View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17610_low_5 (Length: 253)
Name: NF17610_low_5
Description: NF17610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17610_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 37925964 - 37925745
Alignment:
| Q |
25 |
gaggtcattgccatcatgtcatctcctcatagtattgaatcactactttgtacatatgatcaatgtatttaataaaatcatttggtgctatgattgattt |
124 |
Q |
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| T |
37925964 |
gaggtcattgccatcatgtcatctcttcatagtattgaatcactactttgtacatatgatcaatgtatttaataaaatcatttggtgctatgattgattt |
37925865 |
T |
|
| Q |
125 |
actaattcactgcaggtcttacttgtagttcttgaaggatgtactatcctagtctgggtggtgcacatattctagaatctagagtctcgaccttgcttgt |
224 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37925864 |
actaattcactgtaggtcttacttgtagttcttgaaggatgtactatcctagtctgggtggtgcacatattctagaatctagagtctcgaccttgcttgt |
37925765 |
T |
|
| Q |
225 |
-agggtgtagttgatgatgt |
243 |
Q |
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||||||||||||||||||| |
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| T |
37925764 |
aagggtgtagttgatgatgt |
37925745 |
T |
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