View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17603_high_10 (Length: 262)
Name: NF17603_high_10
Description: NF17603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17603_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 45348807 - 45348556
Alignment:
| Q |
1 |
cttttttataaaaataaataattgaaaatgcatgggaagcatgcatgaataattgaatacta----tatagtatacctgaaaaattgagttgtgctggct |
96 |
Q |
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| T |
45348807 |
cttttttataaaaataaataattgaaaatgcatgggaagcatgcatgaataattgaatactacttatatagtatacctgaaaaattgagttgtgctggct |
45348708 |
T |
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| Q |
97 |
tttaataaagaaatggaagagagataggtcatctaatgaggtatttctaaagagaatgtaatggatttatacataaaaaatgaaggaaacaacattcttt |
196 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
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| T |
45348707 |
ttcaataaagaaatggaagagagataggtcatctaatgaggtatttctaaagagaatgtaatggatttatacataaaaaatgaagta---aacattcttt |
45348611 |
T |
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| Q |
197 |
ggtcttcgtctatgggtagtgtcaacgcacaaaaaagtcttctaatttggttcat |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45348610 |
ggtcttcgtctatgggtagtgtcaacgcacaaaaaagtcttctaatttggttcat |
45348556 |
T |
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