View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17607_low_11 (Length: 434)
Name: NF17607_low_11
Description: NF17607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17607_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 29350730 - 29350553
Alignment:
| Q |
1 |
aagtgttcattatcagatataaaaaatatatgcaatacttcctttcacaaatgaaaattcctttctcagagggtgctacttcaaggcataatatgtaaat |
100 |
Q |
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| T |
29350730 |
aagtgtttattatcagatataaaaaatatatgcaatacttcctttcacaaatgaaaattcctttctcagagggtgctacttcaaggcataatatgtaaat |
29350631 |
T |
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| Q |
101 |
gcacctcgatctttaatttttaaggaggaatcaaagatgaatttgattcttgaacattccataaagcaagtttcaact |
178 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
29350630 |
gcacctcgatctttaatttttaaggaggaatcaaagatgaatttgattcttgaacattccatcaagcaagtttcaact |
29350553 |
T |
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