View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17604_low_25 (Length: 213)
Name: NF17604_low_25
Description: NF17604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17604_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 22640163 - 22639983
Alignment:
| Q |
1 |
cgcagccaaaagcgatgttggtggccggtggggtggggtggtgtggaggaggcacaatgagcaggacacataaaccagagtgtagaaagcagaacacaga |
100 |
Q |
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| T |
22640163 |
cgcagccaaaagcgatgttggtggccggtggggtgg-----tgtggaggaggcacaatgagcagaacacataaaccagagtgtagaaagcagaacacaga |
22640069 |
T |
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| Q |
101 |
aggttacacaaggtttttcaaaagaccctacttgaaagatatggcgccctcatgagagggtttttctttcaactaaatcgaacaca |
186 |
Q |
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||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
22640068 |
aggttacacaaagtttttaaaaagaccctacttgaaagatatggtgccctcatgagagggtttttctttcaactaaatcgaacaca |
22639983 |
T |
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