (1-51)||(24997082-24997132)
chr2 (1-51)||(43021743-43021793)
chr2 (1-51)||(44279994-44280044)
chr2 (1-48)||(17929277-17929324)
chr2 (1-44)||(36209496-36209539)
chr2 (1-56)||(36526818-36526873)
chr2 (4-51)||(37245503-37245550)
chr2 (1-51)||(4296793-4296843)
chr2 (5-51)||(12855021-12855067)
chr2 (1-51)||(14152089-14152139)
chr2 (5-51)||(30822609-30822655)
chr2 (6-51)||(7588531-7588576)
chr2 (4-44)||(1987128-1987168)
chr2 (4-51)||(927916-927963)
chr2 (1-44)||(1073105-1073148)
chr2 (1-44)||(14382976-14383019)
chr2 (1-44)||(17485826-17485869)
chr2 (4-51)||(31193008-31193055)
chr2 (5-51)||(5146737-5146783)
chr2 (1-51)||(9117814-9117864)
chr2 (1-51)||(39490145-39490195)
chr2 (4-44)||(9074249-9074289)
chr2 (4-44)||(38901729-38901769)
chr2 (1-44)||(6362963-6363005)
chr2 (2-44)||(1308720-1308762)
chr2 (11-51)||(38997290-38997330)
[»] chr1 (42 HSPs)
chr1 (1-68)||(23092750-23092817)
chr1 (1-51)||(2478349-2478399)
chr1 (1-51)||(8468322-8468372)
chr1 (1-51)||(29523701-29523751)
chr1 (1-51)||(31468131-31468181)
chr1 (1-51)||(48388129-48388179)
chr1 (1-51)||(51494493-51494543)
chr1 (4-44)||(8464104-8464144)
chr1 (4-44)||(44334294-44334334)
chr1 (1-44)||(19578931-19578974)
chr1 (1-44)||(31159392-31159435)
chr1 (1-44)||(48404335-48404378)
chr1 (1-51)||(27630481-27630531)
chr1 (1-51)||(30878565-30878615)
chr1 (1-51)||(37420365-37420415)
chr1 (5-51)||(45239136-45239182)
chr1 (1-51)||(45362716-45362766)
chr1 (1-51)||(45456172-45456222)
chr1 (1-47)||(47300518-47300564)
chr1 (4-44)||(3755052-3755092)
chr1 (1-44)||(37822574-37822618)
chr1 (4-44)||(44451294-44451334)
chr1 (4-44)||(44651078-44651118)
chr1 (1-44)||(29919375-29919418)
chr1 (1-44)||(37646581-37646624)
chr1 (1-44)||(37691311-37691354)
chr1 (1-44)||(45623551-45623594)
chr1 (1-44)||(51520222-51520265)
chr1 (1-66)||(33164395-33164460)
chr1 (4-44)||(643846-643886)
chr1 (4-44)||(20584875-20584915)
chr1 (4-48)||(36302983-36303027)
chr1 (4-44)||(41542335-41542375)
chr1 (1-44)||(14096696-14096739)
chr1 (1-44)||(36230362-36230405)
chr1 (4-51)||(39149074-39149121)
chr1 (4-44)||(17783382-17783422)
chr1 (8-48)||(44929318-44929358)
chr1 (4-48)||(48729323-48729367)
chr1 (1-45)||(51156908-51156952)
chr1 (4-44)||(52933792-52933832)
chr1 (4-44)||(52941427-52941467)
[»] scaffold0054 (2 HSPs)
scaffold0054 (1-51)||(57764-57814)
scaffold0054 (14-48)||(55071-55105)
[»] chr4 (40 HSPs)
chr4 (1-51)||(3533328-3533378)
chr4 (1-51)||(3618474-3618524)
chr4 (1-51)||(6290601-6290651)
chr4 (1-51)||(13094411-13094461)
chr4 (1-51)||(16175036-16175086)
chr4 (1-51)||(38173556-38173606)
chr4 (1-51)||(40721036-40721086)
chr4 (1-51)||(46917532-46917582)
chr4 (1-46)||(31336375-31336420)
chr4 (1-44)||(34199290-34199333)
chr4 (1-44)||(48506627-48506670)
chr4 (1-44)||(55560500-55560543)
chr4 (1-44)||(56054025-56054068)
chr4 (1-51)||(2215303-2215353)
chr4 (1-51)||(4981510-4981560)
chr4 (1-51)||(8991784-8991834)
chr4 (1-51)||(16020848-16020898)
chr4 (1-51)||(33604658-33604708)
chr4 (1-51)||(45081433-45081483)
chr4 (4-48)||(31848798-31848842)
chr4 (1-56)||(13110557-13110612)
chr4 (1-44)||(19272791-19272834)
chr4 (1-44)||(33523278-33523321)
chr4 (1-51)||(23540447-23540497)
chr4 (1-51)||(52772755-52772804)
chr4 (10-51)||(27863716-27863757)
chr4 (8-44)||(39113783-39113819)
chr4 (4-44)||(53184120-53184160)
chr4 (4-44)||(54356920-54356960)
chr4 (4-43)||(12158147-12158186)
chr4 (1-44)||(23389950-23389993)
chr4 (1-44)||(35809171-35809214)
chr4 (2-47)||(36656566-36656608)
chr4 (8-47)||(40596790-40596829)
chr4 (1-44)||(48403921-48403964)
chr4 (1-44)||(52017352-52017395)
chr4 (1-51)||(28899333-28899383)
chr4 (1-44)||(18469388-18469432)
chr4 (8-44)||(33077901-33077937)
chr4 (8-44)||(51392239-51392275)
[»] chr3 (56 HSPs)
chr3 (1-51)||(6048717-6048767)
chr3 (1-51)||(10426452-10426502)
chr3 (1-51)||(12974670-12974720)
chr3 (1-51)||(17466517-17466567)
chr3 (1-51)||(29701684-29701734)
chr3 (1-51)||(30418450-30418500)
chr3 (1-51)||(32120459-32120509)
chr3 (1-51)||(41183276-41183326)
chr3 (1-51)||(44084311-44084361)
chr3 (1-51)||(47144175-47144225)
chr3 (1-51)||(51999258-51999308)
chr3 (1-50)||(20139363-20139412)
chr3 (1-44)||(4045989-4046032)
chr3 (4-51)||(25450658-25450705)
chr3 (1-68)||(27847394-27847461)
chr3 (1-44)||(38572175-38572218)
chr3 (4-51)||(42601763-42601810)
chr3 (4-51)||(46572949-46572996)
chr3 (1-51)||(5845161-5845211)
chr3 (5-51)||(25790800-25790846)
chr3 (1-51)||(42560903-42560953)
chr3 (1-51)||(50415851-50415901)
chr3 (1-51)||(55026741-55026791)
chr3 (4-44)||(33935000-33935040)
chr3 (4-48)||(35424033-35424077)
chr3 (4-44)||(41890543-41890583)
chr3 (4-44)||(42601529-42601569)
chr3 (4-44)||(49147312-49147352)
chr3 (4-44)||(49823194-49823234)
chr3 (4-44)||(51427109-51427149)
chr3 (1-44)||(138984-139027)
chr3 (4-47)||(744222-744265)
chr3 (1-44)||(26165575-26165618)
chr3 (1-44)||(37183858-37183901)
chr3 (4-47)||(50176109-50176152)
chr3 (1-51)||(7008057-7008107)
chr3 (14-51)||(47701097-47701134)
chr3 (1-46)||(52000083-52000128)
chr3 (4-44)||(25832748-25832788)
chr3 (4-44)||(37410443-37410483)
chr3 (1-44)||(6832393-6832436)
chr3 (4-47)||(30692436-30692478)
chr3 (8-51)||(33748687-33748730)
chr3 (1-44)||(35472647-35472690)
chr3 (4-51)||(35853216-35853263)
chr3 (4-51)||(43022650-43022697)
chr3 (1-44)||(43473899-43473942)
chr3 (4-51)||(49710413-49710460)
chr3 (1-44)||(50734025-50734068)
chr3 (1-44)||(50778787-50778830)
chr3 (1-51)||(11908021-11908071)
chr3 (1-51)||(36178725-36178775)
chr3 (5-51)||(42258319-42258365)
chr3 (1-46)||(51304345-51304390)
chr3 (8-44)||(15493848-15493884)
chr3 (4-44)||(50017062-50017102)
[»] scaffold0100 (1 HSPs)
scaffold0100 (4-44)||(30562-30602)


Alignment Details
Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30566651 - 30566601
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30566651 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaagtgggtg 30566601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40302512 - 40302562
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40302512 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaaatgggtg 40302562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36518566 - 36518516
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  36518566 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 36518516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 114538 - 114491
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  114538 taagagagagaaaatgatgtggagtgttgagaatttaaaaagtgggtg 114491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 22737619 - 22737666
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  22737619 taagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 22737666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37887898 - 37887851
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  37887898 aattaagagagataaaatgatgtggagtgttgggaattgaaaaaatgg 37887851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42881409 - 42881366
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  42881409 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 42881366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5813149 - 5813099
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  5813149 aattaagagagagaaaatgatgtgcagtgttgggaattgaaaaagtgggtg 5813099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28318064 - 28318107
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  28318064 aattaagagagagaaaatgatgtggagtgttgggaattaaaaaa 28318107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30720171 - 30720128
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  30720171 aattaagagagagaaaatgatgtggagtgttggaaattgaaaaa 30720128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35029130 - 35029173
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  35029130 aattaagagagagaaaatgatgtggaatgttgggaattgaaaaa 35029173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32130292 - 32130342
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||    
T  32130292 aattatgagagagaaaatgatgtggagtgttgggaattaaaaaagtgggtg 32130342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39769780 - 39769730
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| ||||||||||||||||||||||||||  |||||||||| ||||||    
T  39769780 aattatgagagagaaaatgatgtggagtgttggaaattgaaaaagtgggtg 39769730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47159516 - 47159558
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaa 43  Q
    |||||||||||||||||||||||||||||||| ||||| ||||    
T  47159516 aattaagagagagaaaatgatgtggagtgttgggaattaaaaa 47159558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32748848 - 32748803
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaat 46  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||||    
T  32748848 aattatgagagagaaaataatgtggagtgttgggaattgaaaaaat 32748803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 21654894 - 21654854
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  21654894 taagagagagaaaatgatgtggagtgttggaaattgaaaaa 21654854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 22191268 - 22191228
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  22191268 taagagagagaaaatgatgtggagtgttggaaattgaaaaa 22191228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33508547 - 33508591
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaa 45  Q
    |||||||||||||||||||| || |||||||| ||||||||||||    
T  33508547 aattaagagagagaaaatgacgtagagtgttgggaattgaaaaaa 33508591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33078806 - 33078849
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||| | ||||||||||| |||||||||||    
T  33078806 aattaagagagagaaaataacgtggagtgttgggaattgaaaaa 33078849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 43571118 - 43571165
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  43571118 taagagagagaaaatgatgtggagtgttgggaagagaaaaagtgggtg 43571165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45549640 - 45549683
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||    
T  45549640 aattatgagagaaaaaatgatgtggagtgttgggaattgaaaaa 45549683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26812164 - 26812114
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| || ||| |||||||| |||||||||| ||||||||||||||||||    
T  26812164 aattatgaaagataaaatgatatggagtgttgggaattgaaaaaatgggtg 26812114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 30630838 - 30630878
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||| ||||||||||||| ||||| |||||    
T  30630838 taagagagagaaaataatgtggagtgttgggaattaaaaaa 30630878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 48984955 - 48984915
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||| ||||  ||||||||||    
T  48984955 taagagagagaaaatgatgtggagcgttggaaattgaaaaa 48984915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19241366 - 19241316
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19241366 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaagtgggtg 19241316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42807021 - 42807071
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42807021 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaagtgggtg 42807071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 41153030 - 41153074
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  41153030 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 41153074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 14278876 - 14278829
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14278876 taagagagagaaaatgatgtggagtgttgggaattgaaaaaatgggtg 14278829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7651053 - 7651003
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  7651053 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaaataggtg 7651003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31008406 - 31008456
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  31008406 aattaagagagagaaaatgatgtgaagtgttgagaattgaaaaagtgggtg 31008456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31013865 - 31013915
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  31013865 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 31013915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32976597 - 32976647
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  32976597 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 32976647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40888944 - 40888894
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  40888944 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 40888894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3454786 - 3454743
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  3454786 aattatgagagagaaaatgatgtggagtgttgagaattgaaaaa 3454743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 8176327 - 8176374
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  8176327 taagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 8176374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4938235 - 4938189
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatg 47  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4938235 aattaagagagagaaaatgatgttgagtattgagaattgaaaaaatg 4938189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25670927 - 25670977
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||    
T  25670927 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 25670977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27942541 - 27942491
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  27942541 aattaagagagagaaaatgatgtggagtgttggggattgaaaaagtgggtg 27942491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 4577052 - 4577012
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  4577052 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 4577012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27407064 - 27407107
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||| ||||||||||||| |||||||||||    
T  27407064 aattaagagagagaaaataatgtggagtgttgggaattgaaaaa 27407107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 37882457 - 37882500
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  37882457 agagaaaaaatgatgtggagtgttgggaattgaaaaaatgggtg 37882500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39238464 - 39238421
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  39238464 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaa 39238421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13479845 - 13479895
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||    
T  13479845 aattatgagagagaaaatgatgtggagtgttgggaattaaaaaagtgggtg 13479895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29619035 - 29619085
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| ||||||    
T  29619035 aattatgagaaagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 29619085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 25652860 - 25652820
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  25652860 taagagagagaaaatgatgtgaagtgttgggaattgaaaaa 25652820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41263409 - 41263369
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  41263409 taagagagagaaaatgatgtggagcgttgggaattgaaaaa 41263369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23649189 - 23649232
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||| |||||||||||| |||||||||| |||||||||||    
T  23649189 aattaagaaagagaaaatgatatggagtgttgggaattgaaaaa 23649232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23809382 - 23809339
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||| |||||||||||| |||||||||| |||||||||||    
T  23809382 aattaagaaagagaaaatgatatggagtgttgggaattgaaaaa 23809339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 25032400 - 25032361
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaa 43  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  25032400 taagagagagaaaatgatgtggagtgttggaaattgaaaa 25032361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36572441 - 36572484
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  36572441 aattaagagagagaaaatgatgtggagtattggaaattgaaaaa 36572484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42317938 - 42317895
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||    
T  42317938 aattaagagagagaaaatgatatggagtgttggaaattgaaaaa 42317895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 11954824 - 11954790
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaatt 38  Q
    |||||||||||||||||||||||||||||| ||||    
T  11954824 taagagagagaaaatgatgtggagtgttgataatt 11954790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23089568 - 23089518
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  23089568 aattatgagagagaaaatgatgtgaagtgttgggaattaaaaaagtgggtg 23089518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30648134 - 30648184
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||| |||||| |||||||||| | ||||||||||| ||||||    
T  30648134 aattaagagagataaaatggtgtggagtgtagggaattgaaaaagtgggtg 30648184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32363636 - 32363686
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||| ||||||||||| |||||||||||||| |||| ||||| ||||||    
T  32363636 aattaaaagagagaaaataatgtggagtgttgaaaattaaaaaagtgggtg 32363686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34709927 - 34709878
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggt 50  Q
    |||||||||||| ||||||| ||||| |||||| |||||||||| |||||    
T  34709927 aattaagagagaaaaaatgacgtggaatgttgaaaattgaaaaagtgggt 34709878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 4219472 - 4219512
Alignment:
Q  11 gagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||| ||||||| ||||||||||| ||||||    
T  4219472 gagaaaatgatgtgaagtgttgggaattgaaaaagtgggtg 4219512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 9274474 - 9274513
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  9274474 taagagaga-aaaatgatgtggagtgttgggaattgaaaaa 9274513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 10569834 - 10569874
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||| | ||||||||||||||||||| |||||||||||    
T  10569834 taagagacaaaaaatgatgtggagtgttgggaattgaaaaa 10569874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 66093 - 66158
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggtaagaggtattgaa 66  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||    
T  66093 aattatgagagagaaaatgatgtggagtgttgagaattgaaaaagtaggtgttaaaaggtattgaa 66158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12501882 - 12501830
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggt 53  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  12501882 aattaagagagagaaaatgatgtggattgttgagaattgaaaaagtgggtggt 12501830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8660609 - 8660559
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  8660609 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 8660559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30446294 - 30446244
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  30446294 aattaagagagagaaaatgatgtggagtgttaggaattgaaaaaatgggtg 30446244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34838631 - 34838588
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  34838631 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 34838588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 631564 - 631518
Alignment:
Q  5 aagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  631564 aagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 631518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17961285 - 17961335
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  17961285 aattaagagagagaaaattatgtggagtgttgggaattgaaaaagtgggtg 17961335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24348483 - 24348433
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  24348483 aattaaaagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 24348433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34328331 - 34328281
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  34328331 aattaagagagataaaatgatgtggagtgttgggaattgaaaaagtgggtg 34328281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 6380513 - 6380553
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  6380513 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 6380553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 29428542 - 29428582
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29428542 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 29428582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 197854 - 197811
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  197854 aattaagagagagaaaatgacgtggagtgttgggaattgaaaaa 197811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10883922 - 10883879
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  10883922 aattaagagagagaaaatgatgtggagtgttggaaattgaaaaa 10883879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 32359793 - 32359753
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  32359793 taagagagagaaaatgatgtggaatgttgggaattgaaaaa 32359753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 6725649 - 6725696
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  6725649 taagagagagaaaatgatgtggagtgttgggaagagaaaaagtgggtg 6725696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8218995 - 8218960
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaa 36  Q
    |||||||||||||||||| |||||||||||||||||    
T  8218995 aattaagagagagaaaataatgtggagtgttgagaa 8218960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12512963 - 12512920
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||| ||||||||||||| |||||| ||||||||||    
T  12512963 aattaagagagaaaaaatgatgtggaatgttgaaaattgaaaaa 12512920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24933305 - 24933351
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  24933305 aattatgagagagaaaataatgtggagtgttga-aattgaaaaaatgg 24933351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5344 - 5411
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggtaagaggtattgaata 68  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| |||||| | || |||||||||||    
T  5344 aattaagaaagagaaaatgatgtggagtgttgggaattgaaaaagtgggtgttgaggggtattgaata 5411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31129524 - 31129567
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31129524 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 31129567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1958201 - 1958251
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  1958201 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 1958251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45101046 - 45101096
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  45101046 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 45101096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 18029523 - 18029570
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  18029523 taagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 18029570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42859975 - 42859932
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  42859975 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 42859932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1634862 - 1634904
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaa 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  1634862 aattatgagagagaaaatgatgtggagtgttgagaattgaaaa 1634904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15053682 - 15053632
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  15053682 aattaagagagagaaaatgatgcggagtgttgggaattgaaaaagtgggtg 15053632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35099485 - 35099435
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  35099485 aattaagagagagaaaatgatgtagagtgttgggaattgaaaaagtgggtg 35099435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43618370 - 43618420
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  43618370 aattaagagagagaaaatgatgtggagtgttgggaattgataaagtgggtg 43618420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 4467590 - 4467487
Alignment:
Q  159 tttcatgacaactaaattgct---agatattacattagtctatcccactttacgagtctgataatgcttggctataggtattgagtggtgggcactgcaa 255  Q
    |||||||||| | ||||||||   |||||||| ||  | ||||| ||||| |||||| ||||| |||||||||||||||||||||||| ||||| | |||    
T  4467590 tttcatgacagcaaaattgctgatagatattatatctgcctatctcacttaacgagtttgatattgcttggctataggtattgagtggagggcattacaa 4467491  T
Q  256 ggat 259  Q
    ||||    
T  4467490 ggat 4467487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 30289754 - 30289795
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaa 45  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  30289754 taagagagagaaaatgatgtagagtgttgagaattgaaaaaa 30289795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40283525 - 40283460
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggtaagaggtattgaa 66  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||| || | | ||||||||||    
T  40283525 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaagtggatgttgaaaggtattgaa 40283460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 30470842 - 30470886
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  30470842 taagagagagaaaatgacgtggagtgttgggaattgaaaaaatgg 30470886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 34955690 - 34955730
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  34955690 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 34955730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12272503 - 12272546
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  12272503 aattaagagagagaaaatgaagtggagtgttgaaaattgaaaaa 12272546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26244547 - 26244504
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  26244547 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaa 26244504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35931912 - 35931869
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  35931912 aattaagagagagaaaatgatgtggagtgttggaaattgaaaaa 35931869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 36912464 - 36912417
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  36912464 taagagagagaaaatgatgtagagtgttgggaattgaaaaagtgggtg 36912417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43524412 - 43524455
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  43524412 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaa 43524455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44503217 - 44503174
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  44503217 aattaagagagagaaaatgacgtggagtgttgggaattgaaaaa 44503174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43525110 - 43525160
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||| |||||||||||||||||||||||||  |||||||||| ||||||    
T  43525110 aattaaaagagagaaaatgatgtggagtgttggaaattgaaaaagtgggtg 43525160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 5212338 - 5212298
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  5212338 taagagagagaaaatgatgtggagtgttgggaattaaaaaa 5212298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 13814994 - 13814954
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  13814994 taagagagagaaaatgatgtggagtgttggaaattgaaaaa 13814954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 17741759 - 17741719
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  17741759 taagagagagaaaatgatgtggagtcttgggaattgaaaaa 17741719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 26749439 - 26749479
Alignment:
Q  11 gagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  26749439 gagaaaatgatatggagtgttgagaattaaaaaaatgggtg 26749479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 38584918 - 38584958
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  38584918 taagagagagaaaatgacgtggagtgttgggaattgaaaaa 38584958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41477230 - 41477190
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  41477230 taagagagagaaaatgacgtggagtgttgggaattgaaaaa 41477190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 42860761 - 42860721
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  42860761 taagaaagagaaaatgatgtggagtgttgggaattgaaaaa 42860721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13947416 - 13947373
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||    
T  13947416 aattatgagaaagaaaatgatgtggagtgttgggaattgaaaaa 13947373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 26632177 - 26632224
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||| |||| |||||| ||||||||||| ||||||    
T  26632177 taagagagagaaaatgacgtggcgtgttgggaattgaaaaagtgggtg 26632224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23549763 - 23549713
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| ||||||||||||  |||||||||||| ||||||||||||| ||||    
T  23549763 aattatgagagagaaaatagtgtggagtgttgggaattgaaaaaataggtg 23549713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 4625518 - 4625558
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||| || |||||||||| |||||||||||    
T  4625518 taagagagagaaaataatttggagtgttgggaattgaaaaa 4625558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 5735334 - 5735294
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||| |||| |||| ||||||||||    
T  5735334 taagagagagaaaatgatgtcgagtattgaaaattgaaaaa 5735294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 7511884 - 7511924
Alignment:
Q  7 gagagagaaaatgatgtggagtgttgagaattgaaaaaatg 47  Q
    ||||||||||||||||||||||||||  |||| ||||||||    
T  7511884 gagagagaaaatgatgtggagtgttggaaattaaaaaaatg 7511924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 8610009 - 8610045
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||| |||||||||| |||||||||||    
T  8610009 agagagaaaatgatatggagtgttgggaattgaaaaa 8610045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 29637179 - 29637223
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    ||||| ||||||||| |||||||||||||  ||||||||||||||    
T  29637179 taagaaagagaaaattatgtggagtgttggaaattgaaaaaatgg 29637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7763509 - 7763552
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7763509 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 7763552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8852109 - 8852059
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  8852109 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 8852059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22351636 - 22351686
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  22351636 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 22351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24997132 - 24997082
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  24997132 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 24997082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43021793 - 43021743
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  43021793 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 43021743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44280044 - 44279994
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  44280044 aattaagagagagaaaatgatgtggagtgttgaaaattgaaaaagtgggtg 44279994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17929277 - 17929324
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  17929277 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaaatgg 17929324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36209496 - 36209539
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  36209496 aattaagaaagagaaaatgatgtggagtgttgagaattgaaaaa 36209539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36526873 - 36526818
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggtaag 56  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||    
T  36526873 aattaagagagagaaaataatgtggagtgttgggaattgaaaaagtgggtgttaag 36526818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 37245550 - 37245503
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  37245550 taagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 37245503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4296793 - 4296843
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  4296793 aattaagagagagaaaataatgtggagtgttgggaattgaaaaagtgggtg 4296843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 12855067 - 12855021
Alignment:
Q  5 aagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  12855067 aagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 12855021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14152089 - 14152139
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  14152089 aattaaaagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 14152139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 30822609 - 30822655
Alignment:
Q  5 aagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  30822609 aagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 30822655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 7588531 - 7588576
Alignment:
Q  6 agagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  7588531 agagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 7588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 1987168 - 1987128
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  1987168 taagagatagaaaatgatgtggagtgttgagaattgaaaaa 1987128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 927916 - 927963
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  927916 taagagagagaaaatgatgtggagtgttgggaattaaaaaagtgggtg 927963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1073105 - 1073148
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  1073105 aattaagagagagaaaatgaagtggagtgttgaaaattgaaaaa 1073148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14383019 - 14382976
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  14383019 aattaagagagagaaaatgatgtggagtgttaggaattgaaaaa 14382976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17485869 - 17485826
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  17485869 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaa 17485826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 31193008 - 31193055
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||    
T  31193008 taagagagagaaaatgatgtggagtgttggaaattgaaaaaataggtg 31193055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 5146737 - 5146783
Alignment:
Q  5 aagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||    
T  5146737 aagagagagaaaatgatgtggagtgttggaaattaaaaaaatgggtg 5146783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9117864 - 9117814
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||  ||||||||||| |||||||||| ||||||    
T  9117864 aattaagagagagaaaatgaaatggagtgttgaaaattgaaaaagtgggtg 9117814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39490195 - 39490145
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||| |||||| |||||||||| ||||||||||| ||||||    
T  39490195 aattaagagagagagaatgatttggagtgttgggaattgaaaaagtgggtg 39490145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 9074249 - 9074289
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  9074249 taagagagagaaaatgatgtggagtgttgggaattaaaaaa 9074289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 38901769 - 38901729
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  38901769 taagagagagaaaatgatgtggagtgtttggaattgaaaaa 38901729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6363005 - 6362963
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  6363005 aattaagagagagaaaatgatgtagagtgttg-gaattgaaaaa 6362963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 1308720 - 1308762
Alignment:
Q  2 attaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||| ||||||||||||||||||||||||||  ||||||||||    
T  1308720 attatgagagagaaaatgatgtggagtgttggaaattgaaaaa 1308762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 38997290 - 38997330
Alignment:
Q  11 gagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||| |||||| ||||||||||| ||||||    
T  38997290 gagaaaatgatgtggtgtgttgcgaattgaaaaagtgggtg 38997330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23092817 - 23092750
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggtaagaggtattgaata 68  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||||| | || |||||||||||    
T  23092817 aattaagagagagaaaatgacgtggagtgttgggaattgaaaaagtgggtgttgaggggtattgaata 23092750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2478349 - 2478399
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  2478349 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 2478399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8468372 - 8468322
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  8468372 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 8468322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29523751 - 29523701
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  29523751 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 29523701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31468181 - 31468131
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  31468181 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 31468131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48388129 - 48388179
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  48388129 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 48388179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51494493 - 51494543
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  51494493 aattaagagagagaaaatgatgtggagtgttgagaattaaaaaagtgggtg 51494543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 8464144 - 8464104
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8464144 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 8464104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 44334334 - 44334294
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44334334 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44334294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19578931 - 19578974
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  19578931 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 19578974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31159435 - 31159392
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  31159435 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 31159392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48404378 - 48404335
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  48404378 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 48404335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27630481 - 27630531
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  27630481 aattaagagagataaaatgatgtggagtgttgggaattgaaaaagtgggtg 27630531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30878565 - 30878615
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  30878565 aattaagagagagaaaatgatgtggagtgttggaaattgaaaaagtgggtg 30878615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37420365 - 37420415
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  37420365 aattaagagagataaaatgatgtggagtgttgggaattgaaaaagtgggtg 37420415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 45239182 - 45239136
Alignment:
Q  5 aagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  45239182 aagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 45239136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45362766 - 45362716
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  45362766 aattaatagagagaaagtgatttggagtgttgagaattgaaaaaatgggtg 45362716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45456172 - 45456222
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  45456172 aattaagagagagaaaattatgtggagtgttgggaattgaaaaagtgggtg 45456222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47300518 - 47300564
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatg 47  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||    
T  47300518 aattaaaagagagaaaatgatgtggagtgctgagaattgaaaaaatg 47300564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 3755052 - 3755092
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  3755052 taagagagagaaaatgatgtagagtgttgagaattgaaaaa 3755092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37822618 - 37822574
Alignment:
Q  1 aattaagag-agagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  37822618 aattaagaggagagaaaatgatgtggagtgttgagaattgaaaaa 37822574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 44451294 - 44451334
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  44451294 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 44451334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 44651118 - 44651078
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  44651118 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 44651078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29919418 - 29919375
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  29919418 aattaagagagagaaaatgatatggagtgttgggaattgaaaaa 29919375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37646581 - 37646624
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  37646581 aattaagagagagaaaatgatgtggagtgttgggaattaaaaaa 37646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37691311 - 37691354
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||| ||||||||||||| |||||||||||    
T  37691311 aattaagagagagaaaataatgtggagtgttgggaattgaaaaa 37691354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45623551 - 45623594
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  45623551 aattaagagagagaaaatgatgtggagtgttaggaattgaaaaa 45623594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51520265 - 51520222
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  51520265 aattaagagagaaaaaatgatgtggagtgttgaaaattgaaaaa 51520222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33164460 - 33164395
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggtaagaggtattgaa 66  Q
    |||||||||||| ||||| || |||| ||||| ||||||||||| |||||| ||| ||||||||||    
T  33164460 aattaagagagataaaataatctggaatgttgggaattgaaaaagtgggtgttaaaaggtattgaa 33164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 643846 - 643886
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  643846 taagagagagaaaatgacgtggagtgttgggaattgaaaaa 643886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 20584875 - 20584915
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  20584875 taagagtgagaaaatgatgtggagtgttgggaattgaaaaa 20584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 36303027 - 36302983
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||    
T  36303027 taagaaagagaaaataatgtggagtgttgaaaattgaaaaaatgg 36302983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41542375 - 41542335
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  41542375 taagagagagaatatgatgtggagtgttgggaattgaaaaa 41542335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14096739 - 14096696
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||| |||||||| |||||||||| |||||||||||    
T  14096739 aattaagagagataaaatgatttggagtgttgggaattgaaaaa 14096696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36230405 - 36230362
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||    
T  36230405 aattaagagagataaaatgatgtgaagtgttgggaattgaaaaa 36230362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 39149121 - 39149074
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||||||||||| ||||||||||||  |||||||||||||    
T  39149121 taagatagagaaaatgatgtagagtgttgagaagagaaaaaatgggtg 39149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 17783422 - 17783382
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||| ||||| ||||| |||||    
T  17783422 taagagagagaaaatgatgtggaatgttgggaattaaaaaa 17783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 44929318 - 44929358
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    |||||||||||||| || | |||||||||||||||||||||    
T  44929318 agagagaaaatgatttgaaatgttgagaattgaaaaaatgg 44929358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 48729367 - 48729323
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    ||||| ||||||||||||||| |||||| | ||||||||||||||    
T  48729367 taagaaagagaaaatgatgtgaagtgttaaaaattgaaaaaatgg 48729323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51156908 - 51156952
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaa 45  Q
    ||||| ||||||||||||||  ||||||||||| |||||||||||    
T  51156908 aattatgagagagaaaatgacatggagtgttgaaaattgaaaaaa 51156952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 52933792 - 52933832
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||| ||||||||||  |||||||||||    
T  52933792 taagagagagaaaatgacgtggagtgttaggaattgaaaaa 52933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 52941427 - 52941467
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||| ||||||||||  |||||||||||    
T  52941427 taagagagagaaaatgacgtggagtgttaggaattgaaaaa 52941467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 57764 - 57814
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  57764 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 57814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 55105 - 55071
Alignment:
Q  14 aaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    ||||||||| |||||||||||||||||||||||||    
T  55105 aaaatgatgcggagtgttgagaattgaaaaaatgg 55071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3533328 - 3533378
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  3533328 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 3533378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3618474 - 3618524
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  3618474 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 3618524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6290651 - 6290601
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6290651 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 6290601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13094411 - 13094461
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  13094411 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaaatgggtg 13094461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16175036 - 16175086
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  16175036 aattaagagtgagaaaatgatgtggagtgttgaaaattgaaaaaatgggtg 16175086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38173606 - 38173556
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  38173606 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 38173556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40721086 - 40721036
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  40721086 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 40721036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46917532 - 46917582
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  46917532 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 46917582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31336375 - 31336420
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaat 46  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  31336375 aattaagagagagaaaatgacgtggagtgttgagaattgaaaaaat 31336420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34199290 - 34199333
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  34199290 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 34199333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48506627 - 48506670
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  48506627 aattaagagagagaaaatgatgtggagtgttgaaaattgaaaaa 48506670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 55560500 - 55560543
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  55560500 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 55560543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 56054068 - 56054025
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  56054068 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 56054025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2215303 - 2215353
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  2215303 aattaagagagagaaaattatgtggagtgttgggaattgaaaaagtgggtg 2215353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4981560 - 4981510
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||    
T  4981560 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 4981510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8991834 - 8991784
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  8991834 aattaagagagagaaaatgatgtggagtgttgggaattcaaaaagtgggtg 8991784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16020898 - 16020848
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  16020898 aattaagagagagaaaataatgtggagtgttgggaattgaaaaagtgggtg 16020848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33604708 - 33604658
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  33604708 aattaagatagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 33604658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45081433 - 45081483
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||    
T  45081433 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 45081483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 31848798 - 31848842
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  31848798 taagagagagaaaatgatgtggagtgttggaaattgaaaaaatgg 31848842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13110612 - 13110557
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggtaag 56  Q
    |||||||||||| |||||| |||||||||||| ||||||||||| |||||| ||||    
T  13110612 aattaagagagaaaaaatgttgtggagtgttgggaattgaaaaagtgggtgttaag 13110557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19272834 - 19272791
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  19272834 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaa 19272791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33523321 - 33523278
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  33523321 aattaagagagagaaaatgatgtggaatgttgggaattgaaaaa 33523278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23540447 - 23540497
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||| ||||||||  |||||||||| ||||||    
T  23540447 aattaagagagagaaaatgatgttgagtgttggaaattgaaaaagtgggtg 23540497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52772804 - 52772755
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  52772804 aattaaaagagagaaaataatgtggagtgtt-agaattgaaaaaatgggtg 52772755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 27863757 - 27863716
Alignment:
Q  10 agagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  27863757 agagaaaatgacgtggagtgttgagaattgaaaaaataggtg 27863716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 39113783 - 39113819
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||| |||||||||||    
T  39113783 agagagaaaatgatgtggagtgttgggaattgaaaaa 39113819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 53184120 - 53184160
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  53184120 taagagagagaaaatgatgtgaagtgttgggaattgaaaaa 53184160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 54356920 - 54356960
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  54356920 taagagaaagaaaatgatgtggagtgttgggaattgaaaaa 54356960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 12158186 - 12158147
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaa 43  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  12158186 taagagagagaaaatgatgtggagtgttgggaatcgaaaa 12158147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23389950 - 23389993
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||    
T  23389950 aattatgagagagaaaataatgtggagtgttgggaattgaaaaa 23389993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35809214 - 35809171
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||    
T  35809214 aattatgagagagaaaatgatgtggaatgttgggaattgaaaaa 35809171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 36656608 - 36656566
Alignment:
Q  2 attaagagagagaaaatgatgtggagtgttgagaattgaaaaaatg 47  Q
    |||||||||||||||||||||||||||||   ||||||||||||||    
T  36656608 attaagagagagaaaatgatgtggagtgt---gaattgaaaaaatg 36656566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 40596790 - 40596829
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaaatg 47  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  40596790 agagagaaaatgacgtggagtgttgaaaattgaaaaaatg 40596829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48403921 - 48403964
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||    
T  48403921 aattatgagagagaaaatgatgtggagtgttggaaattgaaaaa 48403964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52017395 - 52017352
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||| |||||||  |||||||||||    
T  52017395 aattaagagagagaaaatgatgttgagtgttaggaattgaaaaa 52017352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28899383 - 28899333
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||| |||||||| | ||| ||||||||||| ||||||    
T  28899383 aattaagagagagaaaacgatgtggaatattgggaattgaaaaagtgggtg 28899333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18469388 - 18469432
Alignment:
Q  1 aattaagagagagaaaa-tgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  18469388 aattaagagagaaaaaaatgatgtggagtgttgggaattgaaaaa 18469432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 33077901 - 33077937
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||  ||||||||||    
T  33077901 agagagaaaatgatgtggagtgttggaaattgaaaaa 33077937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 51392275 - 51392239
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  51392275 agagaaaaaatgatgtggagtgttgagaattaaaaaa 51392239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6048717 - 6048767
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6048717 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 6048767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10426452 - 10426502
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  10426452 aattaaaagagagaaaatgatgtggagtgttgggaattgaaaaaatgggtg 10426502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12974720 - 12974670
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  12974720 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 12974670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17466567 - 17466517
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  17466567 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 17466517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29701734 - 29701684
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  29701734 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 29701684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30418450 - 30418500
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  30418450 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 30418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32120459 - 32120509
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  32120459 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 32120509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41183326 - 41183276
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  41183326 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 41183276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44084361 - 44084311
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  44084361 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 44084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47144225 - 47144175
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  47144225 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 47144175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51999258 - 51999308
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  51999258 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 51999308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20139412 - 20139363
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggt 50  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  20139412 aattaagagagagaaaatgatgtgaagtgttgagaattgaaaaagtgggt 20139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4046032 - 4045989
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  4046032 aattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 4045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 25450658 - 25450705
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25450658 taagagagagaaaatgatgtggagcgttgggaattgaaaaaatgggtg 25450705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27847461 - 27847394
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtggtaagaggtattgaata 68  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||| || | || |||||||||||    
T  27847461 aattaagagagagaaaatgatgtggagtgttggaaattgaaaaagtggatgttgaggggtattgaata 27847394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38572175 - 38572218
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  38572175 aattaagagagagaaaataatgtggagtgttgagaattgaaaaa 38572218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 42601810 - 42601763
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  42601810 taagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 42601763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 46572949 - 46572996
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  46572949 taagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 46572996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5845161 - 5845211
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  5845161 aattaagagagataaaatgatgtggagtgttgggaattgaaaaagtgggtg 5845211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 25790800 - 25790846
Alignment:
Q  5 aagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  25790800 aagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 25790846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42560953 - 42560903
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  42560953 aattaagagagagaaaatgatgtggaatgttgggaattgaaaaagtgggtg 42560903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50415851 - 50415901
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  50415851 aattaagagagagaaaatgatgtggagtgttggaaattgaaaaagtgggtg 50415901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 55026791 - 55026741
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  55026791 aattaagagagagaaaatgaagtgaagtgttgaaaattgaaaaaatgggtg 55026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 33935040 - 33935000
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  33935040 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 33935000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 35424033 - 35424077
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgg 48  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||    
T  35424033 taagagagaaaaaatgatgtggagtgttgggaattgaaaaaatgg 35424077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41890583 - 41890543
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  41890583 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 41890543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 42601529 - 42601569
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  42601529 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 42601569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 49147312 - 49147352
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  49147312 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 49147352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 49823194 - 49823234
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  49823194 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 49823234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 51427149 - 51427109
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  51427149 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 51427109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 139027 - 138984
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  139027 aattaagagagacaaaatgatgtggagtgttgggaattgaaaaa 138984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 744265 - 744222
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatg 47  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  744265 taagagagagaaaatgatgtggagtgttggtaattgaaaaaatg 744222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26165575 - 26165618
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  26165575 aattatgagagagaaaatgatgtggagtgttgggaattgaaaaa 26165618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37183858 - 37183901
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  37183858 aattaagagagagaaaatgatgtggagtgttaggaattgaaaaa 37183901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 50176109 - 50176152
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatg 47  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  50176109 taagagagataaaatgatgtggagtgttgggaattgaaaaaatg 50176152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7008107 - 7008057
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||| ||||||||  |||||||||| ||||||    
T  7008107 aattaagagagagaaaatgatgtagagtgttggaaattgaaaaagtgggtg 7008057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 47701097 - 47701134
Alignment:
Q  14 aaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  47701097 aaaatgatgtggagtgttgagaattgaaaaagtgggtg 47701134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52000083 - 52000128
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaat 46  Q
    ||||| |||||||||||||||||||||||||| ||||| |||||||    
T  52000083 aattatgagagagaaaatgatgtggagtgttgggaattaaaaaaat 52000128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 25832748 - 25832788
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  25832748 taagagagagaaaatgatgtgaagtgttgggaattgaaaaa 25832788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 37410443 - 37410483
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  37410443 taagagagagaaaatgatgtggagtattgggaattgaaaaa 37410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6832436 - 6832393
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||    
T  6832436 aattaaaagaaagaaaatgatgtggagtgttgggaattgaaaaa 6832393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 30692436 - 30692478
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatg 47  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  30692436 taagagagagaaaatgatgttgagtgttga-aattgaaaaaatg 30692478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 33748730 - 33748687
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  33748730 agagagaaaatgatgtggagtgttggaaattgaaaaaataggtg 33748687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35472647 - 35472690
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||    
T  35472647 aattatgagagagaaaataatgtggagtgttgggaattgaaaaa 35472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 35853216 - 35853263
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  35853216 taagagagagaaaatgatgtggagtgttgggaagagaaaaagtgggtg 35853263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 43022697 - 43022650
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  43022697 taagagagagaaaatgatgtggagtgttgggaagagaaaaagtgggtg 43022650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43473942 - 43473899
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||    
T  43473942 aattaagagagagaaaatgatctggaatgttgggaattgaaaaa 43473899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 49710413 - 49710460
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  49710413 taagagagagaaaatgatgtggagtgttgggaagagaaaaagtgggtg 49710460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50734068 - 50734025
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  50734068 aattaagagagagaaaatgatgtggagttttggaaattgaaaaa 50734025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50778787 - 50778830
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  50778787 aattaagagagagaaaatgatgtggagttttggaaattgaaaaa 50778830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11908071 - 11908021
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| |||||| |||||||||||||||||||  |||||||||| ||||||    
T  11908071 aattatgagagaaaaaatgatgtggagtgttggaaattgaaaaagtgggtg 11908021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36178725 - 36178775
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    ||||| ||||||||||||||| || ||||||| ||||||||||| ||||||    
T  36178725 aattatgagagagaaaatgatttgaagtgttgggaattgaaaaagtgggtg 36178775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 42258365 - 42258319
Alignment:
Q  5 aagagagagaaaatgatgtggagtgttgagaattgaaaaaatgggtg 51  Q
    |||||||||||||||||||||||||||| |||  |||||| ||||||    
T  42258365 aagagagagaaaatgatgtggagtgttgggaagagaaaaagtgggtg 42258319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 51304390 - 51304345
Alignment:
Q  1 aattaagagagagaaaatgatgtggagtgttgagaattgaaaaaat 46  Q
    ||||| || ||||||||||| |||||||||||| ||||||||||||    
T  51304390 aattatgatagagaaaatgacgtggagtgttgaaaattgaaaaaat 51304345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 15493848 - 15493884
Alignment:
Q  8 agagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  15493848 agagagaaagtgatgtggagtgttgggaattgaaaaa 15493884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 50017102 - 50017062
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||| |||||||||||||| |||||||| |||||||||||    
T  50017102 taagaaagagaaaatgatgtagagtgttgggaattgaaaaa 50017062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 30562 - 30602
Alignment:
Q  4 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 44  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  30562 taagagagagaaaattatatggagtgttgagaattgaaaaa 30602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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