View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17603_high_11 (Length: 255)
Name: NF17603_high_11
Description: NF17603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17603_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 38247328 - 38247549
Alignment:
| Q |
7 |
ataaagacttcatttgtaagtcattggtagattcactcattatccttcaacatatatctctgaagttgatggttgattgctttaagattaatctaaatgg |
106 |
Q |
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| T |
38247328 |
ataaagacttcatttgtaagtcattggtagattcactcattatccttcaacatatatctctgaagttgatggttgattgctttaagattaatctaaatgg |
38247427 |
T |
|
| Q |
107 |
ctttatcgaatctttgttagtgaaagtcaaatttccactcattggatatcaactagtcaaatagtagcaattagcttcagcagctgttaggcctctgaat |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38247428 |
ctttatcgaatctttgttagtgaaagtcaaatttccactcattggatatcaactagtcaaatagtagcaattagcttcagcagctgttaggcctctgaat |
38247527 |
T |
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| Q |
207 |
cattctcttcatagacagtacc |
228 |
Q |
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|||||||||||||||||||||| |
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| T |
38247528 |
cattctcttcatagacagtacc |
38247549 |
T |
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