View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17607_high_1 (Length: 648)
Name: NF17607_high_1
Description: NF17607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17607_high_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 591; Significance: 0; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 591; E-Value: 0
Query Start/End: Original strand, 1 - 632
Target Start/End: Original strand, 16617307 - 16617938
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatcttgctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtggtgagaccccaccttccggactaataa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
16617307 |
aacaaatcattgcaagtcataatcttgctgatgaaaatacatcaatatcaaatgtaattgaaacacttcagtggtgagaccccaccttccggactagtaa |
16617406 |
T |
|
| Q |
101 |
aggttggtatttcttcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcaggcgacatagatgttatctgnnnnnnntatca |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
16617407 |
aggttggtatttcgtcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcaggcgacatagatgttatctgaaaaaaatatca |
16617506 |
T |
|
| Q |
201 |
gattcattgaatttactatgtatcagcactcaacttttatgagtcaatgaaaaaataaataaggtgcaagcacaagtttataggcctaccacttttatca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16617507 |
gattcattgaatttactatgtatcagcactcaacttttatgagtcaatgaaaaaataaataaggtgcaagcacaagtttataggcctaccacttttatca |
16617606 |
T |
|
| Q |
301 |
atctttgcatttcaggacatagctcttcagaaccaagagtaggtttctgagaatcttgattttgattattgctttcttctttcaagggtgaaatcccctg |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
16617607 |
atctttgcatttcaggacatagctcttcagaaccaagagtaggtttctgagaatcttgattttgattattgctttcttctttcaagggtgaaatcctctg |
16617706 |
T |
|
| Q |
401 |
agtgttggcgtgtttaccaaatgcttcagtttctgagatccttggagcgttgttgcttacaccaaatccttgcaatgaaatgtttgtcttctgttctaca |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16617707 |
agtgttggcgtgtttaccaaatgcttcagtttctgagatccttggagcgttgttgcttacaccaaatccttgcaatgaaatgtttgtcttctgttctaca |
16617806 |
T |
|
| Q |
501 |
gcattgccgggacctaagattgaaatatatagcaaataaatgttttccagcaacctcatataggtcatttaagaatctacaaagaagtgtcaactaatgg |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16617807 |
gcattgccgggacctaagattgaaatatatagcaaataaatgttttccagcaacctcatataggtcatttaagaatctacaaagaagtgtcaactaatgg |
16617906 |
T |
|
| Q |
601 |
ttaccttttacgatcgatggtgggtttataat |
632 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
16617907 |
ttaccttttacgatcgatggtgggtttataat |
16617938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 632
Target Start/End: Original strand, 16638512 - 16639147
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatcttgctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtggtgagaccccaccttccggactaataa |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || || |||||||| ||||| ||||| |||||||| |||||||||| |
|
|
| T |
16638512 |
aacaaatcattgcaagtcataatctagctgatgaaaatgcatcaatatcaaatttagttcaaacactttagtggcgagactccaccttcgggactaataa |
16638611 |
T |
|
| Q |
101 |
aggttggtatttcttcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcaggcgacatagatgttatctgnnnnnnn-tatc |
199 |
Q |
| |
|
||||||||||||| || |||| ||| ||||||||||| || || || |||||||||| |||||| ||| || |||||||| ||||| |||| |
|
|
| T |
16638612 |
aggttggtatttcatcgttcatacgaacaaccttttctatatctccgactgctgcacgccgtgcttgaggtgaaatagatgtcatctgaaaaaaaatatc |
16638711 |
T |
|
| Q |
200 |
agattcattgaatttactatgtatcagcactcaacttttatgagtcaatgaaaaaataaataaggtgcaagcacaa--gtttataggcctaccactttta |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| | | ||| || ||||||||||||||| |||| | |
|
|
| T |
16638712 |
agattcattgaatttactatgtatcagcactcaacttttacgagtcaatgacaaaatcaataaggggaaggcataatagtttataggcctaccgctttaa |
16638811 |
T |
|
| Q |
298 |
tcaatctttgcatttcaggacatagctcttcagaaccaagagtaggtttctgagaatcttgattttgattattgctttcttctttcaagggtgaaatccc |
397 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||||| |
|
|
| T |
16638812 |
tcaatcgttgcatttcaggacttagctcttcagaaccgagagtaggtttctgagaaacttgattatgattattgatttcttctatcaatggtgaaatcct |
16638911 |
T |
|
| Q |
398 |
ctgagtgttggcgtgtttaccaaatgcttcagtttctgagatccttggagcgttgttgcttacaccaaatccttgcaatgaaatgtttgtcttctgttct |
497 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| | ||| |||||||||| ||||||| |
|
|
| T |
16638912 |
ctgagtgttggtgtgtttaccaaatgcttcagtttctgagatccttggagcattgttgcttacaccaattccttggagtgatatgtttgtctgctgttct |
16639011 |
T |
|
| Q |
498 |
acagcattgccgggacctaagattgaaatatata-gcaaataaatgttttccagcaacctcatataggtcatttaagaatctacaaagaagtgtcaacta |
596 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
16639012 |
acagcattgccgggacctaagattgaaatatatacgtaaataaatgttttccagcaatctcatataggtcatttaagaatctacaaagacgtgttaacta |
16639111 |
T |
|
| Q |
597 |
atggttaccttttacgatcgatggtgggtttataat |
632 |
Q |
| |
|
||||||||||||||||| ||| ||| |||||||||| |
|
|
| T |
16639112 |
atggttaccttttacgaccgacggttggtttataat |
16639147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 631
Target Start/End: Original strand, 16629631 - 16630266
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatcttgctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtggtgagaccccaccttccggactaataa |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || || |||||||| ||||| ||||| |||||||| |||||||||| |
|
|
| T |
16629631 |
aacaaatcattgcaagtcataatctagctgatgaaaatgcatcaatatcaaatttagttcaaacactttagtggcgagactccaccttcgggactaataa |
16629730 |
T |
|
| Q |
101 |
aggttggtatttcttcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcaggcgacatagatgttatctgnnnnnnn--tat |
198 |
Q |
| |
|
||||||||||||| || |||| ||| ||||||||||| || || || |||||||||| ||||||| ||| || |||| ||| ||||| ||| |
|
|
| T |
16629731 |
aggttggtatttcatcgttcatacgaacaaccttttctatatctccgactgctgcacccagtgcttgaggtgaaatagttgtcatctgaaaaaaaaatat |
16629830 |
T |
|
| Q |
199 |
cagattcattgaatttactatgtatcagcactcaacttttatgagtcaatgaaaaaataaataaggtgcaagcacaa--gtttataggcctaccactttt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||||| ||| ||| || ||||||||||| ||| |||| |
|
|
| T |
16629831 |
cagattcattgaatttactatgtatcagcactcaacttttacgagttgattacaaaataaataaggagcaggcataaaagtttataggccaaccgcttta |
16629930 |
T |
|
| Q |
297 |
atcaatctttgcatttcaggacatagctcttcagaaccaagagtaggtttctgagaatcttgattttgattattgctttcttctttcaagggtgaaatcc |
396 |
Q |
| |
|
||||||| |||||||| ||||| | ||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||| |||| |||||||| | |
|
|
| T |
16629931 |
atcaatcgttgcatttgaggactttgctcttcagaaccgagagtaggtttctgacaaacttgattatgattattgctttcttctatcaatggtgaaattc |
16630030 |
T |
|
| Q |
397 |
cctgagtgttggcgtgtttaccaaatgcttcagtttctgagatccttggagcgttgttgcttacaccaaatccttgcaatgaaatgtttgtcttctgttc |
496 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||||||| |||||| |
|
|
| T |
16630031 |
tctgagtgttggtgtgtgcaccaaatgcttcagtttctgagatccttggagcgttgttgcttacaccaattccttggagtgatatgtttgtctgctgttc |
16630130 |
T |
|
| Q |
497 |
tacagcattgccgggacctaagattgaaatatata-gcaaataaatgttttccagcaacctcatataggtcatttaagaatctacaaagaagtgtcaact |
595 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| |
|
|
| T |
16630131 |
tacagcattgccgggacctaagattgaaatatatacgtaaataaatgttttccagcaacctcatacaggtcatttaagaatctacaaagatgtgttaact |
16630230 |
T |
|
| Q |
596 |
aatggttaccttttacgatcgatggtgggtttataa |
631 |
Q |
| |
|
|||| ||||||||||||| ||| ||| ||||||||| |
|
|
| T |
16630231 |
aatgattaccttttacgaccgacggttggtttataa |
16630266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 273 - 408
Target Start/End: Complemental strand, 15110399 - 15110264
Alignment:
| Q |
273 |
caagtttataggcctaccacttttatcaatctttgcatttcaggac--atagctcttcagaaccaagagtaggtttctgagaatcttgattttgattatt |
370 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||| ||| ||| || |||||||||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
15110399 |
caagattataggcctaccacttcaatcaatctttgtattgcagtacttatagctcttcagaacc--gagtaggtttctgagaatcttgattctgattatt |
15110302 |
T |
|
| Q |
371 |
gctttcttctttcaagggtgaaatcccctgagtgttgg |
408 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
15110301 |
gctttgttctttcaagggtgaaatcctctgagtgttgg |
15110264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 196 - 485
Target Start/End: Original strand, 16793190 - 16793476
Alignment:
| Q |
196 |
tatcagattcattgaatttactatgtatcagcactcaacttttatgagtcaatgaaaaaataaataaggtgcaagcacaagttt-ataggcctaccactt |
294 |
Q |
| |
|
||||| ||||| |||||||||| |||||| ||||||||||||| |||| ||||| |||| |||||| | |||||||||| | ||||| ||||||| |
|
|
| T |
16793190 |
tatcaaattcaaagaatttactacgtatcaacactcaacttttacgagttaatgagaaaacaaataaag-----gcacaagttttagaggccaaccactt |
16793284 |
T |
|
| Q |
295 |
ttatcaatctttgcatttcaggacatagctcttcagaaccaagagtaggtttctgagaatcttgattttgattattgctttcttctttcaagggtgaaat |
394 |
Q |
| |
|
| ||| || || | | ||| || | |||||| | ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||| |
|
|
| T |
16793285 |
taatcggtcgctgtactgcagaactttgctctttaaaaccaagagtaggtttccgagaatcttgattttgattattggtttctttaatcaagggagaaat |
16793384 |
T |
|
| Q |
395 |
cccctgagtgttggcgtg--tttaccaaatgcttcagtttctgagatccttggagcgttgttgcttacaccaaatccttgcaatgaaatgttt |
485 |
Q |
| |
|
|| |||||||||| ||| | ||||||||||||||||| |||| || ||| |||||||| ||||||||| ||||||||| | |||||||||| |
|
|
| T |
16793385 |
cctttgagtgttggtgtgtatctaccaaatgcttcagttgctgaaat-ctttgagcgttgatgcttacactaaatccttggagtgaaatgttt |
16793476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16629323 - 16629413
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatcttgctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtggtgagaccccaccttccg |
91 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||| |||||||||||||| || |||||||| ||| | ||||| |||||||||| |
|
|
| T |
16629323 |
aacaaatcattgcaagtcataatcttgcagaggaaaatgcatcaatatcaaatgtagttcaaacacttaagtagcgagactccaccttccg |
16629413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16638204 - 16638294
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatcttgctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtggtgagaccccaccttccg |
91 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||| |||||||||||||| || |||||||| ||| | ||||| |||||||||| |
|
|
| T |
16638204 |
aacaaatcattgcaagtcataatcttgcagaggaaaatgcatcaatatcaaatgtagttcaaacacttaagtagcgagactccaccttccg |
16638294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16629014 - 16629106
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatctt-gctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtggtgagaccccaccttccgg |
92 |
Q |
| |
|
||||||||||| |||||||||||||| | ||||||||||| | |||||||||||||| || |||||||| || | ||||| ||||||||||| |
|
|
| T |
16629014 |
aacaaatcatttcaagtcataatcttagttgatgaaaatgaatcaatatcaaatgtagttcaaacactttagcgaagagactccaccttccgg |
16629106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16637895 - 16637987
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatctt-gctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtggtgagaccccaccttccgg |
92 |
Q |
| |
|
||||||||||| |||||||||||||| | ||||||||||| | |||||||||||||| || |||||||| || | ||||| ||||||||||| |
|
|
| T |
16637895 |
aacaaatcatttcaagtcataatcttagttgatgaaaatgaatcaatatcaaatgtagttcaaacactttagcgaagagactccaccttccgg |
16637987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16791029 - 16791102
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatcttgctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtgg |
74 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||||||||| ||||| |||||||||| ||| |||| ||||| |
|
|
| T |
16791029 |
aacaaataattgcaagtcactatcttgctcatgaaaatgcatcaataataaatgtaatttaaatactttagtgg |
16791102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16792941 - 16793014
Alignment:
| Q |
1 |
aacaaatcattgcaagtcataatcttgctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtgg |
74 |
Q |
| |
|
||||||| ||||||||||| ||||||||| ||||| ||||| |||||| ||||||||| ||| |||| ||||| |
|
|
| T |
16792941 |
aacaaataattgcaagtcagaatcttgctcatgaacatgcatcaatattcaatgtaatttaaatactttagtgg |
16793014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 16629120 - 16629199
Alignment:
| Q |
91 |
ggactaataaaggttggtatttcttcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcagg |
170 |
Q |
| |
|
||||||||||||| | | ||||| ||||||||||| ||||||| ||| || ||||| | |||||||| ||||||||||| |
|
|
| T |
16629120 |
ggactaataaagggttgcatttcatcattcaaacgaacaacctcttctatatcaccgaatgctgcacgcagtgcttcagg |
16629199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 16629428 - 16629507
Alignment:
| Q |
91 |
ggactaataaaggttggtatttcttcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcagg |
170 |
Q |
| |
|
||||||||||||| | ||||||| ||||||||||| ||||||| ||| || || || | |||||||| ||||||||||| |
|
|
| T |
16629428 |
ggactaataaagggttgtatttcatcattcaaacgaacaacctcttctatatcgccgaatgctgcacgcagtgcttcagg |
16629507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 16638001 - 16638080
Alignment:
| Q |
91 |
ggactaataaaggttggtatttcttcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcagg |
170 |
Q |
| |
|
||||||||||||| | | ||||| ||||||||||| ||||||| ||| || ||||| | |||||||| ||||||||||| |
|
|
| T |
16638001 |
ggactaataaagggttgcatttcatcattcaaacgaacaacctcttctatatcaccgaatgctgcacgcagtgcttcagg |
16638080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 16638309 - 16638388
Alignment:
| Q |
91 |
ggactaataaaggttggtatttcttcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcagg |
170 |
Q |
| |
|
||||||||||||| | ||||||| ||||||||||| ||||||| ||| || || || | |||||||| ||||||||||| |
|
|
| T |
16638309 |
ggactaataaagggttgtatttcatcattcaaacgaacaacctcttctatatcgccgaatgctgcacgcagtgcttcagg |
16638388 |
T |
|
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Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 109 - 617
Target Start/End: Original strand, 38877946 - 38878453
Alignment:
| Q |
109 |
atttcttcattcaaacggacaaccttttcaatgtcaccaactgctgcacttagtgcttcaggcgacatagatgttatctgnnnnnnntatcagattcatt |
208 |
Q |
| |
|
||||| |||||||||||||| |||| || ||| |||||||| || ||| |||||||||||||| || ||||| | ||| | | |||||||| |
|
|
| T |
38877946 |
atttcatcattcaaacggaccacctctttaataccaccaactccttgactcagtgcttcaggcgaaatggatgtcagctgaaaataattt-agattcata |
38878044 |
T |
|
| Q |
209 |
gaatttactatgtatcagcactcaacttttatgagtcaatgaaaaaataaataaggtgcaagcacaagttt-ataggcctaccacttttatcaatctttg |
307 |
Q |
| |
|
|||||||||||||||||||||||| || ||| |||||| ||||||| |||||| | | ||||||||| ||||||||||||| || | || || || |
|
|
| T |
38878045 |
gaatttactatgtatcagcactcatctcttacaagtcaaggaaaaaacaaataaagatctgacacaagttttataggcctaccacgttaagcattcgctg |
38878144 |
T |
|
| Q |
308 |
catttcaggacatagctcttcagaaccaagagtaggtttctgagaatcttgattttgattattgctttcttctttcaagggtgaaatcccctgagtgttg |
407 |
Q |
| |
|
||| ||||| | ||||||||||||| |||||||| || |||||| |||||||||| |||||| |||||| |||||||||||||| || |||| || |
|
|
| T |
38878145 |
aattgcaggattttgctcttcagaaccgagagtaggcttttgagaaacttgattttggttattgttttctttaatcaagggtgaaatcttctcagtgctg |
38878244 |
T |
|
| Q |
408 |
gcgtgtttaccaaatgcttcagtttctgagatccttggagcgttgttgcttacaccaaatccttgcaatgaaatgtttgtcttctgttctacagcattgc |
507 |
Q |
| |
|
| | | |||||| ||||||| |||| ||||||||||||||| ||||| ||| | || ||| |||| || |||||||| |||| |||||||||| |
|
|
| T |
38878245 |
gtgcttgccccaaattgttcagttgctgaaatccttggagcgttgatgcttgcacaagattctttgaatgcaacgtttgtctgttgttgtacagcattgt |
38878344 |
T |
|
| Q |
508 |
cgggacctaagattgaaatatatagcaaataaatgttttccagcaacctcata-taggtcatttaagaatctacaaagaagtgtcaactaatggttacct |
606 |
Q |
| |
|
||| ||||||||||||||| |||| || ||||||||| | || || | ||| || ||||||| |||||||||| ||| || ||||||||||||||| |
|
|
| T |
38878345 |
cggtgcctaagattgaaatacatagtaactaaatgtttgctag-aagat-atagaagaccatttaataatctacaaaaaagagtgaactaatggttacct |
38878442 |
T |
|
| Q |
607 |
tttacgatcga |
617 |
Q |
| |
|
|||||||||| |
|
|
| T |
38878443 |
gttacgatcga |
38878453 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 38877787 - 38877856
Alignment:
| Q |
4 |
aaatcattgcaagtcataatcttgctgatgaaaatgcagcaatatcaaatgtaattgaaacacttcagtg |
73 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||| ||||| |||| |||||||||| | |||||||| |||| |
|
|
| T |
38877787 |
aaatcattacaagtcagaatcttgctgatgaacatgcatcaatgtcaaatgtaaattaaacactttagtg |
38877856 |
T |
|
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