View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17611_high_10 (Length: 376)

Name: NF17611_high_10
Description: NF17611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17611_high_10
NF17611_high_10
[»] chr5 (14 HSPs)
chr5 (1-328)||(22750922-22751249)
chr5 (1-280)||(38144532-38144809)
chr5 (1-275)||(28370055-28370327)
chr5 (1-275)||(19512168-19512441)
chr5 (84-285)||(23528497-23528695)
chr5 (211-323)||(23111150-23111264)
chr5 (211-275)||(18407944-18408008)
chr5 (220-276)||(22438747-22438803)
chr5 (221-276)||(19236900-19236955)
chr5 (223-276)||(22461158-22461211)
chr5 (223-276)||(22467782-22467835)
chr5 (221-276)||(20781744-20781799)
chr5 (247-276)||(17021913-17021942)
chr5 (220-280)||(42961566-42961626)
[»] chr7 (27 HSPs)
chr7 (1-328)||(18873141-18873468)
chr7 (1-288)||(15167956-15168242)
chr7 (1-271)||(10895795-10896065)
chr7 (2-280)||(12709839-12710117)
chr7 (2-280)||(13122910-13123188)
chr7 (1-323)||(14422766-14423089)
chr7 (1-275)||(16009359-16009631)
chr7 (63-280)||(13743552-13743768)
chr7 (84-280)||(12590639-12590832)
chr7 (84-280)||(13007299-13007491)
chr7 (79-273)||(16677152-16677348)
chr7 (79-273)||(17651388-17651584)
chr7 (220-275)||(11382871-11382926)
chr7 (220-275)||(11389348-11389403)
chr7 (220-276)||(20311051-20311107)
chr7 (220-276)||(21230959-21231015)
chr7 (212-275)||(13679485-13679548)
chr7 (221-276)||(2971254-2971309)
chr7 (221-276)||(20906461-20906516)
chr7 (221-275)||(11311059-11311113)
chr7 (240-280)||(831629-831669)
chr7 (240-280)||(1196809-1196849)
chr7 (240-280)||(34958578-34958618)
chr7 (219-275)||(46625961-46626017)
chr7 (221-276)||(29181109-29181164)
chr7 (223-276)||(31155396-31155449)
chr7 (224-276)||(16091078-16091130)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-280)||(11846-12125)
scaffold0026 (1-276)||(111468-111741)
[»] chr3 (25 HSPs)
chr3 (1-288)||(14762746-14763032)
chr3 (1-273)||(38310802-38311074)
chr3 (1-273)||(20247791-20248055)
chr3 (12-273)||(24192747-24193009)
chr3 (1-275)||(9534110-9534382)
chr3 (1-276)||(23370505-23370779)
chr3 (85-276)||(24933828-24934016)
chr3 (12-273)||(55499104-55499365)
chr3 (98-280)||(41455093-41455272)
chr3 (140-280)||(16801463-16801602)
chr3 (214-275)||(18929239-18929300)
chr3 (211-275)||(17240513-17240577)
chr3 (221-276)||(13302240-13302295)
chr3 (221-276)||(13323787-13323842)
chr3 (221-276)||(12033444-12033499)
chr3 (221-276)||(13312896-13312951)
chr3 (221-276)||(17131732-17131787)
chr3 (221-276)||(51301589-51301644)
chr3 (162-276)||(10389443-10389557)
chr3 (162-276)||(10414532-10414646)
chr3 (162-276)||(10421202-10421316)
chr3 (221-276)||(14865846-14865901)
chr3 (241-276)||(23392819-23392854)
chr3 (219-273)||(16801027-16801081)
chr3 (240-276)||(2247649-2247685)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-280)||(960-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-280)||(49961-50238)
[»] chr4 (16 HSPs)
chr4 (2-280)||(8045828-8046105)
chr4 (1-280)||(11847888-11848173)
chr4 (162-276)||(53483646-53483760)
chr4 (220-276)||(15408139-15408195)
chr4 (219-275)||(8834895-8834951)
chr4 (219-275)||(13888641-13888697)
chr4 (221-273)||(14486661-14486713)
chr4 (219-275)||(15245215-15245271)
chr4 (219-270)||(22724691-22724742)
chr4 (219-275)||(15308120-15308176)
chr4 (240-280)||(15747552-15747592)
chr4 (221-276)||(16146830-16146885)
chr4 (221-276)||(27906266-27906321)
chr4 (245-275)||(15069781-15069811)
chr4 (245-275)||(15076381-15076411)
chr4 (219-276)||(14912081-14912138)
[»] chr6 (30 HSPs)
chr6 (1-280)||(29614142-29614421)
chr6 (42-288)||(23057760-23058005)
chr6 (1-323)||(23838980-23839303)
chr6 (12-280)||(18800230-18800497)
chr6 (1-276)||(10986180-10986454)
chr6 (1-275)||(4477639-4477912)
chr6 (141-280)||(930091-930229)
chr6 (12-273)||(21565214-21565474)
chr6 (84-280)||(12168230-12168422)
chr6 (84-280)||(19287139-19287331)
chr6 (84-280)||(19785865-19786057)
chr6 (84-280)||(19878323-19878515)
chr6 (84-280)||(19884099-19884291)
chr6 (193-276)||(34639986-34640069)
chr6 (193-276)||(34646660-34646743)
chr6 (162-276)||(25469704-25469816)
chr6 (220-276)||(24512843-24512899)
chr6 (223-275)||(9187498-9187550)
chr6 (219-275)||(25348486-25348542)
chr6 (219-307)||(25397172-25397261)
chr6 (219-273)||(25598643-25598697)
chr6 (211-276)||(31252413-31252478)
chr6 (219-275)||(19471335-19471391)
chr6 (219-273)||(2286769-2286823)
chr6 (187-276)||(11288668-11288758)
chr6 (241-275)||(18659450-18659484)
chr6 (241-275)||(24441673-24441707)
chr6 (223-276)||(15458492-15458545)
chr6 (223-276)||(15465087-15465140)
chr6 (248-276)||(28288509-28288537)
[»] scaffold0924 (1 HSPs)
scaffold0924 (18-280)||(746-1008)
[»] scaffold0029 (2 HSPs)
scaffold0029 (56-280)||(111717-111942)
scaffold0029 (1-46)||(111682-111727)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-280)||(1893-2171)
scaffold0117 (1-280)||(8570-8848)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-273)||(14398-14670)
[»] chr8 (15 HSPs)
chr8 (2-280)||(23866396-23866674)
chr8 (1-273)||(8727735-8728007)
chr8 (1-276)||(44477405-44477678)
chr8 (1-276)||(44492563-44492836)
chr8 (84-280)||(17054458-17054650)
chr8 (1-184)||(27940946-27941127)
chr8 (219-330)||(18614271-18614382)
chr8 (211-323)||(23482003-23482117)
chr8 (219-275)||(39364919-39364975)
chr8 (221-288)||(29643374-29643440)
chr8 (220-276)||(14056563-14056619)
chr8 (220-276)||(25111976-25112032)
chr8 (221-276)||(24320670-24320725)
chr8 (219-275)||(21931696-21931752)
chr8 (220-280)||(27940847-27940907)
[»] chr1 (16 HSPs)
chr1 (1-323)||(20436974-20437297)
chr1 (162-280)||(41111977-41112094)
chr1 (211-330)||(32651563-32651682)
chr1 (211-275)||(18712790-18712854)
chr1 (220-275)||(19663517-19663572)
chr1 (219-275)||(20805320-20805376)
chr1 (220-275)||(11158093-11158148)
chr1 (219-273)||(10811785-10811839)
chr1 (221-276)||(20851132-20851187)
chr1 (221-276)||(20857759-20857814)
chr1 (221-276)||(21706276-21706331)
chr1 (221-276)||(21710818-21710873)
chr1 (245-275)||(24476350-24476380)
chr1 (245-275)||(25091418-25091448)
chr1 (241-274)||(18271338-18271371)
chr1 (241-274)||(18275992-18276025)
[»] chr2 (17 HSPs)
chr2 (1-288)||(19661442-19661726)
chr2 (1-275)||(6483500-6483772)
chr2 (1-275)||(6486967-6487239)
chr2 (79-280)||(26583687-26583886)
chr2 (12-273)||(23089057-23089317)
chr2 (12-273)||(23878801-23879060)
chr2 (17-275)||(23101463-23101720)
chr2 (162-276)||(5706023-5706137)
chr2 (211-275)||(23265133-23265197)
chr2 (211-275)||(23280201-23280265)
chr2 (214-275)||(21908353-21908414)
chr2 (219-275)||(24661576-24661632)
chr2 (221-276)||(10577-10632)
chr2 (221-276)||(25180929-25180984)
chr2 (221-276)||(26885183-26885237)
chr2 (223-276)||(23168298-23168351)
chr2 (223-276)||(23579555-23579608)
[»] scaffold0247 (1 HSPs)
scaffold0247 (19-280)||(11141-11401)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-276)||(10195-10469)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-276)||(1525-1799)
[»] scaffold0058 (1 HSPs)
scaffold0058 (2-280)||(75-350)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-280)||(17950-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (193-328)||(8049-8184)
scaffold0456 (193-328)||(904-1039)
scaffold0456 (36-130)||(806-899)
scaffold0456 (36-130)||(7951-8044)
[»] scaffold0476 (1 HSPs)
scaffold0476 (12-273)||(3295-3556)
[»] scaffold0154 (1 HSPs)
scaffold0154 (156-280)||(30792-30917)
[»] scaffold0077 (1 HSPs)
scaffold0077 (17-273)||(3624-3879)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-116)||(3443-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (85-280)||(1728-1920)
scaffold0796 (85-280)||(5751-5943)
[»] scaffold0004 (2 HSPs)
scaffold0004 (211-322)||(116887-116998)
scaffold0004 (241-274)||(60441-60474)
[»] scaffold0129 (1 HSPs)
scaffold0129 (164-276)||(45274-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (211-275)||(16811-16875)
[»] scaffold0461 (1 HSPs)
scaffold0461 (211-275)||(8-72)
[»] scaffold0310 (1 HSPs)
scaffold0310 (220-276)||(17643-17699)
[»] scaffold0146 (1 HSPs)
scaffold0146 (211-275)||(13623-13687)
[»] scaffold0107 (1 HSPs)
scaffold0107 (220-276)||(40531-40587)
[»] scaffold0020 (1 HSPs)
scaffold0020 (211-275)||(101928-101992)
[»] scaffold0019 (1 HSPs)
scaffold0019 (220-276)||(135473-135529)
[»] scaffold0139 (1 HSPs)
scaffold0139 (220-328)||(14944-15052)
[»] scaffold0235 (1 HSPs)
scaffold0235 (222-274)||(22594-22646)
[»] scaffold0124 (2 HSPs)
scaffold0124 (220-275)||(34276-34331)
scaffold0124 (219-276)||(35438-35495)
[»] scaffold0138 (1 HSPs)
scaffold0138 (219-275)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (212-275)||(1378-1441)
[»] scaffold0815 (1 HSPs)
scaffold0815 (224-280)||(1453-1509)
[»] scaffold0096 (1 HSPs)
scaffold0096 (219-279)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (221-276)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (221-276)||(10239-10294)
[»] scaffold0028 (1 HSPs)
scaffold0028 (223-328)||(69749-69855)
[»] scaffold0023 (1 HSPs)
scaffold0023 (221-276)||(135438-135493)
[»] scaffold0001 (1 HSPs)
scaffold0001 (221-276)||(493028-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (187-280)||(680-774)
[»] scaffold1318 (1 HSPs)
scaffold1318 (221-275)||(1913-1967)
[»] scaffold0610 (1 HSPs)
scaffold0610 (261-330)||(6540-6609)
[»] scaffold0609 (1 HSPs)
scaffold0609 (211-276)||(5857-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (219-275)||(2628-2684)
[»] scaffold0261 (1 HSPs)
scaffold0261 (221-276)||(23569-23624)
[»] scaffold0053 (2 HSPs)
scaffold0053 (221-276)||(79490-79545)
scaffold0053 (242-309)||(79057-79125)
[»] scaffold0790 (1 HSPs)
scaffold0790 (247-280)||(5480-5513)
[»] scaffold0481 (1 HSPs)
scaffold0481 (229-274)||(676-721)
[»] scaffold0249 (1 HSPs)
scaffold0249 (223-276)||(13894-13947)
[»] scaffold0600 (1 HSPs)
scaffold0600 (219-275)||(732-788)
[»] scaffold0180 (1 HSPs)
scaffold0180 (226-275)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (221-273)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (219-275)||(121902-121958)
scaffold0031 (219-275)||(132778-132834)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 22750922 - 22751249
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  22750922 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 22751021  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  22751022 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 22751121  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgcacaacgacc 300  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22751122 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacgacc 22751221  T
Q  301 ggattctctgactctacttgttcatctc 328  Q
    ||||||||||||| ||||||||| ||||    
T  22751222 ggattctctgactatacttgttcttctc 22751249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 38144809 - 38144532
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| | |||||||||||||| |  |||||||||| ||| ||||| || ||| ||||||||||| |||||||||| |||||  | ||||    
T  38144809 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagat 38144711  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| |||||||||||||||||||||    
T  38144710 taagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttc 38144612  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144611 caaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 38144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 28370327 - 28370055
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| |||  |||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  28370327 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 28370229  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| |||||||  ||||||  |||||| |||||||| |||||||| |||| || ||||||||||||| |||||||||||||||||||||    
T  28370228 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 28370130  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370129 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 19512168 - 19512441
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  19512168 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 19512266  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| |||||||  ||||||  |||||| |||||||| |||||||| |||| || ||||||||||||| ||||||||||||||||| |||    
T  19512267 taagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttc 19512365  T
Q  201 caaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19512366 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 84 - 285
Target Start/End: Original strand, 23528497 - 23528695
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  23528497 acagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaacccta 23528594  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttaga 283  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23528595 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttaga 23528693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 323
Target Start/End: Complemental strand, 23111264 - 23111150
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctc 308  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    ||| ||| ||||||| | |||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctc 23111165  T
Q  309 tgactctacttgttc 323  Q
    |||||| ||||||||    
T  23111164 tgactccacttgttc 23111150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 22438803 - 22438747
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttag 22438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 276
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  247 tattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 280
Target Start/End: Original strand, 42961566 - 42961626
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagtttt 42961626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 18873141 - 18873468
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  18873141 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 18873240  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  18873241 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 18873340  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgcacaacgacc 300  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  18873341 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacggcc 18873440  T
Q  301 ggattctctgactctacttgttcatctc 328  Q
    ||||||||||||| ||||||||| ||||    
T  18873441 ggattctctgactatacttgttcttctc 18873468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 15167956 - 15168242
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  15167956 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 15168055  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  15168056 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 15168155  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 288  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  15168156 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta-atttagaagaaa 15168242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 10896065 - 10895795
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  10896065 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 10895966  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||||| |||    
T  10895965 taagttttcattctgaacattatattacaagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttc 10895867  T
Q  201 c-aaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttac 271  Q
    | ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10895866 caaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 2 - 280
Target Start/End: Complemental strand, 12710117 - 12709839
Alignment:
Q  2 caacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaa-tcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| | |||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||| ||| | || ||||||||||||||||| |||    
T  12710117 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gat 12710019  T
Q  101 taagttttcattctgaacattatattacaagg-gaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttatttt 199  Q
    |||||||  |||||||||||||||||||||   |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  12710018 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 12709919  T
Q  200 ccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12709918 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 12709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 2 - 280
Target Start/End: Complemental strand, 13123188 - 13122910
Alignment:
Q  2 caacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaa-tcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| | |||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||| ||| | || ||||||||||||||||| |||    
T  13123188 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gat 13123090  T
Q  101 taagttttcattctgaacattatattacaagg-gaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttatttt 199  Q
    |||||||  |||||||||||||||||||||   |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  13123089 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 13122990  T
Q  200 ccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13122989 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 13122910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 14422766 - 14423089
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| | |||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||| | ||||    
T  14422766 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagat 14422864  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| |||    
T  14422865 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 14422963  T
Q  201 caaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacg 297  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| |||  ||||||     
T  14422964 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttagatgaacaaaaacacaaca 14423063  T
Q  298 accggattctctgactctacttgttc 323  Q
    | ||||||||||||||| ||||||||    
T  14423064 atcggattctctgactccacttgttc 14423089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 16009359 - 16009631
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||| | |||||||||| |||||  | ||||    
T  16009359 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcagtttatgatcacaacaacagtatagat 16009457  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| | |||||| |||||||| |||    
T  16009458 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttc 16009556  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009557 caaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 63 - 280
Target Start/End: Original strand, 13743552 - 13743768
Alignment:
Q  63 aatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttccctt 162  Q
    |||||||| |||| |||||||||||||| |||| ||||||||| |||| ||||||||  ||| ||||||  ||||| ||||||||||||||||||| |||    
T  13743552 aatttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctctt 13743651  T
Q  163 cagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 262  Q
    || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  13743652 cataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtct 13743750  T
Q  263 cacccttaccttagtttt 280  Q
    ||||||||||||||||||    
T  13743751 cacccttaccttagtttt 13743768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 84 - 280
Target Start/End: Complemental strand, 12590832 - 12590639
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| ||||||||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  12590832 acagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 12590735  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12590734 actttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 12590639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 84 - 280
Target Start/End: Original strand, 13007299 - 13007491
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  13007299 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 13007395  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13007396 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 13007491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 273
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  79 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaa 178  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||||||   | ||| |||||||||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  179 tcctaaccctcaattt-attttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
     ||||||||| ||||| || |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 273
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  79 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaa 178  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||||||   | ||| |||||||||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  179 tcctaaccctcaattt-attttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
     ||||||||| ||||| || |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 20311107 - 20311051
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttag 20311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 21231015 - 21230959
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 21230959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 275
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  212 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 831669 - 831629
Alignment:
Q  240 ttatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagtttt 831629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 1196849 - 1196809
Alignment:
Q  240 ttatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagtttt 1196809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 34958578 - 34958618
Alignment:
Q  240 ttatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagtttt 34958618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  224 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 228; Significance: 1e-126; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 12125 - 11846
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  12125 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagat 12026  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  12025 taagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttc 11926  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11925 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 111468 - 111741
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  111468 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 111566  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| |||||||||||||||||||||    
T  111567 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttc 111665  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111666 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 216; Significance: 1e-118; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 14763032 - 14762746
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| | |||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  14763032 acaacaattacagatcactccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 14762933  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  14762932 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 14762833  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 288  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  14762832 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta-atttagaagaaa 14762746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 38311074 - 38310802
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||| ||||||||||||||||| ||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  38311074 acaacaattacagatcattccaccttcatacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 38310975  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  38310974 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 38310875  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38310874 caaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 20248055 - 20247791
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||| |        |||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  20248055 acaacaattacagatcattccaccatcatacacaaattcatcca--------atcactcataattttcaatcaatttatgatcacagcagcaacaaagat 20247964  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  20247963 taagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 20247864  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247863 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 12 - 273
Target Start/End: Original strand, 24192747 - 24193009
Alignment:
Q  12 agattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgat-cacagcaacaacaaagattaagttttca 110  Q
    |||| |||||||||||||||  | ||||||||||| ||| ||||| |||||  ||||||||| | |||||| |||||||||| || ||||||||||||||    
T  24192747 agatcattccaccatcataccaatattcatcaatttatccaatcaatcatat-tttcaatcagtttatgattcacagcaacagcatagattaagttttca 24192845  T
Q  111 ttctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc-aaaactaa 209  Q
    |||||||||| | |||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||     
T  24192846 ttctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat 24192945  T
Q  210 gcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192946 gcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 9534110 - 9534382
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||  |||||  | ||||    
T  9534110 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacgacaacagtatagat 9534208  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| | || |||||||||||||||| |||||||||||||||||||||    
T  9534209 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttc 9534307  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534308 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 23370779 - 23370505
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| | |||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  23370779 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 23370681  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| |||||||| |||||||| |||    
T  23370680 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 23370582  T
Q  201 caaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23370581 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 85 - 276
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  85 cagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaa 184  Q
    |||||||||||  ||||||| ||||||||| ||||||| ||| | ||  || || ||| ||| |||| ||||  || ||||||||||||||||| |||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaa 24933919  T
Q  185 ccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
       |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24933918 ttttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 273
Target Start/End: Complemental strand, 55499365 - 55499104
Alignment:
Q  12 agattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcat 111  Q
    |||| |||||||||||||||| || || ||||||| ||| ||||| | |||  ||||||||||| |||||||||||||||   | |||||||| ||||||    
T  55499365 agatcattccaccatcatacaaaacttgatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaactgtatagattaagatttcat 55499267  T
Q  112 tctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagc 211  Q
    || |||||| | |||||||   ||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||  |   |||   |||||    
T  55499266 tccgaacatcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagc 55499168  T
Q  212 aattaggtcaatttt-cagaaattatagattat-gattattgagagatagtctcacccttacct 273  Q
    | ||||||||||||| | ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  55499167 agttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 41455272 - 41455093
Alignment:
Q  98 gattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttatt 197  Q
    ||||||| |||||||||  |||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||  |||||   |||   ||||    
T  41455272 gattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaatccctaattttcatcctatt 41455175  T
Q  198 ttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455174 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 41455093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 16801602 - 16801463
Alignment:
Q  140 catgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaattatag 238  Q
    |||||||||||| |  ||| | ||| ||||||||||||  ||||||| ||||||| || ||| ||| ||||||||| ||||||||||||||||||||||     
T  16801602 catgatcattacaccattctcctcaaaatcatcatcaac-cctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaattatat 16801504  T
Q  239 attatgattattgagagatagtctcacccttaccttagtttt 280  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  16801503 at-atgattattgagagatagtctcacccttaccttagtttt 16801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  214 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  162 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 261  Q
    ||||||||||||||||| |||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  262 tcacccttaccttag 276  Q
     ||||||||||||||    
T  10389457 ccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  162 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 261  Q
    ||||||||||||||||| |||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  262 tcacccttaccttag 276  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  162 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 261  Q
    ||||||||||||||||| |||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  262 tcacccttaccttag 276  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 276
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  241 tatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  240 ttatgattattgagagatagtctcacccttaccttag 276  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 960 - 1237
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||| |||    
T  960 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gat 1058  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  1059 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttc 1158  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1159 caaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 49961 - 50238
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||| |||    
T  49961 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gat 50059  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  50060 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttc 50159  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50160 caaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 50238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 2 - 280
Target Start/End: Complemental strand, 8046105 - 8045828
Alignment:
Q  2 caacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagatt 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  8046105 caacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggatt 8046006  T
Q  102 aagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc 201  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||| |||||||||||||||||||||  || ||||| ||||||||||||||||||||||    
T  8046005 aagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttcc 8045906  T
Q  202 aaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8045905 aaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 8045828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 11847888 - 11848173
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  11847888 acaacaattacagatcattccatcatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagat 11847987  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaa------ttt 194  Q
    ||||||||||||||||||||||||||| ||  | |||| ||||||||||||||||| | |||||||||| |||||||| ||||||||||||      ||     
T  11847988 taagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgatttta 11848087  T
Q  195 attttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||| |||||||| || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848088 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 11848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 276
Target Start/End: Original strand, 53483646 - 53483760
Alignment:
Q  162 tcagaatcatcatcaaatcctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 260  Q
    ||||||||||||||||| |||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagt 53483744  T
Q  261 ctcacccttaccttag 276  Q
    ||||||||||||||||    
T  53483745 ctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 15408139 - 15408195
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 15408195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 270  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 15747592 - 15747552
Alignment:
Q  240 ttatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagtttt 15747552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 27906266 - 27906321
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  245 attattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  245 attattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 201; Significance: 1e-109; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 29614421 - 29614142
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  29614421 acaacacttacagattattccaccatcatacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagat 29614322  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaattta-tttt 199  Q
    |||||||||||||| ||||||  | |||||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  29614321 taagttttcattctaaacatt-caatacaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttattttt 29614223  T
Q  200 ccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614222 ccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 29614142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 42 - 288
Target Start/End: Original strand, 23057760 - 23058005
Alignment:
Q  42 caattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatca 141  Q
    ||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  142 tgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatt 241  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  242 atgattattgagagatagtctcacccttaccttagttttagaagaaa 288  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta-atttagaagaaa 23058005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 23838980 - 23839303
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  23838980 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 23839078  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||||||||||| |||||||  |||||| |||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||| |||    
T  23839079 taagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttc 23839177  T
Q  201 caaa-actaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacg 297  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    ||| ||| |||||||     
T  23839178 caaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaaca 23839277  T
Q  298 accggattctctgactctacttgttc 323  Q
    | ||||||||||||||| ||||||||    
T  23839278 atcggattctctgactccacttgttc 23839303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 12 - 280
Target Start/End: Original strand, 18800230 - 18800497
Alignment:
Q  12 agattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcat 111  Q
    |||| |||||||||||||||  || |||||||||| ||| ||||| | |||  ||||||||||| | |||||||| |||||| | |||||||| ||||||    
T  18800230 agatcattccaccatcataccaaacttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacaacaacaatatagattaagatttcat 18800328  T
Q  112 tctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatt-tattttccaaaactaag 210  Q
    | ||||||| | |||||||  |||||| |||||||||||| |||| |||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18800329 tttgaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaag 18800427  T
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18800428 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagtttt 18800497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 10986454 - 10986180
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| | |||||||||||||| |  |||||||||| ||| ||||| || ||| ||||||||||| |||||||||| |||||  | ||||    
T  10986454 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagat 10986356  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||||||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| |||    
T  10986355 taagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 10986257  T
Q  201 caaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10986256 caaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttag 10986180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 4477639 - 4477912
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| | |||||||||||||| |  || ||||| | ||| ||||| |||||| ||||||||||| |||||||||| |||||| | ||||    
T  4477639 acaacaaatacagatcactccaccatcatacaaatctttatcaaatcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagat 4477737  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| |||||||| |||||||| |||    
T  4477738 taagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 4477836  T
Q  201 caaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477837 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 141 - 280
Target Start/End: Complemental strand, 930229 - 930091
Alignment:
Q  141 atgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagat 240  Q
    |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  241 tatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagtttt 930091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 273
Target Start/End: Complemental strand, 21565474 - 21565214
Alignment:
Q  12 agattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcat 111  Q
    |||| |||||||||||||||| || |||||||||| ||| ||||| | |||  ||||||||||| ||||||||||||||||  | |||||||| ||||||    
T  21565474 agatcattccaccatcatacagaacttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaacagtatagattaagatttcat 21565376  T
Q  112 tctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagc 211  Q
    || |||| | | |||||||   ||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||  |   |||   |||||    
T  21565375 tccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagc 21565277  T
Q  212 aattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 273  Q
    |||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  21565276 aattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 84 - 280
Target Start/End: Original strand, 12168230 - 12168422
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  12168230 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 12168326  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12168327 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 12168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 84 - 280
Target Start/End: Original strand, 19287139 - 19287331
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  19287139 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 19287235  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19287236 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 19287331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 84 - 280
Target Start/End: Complemental strand, 19786057 - 19785865
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  19786057 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 19785961  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||  ||| |||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19785960 actttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 19785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 84 - 280
Target Start/End: Original strand, 19878323 - 19878515
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  19878323 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 19878419  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19878420 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 19878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 84 - 280
Target Start/End: Original strand, 19884099 - 19884291
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  19884099 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 19884195  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19884196 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccctaaccttagtttt 19884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 34640069 - 34639986
Alignment:
Q  193 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 34646743 - 34646660
Alignment:
Q  193 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34646743 ttattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  162 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 261  Q
    ||||||| ||||||||| |||||   |||  |||||||||||||| |  ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  262 tcacccttaccttag 276  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 24512899 - 24512843
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttag 24512843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 25397172 - 25397261
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag--aaacgcacaacgaccggattct 307  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||  || |||||  ||||||||||||| ||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta-attcagaagaaaaacgcacaacgatcggattct 25397261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 31252413 - 31252478
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 11288758 - 11288668
Alignment:
Q  187 ctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||||| | |||||  |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288758 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  241 tatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  241 tatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 276
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  248 attgagagatagtctcacccttaccttag 276  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 1008 - 746
Alignment:
Q  18 ttccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaa 117  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| | |||||||||| ||||||||| ||||||||||| || |||||    
T  1008 ttccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaa 910  T
Q  118 cattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc-aaaactaagcaatta 216  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||| |||||||    
T  909 cattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaatta 810  T
Q  217 ggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  809 ggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 56 - 280
Target Start/End: Original strand, 111717 - 111942
Alignment:
Q  56 attcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccat 155  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  111717 attcatcaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccat 111816  T
Q  156 ttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttcagaaattatagattatgattattgaga 254  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  111817 ttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgaga 111916  T
Q  255 gatagtctcacccttaccttagtttt 280  Q
    ||||||||||||||||||||||||||    
T  111917 gatagtctcacccttaccttagtttt 111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 111682 - 111727
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaatt 46  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||    
T  111682 acaacaattacagatcattccaccatcatacacaaattcatcaatt 111727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 170; Significance: 4e-91; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 2171 - 1893
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||| ||  ||||| |||| ||||||||||||  |||||||||||||||||||| |||    
T  2171 acaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggat 2072  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||| ||||||||| |||||||| |||||| ||| |||||||||||||  || ||| ||||||||||||| |||||||||||| ||||||||    
T  2071 taagttttcattatgaacattaaattacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttc 1974  T
Q  201 caaaactaagcaattaggtcaa-ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1973 caaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagtttt 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 8848 - 8570
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||| ||  ||||| | || ||||||||||||  |||||||||||||||||||| |||    
T  8848 acaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggat 8749  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||| ||||||||| |||||||| |||||| ||| |||||||||||||  || ||| ||||||||||||| |||||||||||| ||||||||    
T  8748 taagttttcattttgaacattaaattacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttc 8651  T
Q  201 caaaactaagcaattaggtcaa-ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8650 caaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagtttt 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 166; Significance: 9e-89; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 14670 - 14398
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||  | ||||||||||| ||| ||||| |||||  ||||||||| | |||||||||||||||| || ||||    
T  14670 acaacaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatat-tttcaatcagtttatgatcacagcaacagcatagat 14572  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    ||||||||||||| |||||| | |||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  14571 taagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 14472  T
Q  201 c-aaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14471 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 4e-88; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 2 - 280
Target Start/End: Original strand, 23866396 - 23866674
Alignment:
Q  2 caacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaa-tcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||| ||| | || ||||| ||||||||||| |||    
T  23866396 caacaatcacagattattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaacaa-gat 23866494  T
Q  101 taagttttcattctgaacattatattacaagg-gaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttatttt 199  Q
    |||||||  |||||||||||||||||||||   |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  23866495 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 23866594  T
Q  200 ccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23866595 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 23866674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 8728007 - 8727735
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  8728007 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagat 8727908  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||||||||||| |||||||  |||||| |||||||| |||||| | ||| ||||||||||| ||||| ||||||||||||||||| |||    
T  8727907 taagttttcattctgaacattacattacaacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttc 8727809  T
Q  201 c-aaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8727808 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 44477405 - 44477678
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  44477405 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 44477503  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| |||||||  ||||||  |||||| |||||||| |||||||| |||| || ||||||||||||| |||||||||||||||||||||    
T  44477504 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 44477602  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477603 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 44492563 - 44492836
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  44492563 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 44492661  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| |||||||  ||||||  |||||| |||||||| |||||||| |||| || ||||||||||||| |||||||||||||||||||||    
T  44492662 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 44492760  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492761 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 84 - 280
Target Start/End: Original strand, 17054458 - 17054650
Alignment:
Q  84 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 183  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  17054458 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 17054554  T
Q  184 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17054555 actttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttggtttt 17054650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 27941127 - 27940946
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| ||||||| | |||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||| | |||||  | ||||    
T  27941127 acaacaaatatagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcataacaacagtatagat 27941029  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaa 184  Q
    ||| |||||||||||||||||| |||||||  |||||| |||||||| |||||| ||||| ||||||||||||||||| |||||    
T  27941028 taaattttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 330
Target Start/End: Original strand, 18614271 - 18614382
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctctgactctac 317  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  |||||||| |||||||||| || ||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta-atttagaagaaaacgcacaatgatcggattctctgactctac 18614369  T
Q  318 ttgttcatctcac 330  Q
    |||||| ||||||    
T  18614370 ttgttcttctcac 18614382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 323
Target Start/End: Complemental strand, 23482117 - 23482003
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctc 308  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    ||| ||| ||||||| | |||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctc 23482018  T
Q  309 tgactctacttgttc 323  Q
    |||||| | ||||||    
T  23482017 tgactccagttgttc 23482003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 29643440 - 29643374
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 288  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||  |||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta-atttagaagaaa 29643374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 14056619 - 14056563
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttag 14056563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 25111976 - 25112032
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttag 25112032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 27940907 - 27940847
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagtttt 27940847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 6e-87; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 20437297 - 20436974
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  20437297 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 20437199  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||||||||||| |||||||   ||||| |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| |||    
T  20437198 taagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 20437100  T
Q  201 caaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacg 297  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    ||| ||| |||||||     
T  20437099 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaaca 20437000  T
Q  298 accggattctctgactctacttgttc 323  Q
    | ||||||||||||||| ||||||||    
T  20436999 atcggattctctgactccacttgttc 20436974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 41111977 - 41112094
Alignment:
Q  162 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 261  Q
    ||||||||||||||||| ||||||  |||  ||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 41112075  T
Q  262 tcacccttaccttagtttt 280  Q
    |||||||||||||||||||    
T  41112076 tcacccttaccttagtttt 41112094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 211 - 330
Target Start/End: Original strand, 32651563 - 32651682
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctct 309  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||| ||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 32651661  T
Q  310 gactctacttgttcatctcac 330  Q
    ||||| |||||||| ||||||    
T  32651662 gactccacttgttcttctcac 32651682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  245 attattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  245 attattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  241 tatgattattgagagatagtctcacccttacctt 274  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  241 tatgattattgagagatagtctcacccttacctt 274  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 8e-83; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 19661726 - 19661442
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| | |||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||| | ||||    
T  19661726 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagat 19661628  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| |||    
T  19661627 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 19661529  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 288  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||    
T  19661528 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta-atttagaagaaa 19661442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 6483500 - 6483772
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| |||  |||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  6483500 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 6483598  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| |||||||  ||||||  |||||| |||||||| |||||||| |||| || ||||||||||||| |||||||||||||||||||||    
T  6483599 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 6483697  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483698 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 6486967 - 6487239
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| |||||||||||||||| |  |||||||||| |||  |||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  6486967 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 6487065  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| |||||||  ||||||  |||||| |||||||| |||||||| |||| || ||||||||||||| |||||||||||||||||||||    
T  6487066 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 6487164  T
Q  201 caaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487165 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 79 - 280
Target Start/End: Original strand, 26583687 - 26583886
Alignment:
Q  79 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaa 178  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||||||   | ||| |||||||||||||| |||||| ||||||||||||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaag 26583785  T
Q  179 tcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtt 278  Q
     ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaactatgcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtt 26583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 273
Target Start/End: Complemental strand, 23089317 - 23089057
Alignment:
Q  12 agattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcat 111  Q
    |||| |||||||||||||||| || |||||||||| ||| ||||| | |||  ||||||||||| ||||||||||||||||  | |||||||| ||||||    
T  23089317 agatcattccaccatcatacagaacttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaacagtatagattaagatttcat 23089219  T
Q  112 tctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagc 211  Q
    || |||| | | |||||||   ||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||  |   |||   |||||    
T  23089218 tccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagc 23089120  T
Q  212 aattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 273  Q
    |||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  23089119 aattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 273
Target Start/End: Original strand, 23878801 - 23879060
Alignment:
Q  12 agattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcat 111  Q
    |||| |||||||||||||||| || |||||||||| ||| ||||| |  ||  ||||||||||| |||||||||| |||||  | |||||||| ||||||    
T  23878801 agatcattccaccatcatacaaaacttcatcaattcatccaatcaattctat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcat 23878899  T
Q  112 tctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagc 211  Q
    ||||||||| | |||||||   ||||| ||||||||||||||  ||||| |||||||||||| | || |||||||||||||||| |   |||   |||||    
T  23878900 tctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcctcaaggttaagc 23878998  T
Q  212 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    |||||||||||||||  ||||||||| || || |||| ||||||||||||||||||||||||    
T  23878999 aattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 275
Target Start/End: Complemental strand, 23101720 - 23101463
Alignment:
Q  17 attccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctga 116  Q
    |||||||||||||||| || ||||| |||| ||| ||||| | |||  ||||||||||| |||||||||| |||||  | |||||||| |||||||| ||    
T  23101720 attccaccatcatacagaacttcatgaattcatccaatcaattatat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccga 23101622  T
Q  117 acattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaatta 216  Q
    || | | |||||||   ||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||  |   |||   ||| ||||||    
T  23101621 acgtcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaaacaatta 23101523  T
Q  217 ggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacctta 275  Q
    ||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||||    
T  23101522 ggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  162 tcagaatcatcatcaaatcctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 260  Q
    ||||||||||||||||| |||||   ||| |||  ||||| |||||||  |||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  261 ctcacccttaccttag 276  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  214 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 26885183 - 26885237
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||    
T  26885183 aattttcagaaattatacatta-gattattgaaagataatcccacccttaccttag 26885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 23168351 - 23168298
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttag 23168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 23579608 - 23579555
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttag 23579555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 11141 - 11401
Alignment:
Q  19 tccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaac 118  Q
    |||||||||||||| || |||||||||| ||| ||||| | |||  ||||||||||| | ||||||||||||||  |  ||||||| ||||||| |||||    
T  11141 tccaccatcatacaaaacttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaac 11239  T
Q  119 attatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatt-tattttccaaaactaagcaattag 217  Q
    || | |||||||  |||||| |||||||||||| |||| |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11240 atcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattag 11338  T
Q  218 gtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11339 gtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 10469 - 10195
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| | |||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  10469 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 10371  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| |||||||| |||||||| |||    
T  10370 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 10272  T
Q  201 caaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10271 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 1799 - 1525
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    ||||||| || |||| | |||||||||||||| |  |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | ||||    
T  1799 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagat 1701  T
Q  101 taagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttc 200  Q
    |||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| |||| |||||||||||||||| |||||||| |||||||| |||    
T  1700 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 1602  T
Q  201 caaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1601 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 280
Target Start/End: Original strand, 75 - 350
Alignment:
Q  2 caacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagatt 101  Q
    |||||| || |||| | |||||||| |||||   ||||||||||| ||| || || |||||| |||||| |||| |||||||||| ||| |||| |||||    
T  75 caacaaatacagatcactccaccattatacaattattcatcaatttatccaaccaatcataa-tttcaaccaatttatgatcacatcaataacatagatt 173  T
Q  102 aagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc 201  Q
    |||| |||| ||||||||  ||| ||||||  ||||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  174 aagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttcc 272  T
Q  202 aaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  273 aaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctcacccttaccttagtttt 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 138; Significance: 5e-72; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 17950 - 18229
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| ||  |||||||||||| | ||||||||||| ||| ||||| ||  ||||||||||||||  |||||||||||||||||| || |    
T  17950 acaacaattacagatcatcacaccatcatacaaatattcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggt 18048  T
Q  101 taagttttcattctgaacattatattacaagg-gaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttatttt 199  Q
    ||||||||||||||| |||| | |||||||   |||||| ||||| ||||||| ||||||| | ||||||||||| ||| | ||||||||||||||||||    
T  18049 taagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttatttt 18147  T
Q  200 ccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18148 cctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagtttt 18229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 116; Significance: 6e-59; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 193 - 328
Target Start/End: Original strand, 8049 - 8184
Alignment:
Q  193 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 292  Q
    |||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 8148  T
Q  293 caacgaccggattctctgactctacttgttcatctc 328  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8149 caacgaccggattctctgactctacttgttcttctc 8184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 193 - 328
Target Start/End: Original strand, 904 - 1039
Alignment:
Q  193 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 292  Q
    |||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 1003  T
Q  293 caacgaccggattctctgactctacttgttcatctc 328  Q
    ||||||||||||||||||||| ||||||||| ||||    
T  1004 caacgaccggattctctgactatacttgttcttctc 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 806 - 899
Alignment:
Q  36 attcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaa 130  Q
    ||||||||||| ||| ||||  |||||| || |||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  806 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 7951 - 8044
Alignment:
Q  36 attcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaa 130  Q
    ||||||||||| ||| ||||  |||||| || |||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  7951 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 273
Target Start/End: Complemental strand, 3556 - 3295
Alignment:
Q  12 agattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcat 111  Q
    |||| |||||||||||||||| || |||||||||| ||| ||||| | |||  ||||||||||| | ||||||||||||||  | |||||||| ||||||    
T  3556 agatcattccaccatcatacaaaacttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatagattaagatttcat 3458  T
Q  112 tctgaacattatattacaagggaattatcatga-tcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaag 210  Q
    ||||||||| | |||||||   ||||| ||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||  |  ||||   ||||    
T  3457 tctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatccccaaggttaag 3359  T
Q  211 caattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 273  Q
    ||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3358 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 280
Target Start/End: Original strand, 30792 - 30917
Alignment:
Q  156 ttcccttcagaatcatcatcaaatcctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgaga 254  Q
    ||||| ||| ||||||||||||| ||||| ||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30792 ttcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgaga 30891  T
Q  255 gatagtctcacccttaccttagtttt 280  Q
    ||||||||||||||||||||||||||    
T  30892 gatagtctcacccttaccttagtttt 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 3879 - 3624
Alignment:
Q  17 attccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctga 116  Q
    |||||||||||||||| || |||||||||| ||| ||||| | |||  ||||||||||| |||||||||| |||||  | |||||||| |||||||| ||    
T  3879 attccaccatcatacaaaacttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccga 3781  T
Q  117 acattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaatta 216  Q
    |||| | |||||||   ||||| ||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||  |   |||   ||||||||||    
T  3780 acatcacattacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaatta 3682  T
Q  217 ggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 273  Q
    ||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3681 ggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3443 - 3558
Alignment:
Q  1 acaacaattatagattattccaccatcatacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagat 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  3443 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagat 3542  T
Q  101 taagttttcattctga 116  Q
    ||||||||||||||||    
T  3543 taagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 85 - 280
Target Start/End: Complemental strand, 1920 - 1728
Alignment:
Q  85 cagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaa 184  Q
    |||||||| ||  ||||||| ||||||||| ||||||| ||| | ||  || || ||| ||| |||| ||||  || ||||||||||||||||| |||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  185 ccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |  |||  ||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 85 - 280
Target Start/End: Complemental strand, 5943 - 5751
Alignment:
Q  85 cagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaa 184  Q
    |||||||| ||  ||||||| ||||||||| ||||||| ||| | ||  || || ||| ||| |||| ||||  || ||||||||||||||||| |||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  185 ccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |  |||  ||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtttt 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 116887 - 116998
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctct 309  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||| ||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 116985  T
Q  310 gactctacttgtt 322  Q
    ||||| |||||||    
T  116986 gactccacttgtt 116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  241 tatgattattgagagatagtctcacccttacctt 274  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45386 - 45274
Alignment:
Q  164 agaatcatcatcaaatcctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 262  Q
    ||||||||||||||| |||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  263 cacccttaccttag 276  Q
    ||||||||||||||    
T  45287 cacccttaccttag 45274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 17643 - 17699
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttag 17699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 40587 - 40531
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 40531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 135473 - 135529
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 135529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 15052 - 14944
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctc-tgactctac 317  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||   ||||||| ||||||||||||| ||||||| | || ||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta--attagaagaaaacgcacaacgatcggattcccttggctctac 14955  T
Q  318 ttgttcatctc 328  Q
    |||||| ||||    
T  14954 ttgttcttctc 14944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 22646 - 22594
Alignment:
Q  222 attttcagaaattatagattatgattattgagagatagtctcacccttacctt 274  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  220 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

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Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 275
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  212 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0815 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 1453 - 1509
Alignment:
Q  224 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaatttt 1509  T

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Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 279  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 69749 - 69855
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctc-tgactctacttg 320  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||  |||||||| |||||| |||||| || |||||| || |||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta-atttagaagaaaacgcgcaacgatcgaattctcttggctctacttg 69847  T
Q  321 ttcatctc 328  Q
    ||| ||||    
T  69848 ttcttctc 69855  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 493082 - 493028
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttaccttag 493028  T

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Target: scaffold2054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 680 - 774
Alignment:
Q  187 ctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 280  Q
    |||||||||||||| | |||||  |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagtttt 774  T

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Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0610 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 6540 - 6609
Alignment:
Q  261 ctcacccttaccttagttttagaagaaa-cgcacaacgaccggattctctgactctacttgttcatctcac 330  Q
    ||||||||||||||| ||| |||||||| |||||||||| || |||||||| |||||||||||| ||||||    
T  6540 ctcacccttaccttaattt-agaagaaaacgcacaacgatcgaattctctggctctacttgttcttctcac 6609  T

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Target: scaffold0609 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 5922 - 5857
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 23624 - 23569
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttag 23569  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

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Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 79125 - 79057
Alignment:
Q  242 atgattattgagagatagtctcacccttaccttagttttagaag--aaacgcacaacgaccggattctct 309  Q
    ||||| |||||||| ||| |||||||||||||||  ||||||||  ||||||||||||| ||||||||||    
T  79125 atgatcattgagagttagcctcacccttacctta-atttagaagaaaaacgcacaacgatcggattctct 79057  T

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Target: scaffold0790 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 5480 - 5513
Alignment:
Q  247 tattgagagatagtctcacccttaccttagtttt 280  Q
    |||||| |||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagtttt 5513  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  229 gaaattatagattatgattattgagagatagtctcacccttacctt 274  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 13947 - 13894
Alignment:
Q  223 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 732 - 788
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  226 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 275  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  221 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 273  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  219 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 275  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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