View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17607_low_22 (Length: 287)

Name: NF17607_low_22
Description: NF17607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17607_low_22
NF17607_low_22
[»] chr8 (10 HSPs)
chr8 (8-93)||(4030358-4030443)
chr8 (195-280)||(4030358-4030443)
chr8 (89-139)||(4031577-4031627)
chr8 (150-199)||(4031577-4031626)
chr8 (81-139)||(12195684-12195742)
chr8 (81-139)||(12440112-12440170)
chr8 (150-207)||(12195685-12195742)
chr8 (150-207)||(12440113-12440170)
chr8 (150-210)||(15349244-15349304)
chr8 (78-138)||(15349244-15349304)
[»] chr3 (6 HSPs)
chr3 (8-139)||(11015061-11015192)
chr3 (150-280)||(11015061-11015191)
chr3 (149-280)||(11024073-11024204)
chr3 (8-138)||(11024073-11024203)
chr3 (149-279)||(11005499-11005629)
chr3 (9-138)||(11005499-11005628)
[»] chr2 (2 HSPs)
chr2 (196-280)||(29350829-29350913)
chr2 (8-92)||(29350829-29350913)
[»] chr4 (52 HSPs)
chr4 (149-280)||(48870920-48871051)
chr4 (149-280)||(48876224-48876355)
chr4 (72-139)||(49038512-49038579)
chr4 (8-139)||(49043738-49043869)
chr4 (8-138)||(48870921-48871051)
chr4 (8-138)||(48876225-48876355)
chr4 (150-216)||(49038512-49038578)
chr4 (150-280)||(49043738-49043868)
chr4 (149-226)||(7790440-7790517)
chr4 (78-139)||(45371714-45371775)
chr4 (62-138)||(7790441-7790517)
chr4 (150-210)||(45371714-45371774)
chr4 (149-280)||(48886606-48886737)
chr4 (8-138)||(48886607-48886737)
chr4 (78-139)||(7878743-7878804)
chr4 (62-139)||(48147337-48147414)
chr4 (78-139)||(48853041-48853102)
chr4 (78-139)||(48864395-48864456)
chr4 (150-210)||(7878744-7878804)
chr4 (150-210)||(7908663-7908723)
chr4 (78-138)||(7908663-7908723)
chr4 (150-226)||(48147337-48147413)
chr4 (150-210)||(48853042-48853102)
chr4 (150-210)||(48864396-48864456)
chr4 (149-210)||(7786824-7786885)
chr4 (78-138)||(7786825-7786885)
chr4 (8-139)||(45365790-45365921)
chr4 (149-208)||(50666675-50666734)
chr4 (149-207)||(7237386-7237444)
chr4 (150-280)||(45365790-45365920)
chr4 (81-139)||(48156072-48156130)
chr4 (80-138)||(50666676-50666734)
chr4 (81-134)||(7237386-7237439)
chr4 (149-210)||(7766002-7766063)
chr4 (149-210)||(7771755-7771816)
chr4 (78-139)||(7773465-7773526)
chr4 (149-210)||(7813837-7813898)
chr4 (80-129)||(37826632-37826681)
chr4 (159-208)||(37826632-37826681)
chr4 (78-139)||(45384532-45384593)
chr4 (150-207)||(48156072-48156129)
chr4 (78-138)||(7766003-7766063)
chr4 (78-134)||(7771760-7771816)
chr4 (150-210)||(7773465-7773525)
chr4 (78-138)||(7813838-7813898)
chr4 (150-210)||(45384532-45384592)
chr4 (150-216)||(48903316-48903382)
chr4 (72-138)||(48903316-48903382)
chr4 (149-210)||(7800997-7801058)
chr4 (153-210)||(50669446-50669503)
chr4 (78-135)||(50669446-50669503)
chr4 (78-138)||(7800998-7801058)
[»] chr5 (7 HSPs)
chr5 (78-140)||(42561973-42562035)
chr5 (15-139)||(9120123-9120247)
chr5 (150-210)||(42561973-42562033)
chr5 (150-273)||(9120124-9120247)
chr5 (95-139)||(179418-179462)
chr5 (150-193)||(179419-179462)
chr5 (47-139)||(29688489-29688581)
[»] chr6 (4 HSPs)
chr6 (62-139)||(21016181-21016258)
chr6 (150-226)||(21016182-21016258)
chr6 (92-132)||(14197337-14197377)
chr6 (156-196)||(14197337-14197377)
[»] chr7 (2 HSPs)
chr7 (78-139)||(48884184-48884245)
chr7 (150-210)||(48884185-48884245)
[»] chr1 (10 HSPs)
chr1 (78-139)||(24416138-24416199)
chr1 (150-210)||(24416139-24416199)
chr1 (155-210)||(24367531-24367586)
chr1 (78-133)||(24367531-24367586)
chr1 (78-139)||(24340771-24340832)
chr1 (78-139)||(24353136-24353197)
chr1 (158-210)||(24323139-24323191)
chr1 (78-130)||(24323139-24323191)
chr1 (158-210)||(24340780-24340832)
chr1 (158-210)||(24353145-24353197)


Alignment Details
Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 4030358 - 4030443
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttag 93  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  4030358 tccaataatatcaccacttattgtagagcacattggggaaaagtacttaatggaaatgccatcaatagacagaacaagagtcttag 4030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 4030443 - 4030358
Alignment:
Q  195 ctaagactcttgttctgtctatagatgacatttccattaagtactttgccccaatgtgctctacaataagtggtgatattcttgga 280  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  4030443 ctaagactcttgttctgtctattgatggcatttccattaagtacttttccccaatgtgctctacaataagtggtgatattattgga 4030358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 4031577 - 4031627
Alignment:
Q  89 cttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  4031577 cttagtccaagacgaatgcattttgtattctttcataacccatatttcaac 4031627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 4031626 - 4031577
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaag 199  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  4031626 ttgaaatatgggttatgaaagaatacaaaatgcattcgtcttggactaag 4031577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 12195742 - 12195684
Alignment:
Q  81 acaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||||||||||||||| ||   |||| ||||||||||  |||||||||||||    
T  12195742 acaagagtcttagtccaagatgattgttgtttgtattctttcatctcccatatttcaac 12195684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 12440170 - 12440112
Alignment:
Q  81 acaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||||||||||||||| ||   |||| ||||||||||  |||||||||||||    
T  12440170 acaagagtcttagtccaagatgattgttgtttgtattctttcatctcccatatttcaac 12440112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 12195685 - 12195742
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgt 207  Q
    ||||||||||||  |||||||||| ||||   || |||||||||||||||||||||||    
T  12195685 ttgaaatatgggagatgaaagaatacaaacaacaatcatcttggactaagactcttgt 12195742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 12440113 - 12440170
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgt 207  Q
    ||||||||||||  |||||||||| ||||   || |||||||||||||||||||||||    
T  12440113 ttgaaatatgggagatgaaagaatacaaacaacaatcatcttggactaagactcttgt 12440170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 15349244 - 15349304
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||| |||||||||| |||| || | || |||||||| |||| |||||||||    
T  15349244 ttgaaatatgggtgatgaaagaatacaaagtgaactcttcttggacaaagattcttgttct 15349304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 15349304 - 15349244
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    ||||||||| |||| |||||||| || | || |||| |||||||||| |||||||||||||    
T  15349304 agaacaagaatctttgtccaagaagagttcactttgtattctttcatcacccatatttcaa 15349244  T

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Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 11015061 - 11015192
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgc 107  Q
    ||||| |||| |||||||| |||||||||| ||||||| | | |||| ||||||||||||||| ||||| || |||||||| |||  |||||| ||||||    
T  11015061 tccaataataccaccactttttgtagagcatattgggggataatactcaatggaaatgtcatcaatagataggacaagagttttaacccaagacgaatgc 11015160  T
Q  108 attttgcattctttcataacccatatttcaac 139  Q
    | |||| |||||||||||||||||||||||||    
T  11015161 actttgtattctttcataacccatatttcaac 11015192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 11015191 - 11015061
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaat 249  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||  ||| |||||||| || ||||| ||||||||||||||| |||| | | |||||||    
T  11015191 ttgaaatatgggttatgaaagaatacaaagtgcattcgtcttgggttaaaactcttgtcctatctattgatgacatttccattgagtattatcccccaat 11015092  T
Q  250 gtgctctacaataagtggtgatattcttgga 280  Q
     |||||||||| |||||||| |||| |||||    
T  11015091 atgctctacaaaaagtggtggtattattgga 11015061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 11024204 - 11024073
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaa 248  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| || ||||| ||| |||||| |||| ||||   | ||||||    
T  11024204 attgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaagactcttgtcctatctattgattacatttacattcagtatgatcccccaa 11024105  T
Q  249 tgtgctctacaataagtggtgatattcttgga 280  Q
    | |||||||||| | ||||| ||||| |||||    
T  11024104 tatgctctacaaaatgtggtcatattattgga 11024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 11024073 - 11024203
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgc 107  Q
    ||||| ||||| ||||| | |||||||||| ||||||| |   |||| |||| |||||| ||| ||||| || |||||||||||||||||||| ||||||    
T  11024073 tccaataatatgaccacattttgtagagcatattgggggatcatactgaatgtaaatgtaatcaatagataggacaagagtcttagtccaagacgaatgc 11024172  T
Q  108 attttgcattctttcataacccatatttcaa 138  Q
    | |||| ||||||||||||||||||||||||    
T  11024173 actttgtattctttcataacccatatttcaa 11024203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 279
Target Start/End: Complemental strand, 11005629 - 11005499
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaa 248  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||  | ||||| |||| ||||| |||| |||||  | | ||||    
T  11005629 attgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaaggctcttgtcttatctattgatggcatttgcattcagtacgatccgccaa 11005530  T
Q  249 tgtgctctacaataagtggtgatattcttgg 279  Q
    | |||| ||||| | ||||| ||||| ||||    
T  11005529 tatgctttacaaaatgtggtcatattattgg 11005499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 11005499 - 11005628
Alignment:
Q  9 ccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgca 108  Q
    |||| ||||| ||||| | ||||| |||| ||||| | |  ||||| |||| ||||| |||| ||||| |  ||||||| |||||||||||| |||||||    
T  11005499 ccaataatatgaccacattttgtaaagcatattggcggatcgtactgaatgcaaatgccatcaatagataagacaagagccttagtccaagacgaatgca 11005598  T
Q  109 ttttgcattctttcataacccatatttcaa 138  Q
     |||| ||||||||||||||||||||||||    
T  11005599 ctttgtattctttcataacccatatttcaa 11005628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 29350829 - 29350913
Alignment:
Q  196 taagactcttgttctgtctatagatgacatttccattaagtactttgccccaatgtgctctacaataagtggtgatattcttgga 280  Q
    ||||||||||||||||||||| |||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  29350829 taagactcttgttctgtctattgatggcatttccaataagtattttgccccaatgtgctctacaataggtggtgatattattgga 29350913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 29350913 - 29350829
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtctta 92  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||    
T  29350913 tccaataatatcaccacctattgtagagcacattggggcaaaatacttattggaaatgccatcaatagacagaacaagagtctta 29350829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 280
Target Start/End: Original strand, 48870920 - 48871051
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaa 248  Q
    |||||||| ||||| ||||| |||| |||| || | || |||||||| |||||||||||||| ||| | ||||||||||||  | ||| |||| |||||     
T  48870920 attgaaatgtgggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgttctttctgttgatgacatttccgatgagtccttttccccat 48871019  T
Q  249 tgtgctctacaataagtggtgatattcttgga 280  Q
    |||||| ||||| ||||||||||||| |||||    
T  48871020 tgtgctgtacaaaaagtggtgatattattgga 48871051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 280
Target Start/End: Original strand, 48876224 - 48876355
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaa 248  Q
    |||||||| ||||| ||||| |||| |||| || | || |||||||| |||||||||||||| ||| | ||||||||||||  | ||| |||| |||||     
T  48876224 attgaaatgtgggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgttctttctgttgatgacatttccgatgagtccttttccccat 48876323  T
Q  249 tgtgctctacaataagtggtgatattcttgga 280  Q
    |||||| ||||| ||||||||||||| |||||    
T  48876324 tgtgctgtacaaaaagtggtgatattattgga 48876355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 49038512 - 49038579
Alignment:
Q  72 atagacagaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||||||||||||||||||||| ||||| | |||| |||||||||| ||||||||||||||    
T  49038512 atagacagaacaagagtcttagtccaagacgaatgaactttgtattctttcatcacccatatttcaac 49038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 49043738 - 49043869
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgc 107  Q
    ||||| |||||||||| || ||||| | || ||||| || ||||| | | ||| |||| |||| ||||| | |||||||||||||||||| || ||||||    
T  49043738 tccaataatatcaccaatttttgtacaacatattggagcgaagtaatgagtgggaatgacatcaatagaaaaaacaagagtcttagtccatgacgaatgc 49043837  T
Q  108 attttgcattctttcataacccatatttcaac 139  Q
    | |||| |||||||||| ||||||||||||||    
T  49043838 actttgtattctttcatcacccatatttcaac 49043869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 48871051 - 48870921
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgc 107  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||| ||| |  |||||||||||| | ||| |||||||||||||| |||||||| || | |    
T  48871051 tccaataatatcaccactttttgtacagcacaatggggaaaaggactcatcggaaatgtcatcaacagaaagaacaagagtctttgtccaagacgagttc 48870952  T
Q  108 attttgcattctttcataacccatatttcaa 138  Q
    | |||| |||| ||||| ||||| |||||||    
T  48870951 actttgtattcattcatcacccacatttcaa 48870921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 48876355 - 48876225
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgc 107  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||| ||| |  |||||||||||| | ||| |||||||||||||| |||||||| || | |    
T  48876355 tccaataatatcaccactttttgtacagcacaatggggaaaaggactcatcggaaatgtcatcaacagaaagaacaagagtctttgtccaagacgagttc 48876256  T
Q  108 attttgcattctttcataacccatatttcaa 138  Q
    | |||| |||| ||||| ||||| |||||||    
T  48876255 actttgtattcattcatcacccacatttcaa 48876225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 49038578 - 49038512
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctat 216  Q
    ||||||||||||| |||||||||| |||| | ||||| |||||||||||||||||||||||||||||    
T  49038578 ttgaaatatgggtgatgaaagaatacaaagttcattcgtcttggactaagactcttgttctgtctat 49038512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 49043868 - 49043738
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaat 249  Q
    ||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||| | ||||| |||| |||| ||| | | ||||| || |||||    
T  49043868 ttgaaatatgggtgatgaaagaatacaaagtgcattcgtcatggactaagactcttgttttttctattgatgtcattcccactcattacttcgctccaat 49043769  T
Q  250 gtgctctacaataagtggtgatattcttgga 280  Q
     || | ||||| || |||||||||| |||||    
T  49043768 atgttgtacaaaaattggtgatattattgga 49043738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 7790440 - 7790517
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatt 226  Q
    |||||||||||||| |||||||||| |||| ||||||| ||||||||||| ||||||||||| ||||| |||| ||||    
T  7790440 attgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaaaactcttgttctttctattgatgccatt 7790517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 45371714 - 45371775
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  45371714 agaacaaaagtcttagtccaagacgaatgcactttgtattctttcataacccatatttcaac 45371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 7790517 - 7790441
Alignment:
Q  62 aatgtcatctatagacagaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    |||| |||| ||||| ||||||||||| ||||||||||| ||||||| |||| |||||||||| |||||||||||||    
T  7790517 aatggcatcaatagaaagaacaagagttttagtccaagacgaatgcactttgtattctttcatcacccatatttcaa 7790441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 45371774 - 45371714
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||    
T  45371774 ttgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaagacttttgttct 45371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 280
Target Start/End: Original strand, 48886606 - 48886737
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaa 248  Q
    |||||||| ||||| ||||| |||| |||| || | || |||||||| |||||||||||||| ||| | |||||||||||   | ||| |||| |||||     
T  48886606 attgaaatgtgggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgttctttctgttgatgacatttctgatgagtccttttccccat 48886705  T
Q  249 tgtgctctacaataagtggtgatattcttgga 280  Q
    |||||| ||||| ||||||||||||| |||||    
T  48886706 tgtgctgtacaaaaagtggtgatattattgga 48886737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 48886737 - 48886607
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgc 107  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||| ||| |   ||||||||||| | ||| |||||||||||||| |||||||| || | |    
T  48886737 tccaataatatcaccactttttgtacagcacaatggggaaaaggactcatcagaaatgtcatcaacagaaagaacaagagtctttgtccaagacgagttc 48886638  T
Q  108 attttgcattctttcataacccatatttcaa 138  Q
    | |||| |||| ||||| ||||| |||||||    
T  48886637 actttgtattcattcatcacccacatttcaa 48886607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 7878804 - 7878743
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||| ||| ||||||||||||||| |||| |||||||||| ||||||||||||||    
T  7878804 agaacaagagttttaatccaagatgaatgcactttgtattctttcatcacccatatttcaac 7878743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 48147337 - 48147414
Alignment:
Q  62 aatgtcatctatagacagaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    |||| |||| ||||||| |  |||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||    
T  48147337 aatgccatcaatagacaaattaagagtcttagtccaagacgaatgcactttgtattctttcatcacccatatttcaac 48147414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 48853102 - 48853041
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||||| ||||||||||||||    
T  48853102 agaacaagagtcttagtccaagacgaacgcactttgtattctttcatgacccatatttcaac 48853041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 48864456 - 48864395
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||| ||||||||||||| ||||||| |||| |||||||||| ||||||||||||||    
T  48864456 agaacaagaatcttagtccaagacgaatgcactttgtattctttcatcacccatatttcaac 48864395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 7878744 - 7878804
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||| ||| |||||||||||    
T  7878744 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggattaaaactcttgttct 7878804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 7908663 - 7908723
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||| ||| |||||||||||    
T  7908663 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactcttgttct 7908723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 7908723 - 7908663
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    ||||||||||| ||| ||||||||||||||| |||| |||||||||| |||||||||||||    
T  7908723 agaacaagagttttattccaagatgaatgcactttgtattctttcatcacccatatttcaa 7908663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 48147413 - 48147337
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatt 226  Q
    ||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||  | ||||||| |||| ||||    
T  48147413 ttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaagactcttaatttgtctattgatggcatt 48147337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 48853042 - 48853102
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||| |||||||||| |||| ||| ||| |||||||||||||||||||||||    
T  48853042 ttgaaatatgggtcatgaaagaatacaaagtgcgttcgtcttggactaagactcttgttct 48853102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 48864396 - 48864456
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||| |||||||||| |||| ||||||| ||||||||||||| |||||||||    
T  48864396 ttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaagattcttgttct 48864456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 7786824 - 7786885
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    |||||||||||||| |||||||||| |||  |||||| |||||||| |||||||||||||||    
T  7786824 attgaaatatgggtgatgaaagaatacaacgtgcatttatcttggaataagactcttgttct 7786885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 7786885 - 7786825
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    ||||||||||||||| |||||||| ||||||  ||| |||||||||| |||||||||||||    
T  7786885 agaacaagagtcttattccaagataaatgcacgttgtattctttcatcacccatatttcaa 7786825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 45365790 - 45365921
Alignment:
Q  8 tccaagaatatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgc 107  Q
    ||||| ||||||||| ||| |||||||||| |  |||| |||||| | | ||| |||| |||| ||||  |||||  ||||||| |||||||| ||| ||    
T  45365790 tccaataatatcaccgctttttgtagagcataaaggggaaaagtattgagtgggaatgccatcaataggaagaacgtgagtctttgtccaagacgaacgc 45365889  T
Q  108 attttgcattctttcataacccatatttcaac 139  Q
    | |||  |||||||||| ||||||||||||||    
T  45365890 actttatattctttcatcacccatatttcaac 45365921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 50666675 - 50666734
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgtt 208  Q
    |||||| ||||||| ||| |||||| |||| ||||||||||||||||||| |||||||||    
T  50666675 attgaattatgggtgatgtaagaatacaaagtgcattcatcttggactaaaactcttgtt 50666734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 7237444 - 7237386
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgt 207  Q
    |||| ||||||||| |||||||||| |||||||||||| | ||||||||| ||||||||    
T  7237444 attgtaatatgggtgatgaaagaatacaaaatgcattcgttttggactaaaactcttgt 7237386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 45365920 - 45365790
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaat 249  Q
    ||||||||||||| ||||||||||  ||| ||| ||| |||||||| |||||||  |||||  |||| |||| |||| ||| | | |||||| ||||  |    
T  45365920 ttgaaatatgggtgatgaaagaatataaagtgcgttcgtcttggacaaagactcacgttcttcctattgatggcattcccactcaatacttttccccttt 45365821  T
Q  250 gtgctctacaataagtggtgatattcttgga 280  Q
     |||||||||| ||| ||||||||| |||||    
T  45365820 atgctctacaaaaagcggtgatattattgga 45365790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 48156072 - 48156130
Alignment:
Q  81 acaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    |||||||| ||||||||||| ||||||| |||| |||| ||||| ||||||||||||||    
T  48156072 acaagagttttagtccaagaagaatgcactttgtattcgttcatcacccatatttcaac 48156130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 50666734 - 50666676
Alignment:
Q  80 aacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    ||||||||| ||||||||||||||||||| |||| |||||| ||| ||||||| |||||    
T  50666734 aacaagagttttagtccaagatgaatgcactttgtattcttacatcacccataattcaa 50666676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 7237386 - 7237439
Alignment:
Q  81 acaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatt 134  Q
    |||||||| ||||||||| | |||||||||||| |||||||||| |||||||||    
T  7237386 acaagagttttagtccaaaacgaatgcattttgtattctttcatcacccatatt 7237439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 7766002 - 7766063
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    |||||||||||||| |||||||||| |||| || |||| || ||||||||||| ||||||||    
T  7766002 attgaaatatgggtgatgaaagaatacaaagtgtattcgtcatggactaagacacttgttct 7766063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 7771755 - 7771816
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    |||| ||||||||| |||||||||| |||| ||||||| || |||||||| |||||||||||    
T  7771755 attgtaatatgggtgatgaaagaatacaaagtgcattcgtcatggactaaaactcttgttct 7771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 7773465 - 7773526
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||  ||| ||||||| ||||||| |||| |||||||||| ||||||||||||||    
T  7773465 agaacaagagatttaatccaagacgaatgcactttgtattctttcatcacccatatttcaac 7773526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 7813837 - 7813898
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||||  ||||||||| |||| ||||||| ||||||| ||| |||||||||||    
T  7813837 attgaaatatgggtgttgaaagaatacaaagtgcattcgtcttggaataaaactcttgttct 7813898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 37826632 - 37826681
Alignment:
Q  80 aacaagagtcttagtccaagatgaatgcattttgcattctttcataaccc 129  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||| ||||    
T  37826632 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcaccc 37826681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 37826681 - 37826632
Alignment:
Q  159 gggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgtt 208  Q
    |||| |||||||||| |||| ||||||| |||||||||||||||||||||    
T  37826681 gggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 37826632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 45384532 - 45384593
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    |||||| ||||||| |||||||| ||||||| |||  |||||||||| ||||||||||||||    
T  45384532 agaacacgagtctttgtccaagacgaatgcactttatattctttcatcacccatatttcaac 45384593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 48156129 - 48156072
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgt 207  Q
    ||||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||    
T  48156129 ttgaaatatgggtgatgaacgaatacaaagtgcattcttcttggactaaaactcttgt 48156072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 7766063 - 7766003
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    |||||||| ||||||||||| || |||| || |||| |||||||||| |||||||||||||    
T  7766063 agaacaagtgtcttagtccatgacgaatacactttgtattctttcatcacccatatttcaa 7766003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 7771816 - 7771760
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatt 134  Q
    ||||||||||| |||||||| || ||||||| |||| |||||||||| |||||||||    
T  7771816 agaacaagagttttagtccatgacgaatgcactttgtattctttcatcacccatatt 7771760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 7773525 - 7773465
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||| |||||||||| |||| ||||||| ||||||| |||  ||||||||||    
T  7773525 ttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggattaaatctcttgttct 7773465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 7813898 - 7813838
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    ||||||||||| ||| ||||||| ||||||| |||| |||||||||  |||||||||||||    
T  7813898 agaacaagagttttattccaagacgaatgcactttgtattctttcaacacccatatttcaa 7813838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 45384592 - 45384532
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||| ||||||||||  ||| ||||||| |||||||| ||||||| ||||||    
T  45384592 ttgaaatatgggtgatgaaagaatataaagtgcattcgtcttggacaaagactcgtgttct 45384532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 48903316 - 48903382
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctat 216  Q
    ||||||||||||| |||||||||| |||| ||||||  ||||||||||| | |  ||||||||||||    
T  48903316 ttgaaatatgggtgatgaaagaatacaaagtgcatttgtcttggactaaaatttgtgttctgtctat 48903382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 48903382 - 48903316
Alignment:
Q  72 atagacagaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    ||||||||||||  | | |||||||||||  |||||| |||| |||||||||| |||||||||||||    
T  48903382 atagacagaacacaaattttagtccaagacaaatgcactttgtattctttcatcacccatatttcaa 48903316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 7800997 - 7801058
Alignment:
Q  149 attgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||||||||  ||||||| | |||| ||||||| ||||||| ||| |||||||||||    
T  7800997 attgaaatatgggtgttgaaagattacaaagtgcattcgtcttggaataaaactcttgttct 7801058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 50669446 - 50669503
Alignment:
Q  153 aaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    |||| ||||| |||||||| | |||  |||||||||||||||||||||||||| ||||    
T  50669446 aaatgtgggtgatgaaagattccaagttgcattcatcttggactaagactcttattct 50669503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 50669503 - 50669446
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatattt 135  Q
    |||| ||||||||||||||||||||||||||  ||| | |||||||| ||||| ||||    
T  50669503 agaataagagtcttagtccaagatgaatgcaacttggaatctttcatcacccacattt 50669446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 7801058 - 7800998
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaa 138  Q
    ||||||||||| ||| ||||||| ||||||| |||| | |||||||  |||||||||||||    
T  7801058 agaacaagagttttattccaagacgaatgcactttgtaatctttcaacacccatatttcaa 7800998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 42561973 - 42562035
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaaca 140  Q
    ||||||||| ||||||||||||||||||||| |||| |||||||||| |||||||| ||||||    
T  42561973 agaacaagaatcttagtccaagatgaatgcactttgtattctttcatcacccatatatcaaca 42562035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 9120247 - 9120123
Alignment:
Q  15 atatcaccacttattgtagagcacattggggcaaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgcattttgc 114  Q
    |||||||||||| |||| || || || |||| |||   |||| |||||||| | || ||||||| ||||||||| ||  ||||||| ||||||| ||||     
T  9120247 atatcaccactttttgttgaacatataggggaaaatagcttagtggaaatgccgtcaatagacaaaacaagagttttcttccaagaggaatgcactttgt 9120148  T
Q  115 attctttcataacccatatttcaac 139  Q
    |||||||||| ||||||||||||||    
T  9120147 attctttcatcacccatatttcaac 9120123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 42562033 - 42561973
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    |||| |||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||    
T  42562033 ttgatatatgggtgatgaaagaatacaaagtgcattcatcttggactaagattcttgttct 42561973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 273
Target Start/End: Original strand, 9120124 - 9120247
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatttccattaagtactttgccccaat 249  Q
    ||||||||||||| |||||||||| |||| ||||||| |||||||  || ||||||||| ||||||| || | |||||||| ||||   ||| |||| ||    
T  9120124 ttgaaatatgggtgatgaaagaatacaaagtgcattcctcttggaagaaaactcttgttttgtctattgacggcatttccactaagctattttcccctat 9120223  T
Q  250 gtgctctacaataagtggtgatat 273  Q
     || || |||| ||||||||||||    
T  9120224 atgttcaacaaaaagtggtgatat 9120247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 179462 - 179418
Alignment:
Q  95 ccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||    
T  179462 ccaagatgaatgcactttgtattctttcatcacccatatttcaac 179418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 179419 - 179462
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttgg 193  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||    
T  179419 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttgg 179462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 29688581 - 29688489
Alignment:
Q  47 aaagtacttaatggaaatgtcatctatagacagaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    |||||| | ||||| ||||||| | | ||| ||||| |||||||| |||||||| || ||||  ||| ||| |||||| ||||||||||||||    
T  29688581 aaagtagtgaatgggaatgtcaccaaaagaaagaacgagagtctttgtccaagacgattgcacattgtattttttcatcacccatatttcaac 29688489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 21016258 - 21016181
Alignment:
Q  62 aatgtcatctatagacagaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||| ||||| | |  |||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||    
T  21016258 aatgtcatcaatagagaaagtaagagtcttagtccaagacgaatgtactttgtattctttcataacccatatttcaac 21016181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 21016182 - 21016258
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttctgtctatagatgacatt 226  Q
    |||||||||||||||||||||||| |||| | ||||| ||||||||||||||||||  | | ||||| |||||||||    
T  21016182 ttgaaatatgggttatgaaagaatacaaagtacattcgtcttggactaagactcttactttctctattgatgacatt 21016258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 14197337 - 14197377
Alignment:
Q  92 agtccaagatgaatgcattttgcattctttcataacccata 132  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  14197337 agtccaagatgaatgcattttgtattctttcatcacccata 14197377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 14197377 - 14197337
Alignment:
Q  156 tatgggttatgaaagaatgcaaaatgcattcatcttggact 196  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  14197377 tatgggtgatgaaagaatacaaaatgcattcatcttggact 14197337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 48884245 - 48884184
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    |||||||||||||||||||||||   ||||| |||| |||||||||| ||| ||||||||||    
T  48884245 agaacaagagtcttagtccaagacatatgcactttgtattctttcatcacctatatttcaac 48884184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 48884185 - 48884245
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||||||| ||| |||||||||| |||| |||||   |||||||||||||||||||||||    
T  48884185 ttgaaatataggtgatgaaagaatacaaagtgcatatgtcttggactaagactcttgttct 48884245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 24416199 - 24416138
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||| |||||||||||||| |||  |||| |||||||||| |||||||| |||||    
T  24416199 agaacaagagttttagtccaagatgactgccctttgtattctttcatcacccatatatcaac 24416138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 24416139 - 24416199
Alignment:
Q  150 ttgaaatatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    |||| |||||||| |||||||||| ||||  ||| |||||||||||||| |||||||||||    
T  24416139 ttgatatatgggtgatgaaagaatacaaagggcagtcatcttggactaaaactcttgttct 24416199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 24367531 - 24367586
Alignment:
Q  155 atatgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    |||||||| ||| |||||| |||| ||||||| ||||||||||| |||||||||||    
T  24367531 atatgggtaatggaagaatacaaagtgcattcgtcttggactaaaactcttgttct 24367586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 24367586 - 24367531
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatat 133  Q
    ||||||||||| ||||||||||| ||||||| |||| |||||| ||| ||||||||    
T  24367586 agaacaagagttttagtccaagacgaatgcactttgtattcttccattacccatat 24367531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 24340832 - 24340771
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||| |||||||||||||| |||| |||  |||||||||| ||||| || |||||    
T  24340832 agaacaagagttttagtccaagatgactgcactttatattctttcattacccagatatcaac 24340771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 24353197 - 24353136
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataacccatatttcaac 139  Q
    ||||||||||| |||||||||||||| |||| |||  |||||||||| ||||| || |||||    
T  24353197 agaacaagagttttagtccaagatgactgcactttatattctttcattacccagatatcaac 24353136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 24323139 - 24323191
Alignment:
Q  158 tgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||| |||||||||| |||| |||| ||||||| |||||| |||||||||||    
T  24323139 tgggtgatgaaagaatacaaagtgcagtcatcttcgactaaaactcttgttct 24323191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 24323191 - 24323139
Alignment:
Q  78 agaacaagagtcttagtccaagatgaatgcattttgcattctttcataaccca 130  Q
    ||||||||||| |||||| ||||||| |||| |||| |||||||||| |||||    
T  24323191 agaacaagagttttagtcgaagatgactgcactttgtattctttcatcaccca 24323139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 24340780 - 24340832
Alignment:
Q  158 tgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||| ||||||||||  ||| |||| |||||||||||||| |||||||||||    
T  24340780 tgggtaatgaaagaatataaagtgcagtcatcttggactaaaactcttgttct 24340832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 24353145 - 24353197
Alignment:
Q  158 tgggttatgaaagaatgcaaaatgcattcatcttggactaagactcttgttct 210  Q
    ||||| ||||||||||  ||| |||| |||||||||||||| |||||||||||    
T  24353145 tgggtaatgaaagaatataaagtgcagtcatcttggactaaaactcttgttct 24353197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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