View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17611_high_17 (Length: 344)
Name: NF17611_high_17
Description: NF17611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17611_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 20670861 - 20670538
Alignment:
| Q |
1 |
atcaagggtgaaattaccggggaagttatcggtaacggtgatggttttaccggggagaagagtaggtatacgagagtaacgagggaggaggaggaggtca |
100 |
Q |
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| T |
20670861 |
atcaagggtgaaattaccggggaagttatcggtaacggtgatggttttaccggggagaagagtagggatacgagagtaacgagggaggaggaggaggtca |
20670762 |
T |
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| Q |
101 |
gtgtagacgagacgttgagggatgatatgatatggaaaagtgaaggggtttaatgtagaggaagatggtaagggttgttgagggatgaagagtgttaggc |
200 |
Q |
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| T |
20670761 |
gcgtagacgagacgttgagggatgatatgatatggaaaagtgaaggggtttaatgtagaggaagatggtaagggttgttgaggaatgaagagtgttaggc |
20670662 |
T |
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| Q |
201 |
taagtgatggatgtgagattgataagatgcttacccatttgtttacgcttgtgtctcctgatcctattagtgcatcaagaatgttgttcatttcttgcat |
300 |
Q |
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| T |
20670661 |
taagtgatggatgggagattgataagatgcttacccatttgtttatgcttgtgtctcctgatcctattagtgcatcaagaatgttgttcatttcttgcat |
20670562 |
T |
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| Q |
301 |
tgccaatggtggagttgatgatgt |
324 |
Q |
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| T |
20670561 |
tgccaatggtggagttgatgatgt |
20670538 |
T |
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