View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17605_low_13 (Length: 393)
Name: NF17605_low_13
Description: NF17605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17605_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 6 - 378
Target Start/End: Original strand, 45682656 - 45683028
Alignment:
| Q |
6 |
agcagcacagaacaattcataacaagttaaacaccacaacactagaattggaatttgattgcttcaatgacatcatgtatgacatgacatgattgtaata |
105 |
Q |
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| T |
45682656 |
agcagcagagaacaattcataacaagttaaacaccataacactagaattggaatttgattgcttcaatgacatcatgtatgacatgacatgattgtaata |
45682755 |
T |
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| Q |
106 |
ggatcagttcagttataaaatgtgtcattgatcttcgtattctttattgactgcatgacgctaataatttagttttattacatcaaaaataatattcata |
205 |
Q |
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| T |
45682756 |
ggatcagttcagttataaaatgtgtcattgatcttcgtattctttattgactgcatgacgctaataatttggttttattacatcaaaaataatattcata |
45682855 |
T |
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| Q |
206 |
tagtcttcnnnnnnncttgctataatcttgcatttattttgcaaagcctatcttatcatgtgggaggctttcataactaacaagcagaactaattaagta |
305 |
Q |
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| T |
45682856 |
tagtcttcaaaaaaacttactataatcttgcatttattttgcaaagcctatcttatcatgtgggaggctttcataactaacaagcagtactaattaagta |
45682955 |
T |
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| Q |
306 |
taaattattttaatcattttaacaattgtaaacaatggtatccaaataaagcaaaaggtggtttgaaagcatt |
378 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45682956 |
gaaactattttaatcattttaacaattgtaaacaatggtatccaaataaagcaaaaggtggtttgaaagcatt |
45683028 |
T |
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